Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	MLH1	Gene	0	37.72	24.75	20.66	12.59	42.56	28.91
2	231790	Transcript	0	0.65	0.00	3.09	0.55	1.69	0.28
3	457004	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
4	436867	Transcript	0	0	0	0	0	0	0
5	432299	Transcript	0	0	0	0	0	0	0
6	442249	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
7	454028	Transcript	0	0	0	0	0	0	0
8	396447	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
9	396438	Transcript	0	0	0	0	0	0	0
10	456676	Transcript	0	0	0	0	0	0	0
11	458205	Transcript	0	0.36	0.00	0.38	0.07	1.57	0.00
12	476172	Transcript	0	1.28	0.35	1.39	0.72	0.00	0.00
13	455445	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
14	441265	Transcript	0	0	0	0	0	0	0
15	435176	Transcript	0	0	0	0	0	0	0
16	429117	Transcript	0	0	0	0	0	0	0
17	492474	Transcript	0	0	0	0	0	0	0
18	433611	Transcript	0	0	0	0	0	0	0
19	466900	Transcript	0	0.00	0.46	0.00	0.00	0.00	0.00
20	485889	Transcript	0	0.67	1.97	0.69	0.00	0.00	0.00
21	383761	Transcript	0	3.74	9.96	6.03	5.49	0.00	5.21
22	421440	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
23	447829	Transcript	0	3.01	0.00	3.53	0.00	9.07	0.00
24	458009	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
25	413212	Transcript	0	6.87	6.52	0.00	0.00	0.00	5.21
26	413740	Transcript	0	0	0	0	0	0	0
27	450420	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
28	450496	Transcript	0	11.03	12.92	10.81	7.20	5.60	4.88
29	ER1a	ExonRegion	0	0.00	0.00	4.00	1.09	0.00	0.00
30	E1_Ab	KnownBoundary	0	0.00	0.00	2.96	0.00	0.00	0.00
31	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
32	E1_Ad	KnownBoundary	0	0.00	0.00	3.42	0.00	0.00	0.00
33	E1_Ae	KnownBoundary	0	0.00	0.00	3.36	0.00	0.00	0.00
34	E1_Af	KnownBoundary	0	0.00	0.00	3.07	8.81	0.00	0.00
35	ER1b	ExonRegion	1	0.00	0.00	19.28	2.15	0.00	0.00
36	ER1c	ExonRegion	1	1.17	0.92	20.52	2.63	0.00	0.00
37	ER1d	ExonRegion	1	2.11	6.23	23.90	4.31	0.00	0.00
38	ER1e	ExonRegion	1	2.11	7.55	22.12	4.31	0.00	0.00
39	E1_Ag	KnownBoundary	0	6.69	16.87	24.82	15.99	7.32	3.78
40	ER1f	ExonRegion	1	2.11	10.39	28.01	5.00	1.81	0.99
41	ER1g	ExonRegion	0	3.31	10.80	10.28	6.08	2.49	1.25
42	E1_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
43	E1a_E4b	KnownJunction	0	0.00	6.97	5.75	0.00	0.00	0.00
44	E1a_E4c	KnownJunction	0	3.62	13.11	0.00	0.00	0.00	0.00
45	E1a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
46	ER1h	ExonRegion	0	0.00	0.00	0.00	1.62	0.08	0.00
47	E1_Ah	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
48	E1_Ai	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
49	E1_Aj	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
50	E1_Ak	KnownBoundary	0	0.00	0.00	3.53	3.37	5.16	0.00
51	ER1i	ExonRegion	0	0.00	0.00	0.00	2.15	1.81	0.00
52	ER1j	ExonRegion	0	0.00	0.59	1.14	2.15	1.81	0.00
53	E1_Al	KnownBoundary	0	0.00	3.49	3.53	0.00	0.00	0.00
54	ER1k	ExonRegion	0	0.00	3.81	2.17	2.15	1.81	0.00
55	ER1l	ExonRegion	0	0.00	4.16	2.17	2.15	1.81	0.00
56	E1_Am	KnownBoundary	0	0.00	3.32	3.30	0.00	0.00	0.00
57	ER1m	ExonRegion	0	0.00	4.16	2.17	3.72	1.73	0.00
58	ER1n	ExonRegion	0	0.80	2.32	1.86	6.46	0.00	0.00
59	E1b_E3a	KnownJunction	0	0.00	0.00	2.96	0.00	0.00	0.00
60	E1b_E4b	KnownJunction	0	2.83	0.00	0.00	9.46	0.00	0.00
61	E1b_E4c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
62	ER2a	ExonRegion	0	1.34	3.95	1.38	0.00	0.00	0.00
63	E2a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
64	ER3a	ExonRegion	0	1.94	0.00	2.82	0.06	0.00	0.00
65	E3_Da	KnownBoundary	0	7.35	0.00	3.53	0.00	0.00	0.00
66	E3a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
67	ER3b	ExonRegion	0	3.69	0.00	1.95	0.00	0.00	0.00
68	E3_Db	NovelBoundary	0	435.29	291.13	104.69	81.83	427.83	517.76
69	E3b_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
70	ER4a	ExonRegion	0	1.41	1.39	3.62	2.87	0.00	0.00
71	ER4b	ExonRegion	0	4.64	7.48	9.99	10.77	0.00	0.00
72	ER4c	ExonRegion	0	10.33	13.83	43.02	32.36	3.64	0.48
73	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
74	E4a_E6a	KnownJunction	0	15.31	15.19	29.37	27.89	9.57	4.45
75	E4a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
76	ER5a	ExonRegion	0	1.09	0.00	1.14	0.21	4.71	0.00
77	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
78	ER6a	ExonRegion	0	29.05	12.43	20.57	21.92	3.30	1.61
79	E6_Da	KnownBoundary	0	33.92	17.21	13.15	15.33	4.41	0.00
80	ER6b	ExonRegion	0	26.19	11.17	21.59	10.23	2.15	0.00
81	E6b_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
82	E6c_E7a	KnownJunction	0	25.67	8.27	25.73	2.72	4.33	0.00
83	ER6c	ExonRegion	0	21.11	19.53	29.98	10.34	1.81	0.00
84	ER6d	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
85	ER7a	ExonRegion	0	15.26	17.80	45.04	18.84	5.74	0.00
86	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
87	E7a_E9a	KnownJunction	0	19.64	10.69	37.97	14.30	8.74	0.00
88	ER8a	ExonRegion	0	0.00	1.37	0.00	0.00	0.00	0.00
89	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
90	E9_Aa	NovelBoundary	0	0.00	3.49	10.59	0.00	0.00	0.00
91	E9_Ab	NovelBoundary	0	16.45	9.79	24.88	11.91	9.41	0.00
92	ER9a	ExonRegion	0	15.72	7.93	31.22	10.29	4.62	0.00
93	ER9b	ExonRegion	1	14.18	8.72	32.73	8.20	3.42	2.13
94	E9a_E10a	KnownJunction	0	13.98	3.21	35.41	8.92	5.16	5.21
95	E9a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
96	E10a_E10b	KnownJunction	0	3.74	9.96	6.03	5.49	0.00	5.21
97	E10_Ab	NovelBoundary	0	11.33	7.93	8.03	7.67	3.75	7.72
98	ER10a	ExonRegion	0	14.78	8.31	28.74	12.10	1.81	3.70
99	ER10b	ExonRegion	0	14.78	8.31	35.48	12.93	1.81	3.70
100	ER10c	ExonRegion	0	14.10	12.74	47.30	19.47	0.96	2.34
101	E10_Db	NovelBoundary	0	14.04	18.67	66.66	23.33	0.00	0.00
102	E10d_E11a	KnownJunction	0	14.88	18.17	32.28	17.07	0.00	0.00
103	ER10d	ExonRegion	0	11.42	13.22	46.12	16.84	2.30	0.00
104	ER10e	ExonRegion	0	12.67	16.62	39.11	15.08	9.04	0.00
105	ER11a	ExonRegion	0	13.41	16.62	28.75	14.83	10.53	1.20
106	E11c_E12a	KnownJunction	0	13.98	12.26	33.87	11.85	32.55	13.35
107	ER11b	ExonRegion	0	12.67	15.58	28.24	14.00	10.85	1.85
108	ER11c	ExonRegion	0	13.53	9.25	25.38	8.42	12.00	6.06
109	E12_Ac	NovelBoundary	0	11.21	3.49	10.59	3.37	10.32	0.00
110	ER12a	ExonRegion	0	28.67	11.53	40.58	14.52	17.26	7.40
111	E12_Da	KnownBoundary	0	32.54	16.37	47.93	21.26	15.48	0.00
112	ER12b	ExonRegion	1	31.67	8.31	49.97	23.70	10.85	7.40
113	ER12c	ExonRegion	0	31.22	13.65	51.36	26.16	9.56	6.48
114	ER12d	ExonRegion	0	35.73	18.86	58.49	34.22	8.55	3.20
115	E12b_E13a	KnownJunction	0	33.20	22.72	75.48	44.97	0.00	4.53
116	E12b_E15b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
117	E12b_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
118	ER12e	ExonRegion	0	30.30	16.25	69.26	42.96	3.62	2.29
119	E13_Aa	NovelBoundary	0	0.00	0.00	10.30	12.56	0.00	0.00
120	ER13a	ExonRegion	0	24.53	14.64	54.45	36.01	5.71	5.08
121	E13_Da	KnownBoundary	0	24.83	23.29	28.41	23.98	28.47	8.98
122	ER13b	ExonRegion	0	32.60	21.11	30.07	29.13	14.93	6.52
123	E13_Db	NovelBoundary	0	0.00	0.00	8.20	5.82	0.00	0.00
124	E13b_E14a	KnownJunction	0	31.63	15.41	20.55	31.65	18.89	13.10
125	E13b_E15b	KnownJunction	0	3.01	0.00	3.53	0.00	9.07	0.00
126	E13b_E16a	KnownJunction	0	6.87	6.52	0.00	0.00	0.00	5.21
127	E14_Aa	NovelBoundary	0	3.37	7.09	9.45	12.51	4.74	0.00
128	ER14a	ExonRegion	0	42.29	25.09	72.29	45.51	12.87	7.23
129	E14_Da	NovelBoundary	0	0.00	2.92	11.61	5.98	0.00	4.70
130	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
131	E14a_E15b	KnownJunction	0	33.86	32.34	73.83	33.11	18.81	18.13
132	E14a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
133	E15_Aa	NovelBoundary	0	0.00	3.49	3.02	17.29	0.00	0.00
134	ER15a	ExonRegion	0	7.92	7.27	17.38	7.00	3.62	1.85
135	ER15b	ExonRegion	0	39.58	22.36	50.00	26.38	13.55	6.67
136	E15_Da	KnownBoundary	0	37.66	28.07	22.26	17.24	14.48	14.36
137	ER15c	ExonRegion	0	33.60	30.19	19.17	9.57	11.70	6.81
138	E15b_E16a	KnownJunction	0	34.04	39.48	9.96	3.15	25.64	16.04
139	ER16a	ExonRegion	0	34.27	22.05	33.48	22.11	16.08	9.02
140	E16_Da	KnownBoundary	0	29.34	41.51	35.18	6.74	7.66	27.12
141	ER16b	ExonRegion	0	30.46	29.75	36.66	20.50	20.50	14.81
142	E16_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
143	E16_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
144	E16b_E16b	NovelJunction	0	42.36	24.58	38.08	35.12	55.27	32.24
145	ER16c	ExonRegion	0	33.78	22.85	32.59	21.54	36.16	22.21
146	E16c_E17a	KnownJunction	0	27.78	13.50	35.92	25.17	57.68	29.13
147	ER16d	ExonRegion	0	36.44	19.90	41.49	28.14	36.98	20.54
148	E17_Ab	NovelBoundary	1	62.06	17.89	47.48	31.59	17.81	12.17
149	ER17a	ExonRegion	1	57.10	17.79	41.66	27.72	30.97	14.81
150	ER17b	ExonRegion	0	59.74	22.75	35.77	29.32	17.15	17.38
151	E17_Da	KnownBoundary	0	41.28	33.69	16.11	17.51	32.38	53.90
152	ER17c	ExonRegion	0	34.60	29.79	26.07	21.64	21.12	25.81
153	E17_Db	NovelBoundary	0	0.00	0.00	6.72	9.52	0.00	0.00
154	E17b_E18a	KnownJunction	1	51.64	58.55	17.31	15.33	90.39	27.96
155	E17b_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
156	E18_Aa	NovelBoundary	0	0.00	0.00	9.68	2.45	0.00	0.00
157	ER18a	ExonRegion	0	66.44	55.97	28.88	19.26	50.66	26.39
158	E18_Da	KnownBoundary	0	36.64	31.22	2.96	5.33	45.70	22.84
159	E18_Db	KnownBoundary	0	3.62	0.00	0.00	0.00	0.00	0.00
160	E18b_E18b	KnownJunction	0	40.19	46.35	42.01	26.04	14.40	15.28
161	E18_Ab	KnownBoundary	0	55.13	23.29	19.81	29.91	58.02	22.58
162	ER18b	ExonRegion	0	80.23	61.29	36.93	23.70	63.28	31.47
163	ER18c	ExonRegion	0	73.90	60.66	36.93	23.70	62.20	33.69
164	ER18d	ExonRegion	0	54.34	50.81	30.89	27.16	59.62	34.89
165	E18c_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
166	E18d_E19b	KnownJunction	0	27.42	50.28	9.68	16.86	84.90	59.53
167	E18d_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
168	ER18e	ExonRegion	0	32.94	35.32	8.69	18.53	58.94	33.32
169	ER19a	ExonRegion	0	3.92	5.34	1.24	2.77	8.01	4.23
170	ER19b	ExonRegion	0	28.75	38.06	6.24	16.45	29.82	21.69
171	E19_Da	NovelBoundary	0	15.61	4.72	8.94	0.00	0.00	0.00
172	E19a_E20a	KnownJunction	0	55.25	51.69	3.47	3.15	55.10	40.55
173	E19a_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
174	I19	Intron	0	15.09	7.76	5.64	2.80	10.28	2.86
175	I19_AR1	ActiveIntronRegion	0	27.68	15.70	6.71	4.54	22.71	6.20
176	E20_Aa	NovelBoundary	1	37.30	6.02	3.53	0.00	43.20	15.28
177	ER20a	ExonRegion	0	91.61	61.95	10.84	8.09	95.25	43.52
178	E20_Da	NovelBoundary	0	6.99	0.00	6.77	5.00	8.99	17.38
179	E20a_E21a	KnownJunction	0	118.22	69.69	12.24	5.22	112.03	132.48
180	E20a_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
181	E21_Aa	NovelBoundary	0	6.21	3.49	8.82	10.55	5.16	0.00
182	ER21a	ExonRegion	0	128.68	52.99	13.36	2.55	63.79	47.08
183	E21a_E22a	KnownJunction	1	182.76	105.85	20.04	0.00	148.99	93.70
184	ER22a	ExonRegion	0	169.35	80.70	14.71	8.58	110.70	76.97
185	E22a_E23a	KnownJunction	0	132.68	79.59	0.00	0.00	182.45	118.55
186	ER23a	ExonRegion	0	117.38	85.22	3.89	0.37	87.90	63.40
187	E23_Da	KnownBoundary	0	146.42	114.07	6.15	0.00	167.30	120.73
188	ER23b	ExonRegion	0	139.58	99.58	10.43	7.89	324.18	178.45
189	E23_Db	KnownBoundary	0	152.93	104.05	3.19	2.99	628.18	562.09
190	ER23c	ExonRegion	0	97.24	73.11	2.83	0.98	200.89	249.98
191	E23_Dc	KnownBoundary	1	56.58	41.40	3.53	0.00	103.30	292.00
192	ER23d	ExonRegion	0	38.75	27.34	5.33	3.61	258.68	206.67
193	E23_Dd	KnownBoundary	0	0.00	0.00	2.62	0.00	8.82	5.04
194	E23_De	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
195	E23_Df	KnownBoundary	0	3.74	0.00	2.45	0.00	0.00	0.00
196	ER23e	ExonRegion	0	9.71	2.08	4.35	2.15	19.53	11.85
197	ER23f	ExonRegion	0	5.28	0.00	4.35	0.00	9.04	1.85
198	ER23g	ExonRegion	0	1.29	0.00	2.17	0.00	3.39	0.57