Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	ATL2	Gene	0	9.48	3.55	20.56	6.70	11.58	6.07
2	332337	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
3	406122	Transcript	0	0	0	0	0	0	0
4	451483	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
5	416222	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
6	472097	Transcript	0	2.07	0.00	5.74	0.00	0.40	0.00
7	474535	Transcript	0	1.92	0.00	1.64	0.40	6.25	8.06
8	419554	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
9	405384	Transcript	0	0	0	0	0	0	0
10	456736	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
11	378954	Transcript	0	19.14	6.29	1.81	0.00	107.13	63.11
12	449130	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
13	443098	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
14	452935	Transcript	0	1.30	0.00	1.57	0.75	0.56	0.00
15	402054	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
16	486927	Transcript	0	0.00	2.69	0.00	0.00	0.00	0.00
17	489896	Transcript	0	1.31	0.02	2.50	1.10	1.84	0.38
18	477642	Transcript	0	3.23	0.74	8.08	4.68	0.65	0.00
19	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
20	E1_Ag	KnownBoundary	1	0.00	0.00	20.55	0.00	0.00	3.61
21	ER1b	ExonRegion	0	0.00	0.00	5.79	0.00	0.00	0.00
22	ER1c	ExonRegion	0	0.00	0.00	8.69	0.00	0.00	0.00
23	ER1d	ExonRegion	1	0.00	0.00	15.60	0.00	0.00	1.85
24	ER1e	ExonRegion	1	0.00	0.00	30.42	2.15	0.00	1.85
25	ER1f	ExonRegion	1	3.38	0.00	33.89	2.15	0.00	1.85
26	ER1g	ExonRegion	0	4.88	3.95	32.03	4.71	0.00	3.10
27	E1a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
28	E1a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
29	E1a_E6a	KnownJunction	0	3.74	2.47	3.07	3.04	4.25	4.45
30	E1a_E6b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
31	E1a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
32	E1a_E10b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
33	ER2a	ExonRegion	0	2.60	0.00	3.13	1.50	1.11	0.00
34	E2_Ab	KnownBoundary	0	0.00	0.00	6.09	3.26	0.00	0.00
35	ER2b	ExonRegion	0	0.00	0.00	3.00	0.92	2.44	0.00
36	E2_Da	NovelBoundary	0	0.00	0.00	11.44	2.34	18.64	0.00
37	E2a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
38	E2a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
39	ER3a	ExonRegion	0	0.00	5.38	0.00	0.00	0.00	0.00
40	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
41	E4_Aa	NovelBoundary	0	38.68	21.49	16.05	5.44	31.21	42.57
42	ER4a	ExonRegion	0	0.00	1.28	2.01	0.67	0.00	0.00
43	E4_Da	NovelBoundary	0	979.64	702.50	319.81	244.30	2411.83	1548.58
44	E4a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
45	ER5a	ExonRegion	0	0.10	0.00	0.00	1.47	0.00	0.00
46	E5_Da	NovelBoundary	0	154.86	281.34	58.29	24.79	95.80	232.31
47	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
48	E5a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
49	ER6a	ExonRegion	0	15.06	3.35	43.72	6.64	1.13	13.45
50	E6_Ab	KnownBoundary	1	30.43	8.04	104.52	16.64	4.41	58.10
51	ER6b	ExonRegion	0	13.28	4.81	40.19	13.45	0.32	12.90
52	E6_Da	NovelBoundary	0	10.54	6.86	6.26	9.52	0.00	0.00
53	E6_Db	NovelBoundary	0	0.00	0.00	3.36	6.20	0.00	24.85
54	E6_Dc	NovelBoundary	0	10.42	0.00	9.34	9.57	0.00	28.38
55	E6c_E7a	KnownJunction	0	19.46	4.72	31.20	2.39	0.00	0.00
56	E6c_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
57	ER6c	ExonRegion	0	10.56	6.23	17.38	4.31	0.00	1.85
58	ER6d	ExonRegion	0	14.37	6.23	23.98	4.31	0.00	0.43
59	I6_AR1	ActiveIntronRegion	0	8.84	3.36	6.73	2.34	2.72	0.93
60	I6_SR2	SilentIntronRegion	0	3.82	0.84	11.87	1.62	5.99	2.00
61	I6_AR8	ActiveIntronRegion	0	0.00	0.00	14.32	5.97	1.40	0.00
62	I6_AR9	ActiveIntronRegion	0	4.85	1.07	14.37	2.19	0.00	0.00
63	I6_AR11	ActiveIntronRegion	0	11.88	2.78	1.94	0.96	34.55	15.68
64	ER7a	ExonRegion	0	15.72	2.45	51.01	17.10	0.28	1.72
65	E7_Da	KnownBoundary	0	7.29	0.00	22.54	12.18	3.66	10.41
66	ER7b	ExonRegion	0	12.59	0.00	28.03	10.32	1.81	2.67
67	E7_Db	KnownBoundary	0	3.49	0.00	12.58	2.45	0.00	0.00
68	E7b_E8a	KnownJunction	0	16.33	0.00	23.23	9.13	0.00	0.00
69	ER7c	ExonRegion	0	2.07	0.00	5.74	0.00	0.40	0.00
70	E8_Aa	NovelBoundary	0	0.00	0.00	18.96	3.21	0.00	0.00
71	ER8a	ExonRegion	0	11.38	1.39	25.30	12.06	0.00	0.00
72	E8_Da	KnownBoundary	0	0.00	0.00	13.09	0.00	0.00	0.00
73	E8a_E9a	KnownJunction	0	6.45	0.00	25.90	11.36	0.00	0.00
74	ER8b	ExonRegion	0	3.84	0.00	3.28	0.79	12.49	16.12
75	E8_Db	NovelBoundary	0	242.47	162.72	86.53	51.33	351.67	1014.95
76	ER9a	ExonRegion	0	3.31	0.45	20.92	11.95	1.13	1.05
77	E9a_E10a	KnownJunction	0	6.51	0.00	20.95	15.12	5.16	4.95
78	E10_Ab	NovelBoundary	0	2.77	0.00	10.59	0.00	0.00	0.00
79	ER10a	ExonRegion	0	3.65	0.00	13.83	11.95	1.81	1.85
80	ER10b	ExonRegion	0	5.86	1.99	23.80	14.36	2.37	1.60
81	E10b_E11a	KnownJunction	0	9.94	3.49	32.56	16.26	4.83	0.00
82	ER10c	ExonRegion	0	8.45	2.08	26.07	12.93	1.81	1.85
83	ER11a	ExonRegion	0	18.41	0.71	40.88	7.83	3.73	2.45
84	E11_Da	NovelBoundary	0	3.74	0.00	14.12	0.00	0.00	0.00
85	E11a_E12a	KnownJunction	1	16.57	0.00	70.53	2.88	14.23	4.70
86	ER12a	ExonRegion	0	17.73	6.17	31.13	7.39	3.06	0.33
87	E12a_E13a	KnownJunction	1	35.97	5.62	82.54	6.04	13.23	0.00
88	ER13a	ExonRegion	1	26.28	7.95	45.48	6.55	7.99	0.00
89	E13_Da	KnownBoundary	0	22.84	2.87	18.10	10.06	5.16	0.00
90	ER13b	ExonRegion	0	15.47	2.08	19.85	6.05	4.00	0.28
91	E13b_E14b	KnownJunction	0	15.61	0.00	28.63	8.65	9.24	0.00
92	ER13c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
93	E14_Aa	NovelBoundary	0	3.07	0.00	2.73	6.20	19.39	5.12
94	ER14a	ExonRegion	0	1.31	0.02	2.50	1.10	1.84	0.38
95	E14_Ab	KnownBoundary	0	0.00	0.00	2.85	3.15	0.00	0.00
96	E14_Ac	KnownBoundary	0	16.33	0.00	22.03	5.11	12.74	9.15
97	ER14b	ExonRegion	0	21.11	0.62	34.54	12.93	7.59	3.70
98	ER14c	ExonRegion	0	24.05	3.57	43.21	21.82	9.43	3.78
99	E14_Da	NovelBoundary	0	0.00	0.00	13.26	6.36	4.08	0.00
100	E14a_E15a	KnownJunction	0	19.94	6.97	51.69	35.89	13.82	3.53
101	I14	Intron	0	1.92	0.34	3.41	1.07	20.61	13.61
102	I14_SR1	SilentIntronRegion	0	0.00	0.00	1.16	0.00	9.98	3.74
103	I14_AR1	ActiveIntronRegion	0	1.79	0.36	4.10	1.75	19.62	13.68
104	I14_SR2	SilentIntronRegion	0	3.55	0.54	3.13	0.00	30.49	20.11
105	E15_Aa	NovelBoundary	0	0.00	0.00	6.03	0.00	26.64	41.81
106	ER15a	ExonRegion	0	16.36	4.88	34.67	16.55	5.73	5.76
107	E15_Da	NovelBoundary	0	3.74	0.00	3.53	0.00	142.33	63.97
108	E15a_E16a	KnownJunction	0	18.86	2.98	36.60	14.46	12.40	0.00
109	E16_Aa	NovelBoundary	0	0.00	5.29	6.89	8.59	0.00	0.00
110	ER16a	ExonRegion	0	19.84	15.85	73.11	27.78	12.79	4.30
111	E16_Da	KnownBoundary	1	12.96	6.47	57.84	6.04	56.10	10.41
112	ER16b	ExonRegion	0	14.49	8.82	37.96	9.61	21.40	9.76
113	E16_Db	KnownBoundary	0	3.37	0.00	6.03	0.00	0.00	0.00
114	E16b_E17a	KnownJunction	0	3.19	0.00	6.49	2.61	8.07	9.07
115	E16b_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
116	E16b_E18b	KnownJunction	0	8.44	6.41	3.53	0.00	9.49	17.46
117	ER16c	ExonRegion	0	3.23	0.74	8.08	4.68	0.65	0.00
118	E16_Dc	NovelBoundary	0	10.73	6.58	16.57	11.91	8.99	0.00
119	I16	Intron	0	3.28	1.68	15.13	9.11	2.47	0.46
120	I16_AR1	ActiveIntronRegion	0	3.29	1.68	15.16	9.13	2.48	0.46
121	E17a_E18a	KnownJunction	0	7.47	0.00	23.11	5.33	4.08	0.00
122	ER17a	ExonRegion	0	7.88	0.00	18.25	2.73	5.54	3.70
123	ER18a	ExonRegion	0	12.79	0.17	34.34	14.48	16.77	1.92
124	E18_Da	KnownBoundary	0	17.35	0.00	54.14	30.34	56.52	4.28
125	ER18b	ExonRegion	0	20.91	4.64	44.17	13.98	25.41	2.58
126	E18_Ab	KnownBoundary	0	44.05	14.68	73.55	12.07	22.97	0.00
127	ER18c	ExonRegion	0	15.95	9.29	18.15	3.06	10.19	3.03
128	E18_Db	KnownBoundary	0	2.65	4.95	0.00	0.00	17.90	0.00
129	E18_Dc	KnownBoundary	0	7.47	11.76	6.09	0.00	13.57	0.00
130	ER18d	ExonRegion	0	6.33	12.47	4.35	0.00	8.52	0.00
131	ER18e	ExonRegion	0	1.23	1.64	0.60	0.00	1.73	0.20
132	E18_Dd	KnownBoundary	0	0.00	2.98	0.00	0.00	25.14	5.21
133	ER18f	ExonRegion	0	0.46	0.03	0.00	0.00	1.19	0.50
134	E18_De	KnownBoundary	0	3.25	2.59	3.30	2.45	21.31	8.73
135	ER18g	ExonRegion	0	19.14	6.29	1.81	0.00	107.13	63.11
136	IG3_AR3	ActiveIntergenicRegion	0	7.84	4.91	8.08	3.64	18.31	5.62
137	IG3_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	16.71	0.00
138	IG3_AR1	ActiveIntergenicRegion	0	73.83	29.41	21.45	11.06	156.59	67.32