Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	C3orf31	Gene	0	8.31	4.58	9.42	7.02	12.96	9.43
2	273037	Transcript	0	0.00	0.00	0.00	0.00	2.54	6.38
3	411947	Transcript	0	0.35	0.00	0.00	0.04	0.00	0.00
4	417723	Transcript	0	2.43	2.30	2.36	0.26	0.00	0.00
5	457498	Transcript	0	3.51	3.92	5.64	4.89	6.21	1.29
6	494388	Transcript	0	1.97	0.64	1.01	1.67	1.40	4.59
7	444133	Transcript	0	5.25	1.70	8.79	8.59	0.25	0.00
8	455809	Transcript	0	0	0	0	0	0	0
9	460246	Transcript	0	1.31	2.58	2.37	4.60	0.04	0.03
10	414736	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
11	486090	Transcript	0	4.46	1.81	8.11	3.36	4.56	3.59
12	498127	Transcript	0	3.16	3.07	3.55	1.38	4.23	0.97
13	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
14	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
15	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
16	E1_Ae	KnownBoundary	0	0.00	0.00	0.00	5.82	0.00	0.00
17	ER1b	ExonRegion	0	0.00	0.00	0.00	1.23	0.00	0.00
18	ER1c	ExonRegion	0	0.00	0.00	0.00	2.15	0.00	0.00
19	ER1d	ExonRegion	0	0.00	0.98	0.00	2.15	0.00	0.00
20	ER1e	ExonRegion	0	2.24	4.94	4.01	1.29	0.00	0.00
21	E1_Af	KnownBoundary	0	0.00	2.76	0.00	0.00	0.00	4.95
22	E1_Ag	KnownBoundary	0	3.19	0.00	6.55	0.00	0.00	0.00
23	ER1f	ExonRegion	0	2.71	2.08	6.52	0.00	1.03	0.00
24	ER1g	ExonRegion	0	3.87	3.59	9.10	1.21	3.64	1.30
25	E1a_E2a	KnownJunction	0	0.00	0.00	3.36	0.00	0.00	0.00
26	E1a_E3a	KnownJunction	0	5.84	0.00	0.00	0.00	14.32	5.21
27	I1_SR2	SilentIntronRegion	0	2.49	1.84	3.72	8.87	0.00	0.00
28	ER2a	ExonRegion	0	3.57	6.90	3.71	0.79	0.00	0.00
29	E2a_E3a	KnownJunction	0	3.74	0.00	0.00	0.00	0.00	0.00
30	ER3a	ExonRegion	0	17.77	11.65	18.00	8.75	7.14	2.19
31	E3_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
32	E3a_E4a	KnownJunction	0	22.84	20.92	2.68	5.76	18.23	15.20
33	ER3b	ExonRegion	0	1.97	0.64	1.01	1.67	1.40	4.59
34	E3_Db	NovelBoundary	0	5824.78	3073.64	1167.60	978.06	21629.81	27687.92
35	ER4a	ExonRegion	0	23.25	14.01	30.42	19.78	11.18	4.54
36	E4a_E5a	KnownJunction	0	2.77	19.07	11.50	5.98	5.16	0.00
37	E4a_E7b	KnownJunction	0	27.96	7.76	33.07	22.56	10.32	8.65
38	ER5a	ExonRegion	0	7.02	4.04	14.16	8.36	3.85	3.03
39	E5_Da	NovelBoundary	0	2.89	0.00	20.32	11.09	0.00	4.45
40	E5_Db	NovelBoundary	0	0.00	0.00	6.09	6.74	0.00	0.00
41	E5b_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
42	E5b_E7b	KnownJunction	0	3.25	11.76	10.19	11.42	4.83	0.00
43	ER5b	ExonRegion	0	3.86	6.96	18.42	9.93	2.36	1.77
44	ER6a	ExonRegion	0	1.05	0.00	0.00	0.11	0.01	0.00
45	E6a_E7b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
46	ER7a	ExonRegion	0	0.58	0.44	0.92	4.77	0.15	0.12
47	E7_Ab	KnownBoundary	0	0.00	0.00	7.06	13.48	0.00	0.00
48	ER7b	ExonRegion	0	27.00	18.79	21.81	24.45	20.56	7.22
49	E7_Da	KnownBoundary	0	36.15	0.00	27.67	33.06	66.59	8.56
50	ER7c	ExonRegion	0	28.00	6.68	35.33	30.62	29.66	6.35
51	E7b_E8a	KnownJunction	0	0.00	0.00	5.58	3.10	0.00	0.00
52	E7b_E9a	KnownJunction	0	31.15	17.77	58.69	28.38	38.29	18.47
53	E7b_E11b	NovelJunction	0	0.00	8.44	4.90	0.00	0.00	0.00
54	ER8a	ExonRegion	0	0.94	3.71	2.99	5.36	0.00	0.00
55	E8a_E9a	KnownJunction	0	3.74	6.19	0.00	5.17	0.00	0.00
56	ER9a	ExonRegion	0	38.74	14.37	26.52	36.08	38.55	12.97
57	E9_Da	KnownBoundary	0	0.00	3.49	3.36	2.34	0.00	0.00
58	E9a_E11b	KnownJunction	0	30.01	28.46	33.24	38.22	47.94	4.03
59	ER9b	ExonRegion	0	6.07	0.64	3.76	3.36	0.24	0.00
60	E9c_E10b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
61	ER9c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
62	ER10a	ExonRegion	0	2.64	1.40	2.94	1.39	0.41	0.00
63	E10_Ab	KnownBoundary	0	0.00	10.29	5.92	3.37	4.74	0.00
64	ER10b	ExonRegion	0	1.95	1.49	6.28	2.33	2.32	0.43
65	E10_Da	NovelBoundary	0	7.23	0.00	3.07	6.52	0.00	0.00
66	E10a_E11b	KnownJunction	0	6.51	0.00	3.53	4.78	0.00	4.95
67	I10	Intron	0	1.50	0.00	6.71	6.14	1.07	0.44
68	I10_AR1	ActiveIntronRegion	0	1.79	0.00	7.70	6.94	1.27	0.52
69	E11_Aa	NovelBoundary	0	0.00	0.00	9.91	3.37	4.66	0.00
70	ER11a	ExonRegion	0	3.16	3.07	3.55	1.38	4.23	0.97
71	E11_Ab	KnownBoundary	0	2.53	8.66	12.58	0.00	9.24	5.21
72	ER11b	ExonRegion	0	44.75	18.91	31.84	31.78	90.73	34.98
73	E11_Da	KnownBoundary	0	3.74	10.01	13.49	16.75	7.32	18.22
74	E11a_E11c	NovelJunction	0	0.00	3.49	0.00	5.22	3.83	0.00
75	E11a_E11d	KnownJunction	0	39.89	19.46	12.58	14.63	266.60	140.29
76	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	5.08	12.76
77	ER11c	ExonRegion	0	6.15	3.87	14.67	10.99	3.44	15.60
78	E11_Db	KnownBoundary	0	3.74	0.00	3.53	3.10	0.00	4.11
79	E11b_E11c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
80	ER11d	ExonRegion	0	4.98	1.13	13.25	6.32	0.57	1.65
81	E11_Ac	KnownBoundary	0	6.69	7.87	12.92	9.41	4.91	10.16
82	ER11e	ExonRegion	0	8.20	2.76	7.67	6.64	1.52	0.84
83	E11_Dc	KnownBoundary	0	0.00	0.00	3.19	0.00	3.91	0.00
84	E11c_E11d	KnownJunction	0	7.29	0.00	6.72	3.26	13.82	3.86
85	ER11f	ExonRegion	0	5.76	2.90	8.14	2.37	12.70	9.12
86	E11_Ad	KnownBoundary	0	3.74	0.00	0.00	6.52	72.83	57.26
87	ER11g	ExonRegion	0	32.42	14.14	13.21	11.26	225.15	144.66
88	E11_Dd	KnownBoundary	0	3.56	2.64	9.56	2.88	0.00	0.00
89	E11d_E12a	KnownJunction	0	26.75	27.11	6.60	0.00	236.47	169.59
90	ER11h	ExonRegion	0	5.25	1.70	8.79	8.59	0.25	0.00
91	I11	Intron	0	9.37	4.38	9.41	3.96	14.01	7.01
92	I11_AR1	ActiveIntronRegion	0	7.81	0.75	9.80	4.08	52.22	23.56
93	I11_AR2	ActiveIntronRegion	0	14.60	7.57	11.62	4.77	10.00	7.34
94	E12_Aa	NovelBoundary	0	33.38	13.33	12.01	0.00	71.75	73.63
95	ER12a	ExonRegion	0	33.46	19.98	5.29	3.87	97.21	69.82
96	E12_Da	KnownBoundary	0	54.35	30.82	8.42	6.74	88.15	68.00
97	ER12b	ExonRegion	0	24.78	18.85	8.80	1.86	201.96	143.85
98	ER12c	ExonRegion	0	2.11	0.00	0.00	0.00	5.42	1.85
99	ER12d	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
100	IG16_AR5	ActiveIntergenicRegion	0	10.79	2.33	6.14	3.61	0.31	0.13
101	IG16_AR4	ActiveIntergenicRegion	0	6.10	0.91	1.69	0.47	49.13	26.31