Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	NRXN1	Gene	0	78.07	16.75	130.35	50.59	199.40	58.59
2	405581	Transcript	0	8.47	2.38	36.29	14.03	18.20	11.49
3	406316	Transcript	0	0	0	0	0	0	0
4	404971	Transcript	0	1.04	0.00	3.50	1.10	0.46	0.44
5	401669	Transcript	0	0	0	0	0	0	0
6	405472	Transcript	0	0	0	0	0	0	0
7	496792	Transcript	0	0	0	0	0	0	0
8	331040	Transcript	0	1.84	1.24	8.41	3.69	0.74	0.24
9	402717	Transcript	0	0	0	0	0	0	0
10	406859	Transcript	0	0	0	0	0	0	0
11	495871	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
12	474354	Transcript	0	0.59	0.04	21.40	3.51	6.71	5.31
13	462791	Transcript	0	6.28	3.31	28.69	9.02	0.45	0.00
14	401710	Transcript	0	0.34	0.00	8.11	5.51	0.00	0.00
15	342183	Transcript	0	125.11	17.04	78.08	17.97	280.37	48.54
16	378262	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
17	412315	Transcript	0	0.50	0.00	0.86	0.00	0.14	0.00
18	484192	Transcript	0	19.34	20.98	118.92	25.94	293.16	53.56
19	ER1a	ExonRegion	0	6.17	4.00	12.28	3.39	0.00	0.00
20	E1_Ab	KnownBoundary	0	12.89	19.80	8.25	6.20	0.00	0.00
21	ER1b	ExonRegion	0	9.99	7.19	17.77	5.78	1.23	1.18
22	E1_Ac	KnownBoundary	0	8.98	5.06	12.47	5.17	5.16	0.00
23	ER1c	ExonRegion	0	6.30	3.57	23.90	3.64	3.67	0.67
24	E1_Ad	KnownBoundary	1	10.61	11.47	57.27	8.54	7.32	3.61
25	ER1d	ExonRegion	0	7.11	14.91	79.57	23.27	22.66	12.59
26	E1a_E2a	KnownJunction	0	19.16	13.27	105.26	48.34	108.46	68.17
27	ER2a	ExonRegion	0	19.38	16.71	114.33	44.24	101.64	150.47
28	E2_Ab	KnownBoundary	0	3.68	0.00	26.53	11.26	4.33	8.73
29	ER2b	ExonRegion	1	11.10	7.49	45.27	15.27	6.07	36.90
30	E2a_E3a	KnownJunction	0	0.00	0.00	6.72	0.00	0.00	0.00
31	E2a_E4a	KnownJunction	1	9.10	25.65	48.67	28.17	17.90	132.74
32	E2a_E9b	NovelJunction	0	7.29	0.00	20.27	6.31	0.00	0.00
33	ER3a	ExonRegion	0	3.11	0.00	3.77	3.31	1.39	1.33
34	E3_Da	NovelBoundary	0	0.00	5.74	31.48	2.99	0.00	0.00
35	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
36	I3_AR2	ActiveIntronRegion	0	25.27	4.35	20.07	9.69	68.62	14.40
37	I3_AR4	ActiveIntronRegion	0	2.21	2.51	25.04	12.30	27.28	15.00
38	I3_SR5	SilentIntronRegion	0	2.52	1.59	22.30	13.10	34.46	20.93
39	I3_AR5	ActiveIntronRegion	0	4.10	2.66	39.45	14.37	106.46	139.58
40	I3_AR13	ActiveIntronRegion	0	0.00	1.22	31.35	8.13	0.83	0.00
41	I3_AR15	ActiveIntronRegion	0	14.32	4.50	11.05	4.63	515.03	146.91
42	ER4a	ExonRegion	1	9.97	13.85	38.26	29.92	7.33	45.97
43	E5a_E6b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
44	ER5a	ExonRegion	1	9.85	4.64	44.10	18.10	7.83	34.56
45	E6a_E9b	KnownJunction	0	9.64	5.46	39.56	18.00	13.07	0.00
46	E6b_E9b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
47	ER6a	ExonRegion	0	10.56	4.16	40.19	15.08	5.42	8.33
48	ER6b	ExonRegion	0	17.10	7.89	55.40	18.10	7.59	3.33
49	ER6c	ExonRegion	0	0.00	0.00	2.17	2.15	0.00	0.00
50	I6	Intron	0	0.28	1.56	29.61	9.31	0.88	2.69
51	I6_SR1	SilentIntronRegion	0	0.37	1.80	32.77	9.34	0.73	0.53
52	E7_Aa	NovelBoundary	1	0.00	0.00	25.16	8.32	9.99	53.56
53	ER7a	ExonRegion	0	8.47	2.38	36.29	14.03	18.20	11.49
54	E7_Da	NovelBoundary	0	3.68	0.00	20.78	17.18	0.00	0.00
55	I7	Intron	0	3.12	1.06	28.96	10.33	7.27	4.42
56	I7_AR1	ActiveIntronRegion	0	7.52	2.52	43.91	11.41	0.00	0.00
57	I7_SR2	SilentIntronRegion	0	4.40	2.04	26.97	10.21	15.86	16.44
58	I7_AR2	ActiveIntronRegion	0	1.09	4.17	47.41	14.85	12.93	9.60
59	I7_SR3	SilentIntronRegion	0	1.42	0.67	28.48	9.80	4.25	3.52
60	I7_AR3	ActiveIntronRegion	0	7.15	0.62	34.68	9.15	4.75	7.20
61	I7_SR4	SilentIntronRegion	0	19.11	1.61	23.71	6.50	23.57	5.46
62	I7_AR4	ActiveIntronRegion	0	7.51	1.78	35.54	8.27	0.00	0.00
63	I7_SR5	SilentIntronRegion	0	8.74	2.15	32.74	14.37	31.19	5.35
64	I7_SR6	SilentIntronRegion	0	2.05	1.28	29.50	11.28	9.57	4.61
65	I7_SR7	SilentIntronRegion	0	1.43	0.32	33.41	13.46	1.41	1.64
66	I7_AR7	ActiveIntronRegion	0	1.28	0.00	64.17	20.98	0.00	0.00
67	I7_SR8	SilentIntronRegion	0	2.52	1.25	30.37	11.06	0.48	0.23
68	I7_SR1	SilentIntronRegion	0	1.48	0.45	27.55	9.32	4.95	6.13
69	I7_AR1	ActiveIntronRegion	0	7.64	1.05	46.74	16.46	0.00	0.00
70	I7_SR2	SilentIntronRegion	0	14.15	0.00	93.20	34.90	0.36	0.00
71	I7_AR2	ActiveIntronRegion	0	20.31	3.38	91.20	34.77	1.74	1.57
72	I7_AR3	ActiveIntronRegion	0	13.15	9.06	51.87	22.06	92.43	52.16
73	I7_SR4	SilentIntronRegion	0	5.00	1.83	27.03	10.32	8.51	3.30
74	I7_AR4	ActiveIntronRegion	0	0.85	1.23	28.25	10.73	0.00	0.00
75	I7_SR5	SilentIntronRegion	0	4.05	4.83	60.13	33.58	0.00	0.00
76	I7_AR5	ActiveIntronRegion	0	2.16	0.50	23.98	11.53	2.01	0.00
77	I7_AR6	ActiveIntronRegion	0	2.51	0.00	10.84	5.63	47.23	36.49
78	I7_AR3	ActiveIntronRegion	1	0.00	0.00	26.20	0.00	0.00	0.00
79	I7_AR6	ActiveIntronRegion	0	2.03	0.47	15.55	12.08	0.00	0.00
80	I7_SR4	SilentIntronRegion	0	0.00	0.00	31.50	19.75	0.00	0.00
81	I7_AR7	ActiveIntronRegion	0	0.00	0.00	28.03	18.96	0.00	0.00
82	ER8a	ExonRegion	0	0.00	0.00	0.00	0.27	0.00	0.00
83	E8a_E9b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
84	I8_AR1	ActiveIntronRegion	0	17.07	8.29	5.67	4.52	86.18	46.14
85	I8_AR2	ActiveIntronRegion	1	2.94	0.00	2.70	0.71	0.58	25.60
86	I8_AR7	ActiveIntronRegion	0	3.88	0.00	11.53	11.31	2.87	0.00
87	ER9a	ExonRegion	0	9.50	4.16	33.67	10.77	3.62	0.00
88	ER9b	ExonRegion	0	15.05	12.93	127.76	44.85	6.77	3.43
89	E9a_E10a	KnownJunction	0	3.74	0.00	40.82	5.49	0.00	19.14
90	E9a_E11a	KnownJunction	0	0.00	0.00	69.22	26.21	0.00	5.21
91	E10_Aa	NovelBoundary	1	6.87	3.09	21.75	9.73	154.15	0.00
92	E10a_E11a	KnownJunction	0	7.05	3.49	76.22	15.44	0.00	0.00
93	ER10a	ExonRegion	0	8.89	2.08	66.08	15.80	1.66	7.40
94	E10_Db	NovelBoundary	1	0.00	6.52	54.88	5.65	103.54	5.21
95	E10b_E11a	KnownJunction	0	3.74	0.00	12.81	0.00	0.00	0.00
96	ER10b	ExonRegion	0	4.93	0.00	11.28	0.00	0.00	0.00
97	I10	Intron	0	9.54	0.71	19.63	6.06	82.59	14.05
98	I10_SR1	SilentIntronRegion	1	1.66	0.82	22.57	6.76	52.04	0.73
99	I10_AR1	ActiveIntronRegion	0	18.16	0.73	20.21	6.43	123.13	28.26
100	E11_Aa	NovelBoundary	0	88.64	17.44	79.01	32.79	29.30	0.00
101	ER11a	ExonRegion	0	25.43	9.87	163.71	58.38	4.82	6.84
102	E11_Ab	NovelBoundary	0	28.38	35.83	193.89	56.22	7.66	16.46
103	E11a_E12a	KnownJunction	0	17.53	17.77	101.84	50.51	0.00	0.00
104	ER11b	ExonRegion	0	15.48	19.11	130.06	51.49	1.69	4.57
105	I11_AR1	ActiveIntronRegion	0	2.72	0.00	38.88	10.77	11.85	1.85
106	I11_AR3	ActiveIntronRegion	0	1.53	0.29	12.79	3.97	40.36	21.98
107	I11_AR4	ActiveIntronRegion	0	2.28	1.38	32.33	9.05	0.00	0.00
108	I11_SR5	SilentIntronRegion	0	9.03	7.05	20.65	7.90	0.00	0.00
109	I11_AR6	ActiveIntronRegion	0	2.03	2.57	6.38	3.70	61.39	38.50
110	ER12a	ExonRegion	0	20.30	15.06	258.29	78.24	1.25	0.96
111	E12_Da	NovelBoundary	0	3.43	0.00	26.47	28.11	0.00	10.41
112	E12a_E13a	KnownJunction	0	6.75	2.47	239.83	56.44	0.00	0.00
113	E12a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
114	ER13a	ExonRegion	0	10.15	7.67	104.70	31.89	3.99	0.00
115	E13a_E14a	KnownJunction	0	16.21	18.39	145.90	51.93	4.49	0.00
116	ER14a	ExonRegion	0	16.73	19.48	154.34	70.96	5.49	0.00
117	E14_Da	NovelBoundary	0	9.40	0.00	85.05	20.93	0.00	0.00
118	E14a_E15b	KnownJunction	0	6.21	16.42	71.33	30.56	3.91	0.00
119	E14a_E16b	KnownJunction	0	12.89	8.66	44.23	23.49	5.16	0.00
120	I14	Intron	0	1.27	0.54	30.42	8.33	1.40	5.09
121	I14_SR1	SilentIntronRegion	0	1.27	0.54	30.46	8.34	1.40	5.10
122	ER15a	ExonRegion	0	0.59	0.04	21.40	3.51	6.71	5.31
123	E15_Da	NovelBoundary	0	2.47	0.00	72.98	12.83	31.46	36.52
124	E15a_E16b	KnownJunction	0	3.74	2.70	88.01	28.55	0.00	0.00
125	ER15b	ExonRegion	0	4.95	9.99	101.44	37.70	6.47	1.35
126	I15	Intron	0	9.37	1.49	33.10	9.14	6.53	4.66
127	I15_SR1	SilentIntronRegion	0	9.24	1.50	33.37	9.32	6.73	4.82
128	E16_Aa	NovelBoundary	1	34.10	3.15	47.48	5.44	0.00	0.00
129	ER16a	ExonRegion	0	6.28	3.31	28.69	9.02	0.45	0.00
130	E16_Ab	KnownBoundary	1	7.29	6.30	64.38	5.76	0.00	0.00
131	ER16b	ExonRegion	0	21.62	29.82	223.48	104.36	7.62	1.65
132	E16a_E17a	KnownJunction	0	25.43	50.00	227.99	111.14	22.56	13.52
133	ER17a	ExonRegion	0	25.16	37.34	223.41	108.13	7.58	6.32
134	E17_Da	KnownBoundary	0	11.03	12.26	173.34	79.00	0.00	4.62
135	E17_Db	KnownBoundary	0	18.56	19.57	157.00	46.82	4.74	5.21
136	ER17b	ExonRegion	0	26.92	27.01	250.65	115.79	4.97	3.70
137	ER17c	ExonRegion	0	23.62	13.53	253.98	129.19	14.93	2.85
138	E17_Dc	KnownBoundary	0	16.75	19.80	227.13	139.79	33.38	4.70
139	ER17d	ExonRegion	0	26.88	20.17	395.23	282.04	20.45	4.84
140	E17d_E18a	KnownJunction	1	26.99	54.73	674.68	624.96	105.21	5.21
141	E18_Ab	NovelBoundary	0	23.32	29.47	376.79	314.66	32.71	3.53
142	ER18a	ExonRegion	1	26.39	35.53	595.92	514.65	44.12	3.42
143	ER18b	ExonRegion	0	24.30	45.01	574.08	436.26	38.97	5.86
144	E18a_E19a	KnownJunction	0	28.20	32.90	358.92	124.41	114.78	22.84
145	ER19a	ExonRegion	1	17.46	39.87	329.77	167.15	35.10	9.79
146	E19a_E20a	KnownJunction	0	0.00	0.00	2.39	6.69	0.00	0.00
147	E19a_E21a	KnownJunction	0	18.44	27.11	202.20	81.40	76.58	14.27
148	E20a_E21a	KnownJunction	0	0.00	0.00	11.95	3.37	0.00	0.00
149	ER20a	ExonRegion	0	1.02	0.00	9.98	6.46	0.00	0.00
150	ER21a	ExonRegion	0	16.86	22.50	224.35	127.59	61.76	11.00
151	E21b_E23a	KnownJunction	1	12.59	5.68	146.58	51.00	125.10	4.95
152	ER21b	ExonRegion	1	16.89	20.78	249.84	103.40	88.59	11.11
153	I21_AR3	ActiveIntronRegion	0	18.10	2.23	18.00	5.12	46.44	23.24
154	I21_SR3	SilentIntronRegion	0	44.23	7.49	18.32	6.09	12.40	10.15
155	I21_AR6	ActiveIntronRegion	0	3.82	0.79	11.22	11.07	0.00	1.22
156	I21_AR8	ActiveIntronRegion	0	1.55	1.37	36.77	20.03	0.00	0.46
157	I21_AR9	ActiveIntronRegion	0	2.31	0.00	24.42	3.42	44.93	11.68
158	E22_Aa	NovelBoundary	0	42.12	21.37	41.16	11.53	0.00	0.00
159	ER22a	ExonRegion	0	12.29	5.05	23.80	6.58	1.19	0.29
160	E22a_E23a	KnownJunction	1	3.13	0.00	69.05	8.81	19.89	0.00
161	I22_AR3	ActiveIntronRegion	0	0.65	0.00	40.30	13.03	0.00	0.00
162	I22_AR6	ActiveIntronRegion	0	6.17	0.93	6.84	2.42	18.29	27.47
163	ER23a	ExonRegion	1	31.25	33.98	287.90	102.26	121.35	15.54
164	E23_Da	NovelBoundary	0	11.99	0.00	11.33	19.19	0.00	0.00
165	E23a_E24a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
166	E23a_E26a	KnownJunction	0	17.29	34.42	357.72	77.54	174.29	36.10
167	I23_SR1	SilentIntronRegion	0	25.44	5.17	26.71	10.34	13.80	18.28
168	I23_AR1	ActiveIntronRegion	0	23.49	4.24	8.03	1.68	20.50	9.24
169	E24_Aa	NovelBoundary	0	0.00	0.00	36.89	20.23	0.00	0.00
170	ER24a	ExonRegion	0	0.00	0.00	6.10	0.99	0.03	1.71
171	E24a_E25a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
172	E25_Aa	NovelBoundary	0	0.00	6.97	30.85	0.00	0.00	0.00
173	ER25a	ExonRegion	0	0.00	0.00	8.56	1.07	0.00	0.00
174	I25_AR4	ActiveIntronRegion	0	49.47	12.66	7.30	3.34	69.93	44.77
175	ER26a	ExonRegion	1	28.80	15.57	209.03	60.86	182.68	22.48
176	E26_Da	NovelBoundary	0	6.63	3.21	49.30	27.57	4.49	17.04
177	E26a_E27a	KnownJunction	0	10.67	0.00	42.69	17.51	46.11	21.83
178	E26a_E28a	KnownJunction	1	19.82	0.00	71.21	23.27	129.26	13.94
179	ER27a	ExonRegion	0	11.96	8.29	47.10	18.98	59.34	10.94
180	E27a_E28a	KnownJunction	1	13.50	0.00	69.90	24.47	169.38	12.43
181	ER28a	ExonRegion	0	45.31	16.80	331.59	95.02	247.70	37.63
182	E28a_E31a	KnownJunction	0	55.68	15.52	158.59	48.23	547.27	116.20
183	E29_Aa	NovelBoundary	0	3.74	8.21	2.73	0.00	4.16	0.00
184	ER29a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
185	E29_Da	NovelBoundary	0	7.47	6.97	9.91	0.00	0.00	0.00
186	E29a_E31a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
187	I29_SR2	SilentIntronRegion	0	20.38	2.31	25.97	6.36	88.12	17.51
188	I29_AR2	ActiveIntronRegion	0	41.51	7.20	20.92	8.64	173.48	73.13
189	ER30a	ExonRegion	0	0.50	0.00	0.86	0.00	0.14	0.00
190	E30_Ab	KnownBoundary	0	0.00	0.00	5.75	3.15	0.00	0.00
191	ER30b	ExonRegion	1	12.43	0.80	58.62	7.98	31.13	4.29
192	E30a_E31a	KnownJunction	0	6.45	0.00	25.62	5.17	69.42	13.94
193	I30_AR3	ActiveIntronRegion	1	12.53	2.14	2.44	1.32	81.66	8.61
194	ER31a	ExonRegion	0	70.07	20.59	246.90	57.21	334.07	73.18
195	E31a_E32a	KnownJunction	1	19.34	20.98	118.92	25.94	293.16	53.56
196	E31b_E32a	KnownJunction	1	35.37	3.49	101.04	18.54	343.10	58.52
197	ER31b	ExonRegion	1	27.68	6.23	124.56	19.15	180.40	35.38
198	ER32a	ExonRegion	0	187.67	26.56	314.31	82.89	1687.22	480.33
199	E32_Da	KnownBoundary	1	329.96	114.29	612.01	135.44	154.07	450.17
200	ER32b	ExonRegion	0	186.33	31.50	257.58	100.77	187.04	58.89
201	E32_Db	KnownBoundary	1	44.29	6.19	30.80	0.00	499.16	38.20
202	E32_Dc	KnownBoundary	1	58.03	3.15	15.31	5.00	81.57	22.50
203	ER32c	ExonRegion	1	95.01	6.23	56.49	15.08	320.02	22.21
204	ER32d	ExonRegion	0	359.91	46.08	141.39	38.51	820.02	145.35