Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	VGLL4	Gene	0	21.68	11.53	9.91	6.43	12.24	11.27
2	273038	Transcript	0	11.15	4.18	6.55	4.12	7.96	3.95
3	404339	Transcript	0	0	0	0	0	0	0
4	445411	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
5	426568	Transcript	0	0	0	0	0	0	0
6	463387	Transcript	0	1.71	1.64	0.00	1.72	0.00	0.00
7	417206	Transcript	0	0.00	0.20	0.00	0.00	0.00	0.00
8	417466	Transcript	0	0.01	0.88	0.92	0.46	0.03	0.00
9	418000	Transcript	0	0	0	0	0	0	0
10	419541	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
11	430365	Transcript	0	23.99	12.23	9.86	7.47	5.24	9.71
12	480288	Transcript	0	2.89	2.57	1.64	1.77	3.22	4.94
13	458499	Transcript	0	0.70	0.00	0.53	0.52	0.66	0.22
14	424709	Transcript	0	0.00	0.00	1.04	0.00	0.00	0.00
15	437722	Transcript	0	0.00	0.00	0.66	0.33	0.55	1.13
16	413604	Transcript	0	0.31	0.00	1.60	0.63	0.00	0.00
17	451674	Transcript	0	0.71	0.00	0.00	0.00	0.00	0.00
18	424529	Transcript	0	5.60	0.86	0.00	0.00	1.20	0.00
19	477880	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
20	ER1a	ExonRegion	0	0.00	0.00	0.14	0.00	0.00	0.00
21	ER1b	ExonRegion	0	0.00	0.00	2.17	0.00	0.00	0.00
22	ER1c	ExonRegion	0	0.00	0.00	2.17	0.00	0.00	0.00
23	ER1d	ExonRegion	0	0.00	0.00	4.22	0.00	0.00	0.00
24	E1_Da	KnownBoundary	0	0.00	2.64	7.06	0.00	0.00	0.00
25	E1a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
26	ER1e	ExonRegion	0	2.44	0.51	1.43	0.00	0.60	0.00
27	E1_Ae	KnownBoundary	0	3.25	2.92	0.00	0.00	0.00	0.00
28	ER1f	ExonRegion	0	1.28	1.73	1.51	1.18	0.85	0.00
29	E1b_E4a	KnownJunction	0	0.00	4.95	3.53	6.47	4.33	0.00
30	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
31	ER2b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
32	E2_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
33	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
34	ER2c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
35	ER2d	ExonRegion	0	1.58	1.44	0.90	1.50	0.00	0.00
36	E2b_E4a	KnownJunction	0	26.81	13.16	5.64	3.37	0.00	0.00
37	E3_Aa	NovelBoundary	0	9.76	0.00	3.36	0.00	0.00	0.00
38	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
39	E3_Da	NovelBoundary	0	12.11	0.00	2.79	2.94	0.00	0.00
40	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
41	ER4a	ExonRegion	0	20.02	13.79	15.57	8.98	4.51	0.00
42	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
43	E4a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
44	E4a_E7a	KnownJunction	0	0.00	2.81	0.00	0.00	0.00	0.00
45	E4a_E15a	KnownJunction	0	24.16	3.26	24.71	17.18	0.00	0.00
46	E4b_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
47	ER4b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
48	E5_Aa	NovelBoundary	0	16.81	20.92	6.55	6.47	3.50	32.07
49	ER5a	ExonRegion	0	3.41	3.27	0.00	3.44	0.00	0.00
50	E5_Da	NovelBoundary	0	9.46	0.00	13.32	5.60	28.30	12.09
51	I5_SR1	SilentIntronRegion	0	3.52	0.59	9.77	4.28	0.73	0.00
52	I5_AR3	ActiveIntronRegion	0	2.91	1.23	2.98	0.03	11.39	1.03
53	E6_Aa	NovelBoundary	0	69.96	32.40	37.40	20.23	65.59	26.95
54	ER6a	ExonRegion	0	0.04	2.65	2.77	1.38	0.08	0.00
55	E6_Da	NovelBoundary	0	260.91	316.04	72.52	66.66	343.76	471.67
56	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
57	E7_Aa	NovelBoundary	0	14.16	3.43	0.00	5.65	16.65	0.00
58	ER7a	ExonRegion	0	8.10	2.66	5.72	1.23	5.10	0.00
59	E7_Da	NovelBoundary	0	3.19	0.00	2.50	3.26	16.73	0.00
60	E7a_E15a	KnownJunction	0	3.07	10.46	3.24	0.00	0.00	0.00
61	I7_SR2	SilentIntronRegion	0	11.73	1.79	6.90	1.86	1.37	0.64
62	ER8a	ExonRegion	0	18.39	17.20	10.50	9.19	6.32	3.46
63	E8_Da	NovelBoundary	0	3.74	0.00	10.47	0.00	0.00	8.31
64	E8a_E15a	KnownJunction	0	29.59	7.26	9.22	5.76	4.16	15.95
65	I8_SR1	SilentIntronRegion	0	1.86	0.00	9.81	1.84	0.00	0.00
66	I8_AR2	ActiveIntronRegion	0	4.97	2.31	12.17	5.99	0.00	0.15
67	I8_AR3	ActiveIntronRegion	0	6.64	1.27	16.22	5.18	0.00	0.00
68	I8_AR4	ActiveIntronRegion	0	1.49	0.85	10.61	10.10	0.00	0.00
69	ER9a	ExonRegion	0	5.78	5.14	3.27	3.54	6.43	9.89
70	E9_Da	NovelBoundary	0	0.00	0.00	15.60	2.88	0.00	0.00
71	E9a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
72	E10_Aa	NovelBoundary	0	501.27	359.91	140.38	115.43	1343.50	1672.16
73	ER10a	ExonRegion	0	1.76	0.00	0.00	0.00	0.04	0.00
74	E10_Da	NovelBoundary	0	134.73	93.54	84.88	39.80	360.99	187.56
75	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
76	E11_Aa	NovelBoundary	0	2.77	0.00	6.77	0.00	0.00	14.10
77	ER11a	ExonRegion	0	1.02	0.00	2.10	2.09	2.60	0.90
78	E11_Da	NovelBoundary	0	3.13	0.00	6.49	5.93	4.83	13.68
79	E11a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
80	ER12a	ExonRegion	0	0.00	0.00	2.09	0.00	0.00	0.00
81	E12a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
82	ER13a	ExonRegion	0	0.00	0.00	1.33	0.66	1.10	2.26
83	E13a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
84	E14_Aa	NovelBoundary	0	2.71	0.00	10.76	7.29	0.00	0.00
85	ER14a	ExonRegion	0	0.62	0.00	3.20	1.27	0.00	0.00
86	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
87	E15_Da	NovelBoundary	1	55.56	10.57	2.96	17.45	9.66	9.65
88	ER15a	ExonRegion	0	51.69	16.29	19.69	17.86	5.60	5.85
89	ER15b	ExonRegion	0	85.93	43.97	32.90	28.70	8.07	10.11
90	E15b_E18a	KnownJunction	0	39.17	41.57	19.64	28.17	19.06	36.19
91	I15_AR4	ActiveIntronRegion	0	0.62	0.41	1.89	5.34	0.00	0.00
92	I15_AR5	ActiveIntronRegion	0	2.11	0.00	7.85	8.62	0.00	0.00
93	I15_AR6	ActiveIntronRegion	0	1.95	0.00	16.71	7.13	0.00	0.00
94	I15_SR5	SilentIntronRegion	0	2.11	0.00	23.90	8.62	0.00	0.00
95	I15_AR7	ActiveIntronRegion	0	2.57	0.00	19.39	9.01	0.00	0.00
96	I15_AR8	ActiveIntronRegion	0	1.58	0.00	10.75	5.17	0.00	0.00
97	I15_AR9	ActiveIntronRegion	0	1.24	0.22	9.62	4.77	0.19	0.78
98	E16_Aa	NovelBoundary	0	0.00	8.44	0.00	0.00	0.00	0.00
99	ER16a	ExonRegion	0	1.41	0.00	0.00	0.00	0.00	0.00
100	E16_Da	NovelBoundary	0	9.34	9.11	11.84	5.44	5.16	0.00
101	E16a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
102	I16_AR5	ActiveIntronRegion	0	0.66	1.42	0.00	1.50	8.06	10.02
103	I16_AR6	ActiveIntronRegion	0	7.45	4.92	9.90	4.00	0.75	0.38
104	E17_Aa	NovelBoundary	0	3.74	6.30	0.00	0.00	0.00	0.00
105	ER17a	ExonRegion	0	5.60	0.86	0.00	0.00	1.20	0.00
106	E17_Ab	KnownBoundary	0	7.35	6.07	0.00	0.00	7.49	0.00
107	ER17b	ExonRegion	0	18.26	9.95	3.59	2.75	3.93	2.64
108	E17_Da	NovelBoundary	0	0.00	6.97	0.00	4.89	0.00	0.00
109	E17a_E18a	KnownJunction	0	26.33	3.21	0.00	2.39	5.16	5.04
110	I17_SR3	SilentIntronRegion	0	3.89	6.07	4.11	0.90	0.63	0.00
111	I17_AR4	ActiveIntronRegion	0	9.29	0.00	2.17	1.29	0.00	0.00
112	I17_AR5	ActiveIntronRegion	0	11.89	1.53	2.17	0.00	0.00	0.00
113	I17_AR6	ActiveIntronRegion	0	10.56	6.23	2.17	0.00	0.00	0.00
114	I17_AR8	ActiveIntronRegion	0	17.06	6.93	4.01	5.25	2.22	0.37
115	I17_AR9	ActiveIntronRegion	0	10.93	2.90	3.58	1.57	0.00	1.45
116	I17_SR6	SilentIntronRegion	0	5.26	5.42	4.23	3.55	0.00	0.00
117	ER18a	ExonRegion	0	65.65	53.90	19.04	15.28	14.95	14.09
118	E18_Da	KnownBoundary	0	94.72	68.90	21.23	10.77	20.64	10.07
119	E18_Db	KnownBoundary	0	11.21	27.79	3.07	6.20	8.66	10.24
120	ER18b	ExonRegion	0	78.39	57.90	16.06	10.58	17.69	9.58
121	E18_Dc	KnownBoundary	0	24.89	3.26	2.96	0.00	24.80	0.00
122	E18c_E20b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
123	ER18c	ExonRegion	0	77.06	47.37	11.30	9.91	10.85	12.77
124	E18_Dd	KnownBoundary	0	32.30	12.60	3.36	3.21	4.99	15.11
125	ER18d	ExonRegion	0	60.17	27.63	11.22	6.75	21.64	27.21
126	E18_De	KnownBoundary	0	18.98	3.09	9.28	6.42	29.96	52.56
127	ER18e	ExonRegion	0	49.62	15.06	15.21	4.31	21.70	29.62
128	ER18f	ExonRegion	0	38.71	21.43	11.97	5.41	20.56	24.39
129	E18f_E19a	KnownJunction	0	32.72	37.40	5.46	7.83	27.97	4.11
130	E18_Dg	NovelBoundary	0	13.68	0.00	0.00	2.94	0.00	0.00
131	ER18g	ExonRegion	0	0.00	1.01	0.00	0.00	0.00	0.00
132	I18	Intron	0	12.98	1.02	1.07	0.53	0.44	0.00
133	I18_AR1	ActiveIntronRegion	0	16.89	0.00	0.00	2.15	0.00	0.00
134	I18_SR2	SilentIntronRegion	0	16.85	1.14	2.38	0.87	0.99	0.00
135	I18	Intron	0	18.01	7.22	4.63	3.32	1.86	0.73
136	I18_SR1	SilentIntronRegion	0	11.08	3.97	2.90	0.00	0.00	0.00
137	I18_AR2	ActiveIntronRegion	0	21.91	10.51	5.17	4.46	0.63	0.00
138	I18_SR2	SilentIntronRegion	0	12.24	5.60	1.96	1.02	0.00	0.00
139	I18_AR3	ActiveIntronRegion	0	18.39	6.67	5.09	3.63	2.81	1.20
140	E19_Aa	NovelBoundary	0	5.78	10.63	3.47	0.00	3.66	8.31
141	ER19a	ExonRegion	0	34.53	28.87	7.66	7.71	25.21	18.14
142	E19_Da	NovelBoundary	0	35.25	13.78	8.54	2.72	28.47	31.82
143	E19b_E20a	KnownJunction	0	59.05	33.52	9.22	0.00	52.27	61.12
144	ER19b	ExonRegion	0	41.78	25.26	8.69	2.15	28.74	33.61
145	I19_AR2	ActiveIntronRegion	0	8.25	1.42	2.58	1.53	2.58	1.76
146	E20_Aa	NovelBoundary	0	0.00	2.36	9.62	0.00	9.57	26.95
147	ER20a	ExonRegion	0	54.74	31.79	7.45	3.66	56.82	42.60
148	E20_Da	KnownBoundary	0	54.23	32.34	17.65	5.22	174.21	86.22
149	ER20b	ExonRegion	0	42.75	27.39	22.28	5.87	67.50	137.01
150	E20_Db	KnownBoundary	0	15.31	6.36	6.15	6.04	14.65	11.08
151	E20_Dc	KnownBoundary	0	7.47	3.49	0.00	0.00	0.00	0.00
152	E20_Dd	KnownBoundary	0	12.47	8.27	3.53	0.00	0.00	0.00
153	ER20c	ExonRegion	0	17.70	10.71	9.36	5.63	0.00	1.28
154	ER20d	ExonRegion	0	23.22	12.47	5.07	6.10	2.71	0.31
155	ER20e	ExonRegion	0	68.31	44.14	25.80	13.89	17.77	5.60
156	E20_De	KnownBoundary	1	67.79	46.01	15.94	18.32	76.41	14.36
157	ER20f	ExonRegion	0	58.38	27.44	17.83	14.66	17.07	8.20
158	E20_Ab	KnownBoundary	1	115.33	22.05	36.26	9.46	13.57	8.65
159	ER20g	ExonRegion	1	76.47	29.53	22.70	15.43	31.37	8.06
160	E20_Df	KnownBoundary	1	77.85	28.97	26.30	21.80	78.82	19.65
161	ER20h	ExonRegion	0	105.82	38.25	75.72	34.91	24.46	15.19
162	E20_Dg	KnownBoundary	0	113.10	40.27	109.81	39.58	9.24	24.85
163	ER20i	ExonRegion	0	22.30	8.37	12.96	8.24	15.91	7.89