Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	PTPN4	Gene	0	20.15	6.12	58.37	21.03	54.70	21.54
2	263708	Transcript	0	14.16	3.90	31.00	8.89	24.53	5.89
3	460162	Transcript	0	0.37	0.00	5.18	0.76	0.00	0.00
4	420482	Transcript	0	0.44	0.89	3.06	0.94	1.16	0.79
5	460289	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
6	488279	Transcript	0	0.72	0.05	21.66	8.69	1.89	0.02
7	485247	Transcript	0	0.00	0.00	6.26	0.00	0.00	0.00
8	433888	Transcript	0	0.00	0.00	4.75	1.28	0.00	0.00
9	430976	Transcript	0	6.71	1.20	5.02	1.53	39.17	19.91
10	488896	Transcript	0	0.61	0.04	7.77	3.35	1.36	0.00
11	431283	Transcript	0	0.00	0.00	0.02	0.00	0.00	0.98
12	469511	Transcript	0	1.72	0.91	9.10	3.10	5.88	1.50
13	441089	Transcript	0	0.72	0.04	1.90	0.50	9.27	7.27
14	IG24_AR7	ActiveIntergenicRegion	0	4.90	2.59	1.25	0.53	2.73	7.17
15	IG24_AR10	ActiveIntergenicRegion	0	24.69	7.95	0.56	0.56	58.90	34.63
16	ER1a	ExonRegion	0	2.05	0.92	4.27	0.39	2.01	0.00
17	E1_Ab	KnownBoundary	0	9.76	6.97	29.20	9.30	4.16	0.00
18	ER1b	ExonRegion	0	5.66	1.49	13.71	4.90	4.91	1.26
19	E1_Ac	KnownBoundary	0	3.07	0.00	11.95	3.04	8.91	0.00
20	ER1c	ExonRegion	0	1.28	0.00	7.28	3.86	0.93	0.00
21	E1_Ad	KnownBoundary	0	0.00	0.00	3.53	0.00	3.83	0.00
22	E1_Ae	KnownBoundary	0	3.62	0.00	9.11	3.26	0.00	0.00
23	ER1d	ExonRegion	0	2.11	0.00	6.52	2.15	0.00	0.00
24	ER1e	ExonRegion	0	3.44	0.00	8.26	1.61	0.18	0.15
25	E1_Af	KnownBoundary	0	3.74	0.00	10.19	0.00	0.00	0.00
26	ER1f	ExonRegion	0	4.11	2.12	33.64	6.96	6.22	3.80
27	E1_Da	NovelBoundary	0	12.11	0.00	0.00	3.10	37.71	35.09
28	E1a_E2a	KnownJunction	0	0.00	0.00	6.09	0.00	0.00	0.00
29	E1a_E3a	KnownJunction	0	0.00	0.00	3.53	0.00	0.00	0.00
30	E1a_E4a	KnownJunction	0	11.81	3.49	51.35	27.08	0.00	0.00
31	ER2a	ExonRegion	0	1.11	0.00	6.20	2.27	0.00	0.00
32	E2a_E4a	KnownJunction	0	0.00	0.00	3.24	0.00	0.00	0.00
33	ER3a	ExonRegion	0	1.31	2.68	2.63	2.81	3.49	2.38
34	E3_Da	NovelBoundary	0	292.84	216.26	87.15	51.98	341.60	424.40
35	E3a_E4a	KnownJunction	0	0.00	0.00	3.02	0.00	0.00	0.00
36	ER4a	ExonRegion	0	12.80	2.25	59.61	23.43	0.00	0.00
37	E4_Da	KnownBoundary	0	11.21	2.36	59.66	28.49	0.00	0.00
38	ER4b	ExonRegion	0	10.91	6.39	56.00	29.90	5.46	1.31
39	E4b_E5a	KnownJunction	0	8.80	7.42	70.70	36.32	8.41	0.00
40	ER5a	ExonRegion	0	8.64	2.05	74.61	21.54	7.63	0.13
41	E5_Da	NovelBoundary	0	6.15	2.92	89.26	27.57	0.00	0.00
42	E5b_E6a	KnownJunction	0	6.33	0.00	61.02	29.52	4.99	4.87
43	ER5b	ExonRegion	0	9.35	2.08	78.52	29.75	1.98	1.85
44	E6_Aa	NovelBoundary	0	0.00	0.00	19.47	2.83	0.00	0.00
45	ER6a	ExonRegion	0	14.39	3.04	67.85	32.56	4.63	1.85
46	E6a_E7a	KnownJunction	0	0.00	0.00	15.03	6.74	0.00	0.00
47	E6a_E7b	KnownJunction	0	23.44	6.52	68.14	32.46	10.32	0.00
48	ER7a	ExonRegion	0	0.77	0.19	16.20	7.54	0.33	0.08
49	ER7b	ExonRegion	1	13.24	2.56	86.90	33.92	13.68	0.12
50	E7a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
51	E7a_E9b	KnownJunction	1	3.43	0.00	144.42	33.55	24.97	0.00
52	E7a_E10a	NovelJunction	0	0.00	0.00	16.17	6.52	0.00	0.00
53	E7a_E10b	KnownJunction	0	0.00	0.00	6.26	0.00	0.00	0.00
54	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
55	ER9a	ExonRegion	0	2.11	0.00	55.40	20.47	7.23	0.00
56	ER9b	ExonRegion	0	2.50	2.27	141.76	56.74	7.40	0.00
57	E9a_E10a	KnownJunction	0	2.71	3.49	133.60	81.18	4.66	0.00
58	ER10a	ExonRegion	0	13.14	4.16	141.76	72.17	5.98	0.00
59	E10a_E11a	KnownJunction	0	27.78	2.42	183.58	65.52	15.48	0.00
60	ER10b	ExonRegion	0	19.87	2.44	146.58	63.23	7.44	0.00
61	E11_Aa	NovelBoundary	0	0.00	0.00	3.53	6.63	0.00	0.00
62	ER11a	ExonRegion	0	16.59	3.99	128.18	49.38	9.02	0.00
63	E11_Da	KnownBoundary	0	6.09	9.84	149.54	77.59	26.64	0.00
64	ER11b	ExonRegion	0	6.72	4.34	168.32	76.08	8.79	0.93
65	E11b_E12a	KnownJunction	0	6.99	0.00	196.73	89.39	8.32	4.45
66	E11b_E13a	KnownJunction	0	0.00	0.00	9.51	0.00	0.00	0.00
67	I11_SR2	SilentIntronRegion	0	0.74	0.00	15.86	3.37	1.26	0.00
68	E12_Aa	NovelBoundary	1	0.00	0.00	53.40	3.10	0.00	0.00
69	ER12a	ExonRegion	0	10.27	0.00	139.29	53.73	7.19	2.38
70	E12a_E13a	KnownJunction	0	6.27	0.00	107.82	32.52	17.73	4.03
71	I12_AR2	ActiveIntronRegion	0	3.89	0.00	3.12	1.32	15.92	6.07
72	I12_AR4	ActiveIntronRegion	0	0.62	0.00	11.96	5.83	2.32	0.57
73	E13_Aa	NovelBoundary	0	13.32	2.87	36.89	10.11	10.32	4.37
74	ER13a	ExonRegion	0	5.72	0.00	112.31	35.58	12.51	6.55
75	E13a_E14a	KnownJunction	0	7.35	0.00	137.36	56.38	32.21	27.12
76	E14_Aa	NovelBoundary	1	3.07	0.00	3.53	3.26	43.45	0.00
77	ER14a	ExonRegion	0	7.19	0.00	102.65	45.51	39.41	11.14
78	E14_Da	KnownBoundary	1	3.74	0.00	5.86	0.00	81.74	14.27
79	E14a_E15a	KnownJunction	0	5.97	0.00	111.74	43.93	0.00	0.00
80	ER14b	ExonRegion	0	10.82	2.40	6.75	3.05	78.34	39.83
81	E14_Db	NovelBoundary	1	3.74	0.00	8.82	0.00	32.38	0.00
82	E14b_E15a	KnownJunction	0	2.59	0.00	3.30	0.00	0.00	0.00
83	I14_AR1	ActiveIntronRegion	0	1.32	0.00	13.04	0.00	1.81	0.00
84	I14_AR2	ActiveIntronRegion	0	2.60	0.51	14.71	5.32	2.17	0.00
85	I14_SR2	SilentIntronRegion	0	0.00	1.19	1.86	0.00	11.11	3.17
86	I14_AR3	ActiveIntronRegion	0	3.47	5.33	4.55	0.51	28.60	9.48
87	ER15a	ExonRegion	0	10.50	1.83	147.77	53.27	9.71	7.19
88	E15_Da	NovelBoundary	0	0.00	0.00	8.60	2.94	0.00	14.52
89	E15a_E16a	KnownJunction	0	3.13	0.00	108.67	43.17	4.99	3.69
90	E15a_E17b	KnownJunction	0	0.00	0.00	0.00	2.56	0.00	0.00
91	I15	Intron	0	1.52	0.19	15.33	6.15	0.63	0.77
92	I15_SR1	SilentIntronRegion	0	2.59	0.16	25.05	10.77	0.83	1.56
93	I15_AR1	ActiveIntronRegion	0	2.83	0.20	18.77	9.55	0.55	1.61
94	ER16a	ExonRegion	0	7.37	7.23	115.62	65.66	6.81	0.35
95	E16_Da	NovelBoundary	0	3.74	0.00	30.00	8.65	0.00	0.00
96	E16a_E17b	KnownJunction	0	6.63	15.86	107.36	48.28	21.39	0.00
97	ER17a	ExonRegion	0	0.99	0.07	13.98	6.70	2.72	0.00
98	E17_Ab	KnownBoundary	0	2.77	0.00	26.87	15.77	4.08	0.00
99	ER17b	ExonRegion	0	9.95	6.51	144.14	70.92	10.71	1.74
100	E17_Ac	KnownBoundary	0	9.70	4.95	183.24	86.62	9.24	9.15
101	ER17c	ExonRegion	0	5.64	17.82	216.57	114.29	12.58	4.44
102	E17a_E18a	KnownJunction	1	3.25	43.20	229.81	107.44	15.98	0.00
103	ER18a	ExonRegion	0	8.67	21.70	159.52	87.93	11.58	2.43
104	E18_Da	KnownBoundary	0	2.95	0.00	2.50	0.00	0.00	0.00
105	E18a_E19a	KnownJunction	0	7.41	27.62	235.96	128.54	21.89	4.53
106	E18_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
107	ER18b	ExonRegion	0	2.11	0.00	8.69	0.00	0.00	0.00
108	ER18c	ExonRegion	0	0.23	0.00	1.57	0.00	0.00	0.00
109	E18_Dc	NovelBoundary	1	3.74	0.00	21.18	0.00	0.00	0.00
110	ER19a	ExonRegion	0	10.31	13.41	126.15	74.78	15.89	6.42
111	E19a_E20a	KnownJunction	0	14.10	11.47	69.96	40.62	13.23	0.00
112	ER20a	ExonRegion	1	11.21	14.05	74.05	41.26	36.44	6.06
113	E20a_E21a	KnownJunction	1	18.20	24.19	78.78	53.83	136.76	27.29
114	ER21a	ExonRegion	0	17.45	9.62	67.65	30.65	45.01	9.71
115	E21_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	4.70
116	E21a_E22a	KnownJunction	0	13.32	0.00	39.56	11.15	15.98	3.95
117	ER21b	ExonRegion	0	0.00	0.00	0.02	0.00	0.00	0.98
118	I21_AR1	ActiveIntronRegion	0	0.00	0.74	13.71	0.99	0.00	0.82
119	E22_Aa	NovelBoundary	0	0.00	0.00	19.53	2.66	5.16	0.00
120	ER22a	ExonRegion	0	9.00	6.99	37.28	16.08	44.91	10.67
121	E22_Da	NovelBoundary	1	3.74	6.52	35.81	3.37	0.00	0.00
122	E22a_E23a	KnownJunction	1	23.20	10.12	55.22	15.01	67.00	7.89
123	ER23a	ExonRegion	0	20.49	8.93	97.78	25.63	52.71	11.78
124	E23_Da	NovelBoundary	0	3.74	9.62	0.00	0.00	0.00	0.00
125	E23a_E24a	KnownJunction	0	29.77	9.67	124.38	33.44	107.71	34.34
126	ER24a	ExonRegion	0	11.86	8.13	125.46	37.19	81.36	26.24
127	E24_Da	NovelBoundary	0	0.00	0.00	41.56	5.87	8.16	0.00
128	E24a_E25a	KnownJunction	0	6.87	5.06	128.59	37.95	197.10	73.88
129	ER25a	ExonRegion	0	23.46	8.31	130.42	36.87	91.16	27.23
130	E25_Da	NovelBoundary	0	0.00	0.00	38.14	6.52	8.57	0.00
131	E25a_E26b	KnownJunction	1	34.71	18.28	189.51	60.19	189.86	39.71
132	ER26a	ExonRegion	0	1.72	0.91	9.10	3.10	5.88	1.50
133	E26_Ac	KnownBoundary	0	14.16	21.26	127.06	41.70	113.12	27.87
134	ER26b	ExonRegion	0	26.70	14.54	147.73	52.59	97.42	24.28
135	ER26c	ExonRegion	0	19.95	14.77	122.38	43.60	111.87	38.56
136	E26a_E27a	KnownJunction	1	54.95	37.12	113.96	30.12	223.82	44.33
137	ER27a	ExonRegion	0	37.46	21.98	110.51	40.93	137.58	65.58
138	E27a_E28a	KnownJunction	0	42.42	11.14	122.90	32.46	199.68	116.62
139	ER28a	ExonRegion	0	50.69	13.65	133.60	59.31	277.49	121.71
140	E28a_E29a	KnownJunction	0	44.53	6.64	63.02	41.98	814.71	392.08
141	ER29a	ExonRegion	1	49.85	7.04	80.20	42.07	471.33	258.91
142	E29_Da	KnownBoundary	0	57.42	9.11	92.05	36.59	874.72	537.41
143	ER29b	ExonRegion	1	44.34	6.48	102.82	50.24	343.92	231.09
144	E29b_E30a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
145	E29b_E30b	KnownJunction	1	47.12	3.37	59.49	36.70	541.70	650.75
146	E30_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	52.19	48.11
147	E30_Ab	NovelBoundary	0	0.00	0.00	3.30	0.00	37.29	9.49
148	ER30a	ExonRegion	0	1.43	0.07	3.80	1.00	18.53	14.55
149	ER30b	ExonRegion	0	40.35	7.55	46.46	22.13	478.35	337.89
150	E30_Da	KnownBoundary	1	56.22	3.09	57.55	33.28	298.82	199.56
151	ER30c	ExonRegion	0	41.80	9.45	74.41	25.53	110.16	61.79
152	E30_Db	KnownBoundary	0	4.94	0.00	86.47	22.73	0.00	0.00
153	ER30d	ExonRegion	0	26.27	6.88	57.72	17.40	47.04	11.78
154	IG25	Intergenic	0	50.57	7.72	11.03	3.45	158.23	32.14
155	IG25_AR1	ActiveIntergenicRegion	0	87.21	13.74	17.11	4.79	295.83	61.09
156	IG25_SR1	SilentIntergenicRegion	0	18.82	2.79	8.78	4.71	26.45	3.11
157	IG25_AR2	ActiveIntergenicRegion	0	16.71	1.55	3.89	0.96	23.49	4.42