Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	CD47	Gene	0	14.37	7.62	35.87	12.75	35.32	17.79
2	398257	Transcript	0	0.00	0.00	0.00	0.00	0.80	0.00
3	398260	Transcript	0	13.33	6.52	7.10	1.40	217.78	95.68
4	355354	Transcript	0	0	0	0	0	0	0
5	361309	Transcript	0	0	0	0	0	0	0
6	398258	Transcript	0	0.10	0.00	0.00	0.00	6.08	0.00
7	471694	Transcript	0	12.53	6.72	25.73	9.77	6.82	3.84
8	IG34_AR6	ActiveIntergenicRegion	0	0.00	0.00	2.17	0.00	13.88	0.00
9	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
10	E1_Ab	KnownBoundary	0	0.00	0.00	3.47	0.00	0.00	0.00
11	E1_Ac	KnownBoundary	0	3.62	0.00	2.62	0.00	0.00	0.00
12	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
13	ER1c	ExonRegion	0	1.06	0.47	4.75	3.38	15.84	6.78
14	E1a_E2a	KnownJunction	1	6.27	3.49	37.40	12.83	218.66	72.45
15	I1_SR2	SilentIntronRegion	0	8.45	0.00	9.78	0.00	3.62	0.00
16	I1_AR2	ActiveIntronRegion	0	13.01	0.31	13.61	3.19	16.83	2.19
17	I1_SR3	SilentIntronRegion	0	0.17	0.73	9.10	2.06	1.17	0.00
18	I1_AR3	ActiveIntronRegion	0	0.30	0.42	9.29	4.11	1.85	0.09
19	I1_SR4	SilentIntronRegion	0	0.00	0.57	9.79	2.71	2.12	2.52
20	I1_AR4	ActiveIntronRegion	0	1.37	0.72	8.48	4.86	10.27	8.12
21	ER2a	ExonRegion	0	36.81	16.81	139.00	55.58	68.23	34.46
22	E2_Da	NovelBoundary	0	6.51	6.07	17.48	0.00	0.00	0.00
23	E2a_E3a	KnownJunction	0	34.83	28.69	226.34	61.82	147.41	81.69
24	I2_AR2	ActiveIntronRegion	0	7.81	0.00	28.62	11.04	0.00	0.00
25	I2_SR1	SilentIntronRegion	0	5.22	0.91	11.49	4.07	0.26	0.20
26	I2_AR3	ActiveIntronRegion	0	0.00	0.00	13.97	4.31	5.42	0.00
27	I2_AR4	ActiveIntronRegion	0	0.00	2.12	8.34	6.06	1.54	0.00
28	E3_Aa	NovelBoundary	0	0.00	3.49	2.85	3.10	21.72	3.53
29	ER3a	ExonRegion	0	38.24	31.93	184.95	61.35	77.02	61.67
30	E3_Da	NovelBoundary	0	3.01	0.00	36.83	22.46	35.87	8.06
31	E3a_E4a	KnownJunction	0	48.51	19.74	174.65	41.70	150.24	99.99
32	I3	Intron	0	8.95	2.59	16.30	4.81	53.68	18.08
33	I3_AR1	ActiveIntronRegion	1	1.00	0.00	19.90	10.12	40.06	8.76
34	I3_SR1	SilentIntronRegion	0	1.54	0.13	13.55	3.95	97.94	26.18
35	I3_AR2	ActiveIntronRegion	0	4.80	3.00	18.12	4.55	334.03	115.02
36	I3_SR2	SilentIntronRegion	0	2.73	1.36	17.13	4.43	0.11	0.13
37	I3_AR3	ActiveIntronRegion	0	5.95	0.76	7.55	6.95	2.92	3.49
38	I3_AR5	ActiveIntronRegion	0	6.35	2.01	26.83	8.74	9.59	0.99
39	I3_AR9	ActiveIntronRegion	1	4.72	4.16	11.95	1.65	10.85	0.00
40	I3_AR10	ActiveIntronRegion	1	17.85	3.15	22.15	7.15	14.01	0.36
41	I3_AR11	ActiveIntronRegion	1	14.08	8.54	16.72	8.74	23.96	2.93
42	I3_SR3	SilentIntronRegion	0	14.78	6.23	17.38	4.31	22.90	3.70
43	I3_AR12	ActiveIntronRegion	1	13.22	3.69	19.71	2.15	24.78	2.26
44	I3_AR13	ActiveIntronRegion	1	11.71	1.74	28.94	7.57	30.62	0.54
45	I3_SR4	SilentIntronRegion	1	18.47	5.45	29.33	6.46	36.84	0.00
46	I3_AR14	ActiveIntronRegion	1	18.40	6.23	28.09	6.46	36.68	0.00
47	I3_SR5	SilentIntronRegion	0	21.14	5.17	12.83	3.55	61.79	23.94
48	E4_Aa	NovelBoundary	0	0.00	2.87	20.89	3.37	0.00	4.79
49	ER4a	ExonRegion	0	48.40	35.47	242.03	58.00	127.78	80.85
50	E4_Da	NovelBoundary	0	0.00	0.00	15.48	11.47	0.00	0.00
51	E4a_E5a	KnownJunction	0	54.29	55.63	231.35	70.63	233.81	169.17
52	I4	Intron	0	2.10	4.82	14.88	3.09	0.40	0.00
53	I4_SR1	SilentIntronRegion	0	2.11	4.85	14.99	3.12	0.40	0.00
54	E5_Aa	NovelBoundary	0	0.00	0.00	11.67	0.00	0.00	0.00
55	ER5a	ExonRegion	0	55.49	37.49	122.64	33.36	138.36	114.02
56	E5a_E6a	KnownJunction	0	87.67	58.78	108.39	34.96	305.22	193.77
57	ER6a	ExonRegion	0	83.38	41.76	124.46	43.08	118.62	88.21
58	E6a_E7a	KnownJunction	0	66.82	50.17	131.16	32.35	207.76	138.61
59	ER6b	ExonRegion	0	60.96	37.66	121.03	47.03	104.11	84.08
60	ER7a	ExonRegion	0	64.11	57.52	119.86	44.10	139.25	78.25
61	E7_Da	NovelBoundary	0	6.15	0.00	29.09	12.34	0.00	0.00
62	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	4.41	0.00
63	E7a_E9b	KnownJunction	0	87.43	56.64	120.40	30.23	179.87	92.77
64	E7a_E13a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	8.56
65	I7	Intron	0	4.08	2.71	33.24	17.78	1.83	0.63
66	I7_AR1	ActiveIntronRegion	0	0.67	2.30	42.70	19.86	1.94	0.00
67	I7_SR1	SilentIntronRegion	0	0.00	2.19	48.02	21.15	1.81	0.00
68	I7_AR2	ActiveIntronRegion	0	4.82	2.80	31.12	17.32	1.81	0.76
69	E8_Aa	NovelBoundary	0	0.00	0.00	35.35	14.57	0.00	0.00
70	ER8a	ExonRegion	0	0.31	0.00	0.00	0.00	3.58	0.00
71	E8_Da	NovelBoundary	0	0.00	0.00	22.83	5.11	0.00	0.00
72	E8a_E9b	KnownJunction	0	0.00	0.00	0.00	0.00	10.24	0.00
73	I8	Intron	0	0.92	1.13	27.64	14.52	0.98	0.00
74	I8_AR1	ActiveIntronRegion	0	0.92	1.13	27.72	14.56	0.99	0.00
75	E9_Aa	NovelBoundary	0	0.00	0.00	22.14	3.10	0.00	0.00
76	ER9a	ExonRegion	0	12.53	6.72	25.73	9.77	6.82	3.84
77	E9_Ab	KnownBoundary	1	15.79	14.12	47.13	3.15	66.34	73.88
78	E9_Da	NovelBoundary	0	3.49	0.00	27.67	9.68	4.66	0.00
79	E9a_E13a	KnownJunction	1	43.02	52.65	6.60	35.18	121.27	128.96
80	ER9b	ExonRegion	0	94.12	60.85	127.97	40.72	132.92	91.84
81	I9	Intron	0	5.37	2.71	25.83	10.66	10.69	5.09
82	I9_AR1	ActiveIntronRegion	0	5.38	2.72	25.87	10.68	10.71	5.10
83	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.80	0.00
84	E11a_E12a	KnownJunction	1	64.90	0.00	84.88	3.26	114.86	20.15
85	E11a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	3.83	0.00
86	ER11a	ExonRegion	1	65.70	6.73	121.49	6.12	61.98	10.89
87	E12_Aa	NovelBoundary	0	14.64	3.37	22.60	6.74	32.55	10.41
88	ER12a	ExonRegion	1	70.25	8.81	104.68	9.73	98.84	16.60
89	E12_Da	NovelBoundary	1	7.47	8.21	42.86	0.00	36.04	14.27
90	E12a_E13a	KnownJunction	1	72.79	14.46	104.86	12.40	216.41	30.06
91	E13_Aa	NovelBoundary	0	25.97	25.03	28.01	11.42	89.48	98.06
92	ER13a	ExonRegion	0	79.76	38.15	173.92	70.43	107.71	82.31
93	E13_Da	KnownBoundary	0	35.67	10.91	64.38	27.46	69.00	81.94
94	E13_Db	KnownBoundary	0	18.14	2.36	78.50	27.68	8.57	7.81
95	ER13b	ExonRegion	1	58.06	8.31	269.39	116.33	57.86	65.72
96	ER13c	ExonRegion	0	3.48	1.36	11.70	4.32	17.26	5.51
97	E13_Dc	KnownBoundary	1	6.51	3.04	10.19	0.00	238.55	49.70
98	E13_Dd	KnownBoundary	1	42.96	0.00	9.79	0.00	497.00	97.47
99	ER13d	ExonRegion	1	50.67	4.16	41.28	6.46	538.78	127.73
100	ER13e	ExonRegion	0	26.66	13.04	14.20	2.80	431.74	191.36
101	IG33	Intergenic	0	1.34	0.66	9.46	3.38	3.65	3.39
102	IG33_SR2	SilentIntergenicRegion	0	1.26	0.63	10.35	3.06	0.43	2.44
103	IG33_AR2	ActiveIntergenicRegion	0	0.09	0.00	12.61	2.45	6.08	1.93