Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	MSH2	Gene	0	37.68	13.53	36.94	17.16	61.16	22.51
2	233146	Transcript	0	1.36	0.00	0.00	0.00	4.78	2.12
3	454849	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
4	394794	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
5	406134	Transcript	0	4.23	3.49	4.02	3.65	0.68	0.80
6	419559	Transcript	0	90.26	62.83	89.15	24.52	259.03	54.99
7	453755	Transcript	0	14.46	6.64	67.06	15.33	4.33	0.00
8	432737	Transcript	0	13.14	2.92	19.87	12.78	4.74	4.53
9	448533	Transcript	0	23.44	5.51	114.53	55.73	19.23	9.15
10	394792	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
11	422810	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
12	413880	Transcript	0	0.00	0.00	0.00	1.36	0.00	0.00
13	461394	Transcript	0	0.00	0.00	0.00	0.00	9.24	0.00
14	467323	Transcript	0	0.00	0.00	0.86	0.00	0.00	0.00
15	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
16	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
17	ER1b	ExonRegion	0	0.00	1.75	0.00	1.51	0.00	0.00
18	E1_Ac	KnownBoundary	0	0.00	3.32	0.00	0.00	0.00	0.00
19	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
20	E1_Ae	KnownBoundary	0	0.00	0.00	6.49	0.00	0.00	0.00
21	ER1c	ExonRegion	0	1.41	2.08	1.81	3.95	0.00	0.00
22	ER1d	ExonRegion	0	2.11	2.46	3.46	4.31	0.00	0.00
23	E1_Da	KnownBoundary	0	3.49	0.00	5.98	0.00	0.00	0.00
24	E1a_E1f	NovelJunction	0	0.00	0.00	9.62	0.00	0.00	0.00
25	E1a_E1g	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
26	E1_Af	KnownBoundary	1	0.00	6.64	26.53	0.00	0.00	0.00
27	ER1e	ExonRegion	0	2.11	4.16	15.68	2.90	0.00	0.00
28	ER1f	ExonRegion	1	2.11	4.16	18.83	2.15	0.00	0.00
29	ER1g	ExonRegion	0	3.64	3.53	16.07	5.57	0.00	0.00
30	E1_Ag	KnownBoundary	0	6.87	9.62	74.57	21.37	0.00	0.00
31	ER1h	ExonRegion	0	10.05	5.19	45.98	21.90	0.04	0.26
32	E1b_E2a	KnownJunction	0	17.53	2.87	31.42	23.65	0.00	0.00
33	ER2a	ExonRegion	0	10.02	11.08	26.38	27.20	1.82	1.14
34	E2a_E3a	KnownJunction	0	10.06	5.79	36.15	29.91	0.00	5.21
35	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
36	ER2b	ExonRegion	0	8.93	7.74	41.28	34.17	1.40	1.85
37	ER3a	ExonRegion	0	11.89	14.98	38.02	27.14	1.19	1.92
38	E3_Da	KnownBoundary	0	14.34	13.22	12.07	14.68	9.82	0.00
39	E3_Db	KnownBoundary	1	2.65	0.00	12.81	34.04	5.16	0.00
40	E3b_E3b	NovelJunction	1	2.65	0.00	18.05	39.26	9.49	0.00
41	E3b_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
42	ER3b	ExonRegion	0	9.15	7.89	15.57	30.16	5.42	0.00
43	ER3c	ExonRegion	0	9.14	5.79	60.33	24.47	3.82	2.58
44	E3_Dc	NovelBoundary	1	8.68	0.00	44.17	5.38	18.48	0.00
45	E3d_E3c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
46	E3e_E4a	KnownJunction	0	9.46	0.00	33.64	32.84	12.65	4.20
47	ER3d	ExonRegion	0	9.35	1.78	48.42	20.31	5.42	0.00
48	ER3e	ExonRegion	0	10.56	0.00	40.19	24.77	5.42	1.85
49	ER3f	ExonRegion	0	10.81	0.73	38.34	27.75	5.42	2.29
50	ER4a	ExonRegion	0	14.43	11.89	58.13	37.72	6.43	2.41
51	E4a_E5a	KnownJunction	0	7.05	16.76	45.54	39.20	18.89	9.15
52	E4a_E6a	KnownJunction	0	0.00	0.00	0.00	2.72	0.00	0.00
53	E5_Aa	NovelBoundary	0	2.83	3.49	3.53	0.00	25.39	12.93
54	ER5a	ExonRegion	0	17.38	22.13	51.91	30.28	6.28	8.36
55	E5_Ab	KnownBoundary	1	33.08	16.87	79.41	15.61	19.39	0.00
56	ER5b	ExonRegion	0	21.20	11.49	71.09	21.95	6.27	3.86
57	E5_Da	NovelBoundary	0	5.66	10.01	0.00	0.00	0.00	4.37
58	E5a_E6a	KnownJunction	0	19.52	10.35	88.29	38.82	0.00	17.21
59	ER6a	ExonRegion	0	14.16	17.51	86.32	46.88	3.50	9.21
60	E6_Da	KnownBoundary	0	9.82	7.31	25.79	21.37	9.57	3.86
61	E6a_E6b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
62	E6_Ab	KnownBoundary	0	3.01	0.00	44.97	35.45	4.41	10.75
63	ER6b	ExonRegion	0	16.89	18.70	106.45	53.86	14.46	11.11
64	ER6c	ExonRegion	0	15.42	10.98	111.77	39.93	20.37	16.66
65	E6_Db	NovelBoundary	0	0.00	0.00	0.00	0.00	13.15	15.36
66	E6b_E7a	KnownJunction	1	17.11	7.48	110.32	11.91	48.78	46.85
67	E7_Aa	NovelBoundary	0	0.00	9.22	11.16	3.37	0.00	0.00
68	ER7a	ExonRegion	0	22.57	7.32	110.58	34.50	18.91	17.91
69	E7_Da	KnownBoundary	0	14.76	5.62	53.34	19.47	16.48	12.26
70	E7a_E7b	KnownJunction	0	23.44	5.51	114.53	55.73	19.23	9.15
71	E7_Ab	KnownBoundary	0	6.81	0.00	71.50	36.10	0.00	4.37
72	ER7b	ExonRegion	0	25.34	8.31	132.52	50.62	12.66	5.55
73	ER7c	ExonRegion	0	21.33	8.75	110.97	39.58	8.16	11.74
74	E7_Db	NovelBoundary	0	0.00	6.86	0.00	0.00	5.16	0.00
75	E7b_E8a	KnownJunction	1	44.35	0.00	59.60	27.57	27.47	4.37
76	I7_AR1	ActiveIntronRegion	0	0.94	0.00	5.06	0.46	0.98	5.96
77	ER8a	ExonRegion	0	26.99	6.53	50.28	18.92	11.21	0.93
78	E8_Da	NovelBoundary	0	7.29	0.00	28.12	8.59	0.00	0.00
79	E8a_E9a	KnownJunction	0	20.61	13.50	25.73	11.26	5.16	0.00
80	ER9a	ExonRegion	0	25.79	8.03	44.25	23.62	4.70	0.00
81	E9_Da	KnownBoundary	0	16.93	4.72	22.37	15.71	3.75	0.00
82	E9a_E9b	KnownJunction	0	14.46	6.64	67.06	15.33	4.33	0.00
83	E9_Ab	KnownBoundary	0	0.00	6.86	43.04	13.59	8.32	0.00
84	ER9b	ExonRegion	0	25.34	7.62	83.28	33.03	9.04	0.00
85	ER9c	ExonRegion	0	26.51	9.95	118.21	52.16	12.54	4.86
86	E9b_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
87	E9b_E11a	KnownJunction	0	38.62	11.81	145.05	67.91	31.55	24.77
88	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
89	E10_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	14.27
90	ER11a	ExonRegion	0	37.89	8.85	87.89	43.59	6.25	4.01
91	E11_Da	KnownBoundary	1	24.89	0.00	10.99	11.26	0.00	0.00
92	E11a_E11b	KnownJunction	0	13.14	2.92	19.87	12.78	4.74	4.53
93	E11_Ab	KnownBoundary	0	5.30	0.00	12.75	8.54	8.49	4.70
94	ER11b	ExonRegion	1	27.45	0.00	64.45	30.16	3.62	1.85
95	ER11c	ExonRegion	0	22.21	3.34	71.60	38.29	9.78	10.87
96	E11b_E12a	KnownJunction	0	37.48	10.07	127.74	72.70	21.89	32.07
97	E12_Aa	NovelBoundary	0	8.86	0.00	12.24	6.52	8.32	0.00
98	ER12a	ExonRegion	1	41.86	3.84	84.88	37.83	9.13	7.52
99	E12a_E13a	KnownJunction	1	26.51	0.00	63.81	12.45	25.72	17.97
100	ER13a	ExonRegion	0	40.14	8.21	50.84	22.02	18.07	12.46
101	E13a_E14a	KnownJunction	0	54.17	23.96	21.12	15.44	42.53	13.27
102	ER14a	ExonRegion	0	63.16	32.68	43.77	15.64	39.53	20.26
103	E14a_E15a	KnownJunction	1	82.97	54.50	74.23	22.84	172.05	30.98
104	ER15a	ExonRegion	0	100.91	45.05	65.18	20.73	142.63	46.65
105	E15_Da	KnownBoundary	1	47.96	60.29	78.27	12.34	197.35	42.06
106	E15a_E15b	KnownJunction	1	90.26	62.83	89.15	24.52	259.03	54.99
107	E15_Ab	KnownBoundary	0	24.16	8.10	2.39	5.76	57.60	29.05
108	ER15b	ExonRegion	0	115.07	62.33	87.99	21.54	168.14	38.88
109	ER15c	ExonRegion	0	114.07	26.65	53.64	19.74	128.96	42.16
110	E15b_E16a	KnownJunction	1	153.35	19.18	44.97	30.56	335.27	51.97
111	ER16a	ExonRegion	1	152.18	20.02	43.79	15.44	106.46	30.44
112	E16_Ab	KnownBoundary	1	210.66	11.47	42.07	20.72	137.09	47.77
113	ER16b	ExonRegion	1	136.52	13.90	26.51	21.40	94.70	38.02
114	E16_Da	NovelBoundary	0	10.18	0.00	28.75	14.03	4.08	0.00
115	E16a_E17a	KnownJunction	1	128.35	17.60	18.61	19.08	183.53	86.48
116	E16a_E18a	KnownJunction	0	8.56	0.00	2.73	0.00	0.00	0.00
117	I16	Intron	0	14.93	2.22	9.15	2.18	35.92	12.04
118	I16_SR1	SilentIntronRegion	0	5.53	0.86	9.89	2.67	3.49	0.77
119	I16_AR1	ActiveIntronRegion	0	23.08	3.85	12.76	1.82	64.86	13.72
120	I16_SR2	SilentIntronRegion	0	23.59	1.98	4.25	2.74	61.00	39.37
121	I16_AR2	ActiveIntronRegion	1	10.12	2.84	1.49	0.00	26.00	2.54
122	E17_Aa	NovelBoundary	1	59.17	14.68	12.87	0.00	338.19	48.69
123	ER17a	ExonRegion	0	192.38	51.48	20.84	16.19	311.48	91.98
124	E17_Da	KnownBoundary	0	194.33	76.04	55.16	12.72	924.00	253.13
125	ER17b	ExonRegion	1	173.36	56.37	43.45	5.73	669.50	175.84
126	E17_Db	KnownBoundary	0	210.41	70.19	31.59	9.79	1543.10	416.17
127	ER17c	ExonRegion	0	84.91	44.01	28.77	6.04	512.18	207.09
128	ER17d	ExonRegion	0	2.71	0.00	0.00	0.00	9.56	4.23
129	I17_AR1	ActiveIntronRegion	1	8.77	3.15	3.94	1.83	15.70	0.74
130	ER18a	ExonRegion	0	3.81	0.00	2.01	6.72	4.92	1.63
131	E18_Da	KnownBoundary	0	3.74	0.00	2.56	11.53	9.32	5.21
132	E18a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	9.24	0.00
133	ER18b	ExonRegion	0	4.23	3.49	4.02	3.65	0.68	0.80
134	I18	Intron	0	28.08	8.55	14.00	7.22	12.87	3.89
135	I18_SR1	SilentIntronRegion	0	36.71	11.69	7.82	4.06	27.51	8.34
136	I18_AR1	ActiveIntronRegion	0	46.11	11.73	18.52	8.17	2.83	0.90
137	I18_SR2	SilentIntronRegion	0	31.73	9.68	29.69	15.73	1.94	0.00
138	I18_AR2	ActiveIntronRegion	0	13.16	4.29	14.05	9.99	0.69	0.00
139	I18_SR3	SilentIntronRegion	0	17.12	3.82	17.89	9.24	0.65	1.34
140	I18_AR3	ActiveIntronRegion	0	7.79	1.35	16.59	8.85	0.00	0.00
141	I18_AR4	ActiveIntronRegion	0	9.65	3.57	16.82	6.05	0.33	0.00
142	I18_SR4	SilentIntronRegion	0	9.33	3.08	14.10	8.32	0.70	0.00
143	Ix	Intron	0	5.76	6.48	0.85	2.10	0.00	0.00
144	Ix_SR1	SilentIntronRegion	0	5.79	6.51	0.85	2.11	0.00	0.00
145	Ix_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.50	16.97	0.00
146	Ix_SR1	SilentIntronRegion	0	1.30	0.64	4.32	1.56	17.25	3.05
147	ER19a	ExonRegion	0	0.00	0.00	1.71	0.00	0.00	0.00
148	E19a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
149	Ix_SR1	SilentIntronRegion	0	1.60	0.68	5.66	2.34	4.13	13.47
150	ER20a	ExonRegion	0	0.72	0.00	0.79	0.73	1.63	0.00