Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	HTRA2	Gene	0	30.51	24.49	4.63	2.08	27.64	9.53
2	258080	Transcript	0	0.06	0.92	0.00	0.00	0.37	0.00
3	462909	Transcript	0	0.00	2.70	0.00	0.00	0.00	0.00
4	467961	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
5	484881	Transcript	0	2.53	0.00	0.00	0.00	0.00	0.00
6	352222	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
7	437202	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
8	484352	Transcript	0	0	0	0	0	0	0
9	465521	Transcript	1	6.90	0.99	2.68	3.52	14.66	0.39
10	482205	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
11	482331	Transcript	0	4.14	2.83	1.28	2.41	3.44	5.14
12	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
13	E1_Ab	KnownBoundary	0	6.27	0.00	0.00	0.00	0.00	0.00
14	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
15	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
16	ER1c	ExonRegion	0	0.00	0.04	0.00	0.00	0.00	0.00
17	E1_Ad	KnownBoundary	0	0.00	3.26	0.00	0.00	0.00	0.00
18	ER1d	ExonRegion	0	0.00	5.63	0.00	0.00	0.00	0.00
19	E1_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
20	E1a_E1i	KnownJunction	0	0.00	2.70	0.00	0.00	0.00	0.00
21	E1a_E1j	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
22	E1a_E2c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
23	ER1e	ExonRegion	0	0.19	2.77	0.00	0.00	0.00	0.00
24	E1_Ae	KnownBoundary	0	0.00	9.79	5.24	0.00	0.00	0.00
25	ER1f	ExonRegion	0	2.71	12.91	0.00	0.00	0.77	0.00
26	E1_Af	KnownBoundary	0	5.48	17.44	0.00	0.00	8.66	3.44
27	ER1g	ExonRegion	0	3.12	10.52	0.79	1.33	0.76	0.00
28	E1_Ag	KnownBoundary	0	2.77	9.06	3.53	0.00	0.00	0.00
29	ER1h	ExonRegion	0	6.69	9.96	0.90	0.64	3.06	1.64
30	E1_Ah	KnownBoundary	0	13.98	3.49	0.00	0.00	0.00	0.00
31	E1_Ai	KnownBoundary	0	3.74	6.97	0.00	0.00	0.00	0.00
32	ER1i	ExonRegion	0	19.78	18.15	2.17	0.00	3.52	0.97
33	E1_Aj	KnownBoundary	0	26.81	31.16	3.53	0.00	16.73	4.70
34	ER1j	ExonRegion	0	25.73	27.01	2.17	0.00	5.88	1.85
35	ER1k	ExonRegion	0	30.92	21.63	1.75	0.00	16.34	5.88
36	E1b_E2c	KnownJunction	1	37.36	3.49	0.00	0.00	37.12	14.27
37	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
38	ER2b	ExonRegion	0	5.28	2.08	0.00	0.00	3.92	0.93
39	ER2c	ExonRegion	0	51.74	33.63	7.59	4.63	44.38	14.95
40	E2a_E3a	KnownJunction	0	72.43	93.82	11.67	8.97	66.26	32.74
41	E2a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
42	ER3a	ExonRegion	0	95.40	76.45	17.44	8.99	72.51	30.66
43	E3_Da	KnownBoundary	0	16.15	0.00	0.00	3.37	14.82	0.00
44	E3a_E3b	KnownJunction	0	121.66	78.80	15.83	0.00	89.15	51.63
45	ER3b	ExonRegion	0	7.74	0.12	5.34	1.81	7.92	0.00
46	E3_Db	KnownBoundary	0	6.75	0.00	12.24	0.00	17.56	0.00
47	ER3c	ExonRegion	1	6.90	0.99	2.68	3.52	14.66	0.39
48	E3_Ab	NovelBoundary	0	0.00	6.97	3.53	0.00	18.23	0.00
49	ER3d	ExonRegion	0	132.31	92.71	17.65	0.00	88.06	38.88
50	E3_Dd	KnownBoundary	0	14.22	0.00	3.53	0.00	5.16	0.00
51	E3d_E3c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
52	E3d_E3d	KnownJunction	0	120.27	106.64	19.75	0.00	192.11	73.55
53	ER3e	ExonRegion	0	127.47	90.89	19.55	0.00	104.64	44.89
54	ER3f	ExonRegion	1	11.24	3.48	0.92	0.00	14.92	0.00
55	E3_De	KnownBoundary	1	0.00	8.44	0.00	0.00	38.79	0.00
56	E3e_E3d	KnownJunction	0	5.06	0.00	0.00	0.00	0.00	0.00
57	ER3g	ExonRegion	1	10.75	6.23	3.11	4.20	15.59	0.90
58	E3_Ac	KnownBoundary	0	9.82	6.75	0.00	0.00	20.56	0.00
59	E3_Ad	KnownBoundary	0	13.86	15.69	0.00	3.04	17.65	0.00
60	ER3h	ExonRegion	0	17.03	13.92	0.58	1.87	16.69	1.91
61	ER3i	ExonRegion	0	124.93	97.92	13.74	4.31	104.38	35.90
62	E3_Df	KnownBoundary	0	7.47	0.00	3.24	2.61	12.57	3.53
63	E3f_E3e	KnownJunction	0	176.73	125.15	2.73	4.68	139.00	71.03
64	ER3j	ExonRegion	0	4.14	2.83	1.28	2.41	3.44	5.14
65	E3_Ae	KnownBoundary	0	2.59	10.29	3.53	0.00	3.91	12.93
66	ER3k	ExonRegion	0	172.41	104.69	14.00	6.46	109.22	47.80
67	E3_Dg	NovelBoundary	0	94.36	37.12	9.91	0.00	103.30	40.47
68	E3_Dh	NovelBoundary	0	0.00	0.00	0.00	0.00	4.83	13.35
69	E3h_E4a	KnownJunction	0	212.10	120.20	29.60	0.00	299.48	100.66
70	E3h_E5a	KnownJunction	0	7.05	21.43	0.00	0.00	52.85	15.95
71	ER3l	ExonRegion	0	178.81	108.67	21.73	4.47	155.35	51.98
72	I3	Intron	0	1.45	1.90	0.50	2.47	4.14	9.75
73	I3_SR1	SilentIntronRegion	0	2.21	2.17	0.76	2.91	3.69	10.27
74	I3_AR1	ActiveIntronRegion	0	0.00	1.41	0.00	1.65	5.07	8.91
75	ER4a	ExonRegion	0	109.24	106.39	17.74	1.77	117.78	41.75
76	E4_Da	NovelBoundary	0	3.74	9.56	3.47	0.00	0.00	9.99
77	E4a_E5a	KnownJunction	0	124.55	133.08	22.43	0.00	213.83	67.58
78	E5_Aa	NovelBoundary	0	6.03	6.97	0.00	7.94	9.66	11.92
79	ER5a	ExonRegion	0	38.59	35.04	5.53	1.49	52.99	15.48
80	E5_Da	KnownBoundary	0	7.23	20.53	3.36	0.00	39.79	45.92
81	ER5b	ExonRegion	0	0.00	0.00	1.14	0.00	1.58	0.74
82	E5_Db	KnownBoundary	0	0.00	6.07	3.53	2.77	65.67	70.02
83	ER5c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.85
84	E5_Dc	KnownBoundary	0	2.83	0.00	0.00	0.00	0.00	3.53
85	ER5d	ExonRegion	0	0.00	0.00	0.00	0.00	1.36	0.30
86	ER5e	ExonRegion	0	0.00	0.00	0.00	0.00	1.81	0.00
87	ER5f	ExonRegion	0	0.00	0.00	0.00	0.00	1.11	0.00