Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	NCKAP1	Gene	0	232.32	50.45	208.96	72.54	276.32	88.28
2	456371	Transcript	0	0.59	0.00	0.60	0.12	0.30	0.21
3	360982	Transcript	0	0	0	0	0	0	0
4	361354	Transcript	0	14.94	5.96	24.19	14.52	0.00	4.53
5	495619	Transcript	0	0.69	0.01	14.60	8.99	0.00	0.00
6	493359	Transcript	0	2.08	0.31	16.19	1.65	6.62	0.01
7	478449	Transcript	0	2.95	0.02	0.62	0.60	0.00	0.00
8	471640	Transcript	0	2.39	0.00	0.08	0.00	3.48	0.93
9	492058	Transcript	0	2.01	0.93	2.63	2.04	26.25	11.14
10	477988	Transcript	0	4.02	1.62	6.99	8.31	5.09	0.76
11	ER1a	ExonRegion	0	1.66	3.51	0.85	0.00	0.71	1.09
12	E1_Ab	KnownBoundary	0	3.13	3.49	0.00	0.00	0.00	0.00
13	ER1b	ExonRegion	0	9.85	7.94	36.90	11.73	0.07	0.09
14	E1a_E2a	KnownJunction	0	17.90	15.02	81.86	18.60	0.00	0.00
15	E1a_E3a	KnownJunction	0	14.94	5.96	24.19	14.52	0.00	4.53
16	E2a_E3a	KnownJunction	1	51.28	17.10	226.39	37.08	5.16	0.00
17	ER2a	ExonRegion	0	41.99	21.12	185.15	34.95	1.81	0.00
18	ER3a	ExonRegion	0	59.21	35.21	365.22	132.17	1.86	0.90
19	E3a_E4a	KnownJunction	0	40.01	27.56	180.23	82.76	0.00	0.00
20	I3_AR1	ActiveIntronRegion	1	6.93	0.32	9.85	7.07	3.96	50.37
21	ER4a	ExonRegion	0	67.49	30.36	456.83	152.95	1.71	3.66
22	E4a_E5a	KnownJunction	0	89.78	20.19	483.24	236.58	10.15	5.21
23	ER5a	ExonRegion	0	72.75	17.79	482.98	263.84	5.93	2.63
24	E5a_E6a	KnownJunction	0	84.42	17.60	373.26	226.35	15.48	4.95
25	ER6a	ExonRegion	0	81.49	13.35	458.47	211.70	3.59	4.14
26	E6a_E7a	KnownJunction	0	109.06	15.30	679.18	237.28	24.06	18.30
27	ER7a	ExonRegion	0	74.94	36.03	494.83	194.35	24.60	4.60
28	E7a_E8a	KnownJunction	0	79.36	26.38	287.64	130.44	28.80	18.72
29	ER8a	ExonRegion	0	56.20	36.90	491.81	171.46	8.94	4.40
30	E8a_E9a	KnownJunction	0	40.97	19.01	553.83	134.41	7.74	0.00
31	ER9a	ExonRegion	0	34.43	20.52	523.53	145.74	1.14	0.00
32	E9_Da	NovelBoundary	0	11.21	2.70	73.21	23.60	0.00	0.00
33	E9a_E10a	KnownJunction	0	38.50	22.39	503.22	145.61	0.00	0.00
34	ER10a	ExonRegion	0	45.43	34.17	450.36	143.63	0.15	0.00
35	E10a_E11a	KnownJunction	0	41.94	23.74	223.89	77.75	3.58	0.00
36	E11_Aa	NovelBoundary	0	14.16	18.90	22.49	9.46	0.00	0.00
37	ER11a	ExonRegion	0	42.71	19.24	265.69	90.52	5.14	0.00
38	E11a_E12a	KnownJunction	0	62.97	17.83	309.45	105.81	18.56	0.00
39	ER12a	ExonRegion	0	56.83	41.49	270.33	84.66	3.82	0.00
40	E12a_E13a	KnownJunction	0	49.71	27.50	108.16	60.79	0.00	9.57
41	ER13a	ExonRegion	0	50.83	27.34	191.36	61.22	7.60	0.00
42	E13a_E14a	KnownJunction	0	51.04	17.38	239.37	81.72	9.49	0.00
43	ER14a	ExonRegion	0	44.35	24.40	148.11	62.25	4.92	0.06
44	E14a_E15a	KnownJunction	0	51.40	20.59	174.70	68.24	21.23	0.00
45	ER15a	ExonRegion	0	40.14	11.73	99.01	43.64	12.37	1.63
46	E15a_E16a	KnownJunction	0	51.88	18.67	78.78	18.65	21.64	0.00
47	ER16a	ExonRegion	0	46.81	11.41	123.28	48.12	15.05	0.00
48	E16a_E17a	KnownJunction	1	61.76	5.74	169.13	85.20	31.38	0.00
49	I16_AR2	ActiveIntronRegion	0	3.42	4.16	29.90	16.93	0.00	0.00
50	ER17a	ExonRegion	0	71.35	19.18	281.01	126.94	19.43	0.96
51	E17a_E18a	KnownJunction	0	121.24	43.48	661.08	245.44	20.14	0.00
52	ER18a	ExonRegion	0	90.83	24.70	439.28	184.55	12.01	3.04
53	E18_Ab	KnownBoundary	0	93.70	21.32	306.15	138.60	20.64	10.41
54	ER18b	ExonRegion	0	60.60	16.03	264.58	135.40	17.16	1.64
55	E18a_E19a	KnownJunction	0	70.74	23.79	540.00	165.84	8.49	0.00
56	ER19a	ExonRegion	0	86.60	28.62	416.27	158.43	12.79	2.30
57	E19a_E20a	KnownJunction	1	124.01	50.00	280.81	106.90	39.62	0.00
58	ER20a	ExonRegion	0	108.60	48.76	591.96	197.07	14.79	3.41
59	E20_Da	KnownBoundary	0	3.49	0.00	2.56	13.81	0.00	0.00
60	E20a_E21b	KnownJunction	0	135.40	44.72	491.84	234.89	51.44	7.22
61	ER20b	ExonRegion	0	0.69	0.01	14.60	8.99	0.00	0.00
62	ER21a	ExonRegion	0	2.08	0.31	16.19	1.65	6.62	0.01
63	E21_Ab	KnownBoundary	0	0.00	3.49	43.72	0.00	18.64	0.00
64	ER21b	ExonRegion	0	117.65	44.74	475.07	168.24	30.43	10.22
65	E21a_E22a	KnownJunction	0	166.61	66.26	1390.97	367.67	53.10	13.60
66	ER22a	ExonRegion	0	140.01	50.64	940.90	258.98	32.20	8.62
67	E22_Da	KnownBoundary	0	123.65	23.45	311.55	87.81	65.01	21.91
68	ER22b	ExonRegion	0	141.08	29.90	418.02	148.38	41.12	6.54
69	E22b_E23a	KnownJunction	1	191.25	56.47	629.37	251.31	76.74	8.82
70	E22b_E24a	NovelJunction	0	0.00	0.00	0.00	6.25	0.00	0.00
71	ER23a	ExonRegion	1	167.55	37.46	439.41	157.82	65.83	8.52
72	E23a_E24a	KnownJunction	1	224.09	72.61	645.88	236.90	155.40	8.82
73	ER24a	ExonRegion	1	209.54	42.70	425.17	123.17	152.35	19.19
74	E24a_E26a	KnownJunction	1	232.29	58.72	579.22	157.57	292.91	37.61
75	ER25a	ExonRegion	0	5.90	0.03	1.23	1.20	0.00	0.00
76	E25_Da	NovelBoundary	1	0.00	25.65	5.81	0.00	0.00	4.28
77	E25a_E26a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
78	ER26a	ExonRegion	1	173.83	53.00	376.18	115.04	193.21	27.60
79	E26_Ab	KnownBoundary	1	171.19	61.03	213.53	63.24	422.92	63.89
80	ER26b	ExonRegion	0	163.43	56.35	180.54	37.59	210.39	33.36
81	E26a_E27b	KnownJunction	1	215.90	71.71	205.61	23.05	371.90	51.80
82	I26_AR1	ActiveIntronRegion	0	0.00	0.00	10.12	1.02	58.16	14.45
83	ER27a	ExonRegion	0	1.47	0.50	3.17	2.66	8.77	2.04
84	E27_Ab	KnownBoundary	0	0.00	0.00	0.00	2.39	5.16	4.62
85	E27_Da	KnownBoundary	0	357.26	81.27	489.45	106.84	458.46	94.37
86	E27a_E30a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
87	ER27b	ExonRegion	0	254.91	60.60	298.29	61.04	215.27	42.58
88	ER27c	ExonRegion	0	314.83	54.46	372.33	100.09	237.44	56.36
89	E27b_E28a	KnownJunction	0	293.27	48.93	330.05	112.12	411.02	94.95
90	E27c_E28a	KnownJunction	0	2.89	0.00	0.00	0.00	5.16	0.00
91	ER27d	ExonRegion	0	1.89	0.00	0.16	0.00	1.81	1.85
92	ER28a	ExonRegion	0	234.31	44.14	286.74	89.95	191.18	44.45
93	E28_Da	KnownBoundary	0	3.62	0.00	3.53	6.63	30.55	4.03
94	E28a_E29a	KnownJunction	1	257.78	69.86	255.82	90.48	226.07	22.75
95	ER28b	ExonRegion	0	2.54	1.36	2.09	1.43	43.73	20.24
96	E28_Db	NovelBoundary	0	1796.05	1006.90	550.13	337.28	7618.95	3959.64
97	I28_AR2	ActiveIntronRegion	0	7.41	1.51	7.36	4.69	49.44	30.47
98	ER29a	ExonRegion	1	348.21	95.41	221.29	68.83	234.64	30.92
99	E29_Da	NovelBoundary	1	476.87	86.28	254.97	64.21	644.99	86.22
100	E29b_E31a	KnownJunction	1	535.80	39.43	504.30	132.40	438.57	70.61
101	ER29b	ExonRegion	1	448.24	65.79	374.03	101.61	267.64	38.81
102	E30a_E32b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
103	ER30a	ExonRegion	0	1.76	0.00	1.81	0.36	0.90	0.62
104	ER31a	ExonRegion	0	343.12	72.23	302.20	112.43	270.13	49.40
105	E31a_E32a	KnownJunction	1	369.49	79.53	161.10	64.76	626.68	131.06
106	ER32a	ExonRegion	0	542.21	85.39	272.15	81.71	303.80	73.20
107	E32b_E33b	KnownJunction	0	626.96	78.74	300.85	88.46	526.71	136.01
108	ER32b	ExonRegion	0	574.81	69.60	275.37	87.52	424.43	84.00
109	ER32c	ExonRegion	0	539.45	66.48	255.27	84.02	688.85	132.36
110	ER33a	ExonRegion	0	4.02	1.62	6.99	8.31	5.09	0.76
111	E33_Ab	KnownBoundary	0	6.75	2.92	19.41	19.08	19.23	0.00
112	ER33b	ExonRegion	0	556.35	98.16	181.64	77.02	864.99	143.73
113	E33a_E34a	KnownJunction	1	854.67	115.30	124.10	74.33	1274.33	175.47
114	ER34a	ExonRegion	0	701.67	113.48	174.97	67.46	733.86	152.29
115	E34_Da	KnownBoundary	0	858.17	155.18	88.86	66.99	1706.08	354.88
116	ER34b	ExonRegion	0	1282.49	249.79	252.01	67.30	1882.04	665.29
117	ER34c	ExonRegion	0	1.51	0.00	0.00	0.00	3.10	0.00
118	IG15_AR12	ActiveIntergenicRegion	0	11.91	0.00	0.00	0.00	16.42	8.15
119	IG15_SR9	SilentIntergenicRegion	0	10.52	0.85	3.53	1.76	18.58	11.06
120	IG15_SR8	SilentIntergenicRegion	0	2.55	1.62	7.87	5.20	22.09	2.76
121	IG15_AR10	ActiveIntergenicRegion	0	15.19	4.42	10.65	3.79	15.93	1.97
122	IG15_AR9	ActiveIntergenicRegion	0	8.49	0.00	15.36	1.10	13.45	0.00
123	IG15_AR8	ActiveIntergenicRegion	0	3.55	0.98	15.24	4.03	19.24	10.23
124	IG15_AR6	ActiveIntergenicRegion	0	1.39	0.00	9.02	2.45	0.00	0.61
125	IG15_AR4	ActiveIntergenicRegion	0	3.51	0.68	1.42	2.11	9.18	2.83
126	IG15_SR4	SilentIntergenicRegion	0	4.13	2.24	1.25	0.74	22.90	16.33