Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	EPHA4	Gene	0	79.41	16.19	100.46	29.85	204.69	34.79
2	409938	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
3	434266	Transcript	0	0.01	1.70	2.57	1.77	0.00	0.00
4	392071	Transcript	0	0.00	0.00	1.66	0.00	0.00	0.00
5	415749	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
6	443796	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
7	281821	Transcript	0	0	0	0	0	0	0
8	409854	Transcript	0	11.11	3.12	33.05	8.13	138.14	44.56
9	419964	Transcript	0	0.00	0.00	0.00	0.00	0.80	0.00
10	441679	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
11	463446	Transcript	0	0.02	0.00	2.36	4.55	0.00	0.00
12	495693	Transcript	0	16.63	3.55	16.26	8.04	6.03	0.63
13	424339	Transcript	0	0.00	0.00	0.00	0.00	9.74	0.00
14	426308	Transcript	0	1.76	0.35	9.05	2.51	26.97	3.39
15	469354	Transcript	0	4.22	1.04	1.09	0.00	0.00	0.00
16	472696	Transcript	0	0.69	0.00	0.02	0.09	0.01	0.00
17	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
18	E1_Ab	KnownBoundary	0	19.52	9.45	3.53	0.00	18.31	0.00
19	ER1b	ExonRegion	0	0.00	0.00	0.84	0.00	0.00	0.00
20	E1_Da	KnownBoundary	0	3.74	0.00	0.00	0.00	4.16	0.00
21	E1a_E2e	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
22	ER1c	ExonRegion	0	0.02	0.41	2.70	0.49	0.00	0.00
23	E1_Db	NovelBoundary	0	10.24	5.85	0.00	0.00	21.06	0.00
24	E1b_E2e	KnownJunction	0	0.00	2.98	2.45	3.04	0.00	0.00
25	ER2a	ExonRegion	0	0.00	0.00	1.66	0.00	0.00	0.00
26	E2_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
27	E2_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
28	E2_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
29	E2_Ae	KnownBoundary	0	0.00	0.00	3.53	0.00	0.00	0.00
30	ER2b	ExonRegion	0	0.00	0.00	5.00	0.00	0.00	0.00
31	ER2c	ExonRegion	0	0.00	0.00	11.79	2.15	0.00	0.00
32	ER2d	ExonRegion	0	3.17	1.04	19.55	5.39	0.00	0.00
33	ER2e	ExonRegion	0	6.45	2.03	50.29	22.16	3.26	5.72
34	E2a_E4a	KnownJunction	0	0.00	0.00	40.82	13.92	0.00	0.00
35	E2a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
36	E2a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
37	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	1.60	0.00
38	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
39	ER4a	ExonRegion	0	2.48	2.41	97.76	41.15	0.69	0.00
40	E4_Da	NovelBoundary	0	0.00	0.00	3.19	6.74	4.91	20.57
41	E4a_E5a	KnownJunction	0	13.14	9.17	189.96	88.03	4.25	0.00
42	ER5a	ExonRegion	0	9.08	9.69	127.58	62.18	0.89	0.00
43	E5_Da	KnownBoundary	0	6.57	23.74	164.06	55.57	0.00	0.00
44	ER5b	ExonRegion	0	10.08	11.62	190.24	58.52	4.05	0.00
45	E5_Db	KnownBoundary	0	0.00	0.00	33.59	3.04	14.15	0.00
46	E5_Dc	KnownBoundary	0	8.26	5.17	27.10	0.00	8.07	0.00
47	ER5c	ExonRegion	0	8.45	7.27	170.00	30.70	9.04	0.00
48	ER5d	ExonRegion	0	10.24	6.64	139.35	30.08	5.47	0.00
49	E5d_E7b	KnownJunction	0	3.19	0.00	111.86	30.99	0.00	0.00
50	Ix_AR2	ActiveIntronRegion	0	3.78	0.26	8.43	2.48	91.66	35.55
51	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
52	E6a_E7b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
53	ER7a	ExonRegion	0	0.02	0.00	2.36	4.55	0.00	0.00
54	E7_Ab	KnownBoundary	0	0.00	0.00	6.03	5.00	0.00	0.00
55	ER7b	ExonRegion	0	6.31	1.31	114.67	37.39	0.00	0.00
56	E7_Da	NovelBoundary	0	0.00	8.10	6.43	0.00	0.00	0.00
57	E7a_E8a	KnownJunction	0	3.74	3.26	68.60	22.73	0.00	0.00
58	Ix_AR1	ActiveIntronRegion	0	0.72	0.00	9.43	6.38	4.72	0.08
59	ER8a	ExonRegion	0	4.66	8.56	115.50	50.09	2.69	0.97
60	E8_Da	KnownBoundary	0	3.25	12.94	166.91	62.15	13.48	9.57
61	ER8b	ExonRegion	0	3.79	11.76	168.07	55.72	2.10	2.06
62	E8b_E9a	KnownJunction	0	2.89	8.66	106.11	37.35	4.16	0.00
63	Ix_AR1	ActiveIntronRegion	0	15.40	5.35	4.97	2.85	84.00	31.19
64	ER9a	ExonRegion	1	3.31	20.55	95.00	37.79	1.81	0.00
65	E9_Da	KnownBoundary	0	7.29	29.14	80.89	38.88	4.25	0.00
66	ER9b	ExonRegion	0	6.11	15.53	71.59	27.84	2.42	0.00
67	E9_Db	NovelBoundary	0	15.37	12.26	81.97	21.26	4.58	0.00
68	E9c_E10a	KnownJunction	0	10.30	14.79	143.79	48.61	5.16	0.00
69	ER9c	ExonRegion	0	10.46	12.65	122.04	36.15	3.62	0.00
70	E10_Aa	NovelBoundary	0	0.00	0.00	58.86	27.08	0.00	0.00
71	ER10a	ExonRegion	0	9.25	11.92	151.56	33.88	4.40	0.44
72	E10_Da	NovelBoundary	0	5.30	7.54	61.25	12.67	0.00	0.00
73	E10a_E11a	KnownJunction	0	26.15	13.11	151.54	50.19	8.99	5.21
74	I10	Intron	0	0.85	0.17	20.20	5.23	0.00	0.00
75	I10_SR1	SilentIntronRegion	0	0.86	0.17	20.24	5.24	0.00	0.00
76	E11_Aa	NovelBoundary	0	0.00	2.92	11.90	9.95	0.00	0.00
77	ER11a	ExonRegion	0	9.75	8.25	80.03	22.23	5.86	0.63
78	E11_Da	NovelBoundary	0	0.00	0.00	22.83	18.60	0.00	0.00
79	E11a_E12a	KnownJunction	0	3.74	10.46	136.91	22.18	15.90	0.00
80	I11_SR1	SilentIntronRegion	0	2.62	0.27	17.91	7.91	5.41	2.06
81	I11_AR1	ActiveIntronRegion	0	3.75	0.57	18.78	9.41	18.43	19.95
82	I11_AR2	ActiveIntronRegion	0	1.11	0.00	11.44	7.50	5.78	2.90
83	I11_AR3	ActiveIntronRegion	0	1.18	0.00	15.29	9.13	7.02	3.70
84	ER12a	ExonRegion	0	16.39	16.34	168.54	35.56	7.45	1.07
85	E12a_E13a	KnownJunction	0	40.19	33.52	227.08	46.43	11.90	8.06
86	ER13a	ExonRegion	0	18.95	16.27	131.67	24.64	13.75	2.66
87	E13a_E14a	KnownJunction	1	16.69	39.37	102.92	23.87	25.80	9.07
88	ER14a	ExonRegion	0	22.01	7.39	106.36	21.77	38.79	12.17
89	E14a_E15b	KnownJunction	0	20.55	0.00	64.55	13.70	20.14	14.61
90	I14	Intron	0	21.16	4.41	9.27	3.61	36.70	14.23
91	I14_AR1	ActiveIntronRegion	0	25.82	2.94	11.16	3.00	20.14	2.40
92	I14_SR2	SilentIntronRegion	0	22.27	5.38	8.33	3.53	45.48	18.98
93	E15_Aa	NovelBoundary	0	58.75	12.54	26.24	22.51	22.22	0.00
94	ER15a	ExonRegion	0	16.63	3.55	16.26	8.04	6.03	0.63
95	E15_Ab	KnownBoundary	0	13.86	6.07	3.53	6.14	18.73	5.21
96	ER15b	ExonRegion	0	17.13	1.84	49.65	23.17	46.42	13.14
97	E15a_E16a	KnownJunction	0	18.32	0.00	35.41	19.52	169.38	32.41
98	ER16a	ExonRegion	0	25.07	11.78	79.70	24.45	121.97	15.75
99	E16_Da	KnownBoundary	0	19.52	23.90	90.06	40.40	170.72	26.87
100	ER16b	ExonRegion	0	15.47	10.10	93.19	29.57	106.67	17.71
101	E16b_E17a	KnownJunction	0	19.16	2.53	103.09	17.62	236.80	33.67
102	ER17a	ExonRegion	0	20.38	9.42	84.12	20.09	183.79	24.37
103	E17_Ab	KnownBoundary	0	27.90	21.77	70.08	27.02	481.35	54.82
104	ER17b	ExonRegion	0	29.16	19.36	99.51	39.02	266.08	41.04
105	E17_Da	NovelBoundary	0	19.04	0.00	3.53	8.92	250.04	37.53
106	E17a_E18a	KnownJunction	0	29.04	18.45	102.35	28.11	733.30	99.15
107	E17a_E19b	KnownJunction	0	0.00	0.00	0.00	0.00	9.74	0.00
108	I17_SR1	SilentIntronRegion	0	12.43	3.71	3.67	4.21	126.69	32.31
109	I17_AR1	ActiveIntronRegion	0	14.50	0.00	6.52	3.88	153.92	64.55
110	I17_AR2	ActiveIntronRegion	0	12.97	0.00	5.90	0.62	180.02	67.70
111	I17_AR3	ActiveIntronRegion	0	23.06	4.35	8.75	3.71	299.32	186.72
112	ER18a	ExonRegion	0	23.71	8.97	91.02	22.90	232.82	50.55
113	E18a_E19b	KnownJunction	1	29.40	0.00	108.78	27.35	708.33	95.88
114	ER19a	ExonRegion	0	3.52	0.69	18.10	5.03	53.94	6.79
115	ER19b	ExonRegion	0	27.17	2.33	91.67	19.15	351.01	92.27
116	E19_Da	NovelBoundary	0	9.10	10.29	27.72	8.97	186.61	41.22
117	E19a_E20a	KnownJunction	0	44.83	3.49	110.21	37.08	640.58	273.53
118	E19a_E20b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
119	E19b_E20a	KnownJunction	0	11.15	0.00	33.13	6.52	179.21	61.54
120	ER19c	ExonRegion	0	11.07	6.23	32.96	9.73	97.07	27.58
121	E20_Aa	NovelBoundary	0	0.00	0.00	5.92	0.00	59.60	36.52
122	ER20a	ExonRegion	1	42.76	3.40	143.11	46.65	356.24	257.96
123	E20_Ab	KnownBoundary	0	44.47	2.76	164.80	49.64	578.15	683.07
124	ER20b	ExonRegion	0	49.67	7.67	185.37	38.49	307.33	236.43
125	E20_Da	KnownBoundary	0	13.14	3.49	110.49	23.98	11.57	14.94
126	E20_Db	KnownBoundary	0	0.00	0.00	3.53	0.00	0.00	0.00
127	E20_Dc	KnownBoundary	0	50.13	27.28	197.36	46.82	8.91	0.00
128	ER20c	ExonRegion	0	39.54	23.99	220.41	54.84	9.86	4.38
129	ER20d	ExonRegion	0	39.41	24.93	212.91	53.86	10.85	3.70
130	ER20e	ExonRegion	0	43.64	16.92	165.67	50.27	21.12	6.47
131	E20_Dd	KnownBoundary	0	24.40	13.27	162.35	61.88	29.96	3.78
132	E20_Ac	KnownBoundary	0	18.68	6.97	100.99	33.66	10.24	10.33
133	ER20f	ExonRegion	0	32.02	14.11	190.00	66.87	16.57	6.40
134	E20_De	KnownBoundary	0	7.29	3.49	31.42	9.90	0.00	5.21
135	ER20g	ExonRegion	0	32.37	16.62	177.24	64.09	13.86	5.55
136	E20_Ad	KnownBoundary	0	33.02	6.97	68.03	22.89	42.70	0.00
137	ER20h	ExonRegion	0	37.91	12.47	131.86	43.83	19.34	5.07
138	ER20i	ExonRegion	0	47.24	7.67	126.51	36.54	34.01	2.46
139	E20f_E21a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
140	E20f_E22a	KnownJunction	0	73.15	6.36	174.59	53.01	84.57	7.81
141	E21_Aa	NovelBoundary	1	18.44	24.02	14.06	0.00	63.09	129.71
142	ER21a	ExonRegion	0	2.06	0.00	0.05	0.26	0.02	0.00
143	E21a_E22a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
144	ER22a	ExonRegion	0	70.93	12.37	233.52	81.06	84.37	14.00
145	E22_Da	KnownBoundary	0	147.69	24.02	494.57	156.97	241.38	23.59
146	ER22b	ExonRegion	0	208.75	34.37	101.66	29.51	522.61	68.06
147	ER22c	ExonRegion	0	4.22	1.04	1.09	0.00	0.00	0.00