Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	AFTPH	Gene	0	72.36	28.44	45.93	20.02	213.50	96.76
2	422803	Transcript	0	0	0	0	0	0	0
3	238855	Transcript	0	0	0	0	0	0	0
4	238856	Transcript	0	18.97	18.69	4.24	4.51	108.04	111.17
5	498706	Transcript	1	12.58	2.42	20.42	8.07	34.72	3.60
6	409933	Transcript	0	0	0	0	0	0	0
7	409183	Transcript	0	0	0	0	0	0	0
8	487769	Transcript	0	1.30	9.48	0.00	0.00	4.49	10.07
9	ER1a	ExonRegion	0	4.25	0.80	5.86	3.94	0.70	0.00
10	E1_Ab	KnownBoundary	0	2.83	0.00	9.34	2.83	0.00	0.00
11	ER1b	ExonRegion	0	3.23	0.07	13.52	7.96	0.21	0.00
12	E1a_E2a	KnownJunction	0	6.33	3.32	46.85	20.06	0.00	0.00
13	I1_AR2	ActiveIntronRegion	0	0.87	0.00	9.85	2.95	1.01	0.78
14	I1_AR3	ActiveIntronRegion	0	0.00	0.00	23.05	6.46	0.00	5.55
15	ER2a	ExonRegion	0	8.45	3.90	36.14	17.69	1.81	0.00
16	E2_Ab	KnownBoundary	0	10.18	6.47	34.10	13.54	5.16	0.00
17	ER2b	ExonRegion	0	14.42	12.08	53.61	29.04	7.45	5.13
18	E2_Ac	KnownBoundary	1	16.15	17.10	69.56	9.73	37.71	18.22
19	ER2c	ExonRegion	0	21.36	12.68	31.18	10.66	25.96	11.76
20	E2_Ad	KnownBoundary	1	19.64	12.82	45.03	23.54	144.16	30.06
21	ER2d	ExonRegion	0	36.92	25.87	73.01	37.90	103.11	30.01
22	E2a_E3a	KnownJunction	0	68.99	24.69	39.68	21.91	169.13	49.70
23	E2a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
24	I2_AR1	ActiveIntronRegion	0	0.00	0.54	1.70	2.25	153.41	71.05
25	I2_AR6	ActiveIntronRegion	0	1.31	1.56	5.29	5.29	2.15	4.29
26	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	9.08	11.65	3.95
27	ER3a	ExonRegion	0	92.27	49.67	99.02	41.55	137.10	51.41
28	E3_Da	NovelBoundary	0	0.00	2.76	3.02	11.47	13.65	9.32
29	E3a_E4a	KnownJunction	0	146.54	51.30	83.23	56.06	296.98	91.09
30	ER4a	ExonRegion	0	107.33	52.12	93.08	37.59	222.92	85.26
31	E4a_E5a	KnownJunction	0	138.41	92.19	87.15	22.29	389.54	220.39
32	ER5a	ExonRegion	0	124.12	72.75	70.05	34.20	294.29	158.49
33	E5a_E6a	KnownJunction	0	129.37	47.25	58.12	30.29	825.78	369.16
34	I5_AR1	ActiveIntronRegion	0	10.70	2.82	10.49	5.35	33.36	9.82
35	E6_Aa	NovelBoundary	0	18.92	2.76	17.99	7.72	76.49	13.10
36	ER6a	ExonRegion	0	135.49	65.25	73.97	30.26	382.40	170.28
37	E6a_E7a	KnownJunction	0	158.84	40.61	45.60	31.37	612.45	273.36
38	E6a_E8a	KnownJunction	0	2.59	18.95	0.00	0.00	8.99	20.15
39	I6_AR1	ActiveIntronRegion	0	2.82	0.92	6.26	4.77	45.76	39.78
40	ER7a	ExonRegion	0	116.50	43.22	51.14	20.66	354.28	147.70
41	E7_Da	KnownBoundary	0	5.66	0.00	13.15	6.47	4.66	0.00
42	E7a_E7b	KnownJunction	1	78.45	13.05	35.01	6.36	475.61	54.74
43	E7a_E8a	KnownJunction	0	33.98	33.75	8.48	9.03	197.10	214.01
44	ER7b	ExonRegion	0	12.58	2.42	20.42	8.07	34.72	3.60
45	E7_Ab	KnownBoundary	1	34.10	9.51	12.92	15.82	142.42	20.82
46	ER7c	ExonRegion	1	136.83	21.50	58.19	14.20	315.94	52.01
47	E7_Db	NovelBoundary	0	2.59	0.00	10.08	8.26	0.00	0.00
48	E7b_E8a	KnownJunction	1	204.81	30.99	58.86	5.82	735.05	137.94
49	I7_SR3	SilentIntronRegion	0	0.00	0.00	3.13	3.94	50.76	12.35
50	I7_AR4	ActiveIntronRegion	0	1.76	0.00	2.22	1.03	57.70	31.14
51	I7_AR5	ActiveIntronRegion	0	17.67	3.11	5.39	3.69	53.99	20.43
52	ER8a	ExonRegion	0	236.54	108.45	84.24	26.18	807.91	283.52
53	E8a_E9a	KnownJunction	0	232.41	100.96	64.61	28.60	1580.97	639.24
54	E8a_E9b	KnownJunction	0	139.49	33.35	12.35	17.51	656.56	226.68
55	E9_Aa	NovelBoundary	0	6.51	9.67	0.00	0.00	78.07	33.58
56	E9_Ab	NovelBoundary	0	6.57	6.86	0.00	0.00	45.11	61.62
57	ER9a	ExonRegion	0	232.77	105.44	55.94	35.01	903.55	368.39
58	ER9b	ExonRegion	0	383.21	183.07	86.47	31.11	735.83	538.92
59	E9_Da	KnownBoundary	1	436.92	172.45	97.74	20.44	1203.25	694.82
60	ER9c	ExonRegion	0	254.25	118.59	77.29	17.83	841.41	484.56
61	E9_Db	KnownBoundary	0	18.86	15.75	9.85	5.82	19.23	18.13
62	E9_Dc	KnownBoundary	1	299.83	105.01	68.03	13.59	29.55	69.35
63	ER9d	ExonRegion	0	82.34	40.51	36.93	8.62	36.16	37.02
64	ER9e	ExonRegion	0	196.57	52.03	48.55	19.16	743.50	346.53
65	ER9f	ExonRegion	0	3.96	3.64	0.00	0.00	18.98	8.33