Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	CLK1	Gene	0	129.29	69.23	53.81	43.79	124.20	87.57
2	422134	Transcript	0	0.00	0.04	0.00	0.00	0.00	0.00
3	357369	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
4	321356	Transcript	0	0.00	8.31	0.00	0.00	0.00	0.00
5	473565	Transcript	0	0	0	0	0	0	0
6	409403	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
7	482590	Transcript	0	1.47	2.27	10.33	6.67	0.02	0.02
8	494281	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
9	492793	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
10	432425	Transcript	0	0	0	0	0	0	0
11	434813	Transcript	0	0.00	3.06	1.07	0.00	0.00	1.13
12	481641	Transcript	0	0	0	0	0	0	0
13	461981	Transcript	0	10.38	9.22	8.57	4.84	4.94	2.06
14	409769	Transcript	1	17.65	1.52	21.98	13.09	4.29	2.94
15	496205	Transcript	0	31.24	8.19	8.64	2.17	17.79	14.52
16	461326	Transcript	1	19.23	5.76	1.39	1.34	35.11	9.67
17	464454	Transcript	0	0	0	0	0	0	0
18	472679	Transcript	0	0	0	0	0	0	0
19	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
20	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
21	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
22	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
23	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
24	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
25	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
26	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
27	ER5a	ExonRegion	0	0.00	0.42	0.00	0.00	0.00	0.00
28	E5_Da	NovelBoundary	1	305.20	58.21	51.57	22.18	383.30	114.52
29	E5a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
30	ER6a	ExonRegion	0	2.11	0.00	1.69	1.68	0.00	0.00
31	E6_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
32	ER6b	ExonRegion	0	3.93	1.29	9.96	9.73	0.00	1.21
33	E6_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
34	E6_Ae	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
35	E6_Af	KnownBoundary	0	3.43	3.04	3.07	9.73	0.00	4.62
36	ER6c	ExonRegion	0	6.33	2.08	10.86	15.08	0.00	1.85
37	ER6d	ExonRegion	0	6.33	2.08	10.86	15.08	0.00	1.85
38	ER6e	ExonRegion	0	6.33	2.08	10.86	15.08	0.00	1.85
39	ER6f	ExonRegion	0	44.68	19.47	87.37	59.08	0.00	2.52
40	E6a_E8a	KnownJunction	0	32.60	8.61	78.39	43.88	0.00	0.00
41	E6a_E8b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
42	ER7a	ExonRegion	0	0.00	3.06	1.07	0.00	0.00	1.13
43	E7_Ab	KnownBoundary	0	0.00	0.00	3.47	0.00	0.00	8.23
44	ER7b	ExonRegion	0	2.13	0.00	3.77	0.00	0.00	3.26
45	E7a_E8a	KnownJunction	0	0.00	0.00	3.30	0.00	0.00	0.00
46	Ix_AR1	ActiveIntronRegion	0	5.87	4.81	7.55	11.48	0.84	1.29
47	ER8a	ExonRegion	0	45.35	35.94	110.00	119.17	2.11	2.04
48	E8_Da	KnownBoundary	0	2.83	0.00	4.78	4.84	0.00	0.00
49	E8a_E8b	KnownJunction	0	59.23	77.39	241.76	177.58	5.16	4.45
50	ER8b	ExonRegion	0	1.47	2.27	10.33	6.67	0.02	0.02
51	E8_Ab	KnownBoundary	0	0.00	0.00	15.88	5.38	0.00	0.00
52	ER8c	ExonRegion	0	49.08	59.88	141.94	161.57	10.47	9.62
53	E8_Db	KnownBoundary	0	51.58	70.81	97.80	90.64	31.63	8.31
54	ER8d	ExonRegion	0	44.14	48.67	129.17	122.81	17.25	12.37
55	E8_Dc	KnownBoundary	1	32.48	12.82	96.09	25.23	4.00	8.14
56	E8c_E8d	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
57	E8c_E8e	KnownJunction	0	26.39	10.46	8.77	20.34	9.99	28.13
58	E8c_E8f	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
59	E8c_E8g	KnownJunction	0	6.33	3.49	5.52	8.70	5.16	5.21
60	ER8e	ExonRegion	0	27.05	11.68	48.56	30.07	6.85	1.46
61	E8_Dd	KnownBoundary	0	40.31	8.77	70.76	39.15	9.57	0.00
62	ER8f	ExonRegion	0	27.35	19.51	52.55	36.18	9.72	0.00
63	E8_Ac	KnownBoundary	0	9.16	15.86	31.65	29.42	22.14	0.00
64	E8_De	KnownBoundary	0	44.59	9.90	36.77	19.08	12.82	0.00
65	ER8g	ExonRegion	0	33.90	15.81	44.42	32.19	14.16	0.00
66	ER8h	ExonRegion	0	65.31	27.28	92.88	56.50	22.54	3.03
67	E8_Ad	KnownBoundary	1	111.05	52.87	119.77	56.06	150.91	49.20
68	ER8i	ExonRegion	0	101.75	55.47	124.63	61.93	56.95	20.99
69	E8_Ae	KnownBoundary	1	117.50	35.72	101.90	29.85	143.75	29.30
70	ER8j	ExonRegion	0	114.34	68.17	103.41	78.61	58.88	20.26
71	E8_Df	KnownBoundary	1	99.78	48.09	19.35	22.02	102.63	26.78
72	E8f_E8g	KnownJunction	0	20.43	15.30	24.48	21.69	21.31	7.98
73	ER8k	ExonRegion	1	89.08	43.00	42.23	28.02	73.55	21.31
74	E8_Dg	KnownBoundary	1	111.59	34.48	54.82	21.10	96.05	23.26
75	ER8l	ExonRegion	1	156.54	55.43	67.17	53.28	263.91	60.92
76	E8_Af	KnownBoundary	1	139.85	38.08	88.12	64.16	104.63	38.70
77	E8_Ag	KnownBoundary	0	85.99	39.43	96.43	109.51	69.67	41.47
78	ER8m	ExonRegion	0	287.14	95.57	236.80	208.96	137.41	62.94
79	ER8n	ExonRegion	0	243.57	102.81	168.57	150.73	128.72	72.25
80	E8_Dh	NovelBoundary	0	11.39	0.00	6.72	19.52	0.00	0.00
81	E8h_E9b	KnownJunction	0	244.94	122.16	82.14	69.27	281.34	143.06
82	Ix	Intron	0	8.30	3.63	19.36	9.22	0.16	0.97
83	Ix_AR2	ActiveIntronRegion	0	8.66	2.62	30.49	12.57	0.00	1.17
84	E9_Aa	NovelBoundary	1	62.49	0.00	30.34	24.79	3.91	0.00
85	ER9a	ExonRegion	0	17.65	1.52	21.98	13.09	4.29	2.94
86	E9_Ab	KnownBoundary	0	26.03	0.00	26.70	30.99	8.16	8.98
87	ER9b	ExonRegion	0	403.27	156.05	197.23	208.46	211.27	81.79
88	E9_Da	NovelBoundary	0	3.37	0.00	19.98	29.47	0.00	0.00
89	E9a_E10a	KnownJunction	1	313.69	138.93	46.57	46.49	264.02	123.75
90	ER10a	ExonRegion	0	334.54	153.84	88.98	74.78	204.03	111.28
91	E10_Da	KnownBoundary	0	22.48	9.11	8.88	10.82	0.00	0.00
92	E10a_E10b	KnownJunction	0	442.58	151.41	53.51	67.42	288.83	139.28
93	E10a_E11a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	10.24
94	ER10b	ExonRegion	0	10.38	9.22	8.57	4.84	4.94	2.06
95	E10_Ab	KnownBoundary	0	18.74	3.49	0.00	2.50	36.04	18.89
96	ER10c	ExonRegion	0	407.11	170.36	81.35	90.66	190.59	129.41
97	E10b_E11a	KnownJunction	1	438.42	290.17	66.55	127.99	524.13	334.65
98	ER11a	ExonRegion	0	510.26	246.62	106.35	132.73	256.90	163.55
99	E11a_E12a	KnownJunction	0	711.87	350.13	130.87	141.59	433.82	281.59
100	E11a_E13b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
101	ER12a	ExonRegion	0	622.54	337.44	114.36	131.93	520.07	338.28
102	E12a_E13b	KnownJunction	0	622.08	393.15	57.95	69.87	822.95	654.10
103	Ix	Intron	0	12.34	5.40	15.52	4.20	3.52	2.41
104	Ix_AR1	ActiveIntronRegion	0	12.56	5.49	15.79	4.27	3.58	2.45
105	E13_Aa	NovelBoundary	1	16.39	5.68	12.92	5.93	88.48	7.14
106	ER13a	ExonRegion	0	31.24	8.19	8.64	2.17	17.79	14.52
107	E13_Ab	KnownBoundary	0	31.27	20.81	5.69	6.69	45.53	35.43
108	ER13b	ExonRegion	0	728.92	354.71	126.94	121.18	417.92	324.17
109	E13a_E14d	KnownJunction	0	852.80	426.56	209.03	154.42	671.46	618.84
110	ER14a	ExonRegion	1	19.23	5.76	1.39	1.34	35.11	9.67
111	E14_Ab	KnownBoundary	0	20.25	20.59	7.06	0.00	40.62	27.45
112	E14_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
113	E14_Ad	KnownBoundary	0	13.44	14.51	0.00	0.00	13.57	0.00
114	ER14b	ExonRegion	0	28.97	24.70	4.35	0.00	24.11	7.61
115	ER14c	ExonRegion	0	404.32	205.68	99.94	77.55	199.78	182.34
116	ER14d	ExonRegion	0	731.32	432.71	103.56	66.09	663.74	550.76
117	E14a_E15a	KnownJunction	0	865.40	424.99	17.59	9.24	2191.92	1334.07
118	ER15a	ExonRegion	1	590.94	378.77	36.71	11.81	642.47	526.07
119	E15_Da	KnownBoundary	0	584.60	486.86	47.42	10.11	1476.68	1321.56
120	ER15b	ExonRegion	0	582.33	355.36	18.71	8.39	1219.61	938.31
121	E15_Db	KnownBoundary	0	544.84	310.98	17.87	8.81	2485.41	2750.41
122	ER15c	ExonRegion	0	324.90	227.80	10.01	4.14	741.46	1002.34
123	E15_Dc	KnownBoundary	0	193.84	210.64	3.53	0.00	586.14	881.71
124	ER15d	ExonRegion	0	172.52	171.89	3.61	2.26	816.74	780.30
125	E15_Dd	KnownBoundary	0	228.25	163.06	3.02	0.00	2547.09	2184.97
126	E15_De	KnownBoundary	0	2.89	8.21	3.53	0.00	12.24	21.83
127	E15_Df	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
128	ER15e	ExonRegion	0	100.78	63.71	4.49	3.16	951.01	827.86
129	E15_Dg	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
130	E15_Dh	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
131	E15_Di	KnownBoundary	0	2.53	7.26	5.64	0.00	90.48	76.99
132	ER15f	ExonRegion	0	54.63	26.75	6.38	2.15	557.99	479.35
133	ER15g	ExonRegion	0	25.34	18.70	6.52	2.15	99.44	103.67
134	ER15h	ExonRegion	0	7.92	14.54	6.52	2.15	66.90	70.35
135	ER15i	ExonRegion	0	6.33	14.54	6.52	2.15	52.43	51.83
136	ER15j	ExonRegion	1	2.27	14.26	4.11	0.78	38.16	37.16
137	ER15k	ExonRegion	0	0.00	8.31	0.00	0.00	0.00	0.00