Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	DPY30	Gene	0	64.74	26.77	12.31	7.03	170.47	92.24
2	342166	Transcript	0	89.34	49.67	15.71	7.22	457.94	328.11
3	295066	Transcript	0	8.70	2.59	1.59	0.58	19.33	1.05
4	422413	Transcript	0	0	0	0	0	0	0
5	416877	Transcript	0	0.00	0.00	0.00	0.00	1.36	0.00
6	414013	Transcript	0	0	0	0	0	0	0
7	430665	Transcript	0	0.11	0.36	0.00	0.00	0.00	0.00
8	452582	Transcript	0	3.42	11.28	0.00	0.00	15.93	8.46
9	446765	Transcript	0	0.00	0.00	0.00	0.35	0.00	0.00
10	ER1a	ExonRegion	0	2.11	0.00	0.00	0.00	0.00	0.00
11	E1_Ad	KnownBoundary	0	104.97	8.83	34.21	4.95	12.32	4.53
12	ER1b	ExonRegion	0	24.98	1.56	6.70	1.08	3.01	1.85
13	ER1c	ExonRegion	0	90.46	9.75	27.24	6.79	11.96	4.84
14	ER1d	ExonRegion	0	195.79	47.70	40.94	12.93	135.81	34.75
15	E1_Da	KnownBoundary	0	13.32	2.92	0.00	0.00	15.07	5.04
16	E1a_E2a	KnownJunction	0	346.53	104.45	44.06	16.69	672.04	173.96
17	ER1e	ExonRegion	0	250.65	69.85	45.83	14.77	234.95	69.64
18	ER1f	ExonRegion	0	4.69	2.82	0.00	1.17	5.20	2.10
19	E1b_E2a	KnownJunction	0	12.71	2.36	3.19	0.00	33.46	0.00
20	ER2a	ExonRegion	0	193.42	66.11	28.85	18.01	334.61	125.70
21	E2a_E3a	KnownJunction	0	143.23	63.39	12.92	28.76	565.58	213.00
22	ER3a	ExonRegion	0	175.46	72.37	36.07	30.16	304.57	119.40
23	E3a_E4a	KnownJunction	0	239.82	103.21	62.16	29.96	598.63	220.81
24	E3a_E6a	NovelJunction	0	9.46	0.00	0.00	0.00	0.00	0.00
25	I3_AR4	ActiveIntronRegion	0	12.21	12.68	3.53	3.45	36.41	7.54
26	ER4a	ExonRegion	0	365.82	111.71	70.66	41.02	589.89	269.13
27	E4_Da	NovelBoundary	0	7.35	3.09	7.06	12.23	0.00	0.00
28	E4a_E5a	KnownJunction	0	326.29	62.60	109.18	39.26	988.75	350.85
29	E4a_E6a	KnownJunction	0	18.80	22.16	2.62	5.87	30.05	17.21
30	E4a_E7a	KnownJunction	0	3.37	0.00	0.00	2.34	10.07	17.88
31	E5_Aa	NovelBoundary	0	16.99	14.40	34.72	26.86	30.13	23.59
32	ER5a	ExonRegion	0	290.07	109.19	64.64	34.25	847.12	325.09
33	E5_Da	KnownBoundary	0	361.72	114.23	173.68	52.96	2709.15	1009.07
34	ER5b	ExonRegion	0	176.57	99.34	31.42	14.43	915.88	656.21
35	E5_Db	NovelBoundary	0	18.20	3.49	2.56	2.83	155.82	75.39
36	E6_Aa	NovelBoundary	0	18.26	13.56	9.39	5.60	133.26	47.35
37	ER6a	ExonRegion	0	27.45	17.18	3.72	4.23	37.52	22.64
38	E6_Ab	KnownBoundary	0	45.79	12.66	9.17	5.49	120.28	84.12
39	ER6b	ExonRegion	0	28.56	12.85	4.02	1.51	38.22	32.10
40	E6_Da	NovelBoundary	0	0.00	9.62	0.00	0.00	8.24	8.65
41	E6a_E7a	KnownJunction	0	14.76	0.00	0.00	0.00	58.18	82.70
42	E6_Db	NovelBoundary	0	2.83	9.84	3.30	3.15	38.95	5.12
43	ER6c	ExonRegion	0	0.00	0.00	0.00	0.00	1.36	0.00
44	ER7a	ExonRegion	0	10.68	8.47	0.25	3.94	23.09	26.06
45	E7_Da	NovelBoundary	0	7.11	0.00	16.34	3.32	4.74	0.00
46	E7a_E8a	KnownJunction	0	3.19	3.21	0.00	0.00	0.00	0.00
47	E7a_E9a	KnownJunction	0	11.45	7.59	0.00	0.00	22.47	9.57
48	E7a_E10a	KnownJunction	0	0.00	0.00	0.00	3.37	0.00	0.00
49	E8_Aa	NovelBoundary	0	54.41	12.49	16.68	6.31	86.81	128.12
50	ER8a	ExonRegion	0	11.35	14.05	0.00	0.00	0.00	0.30
51	E8_Da	KnownBoundary	0	74.24	51.24	36.72	6.14	394.79	119.64
52	ER8b	ExonRegion	0	0.11	0.36	0.00	0.00	0.00	0.00
53	I8_SR2	SilentIntronRegion	0	14.54	7.12	4.72	2.25	14.97	27.15
54	I8_AR2	ActiveIntronRegion	0	21.36	17.78	6.20	6.71	6.10	37.93
55	E9_Aa	NovelBoundary	0	21.51	21.77	14.23	0.00	12.24	44.75
56	ER9a	ExonRegion	0	23.90	31.36	2.26	4.65	40.74	27.70
57	E9_Da	NovelBoundary	0	23.38	54.84	10.59	0.00	90.06	40.30
58	E9_Db	NovelBoundary	0	19.64	44.60	3.53	2.61	72.91	53.40
59	ER9b	ExonRegion	0	3.42	11.28	0.00	0.00	15.93	8.46
60	I9	Intron	0	13.43	33.03	3.11	9.59	12.93	4.42
61	I9_SR1	SilentIntronRegion	0	13.46	33.10	3.12	9.61	12.96	4.42
62	Ix_AR9	ActiveIntronRegion	0	2.85	0.98	10.41	4.64	0.00	1.74
63	ER10a	ExonRegion	0	0.00	0.00	0.00	0.84	0.00	0.00
64	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
65	ER11a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
66	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
67	ER12a	ExonRegion	0	0.00	0.00	0.00	1.45	0.00	0.00
68	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
69	ER13a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
70	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
71	ER14a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
72	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
73	Ix_SR6	SilentIntronRegion	0	0.32	0.94	9.85	6.83	0.00	0.00
74	Ix_AR5	ActiveIntronRegion	0	0.58	0.09	10.10	3.24	0.74	0.42
75	Ix_AR4	ActiveIntronRegion	0	0.00	0.00	18.30	9.66	1.81	0.00
76	Ix_AR2	ActiveIntronRegion	0	5.64	0.44	9.26	3.04	18.72	5.91
77	ER15a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
78	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
79	Ix_AR12	ActiveIntronRegion	0	0.93	0.30	9.07	5.31	0.00	0.00
80	Ix_AR11	ActiveIntronRegion	0	0.80	0.00	10.25	3.97	0.00	0.97
81	Ix_SR3	SilentIntronRegion	0	0.00	0.00	11.80	9.47	0.00	0.77
82	ER16a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
83	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
84	ER17a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00