Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	FANCL	Gene	0	40.73	21.72	20.55	18.89	98.10	81.84
2	449070	Transcript	0	0.00	0.00	1.42	0.28	0.00	0.00
3	402135	Transcript	0	0	0	0	0	0	0
4	233741	Transcript	0	0	0	0	0	0	0
5	417361	Transcript	0	0	0	0	0	0	0
6	446381	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
7	403295	Transcript	0	1.85	0.00	0.00	0.00	1.36	0.00
8	427708	Transcript	0	0.23	0.00	0.00	0.19	0.12	2.18
9	403676	Transcript	0	0	0	0	0	0	0
10	481670	Transcript	0	1.93	0.38	7.12	1.97	3.37	2.03
11	470506	Transcript	0	13.65	16.97	11.79	10.12	42.19	96.66
12	ER1a	ExonRegion	0	0.00	0.00	2.83	0.56	0.00	0.00
13	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
14	E1_Ae	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
15	ER1b	ExonRegion	0	0.00	0.00	6.52	2.15	0.00	0.00
16	ER1c	ExonRegion	0	3.03	7.41	11.71	4.12	0.24	0.40
17	E1_Af	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
18	E1_Ag	KnownBoundary	1	7.11	13.95	19.58	0.00	9.49	4.87
19	ER1d	ExonRegion	0	6.33	12.47	17.38	4.31	1.81	1.85
20	ER1e	ExonRegion	0	6.69	12.47	19.37	4.49	1.81	1.85
21	ER1f	ExonRegion	1	10.32	15.24	30.66	7.42	1.81	2.88
22	ER1g	ExonRegion	0	12.84	13.43	25.04	8.59	10.53	4.14
23	E1a_E2a	KnownJunction	0	3.62	0.00	5.35	3.37	17.65	0.00
24	E1a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
25	E1a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	21.14	0.00
26	E1a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
27	ER2a	ExonRegion	0	6.55	1.83	29.79	37.94	4.41	4.05
28	E2a_E3a	KnownJunction	0	10.30	3.49	73.04	73.68	4.25	24.68
29	ER3a	ExonRegion	0	9.71	20.84	48.16	73.50	3.65	11.51
30	E3_Da	NovelBoundary	0	0.00	0.00	19.64	11.74	0.00	0.00
31	E3a_E4a	KnownJunction	1	20.79	31.61	9.56	56.06	13.40	20.07
32	ER3b	ExonRegion	1	14.78	24.93	28.24	75.40	5.42	9.26
33	I3	Intron	0	0.43	1.25	7.25	6.93	0.15	1.19
34	I3_AR1	ActiveIntronRegion	0	0.00	0.00	5.59	9.79	0.00	0.60
35	I3_SR2	SilentIntronRegion	0	0.78	0.26	8.42	9.61	0.00	0.57
36	I3_AR2	ActiveIntronRegion	0	0.00	4.16	18.93	17.23	0.00	1.85
37	ER4a	ExonRegion	1	18.63	13.01	26.68	59.34	7.26	9.45
38	E4a_E5a	KnownJunction	0	20.67	5.46	50.04	56.55	12.74	16.71
39	ER5a	ExonRegion	0	7.00	11.58	24.44	41.59	12.08	18.37
40	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	5.16	0.00
41	E5a_E7a	KnownJunction	1	3.56	17.27	12.81	34.09	22.89	44.83
42	I5	Intron	0	1.80	0.98	7.20	5.50	0.20	1.24
43	I5_SR1	SilentIntronRegion	0	1.87	1.20	7.84	5.65	0.25	1.51
44	I5_AR1	ActiveIntronRegion	0	1.89	0.36	6.88	7.34	0.00	1.30
45	ER6a	ExonRegion	0	3.86	0.77	14.25	3.95	1.58	4.06
46	E6_Da	NovelBoundary	0	0.00	0.00	15.43	9.79	4.33	0.00
47	I6	Intron	0	2.17	1.36	10.51	5.51	1.36	0.62
48	I6_SR1	SilentIntronRegion	0	2.60	0.00	14.87	5.30	2.73	0.00
49	I6_AR1	ActiveIntronRegion	0	0.96	0.00	10.13	4.70	4.22	1.13
50	I6_SR2	SilentIntronRegion	0	2.10	1.61	10.30	5.47	0.64	0.58
51	I6_AR2	ActiveIntronRegion	0	4.10	0.73	11.90	7.01	6.53	0.49
52	I6_SR3	SilentIntronRegion	0	3.01	0.00	11.56	5.78	2.46	1.02
53	E7_Aa	NovelBoundary	0	11.69	4.84	6.49	9.62	38.95	4.45
54	ER7a	ExonRegion	0	23.53	20.35	33.15	55.61	23.34	14.47
55	E7a_E8a	KnownJunction	0	45.73	45.56	69.16	63.02	34.63	11.84
56	E8_Aa	NovelBoundary	0	0.00	9.62	0.00	9.95	0.00	0.00
57	ER8a	ExonRegion	0	44.34	27.76	47.76	70.68	37.34	21.87
58	E8_Da	NovelBoundary	0	0.00	7.76	6.55	11.26	3.66	3.78
59	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
60	E8a_E10a	KnownJunction	1	27.36	8.72	19.18	20.88	111.29	39.04
61	E8_Db	NovelBoundary	0	0.00	0.00	7.06	6.74	0.00	0.00
62	E8b_E10a	KnownJunction	1	3.74	9.62	3.24	0.00	27.22	0.00
63	ER8b	ExonRegion	0	2.11	7.06	2.17	7.32	12.17	2.34
64	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
65	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
66	I9_AR2	ActiveIntronRegion	0	1.07	1.12	9.86	4.10	1.22	0.66
67	I9_SR3	SilentIntronRegion	0	1.75	0.00	13.35	0.00	0.00	1.53
68	I9_SR4	SilentIntronRegion	0	4.60	0.71	6.29	6.06	1.49	1.67
69	E10_Aa	NovelBoundary	0	14.22	2.70	17.93	10.00	8.82	0.00
70	ER10a	ExonRegion	1	54.69	12.90	30.84	26.39	56.37	20.88
71	E10_Ab	KnownBoundary	1	84.90	4.72	59.15	52.63	104.29	45.42
72	ER10b	ExonRegion	0	57.22	18.62	33.80	29.91	53.48	34.77
73	E10a_E11a	KnownJunction	0	59.17	22.39	20.09	12.94	79.24	48.36
74	E10a_E11b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
75	I10	Intron	0	3.83	8.12	5.08	5.72	8.65	20.55
76	I10_AR1	ActiveIntronRegion	1	4.38	9.89	6.27	6.69	8.42	23.37
77	I10_SR2	SilentIntronRegion	0	1.90	6.78	2.49	8.38	0.00	0.00
78	I10_AR2	ActiveIntronRegion	0	5.00	7.94	4.39	4.54	15.92	30.42
79	E11_Aa	NovelBoundary	1	7.41	13.39	15.94	2.23	15.48	57.17
80	ER11a	ExonRegion	0	57.86	20.65	27.29	28.40	66.17	62.44
81	E11_Da	KnownBoundary	0	13.68	5.17	12.01	9.13	18.81	41.39
82	E11_Db	KnownBoundary	0	23.02	6.30	11.90	2.56	4.74	21.32
83	E11b_E11b	KnownJunction	1	61.94	8.72	21.52	31.26	119.53	65.65
84	ER11b	ExonRegion	0	92.90	28.05	45.62	36.62	76.84	89.78
85	ER11c	ExonRegion	0	14.18	16.16	12.47	13.09	26.23	34.23
86	E11_Ab	KnownBoundary	0	6.45	6.19	4.95	9.03	67.00	108.14
87	ER11d	ExonRegion	0	75.68	29.64	24.43	23.65	112.50	174.26
88	E11_Dc	KnownBoundary	1	6.99	6.19	3.13	0.00	62.68	245.82
89	E11c_E11c	KnownJunction	0	90.81	33.63	17.87	11.47	92.72	55.16
90	E11c_E12a	NovelJunction	0	9.58	0.00	0.00	0.00	14.98	4.28
91	E11_Dd	KnownBoundary	1	0.00	13.39	9.22	2.72	33.13	93.61
92	E11d_E11c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
93	ER11e	ExonRegion	1	7.92	12.47	8.69	4.31	54.69	146.25
94	ER11f	ExonRegion	1	13.13	17.77	11.11	7.15	58.16	159.09
95	E11_Ac	KnownBoundary	1	12.83	26.60	12.41	6.74	124.02	491.48
96	ER11g	ExonRegion	0	73.14	49.01	17.89	12.79	149.84	230.90
97	E11_De	NovelBoundary	1	0.00	0.00	3.47	2.83	47.94	190.75
98	E11e_E12a	KnownJunction	1	84.36	38.47	10.02	3.26	105.29	45.92
99	E11_Dg	NovelBoundary	1	0.00	8.94	7.74	5.71	26.64	98.73
100	ER11h	ExonRegion	1	2.11	0.00	0.00	2.15	3.62	29.62
101	ER11i	ExonRegion	0	1.17	0.00	0.00	0.96	0.60	10.90
102	I11	Intron	1	7.87	5.61	9.91	10.43	14.48	36.71
103	I11_AR1	ActiveIntronRegion	1	7.89	5.63	9.94	10.46	14.52	36.80
104	E12_Aa	NovelBoundary	0	25.31	16.42	0.00	5.33	22.47	53.14
105	ER12a	ExonRegion	0	71.39	38.95	14.12	8.35	76.50	46.05
106	ER12b	ExonRegion	0	129.61	65.74	26.31	13.46	126.60	94.72
107	E12_Db	NovelBoundary	1	3.74	9.67	10.59	5.93	18.48	92.94
108	E12b_E13a	KnownJunction	0	156.67	69.46	42.41	7.45	282.50	166.65
109	I12	Intron	1	6.92	12.15	5.02	10.38	6.62	21.76
110	I12_AR1	ActiveIntronRegion	1	7.67	13.95	4.98	10.04	7.14	26.16
111	I12_SR1	SilentIntronRegion	0	3.68	4.35	5.30	12.02	4.41	2.58
112	E13_Aa	NovelBoundary	1	7.05	14.68	2.90	22.02	9.24	10.41
113	ER13a	ExonRegion	0	153.58	74.76	41.38	19.11	183.77	131.53
114	E13_Da	NovelBoundary	0	116.90	35.72	29.09	35.61	231.64	175.05
115	E13_Db	NovelBoundary	1	3.74	8.21	0.00	14.68	9.16	5.21
116	E13b_E14a	KnownJunction	1	197.46	62.04	46.62	19.52	205.34	96.38
117	ER13b	ExonRegion	0	172.50	58.79	48.66	21.54	172.12	120.14
118	I13	Intron	1	4.29	14.35	2.65	4.38	8.08	11.29
119	I13_SR1	SilentIntronRegion	1	4.22	14.00	4.52	3.01	5.67	11.51
120	I13_SR2	SilentIntronRegion	1	4.31	14.36	0.76	5.53	10.04	11.03
121	E14_Aa	NovelBoundary	1	0.00	18.90	10.59	13.27	275.43	603.23
122	ER14a	ExonRegion	1	127.41	34.60	36.89	10.77	88.63	59.92
123	E14_Da	KnownBoundary	1	87.19	19.57	18.84	11.47	124.35	152.80
124	ER14b	ExonRegion	0	55.78	25.36	11.63	3.78	301.58	210.91
125	ER14c	ExonRegion	0	3.69	0.00	0.00	0.00	2.71	0.00