Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	CTNNA2	Gene	0	129.56	28.26	93.43	29.57	280.53	60.37
2	466387	Transcript	0	16.81	2.28	30.50	6.67	3.08	1.13
3	496251	Transcript	0	0.07	0.00	3.15	0.00	0.00	0.00
4	467488	Transcript	0	1.02	0.00	5.58	1.15	0.00	0.16
5	497804	Transcript	0	3.02	0.00	6.22	0.97	3.83	0.23
6	496558	Transcript	0	12.23	10.74	70.54	27.46	7.70	0.00
7	451966	Transcript	0	0.75	0.00	5.20	8.74	0.00	0.00
8	409971	Transcript	0	0.35	0.00	1.09	0.36	0.00	0.00
9	409266	Transcript	0	1.25	0.00	3.27	0.00	0.43	1.61
10	402739	Transcript	0	6.19	3.11	9.93	4.63	10.10	1.01
11	361291	Transcript	0	0	0	0	0	0	0
12	493024	Transcript	0	6.70	0.76	3.83	1.60	6.96	1.33
13	343114	Transcript	0	0.58	0.57	2.40	0.00	0.00	0.00
14	409550	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
15	465616	Transcript	0	0.84	0.00	0.87	0.00	0.00	0.00
16	467892	Transcript	0	0.94	0.00	11.19	1.41	0.00	0.00
17	ER1a	ExonRegion	0	9.15	0.50	13.28	2.72	1.31	0.21
18	E1a_E2a	KnownJunction	1	72.73	3.21	75.08	3.10	8.91	7.98
19	E1a_E5a	NovelJunction	1	3.43	6.41	24.42	0.00	5.16	0.00
20	ER2a	ExonRegion	1	29.52	1.80	28.41	6.48	4.73	1.98
21	E2a_E5a	KnownJunction	1	11.21	6.97	22.03	0.00	0.00	0.00
22	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
23	E3a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
24	ER4a	ExonRegion	0	1.05	0.00	1.09	0.00	0.00	0.47
25	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
26	ER5a	ExonRegion	0	20.06	8.31	19.55	2.15	0.00	1.85
27	ER5b	ExonRegion	0	25.78	5.31	41.50	6.91	8.24	0.02
28	E5a_E6a	KnownJunction	0	0.00	0.00	5.81	2.28	0.00	0.00
29	E5a_E7a	KnownJunction	0	3.74	0.00	13.83	0.00	4.74	0.00
30	E5a_E8a	NovelJunction	0	23.14	0.00	2.90	7.88	9.32	4.95
31	E5a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	4.74	0.00
32	E5a_E11a	NovelJunction	0	0.00	0.00	8.94	0.00	0.00	0.00
33	E6a_E6b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
34	ER6a	ExonRegion	0	0.16	0.00	12.53	2.32	0.00	0.00
35	ER6b	ExonRegion	0	2.01	0.00	15.64	3.46	0.00	0.00
36	E6_Ab	KnownBoundary	0	0.00	0.00	2.56	6.52	0.00	0.00
37	ER6c	ExonRegion	0	7.50	0.00	16.05	4.31	0.00	0.00
38	E6c_E8a	KnownJunction	0	0.00	0.00	6.15	0.00	0.00	0.00
39	ER6d	ExonRegion	0	0.35	0.00	9.60	0.00	0.00	0.00
40	ER7a	ExonRegion	0	3.05	0.00	7.91	1.44	1.76	0.00
41	E7a_E8a	KnownJunction	0	0.00	0.00	3.13	2.45	0.00	0.00
42	ER8a	ExonRegion	0	27.40	6.69	53.52	13.52	16.77	1.06
43	E8a_E9a	KnownJunction	0	28.20	20.70	36.49	11.85	26.64	10.41
44	ER9a	ExonRegion	1	39.59	2.56	33.91	7.84	40.86	7.87
45	E9_Da	NovelBoundary	1	65.02	0.00	9.39	0.00	98.63	10.07
46	ER9b	ExonRegion	0	5.28	0.00	0.00	0.00	8.81	0.93
47	I9_AR2	ActiveIntronRegion	0	5.56	1.70	24.01	4.92	1.90	0.00
48	ER10a	ExonRegion	0	7.07	0.00	37.11	10.18	4.79	0.00
49	E10a_E11a	KnownJunction	0	0.00	0.00	31.31	17.89	0.00	0.00
50	ER11a	ExonRegion	0	8.09	1.03	32.12	8.02	3.20	0.00
51	E11a_E17a	KnownJunction	0	13.56	6.97	35.18	11.64	0.00	0.00
52	ER12a	ExonRegion	0	2.47	0.00	5.71	0.00	0.00	0.00
53	E12_Ab	KnownBoundary	0	3.62	9.84	26.47	6.63	0.00	0.00
54	ER12b	ExonRegion	0	9.68	9.80	37.55	16.39	2.61	0.00
55	E12a_E15a	KnownJunction	0	0.00	0.00	6.03	5.33	0.00	0.00
56	E12a_E17a	KnownJunction	0	21.99	21.49	135.37	54.92	15.40	0.00
57	E13_Aa	NovelBoundary	0	2.71	0.00	30.74	12.29	0.00	0.00
58	ER13a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
59	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
60	E13a_E17a	NovelJunction	0	0.00	0.00	0.00	5.98	0.00	0.00
61	ER14a	ExonRegion	0	1.41	0.00	4.35	1.44	0.00	0.00
62	E14a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
63	ER15a	ExonRegion	0	2.24	0.01	2.61	7.40	0.00	0.00
64	E15a_E17a	KnownJunction	0	0.00	0.00	6.94	13.48	0.00	0.00
65	ER16a	ExonRegion	0	5.01	0.00	2.08	0.00	1.73	0.00
66	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
67	ER17a	ExonRegion	0	31.67	28.05	193.72	69.65	5.42	0.00
68	ER17b	ExonRegion	0	30.65	19.09	129.79	55.31	4.64	0.79
69	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	5.21
70	E17a_E19a	KnownJunction	0	32.78	26.04	181.31	45.62	14.07	0.00
71	ER18a	ExonRegion	0	0.00	0.00	10.99	0.00	0.00	1.22
72	ER19a	ExonRegion	0	39.09	35.75	202.45	81.59	18.14	1.77
73	E19_Da	KnownBoundary	0	62.73	33.07	133.95	96.84	72.41	8.98
74	ER19b	ExonRegion	0	41.50	27.03	125.04	69.52	14.30	3.09
75	E19b_E20a	KnownJunction	0	52.06	26.94	177.78	85.69	23.06	18.81
76	ER20a	ExonRegion	0	40.00	28.59	201.28	80.86	9.24	8.02
77	E20_Da	KnownBoundary	0	36.64	30.43	186.66	75.47	4.66	5.21
78	ER20b	ExonRegion	0	61.81	19.16	146.25	56.81	14.56	5.05
79	E20b_E21a	KnownJunction	0	102.80	21.37	279.90	126.63	42.70	26.45
80	ER21a	ExonRegion	0	66.45	32.43	198.59	101.91	21.12	9.32
81	E21a_E22a	KnownJunction	0	90.38	24.69	234.93	38.71	17.31	4.28
82	ER22a	ExonRegion	0	61.91	39.01	167.89	72.41	18.30	8.06
83	E22a_E23a	KnownJunction	0	33.44	31.05	64.38	26.43	45.70	25.69
84	ER23a	ExonRegion	0	30.53	16.57	54.14	26.09	18.21	11.66
85	E23a_E28a	KnownJunction	0	49.83	16.59	52.31	32.24	43.28	13.94
86	I23	Intron	0	8.84	2.38	22.66	6.51	11.84	4.06
87	I23_SR1	SilentIntronRegion	0	5.02	1.81	22.80	6.14	4.03	3.13
88	I23_SR2	SilentIntronRegion	0	2.03	0.50	23.96	5.60	1.16	0.45
89	I23_AR2	ActiveIntronRegion	0	7.66	2.41	18.74	4.78	10.00	2.20
90	I23_SR3	SilentIntronRegion	0	7.45	1.90	20.95	6.47	3.86	2.38
91	I23_AR3	ActiveIntronRegion	0	4.45	1.60	30.50	5.04	45.39	5.42
92	I23_AR4	ActiveIntronRegion	1	9.28	0.00	7.21	0.61	100.43	7.89
93	I23_SR4	SilentIntronRegion	0	29.28	7.83	21.64	6.96	112.25	22.01
94	I23_AR5	ActiveIntronRegion	0	106.75	16.72	41.62	16.74	4.06	0.18
95	I23_SR5	SilentIntronRegion	0	39.60	3.87	32.37	12.29	23.21	4.72
96	I23_AR6	ActiveIntronRegion	0	86.36	10.06	18.73	6.92	150.76	31.88
97	I23_AR7	ActiveIntronRegion	0	147.36	57.54	19.74	4.77	18.43	14.76
98	I23_SR7	SilentIntronRegion	0	3.01	0.92	22.23	6.28	3.87	3.40
99	I23_AR8	ActiveIntronRegion	0	3.42	0.99	25.51	4.90	1.07	1.33
100	I23_SR8	SilentIntronRegion	0	9.23	3.01	23.76	6.75	21.98	5.77
101	I23_AR9	ActiveIntronRegion	0	14.85	0.46	19.62	4.27	11.48	1.62
102	Ix	Intron	0	20.36	3.00	31.77	10.38	144.65	52.64
103	Ix_AR1	ActiveIntronRegion	0	10.40	4.54	16.63	8.37	20.88	0.00
104	Ix_SR1	SilentIntronRegion	0	21.92	1.04	42.57	14.15	222.91	46.96
105	Ix_AR2	ActiveIntronRegion	0	22.31	4.25	27.28	7.76	116.33	75.05
106	I23	Intron	0	6.37	1.69	21.30	6.84	11.08	4.75
107	I23_AR1	ActiveIntronRegion	0	4.55	0.00	24.95	12.37	29.62	31.16
108	I23_SR1	SilentIntronRegion	0	4.22	0.00	49.97	32.31	63.88	55.85
109	I23_AR2	ActiveIntronRegion	0	4.22	0.00	48.42	31.39	65.09	53.69
110	I23_SR2	SilentIntronRegion	0	5.70	1.42	23.55	7.66	3.75	4.16
111	I23_AR3	ActiveIntronRegion	0	3.68	0.00	24.37	12.61	5.39	9.46
112	I23_SR3	SilentIntronRegion	0	7.87	1.93	21.00	7.28	9.98	3.60
113	I23_AR5	ActiveIntronRegion	0	58.95	6.04	25.93	12.40	12.25	17.59
114	I23_AR6	ActiveIntronRegion	0	101.34	11.33	43.85	23.50	39.45	43.42
115	I23_AR7	ActiveIntronRegion	0	67.86	16.07	18.36	10.95	34.32	33.70
116	I23_AR8	ActiveIntronRegion	1	58.18	15.24	13.52	8.62	14.46	26.53
117	I23_AR9	ActiveIntronRegion	1	55.80	16.62	12.72	7.08	15.76	31.74
118	I23_AR10	ActiveIntronRegion	1	54.37	11.17	9.23	4.31	10.62	35.64
119	I23_SR4	SilentIntronRegion	0	9.55	2.37	19.79	5.44	17.64	5.42
120	I23_AR11	ActiveIntronRegion	0	0.00	0.80	19.66	3.50	0.37	0.00
121	I23_SR5	SilentIntronRegion	0	3.46	1.45	22.29	7.88	10.36	4.95
122	I23_AR12	ActiveIntronRegion	0	4.15	0.64	25.43	4.85	125.33	32.26
123	I23_AR13	ActiveIntronRegion	0	0.51	0.00	14.01	9.93	0.00	0.00
124	I23_AR3	ActiveIntronRegion	0	24.11	7.60	27.41	10.28	48.39	38.12
125	Ix	Intron	0	4.12	1.50	8.40	4.36	28.43	13.38
126	Ix_SR1	SilentIntronRegion	0	4.13	1.50	8.41	4.37	28.47	13.40
127	I23	Intron	0	12.09	9.61	2.39	0.47	20.70	15.49
128	I23_SR1	SilentIntronRegion	0	11.29	8.04	1.06	0.00	45.77	34.25
129	E24_Aa	NovelBoundary	0	31.27	29.92	12.98	0.00	0.00	0.00
130	ER24a	ExonRegion	0	9.66	1.52	4.30	0.91	4.10	2.66
131	E24a_E28a	KnownJunction	0	3.74	0.00	3.36	2.28	9.82	0.00
132	ER25a	ExonRegion	0	1.16	1.14	4.80	0.00	0.00	0.00
133	E25a_E28a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
134	ER26a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
135	E26_Da	NovelBoundary	0	7.47	0.00	16.00	15.22	0.00	0.00
136	E26a_E28a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
137	ER27a	ExonRegion	0	1.69	0.00	1.74	0.00	0.00	0.00
138	E27a_E28a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
139	ER28a	ExonRegion	0	65.92	35.47	105.19	46.89	45.53	11.91
140	E28a_E29a	KnownJunction	1	89.30	16.14	76.22	51.17	101.46	4.87
141	ER29a	ExonRegion	0	85.87	27.95	109.69	45.15	59.73	7.88
142	E29_Da	NovelBoundary	0	28.68	5.96	26.75	13.00	110.70	30.14
143	E29a_E30a	KnownJunction	0	78.45	18.50	70.08	45.08	13.07	0.00
144	I29_AR1	ActiveIntronRegion	0	43.55	5.60	15.69	5.44	201.33	113.77
145	I29_AR2	ActiveIntronRegion	0	9.53	2.47	6.19	0.97	187.24	55.13
146	I29_AR3	ActiveIntronRegion	0	0.00	1.49	18.98	8.40	0.00	0.00
147	ER30a	ExonRegion	0	58.55	13.52	78.61	36.25	5.44	0.04
148	E30a_E31a	KnownJunction	0	70.86	17.44	97.06	27.24	4.08	0.00
149	ER31a	ExonRegion	0	72.50	18.96	84.67	34.28	5.33	0.00
150	E31_Da	KnownBoundary	1	75.80	31.27	89.77	8.10	7.32	0.00
151	ER31b	ExonRegion	0	57.63	16.86	53.87	12.89	10.64	0.00
152	E31c_E32a	KnownJunction	0	75.08	18.34	42.69	24.03	26.30	0.00
153	ER31c	ExonRegion	0	61.70	20.54	43.45	23.46	14.46	1.03
154	ER32a	ExonRegion	0	67.68	27.82	80.93	38.12	9.99	1.85
155	E32_Da	KnownBoundary	0	77.07	38.47	122.50	49.59	9.99	5.21
156	ER32b	ExonRegion	0	71.06	22.27	84.24	34.10	16.35	1.25
157	E32b_E33a	KnownJunction	1	100.39	16.37	170.15	64.70	53.94	0.00
158	ER33a	ExonRegion	0	111.44	24.93	138.64	75.00	26.03	0.27
159	E33a_E34a	KnownJunction	1	159.38	11.87	248.99	81.89	77.58	4.45
160	E34_Aa	NovelBoundary	0	0.00	9.79	3.07	2.66	0.00	0.00
161	ER34a	ExonRegion	0	158.00	38.40	157.83	67.71	43.09	1.02
162	E34_Da	NovelBoundary	0	0.00	10.74	10.53	6.31	0.00	0.00
163	E34a_E35a	KnownJunction	1	166.49	30.99	117.49	57.69	91.98	0.00
164	ER35a	ExonRegion	0	139.93	37.28	119.91	41.23	52.48	3.14
165	E35_Ab	KnownBoundary	0	145.40	41.68	133.32	29.85	112.95	9.15
166	ER35b	ExonRegion	0	173.62	55.60	138.89	26.19	67.94	8.93
167	E35a_E36a	KnownJunction	1	220.54	78.74	81.00	28.17	131.93	14.19
168	ER36a	ExonRegion	0	209.42	57.47	130.90	42.76	110.92	15.44
169	E36a_E37a	KnownJunction	1	249.46	112.49	126.26	31.86	292.41	27.37
170	E36a_E39a	NovelJunction	0	8.50	3.21	30.80	3.21	29.13	0.00
171	ER37a	ExonRegion	1	264.14	58.13	307.95	83.38	136.60	10.01
172	E37_Da	KnownBoundary	0	0.00	0.00	4.95	3.37	0.00	0.00
173	E37a_E38a	KnownJunction	0	6.45	0.00	5.12	5.87	12.24	0.00
174	E37a_E39a	KnownJunction	1	270.01	83.64	566.75	177.31	422.75	34.17
175	ER37b	ExonRegion	0	0.94	0.00	11.19	1.41	0.00	0.00
176	ER38a	ExonRegion	0	5.21	6.23	11.18	3.17	9.40	3.02
177	E38a_E39a	KnownJunction	0	6.93	3.09	13.49	4.84	8.66	0.00
178	E39_Aa	NovelBoundary	0	32.60	0.00	58.23	17.73	14.48	0.00
179	ER39a	ExonRegion	0	240.80	63.53	323.46	85.67	264.73	40.69
180	E39_Da	KnownBoundary	1	271.69	55.18	126.66	30.61	607.20	78.16
181	ER39b	ExonRegion	0	723.51	119.43	233.03	49.38	1912.56	401.79
182	E39_Db	KnownBoundary	0	332.37	70.76	31.82	2.56	1758.35	698.43
183	ER39c	ExonRegion	0	262.65	62.03	11.03	3.73	3239.13	889.86
184	ER39d	ExonRegion	0	2.11	0.00	0.00	0.00	9.04	1.85
185	IG47_SR1	SilentIntergenicRegion	0	7.51	2.07	9.59	1.41	3.78	0.66
186	IG47_AR2	ActiveIntergenicRegion	0	9.13	1.10	19.30	3.44	10.29	1.08
187	IG47_AR3	ActiveIntergenicRegion	0	8.66	2.66	8.95	2.41	18.55	0.00
188	IG47_SR2	SilentIntergenicRegion	0	3.99	1.34	3.18	0.81	18.51	2.46
189	IG47_AR4	ActiveIntergenicRegion	0	1.14	0.56	4.66	0.00	9.52	0.00