Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	HLTF	Gene	0	34.73	12.27	45.72	22.47	61.15	40.95
2	392913	Transcript	0	0.51	0.00	0.00	0.00	0.00	0.00
3	494055	Transcript	0	0.00	0.00	0.00	0.00	7.99	0.00
4	310053	Transcript	0	0	0	0	0	0	0
5	465259	Transcript	0	3.25	0.00	9.51	14.79	14.07	57.17
6	481663	Transcript	0	0.00	0.76	0.79	0.00	0.00	0.00
7	392912	Transcript	1	34.35	0.00	43.89	8.92	67.67	15.70
8	493881	Transcript	0	2.67	1.05	2.43	0.00	4.12	6.54
9	467858	Transcript	0	2.77	0.00	24.31	5.27	0.00	0.00
10	483382	Transcript	0	0	0	0	0	0	0
11	471807	Transcript	0	0	0	0	0	0	0
12	497427	Transcript	0	1.13	0.00	4.11	0.04	0.00	0.00
13	472830	Transcript	0	1.89	0.10	6.91	2.59	2.05	0.25
14	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
15	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
16	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
17	E1_Ae	KnownBoundary	0	0.00	0.00	0.00	2.61	0.00	0.00
18	ER1b	ExonRegion	0	0.00	0.00	0.00	0.54	0.00	0.00
19	ER1c	ExonRegion	0	0.00	0.00	9.97	6.34	0.00	0.00
20	ER1d	ExonRegion	0	0.00	0.00	10.86	6.46	0.00	0.00
21	ER1e	ExonRegion	1	5.08	0.24	16.08	7.78	2.94	21.68
22	E1a_E2a	KnownJunction	0	3.07	2.98	53.57	13.38	0.00	18.39
23	ER2a	ExonRegion	1	7.39	3.04	57.32	24.93	7.91	32.46
24	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
25	E2a_E4a	KnownJunction	0	6.03	2.98	47.02	13.48	17.90	35.68
26	ER3a	ExonRegion	0	0.00	1.52	1.59	0.00	0.00	0.00
27	ER4a	ExonRegion	1	13.17	6.34	53.53	32.84	10.56	78.44
28	E4a_E5a	KnownJunction	1	9.34	0.00	34.78	38.17	45.36	233.73
29	ER5a	ExonRegion	1	8.02	3.35	46.97	31.04	7.38	44.46
30	E5a_E6a	KnownJunction	0	14.46	10.24	28.58	26.64	0.00	4.28
31	ER6a	ExonRegion	0	7.73	8.31	58.35	34.71	1.33	10.13
32	E6a_E7a	KnownJunction	0	6.33	0.00	91.02	42.52	10.32	37.44
33	E7_Aa	NovelBoundary	0	0.00	0.00	9.68	8.16	0.00	0.00
34	ER7a	ExonRegion	0	15.26	4.96	132.44	55.52	3.09	6.42
35	E7a_E8a	KnownJunction	0	23.62	19.85	69.62	47.41	9.07	9.57
36	ER8a	ExonRegion	0	13.03	6.41	102.75	60.79	4.79	14.48
37	E8a_E9a	KnownJunction	0	29.71	9.39	78.50	55.41	8.66	18.47
38	I8_SR2	SilentIntronRegion	0	7.15	1.17	3.09	0.29	31.09	11.33
39	ER9a	ExonRegion	0	11.11	4.70	71.85	39.09	1.96	10.70
40	E9_Da	NovelBoundary	0	3.74	3.04	15.43	6.14	3.58	5.21
41	E9a_E10a	KnownJunction	0	0.00	6.36	76.39	48.50	4.49	4.11
42	I9	Intron	0	2.01	0.22	9.27	2.58	27.03	14.56
43	I9_SR1	SilentIntronRegion	0	2.20	0.32	5.81	1.65	38.56	20.95
44	I9_AR2	ActiveIntronRegion	0	1.85	0.00	21.58	7.47	1.62	0.00
45	I9_AR3	ActiveIntronRegion	0	1.60	0.00	17.30	1.63	0.69	0.70
46	E10_Aa	NovelBoundary	0	0.00	0.00	34.67	14.19	3.83	0.00
47	ER10a	ExonRegion	0	4.03	2.68	72.21	29.90	1.78	5.77
48	E10_Da	NovelBoundary	0	9.52	0.00	32.56	2.50	0.00	0.00
49	E10a_E11a	KnownJunction	0	10.48	6.41	36.60	24.79	4.58	14.44
50	I10	Intron	0	2.54	1.19	9.23	5.74	1.26	1.17
51	I10_SR1	SilentIntronRegion	0	2.57	1.20	9.33	5.80	1.27	1.18
52	ER11a	ExonRegion	1	15.99	4.60	93.14	59.10	4.89	19.46
53	E11a_E13a	KnownJunction	1	3.43	0.00	32.85	18.49	27.88	132.23
54	ER12a	ExonRegion	0	0.51	0.00	0.00	0.00	0.00	0.00
55	ER13a	ExonRegion	1	12.17	4.72	45.77	28.44	13.82	81.96
56	E13a_E14a	KnownJunction	0	20.49	6.86	70.42	55.51	12.98	39.38
57	ER13b	ExonRegion	1	17.70	5.24	54.21	41.85	8.35	40.02
58	ER14a	ExonRegion	1	10.56	1.80	44.95	39.83	9.96	42.13
59	E14a_E15a	KnownJunction	1	0.00	0.00	10.30	13.43	8.32	94.53
60	E14a_E15b	KnownJunction	0	3.25	0.00	9.51	14.79	14.07	57.17
61	ER15a	ExonRegion	1	2.64	0.00	17.92	20.47	7.23	54.61
62	ER15b	ExonRegion	1	6.04	7.54	56.71	32.61	5.26	42.60
63	E15a_E16a	KnownJunction	0	6.09	7.93	98.77	50.40	0.00	8.82
64	ER16a	ExonRegion	0	7.07	3.07	42.21	24.25	1.40	8.01
65	E16a_E17a	KnownJunction	0	0.00	0.00	2.79	0.00	0.00	0.00
66	E16a_E18a	KnownJunction	0	3.49	0.00	14.23	15.77	0.00	3.53
67	E17_Aa	NovelBoundary	0	105.45	77.22	26.87	5.44	70.67	89.83
68	ER17a	ExonRegion	0	8.02	3.14	4.50	0.00	12.37	19.62
69	E17_Da	NovelBoundary	0	24.70	33.52	23.28	3.15	13.98	5.21
70	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
71	I17	Intron	0	8.86	1.87	5.53	2.74	0.14	0.00
72	I17_SR1	SilentIntronRegion	0	8.86	1.87	5.54	2.74	0.14	0.00
73	ER18a	ExonRegion	0	10.72	7.51	66.45	31.87	2.32	1.78
74	E18_Da	KnownBoundary	0	2.77	12.54	16.05	12.18	17.40	14.36
75	ER18b	ExonRegion	0	4.29	5.06	31.86	15.65	5.42	5.92
76	E18b_E19a	KnownJunction	0	6.93	0.00	53.68	22.24	8.91	15.87
77	ER18c	ExonRegion	0	4.22	0.00	48.34	17.23	5.42	6.02
78	ER19a	ExonRegion	0	7.37	7.53	53.81	26.52	1.34	4.79
79	E19a_E20a	KnownJunction	0	10.12	11.98	45.31	40.67	11.65	25.77
80	ER20a	ExonRegion	0	12.25	8.04	77.35	36.73	4.81	9.39
81	E20a_E21a	KnownJunction	0	22.11	5.85	87.04	46.60	5.16	29.97
82	ER21a	ExonRegion	0	16.33	3.85	64.44	44.54	5.53	7.89
83	E21_Ab	KnownBoundary	0	22.78	3.04	60.17	62.15	17.06	5.21
84	ER21b	ExonRegion	0	16.61	5.29	90.63	56.70	5.39	4.99
85	E21_Ac	KnownBoundary	0	10.42	8.61	135.82	51.06	0.00	9.49
86	ER21c	ExonRegion	0	13.35	7.82	87.35	39.92	3.78	5.72
87	E21_Da	NovelBoundary	0	13.62	6.75	21.29	18.00	12.57	14.61
88	E21a_E22b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
89	E21b_E22a	KnownJunction	0	18.56	9.11	40.08	12.23	10.24	13.43
90	ER21d	ExonRegion	0	15.71	5.24	54.14	23.18	5.42	5.26
91	I21_AR1	ActiveIntronRegion	0	0.00	2.08	11.79	4.31	0.00	0.00
92	E22_Ab	NovelBoundary	1	23.62	0.00	46.22	17.89	0.00	9.57
93	ER22a	ExonRegion	0	16.82	4.16	38.96	16.80	3.62	4.69
94	ER22b	ExonRegion	0	21.91	4.05	101.97	46.10	1.67	7.02
95	E22a_E23b	KnownJunction	0	2.77	0.00	24.31	5.27	0.00	0.00
96	E22a_E23c	KnownJunction	0	20.25	6.30	110.72	49.37	0.00	17.38
97	ER23a	ExonRegion	0	1.13	0.00	4.11	0.04	0.00	0.00
98	E23_Ab	KnownBoundary	0	3.74	0.00	0.00	0.00	0.00	0.00
99	E23_Ac	KnownBoundary	0	0.00	0.00	15.94	7.67	0.00	0.00
100	ER23b	ExonRegion	0	7.04	0.52	35.30	12.03	0.15	0.77
101	ER23c	ExonRegion	0	18.86	5.59	84.47	37.36	5.67	12.58
102	E23b_E24b	KnownJunction	1	22.78	3.43	43.26	33.22	12.07	57.09
103	ER23d	ExonRegion	1	31.67	8.69	120.48	55.23	7.23	24.40
104	ER24a	ExonRegion	0	1.89	0.10	6.91	2.59	2.05	0.25
105	E24_Ab	KnownBoundary	0	0.00	0.00	8.08	2.61	13.48	0.00
106	ER24b	ExonRegion	1	26.99	11.28	60.36	43.24	16.53	37.95
107	ER24c	ExonRegion	1	27.33	9.31	70.77	35.78	16.98	75.49
108	E24_Db	KnownBoundary	1	31.75	10.86	88.80	22.40	17.23	157.33
109	ER24d	ExonRegion	1	25.85	6.23	102.07	42.29	15.35	51.15
110	E24c_E25a	KnownJunction	0	20.07	5.79	72.75	58.40	45.86	94.79
111	ER25a	ExonRegion	1	17.60	7.52	71.39	27.05	22.78	70.99
112	E25a_E26a	KnownJunction	1	39.05	9.45	181.19	48.61	41.20	151.04
113	ER26a	ExonRegion	1	12.89	5.10	56.35	17.47	25.77	103.35
114	E26a_E27a	KnownJunction	1	17.72	0.00	75.37	31.70	56.18	249.77
115	ER27a	ExonRegion	1	13.72	0.00	63.00	25.85	26.22	114.22
116	ER27b	ExonRegion	1	17.21	4.34	43.29	25.17	11.48	99.57
117	E27_Db	NovelBoundary	0	0.00	6.07	3.13	0.00	0.00	0.00
118	E27c_E28a	KnownJunction	1	25.01	10.12	31.48	12.83	13.57	279.41
119	ER27c	ExonRegion	1	23.22	8.73	30.42	18.10	13.74	99.97
120	ER28a	ExonRegion	0	45.30	8.07	92.53	41.71	38.53	28.83
121	E28_Da	KnownBoundary	0	14.22	19.29	10.59	4.95	25.30	3.95
122	E28a_E28b	KnownJunction	1	34.35	0.00	43.89	8.92	67.67	15.70
123	E28a_E28c	KnownJunction	0	0.00	0.00	0.00	0.00	7.99	0.00
124	ER28b	ExonRegion	0	14.32	5.44	26.55	14.51	24.98	7.86
125	E28_Ab	KnownBoundary	0	6.51	0.00	30.46	14.52	54.60	49.87
126	E28_Ac	KnownBoundary	1	5.84	4.84	20.49	0.00	14.82	18.89
127	ER28c	ExonRegion	1	45.04	6.23	60.83	19.39	84.98	34.56
128	ER28d	ExonRegion	1	61.28	15.61	30.38	18.54	146.07	48.54
129	E28_Db	KnownBoundary	1	103.76	35.55	42.81	9.19	495.58	160.02
130	ER28e	ExonRegion	0	145.85	47.96	37.84	12.25	193.08	80.72
131	E28_Dc	KnownBoundary	1	265.07	136.90	113.85	21.04	188.86	79.84
132	ER28f	ExonRegion	0	149.25	56.29	21.09	5.62	366.57	165.85