Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	MCM3AP	Gene	0	41.78	44.57	23.09	18.92	26.81	15.30
2	397708	Transcript	0	1.11	2.23	0.71	0.47	0.41	0.00
3	426537	Transcript	0	9.30	12.69	12.24	8.27	0.00	0.00
4	495475	Transcript	0	3.68	0.00	9.51	0.00	0.00	0.00
5	291688	Transcript	0	0	0	0	0	0	0
6	479557	Transcript	1	7.33	4.97	12.28	2.95	0.00	0.00
7	486937	Transcript	0	18.01	9.11	5.10	5.98	8.64	11.53
8	496607	Transcript	0	10.91	6.12	5.60	6.12	0.52	1.25
9	467026	Transcript	0	5.09	2.47	3.22	1.44	1.73	4.90
10	494755	Transcript	0	7.83	2.91	2.03	3.66	1.24	1.60
11	481113	Transcript	0	0.00	0.00	0.00	0.00	0.77	3.31
12	ER1a	ExonRegion	0	2.22	4.46	1.43	0.94	0.82	0.00
13	E1_Ab	KnownBoundary	0	3.37	12.88	0.00	3.15	4.66	0.00
14	ER1b	ExonRegion	0	2.05	3.78	0.72	1.70	1.31	0.00
15	E1_Da	KnownBoundary	0	0.00	9.67	0.00	0.00	0.00	0.00
16	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
17	ER1c	ExonRegion	0	2.99	7.84	6.95	1.81	0.00	0.00
18	E1_Ac	KnownBoundary	0	9.94	9.84	18.50	0.00	0.00	0.00
19	ER1d	ExonRegion	0	10.26	17.28	16.20	2.57	0.00	0.00
20	E1_Db	KnownBoundary	0	12.65	20.59	16.85	13.48	0.00	0.00
21	E1b_E2a	KnownJunction	0	3.68	0.00	9.51	0.00	0.00	0.00
22	ER1e	ExonRegion	0	11.77	15.34	10.30	10.07	0.00	0.00
23	E1_Dc	NovelBoundary	0	3.37	0.00	21.52	9.30	0.00	0.00
24	E1c_E2a	KnownJunction	0	13.14	14.91	19.47	12.94	0.00	0.00
25	I1_AR2	ActiveIntronRegion	0	2.21	0.00	3.03	5.26	0.00	0.00
26	ER2a	ExonRegion	0	16.46	26.87	28.06	14.87	0.00	0.00
27	E2_Ab	KnownBoundary	0	21.69	20.19	17.53	8.92	0.00	0.00
28	E2_Da	KnownBoundary	0	20.67	21.77	34.67	28.98	0.00	0.00
29	ER2b	ExonRegion	0	18.53	20.17	30.91	18.42	0.00	0.00
30	ER2c	ExonRegion	0	22.21	25.18	42.05	23.15	0.00	0.00
31	E2_Db	KnownBoundary	0	22.60	17.49	22.37	9.08	0.00	0.00
32	ER2d	ExonRegion	0	27.07	37.58	58.68	48.36	1.17	2.94
33	E2c_E3a	KnownJunction	0	41.76	83.47	98.42	69.81	0.00	5.21
34	E3_Aa	NovelBoundary	0	0.00	0.00	8.99	5.38	0.00	0.00
35	ER3a	ExonRegion	0	41.34	72.94	66.48	78.34	3.41	2.28
36	E3a_E4a	KnownJunction	0	21.87	29.19	50.89	56.38	15.15	4.03
37	ER4a	ExonRegion	0	34.00	66.80	94.55	96.91	3.04	1.80
38	E4a_E5a	KnownJunction	0	38.56	88.42	80.55	48.39	4.16	4.11
39	ER5a	ExonRegion	0	28.71	44.72	45.26	42.18	4.66	0.74
40	E5a_E6a	KnownJunction	1	36.33	66.20	71.56	53.45	24.39	0.00
41	I5_SR2	SilentIntronRegion	0	6.37	0.00	8.59	10.90	1.06	2.49
42	E6_Aa	NovelBoundary	0	14.94	0.00	13.95	13.48	9.07	14.36
43	ER6a	ExonRegion	0	27.96	42.28	39.42	32.85	6.29	0.42
44	E6_Da	NovelBoundary	0	12.71	3.49	6.15	3.37	0.00	9.49
45	E6a_E7a	KnownJunction	1	21.15	69.80	41.21	35.72	12.90	5.21
46	E7_Aa	NovelBoundary	0	0.00	0.00	13.04	0.00	0.00	3.78
47	ER7a	ExonRegion	0	24.08	44.39	32.79	25.54	7.55	7.47
48	E7a_E8a	KnownJunction	1	21.69	58.10	18.50	31.10	4.66	0.00
49	ER8a	ExonRegion	0	28.54	49.81	26.53	24.99	4.39	2.61
50	E8_Da	NovelBoundary	0	17.41	31.38	27.84	6.74	4.83	30.73
51	E8a_E9a	KnownJunction	0	47.42	45.39	33.02	50.13	0.00	7.30
52	E9_Aa	NovelBoundary	0	12.65	0.00	16.91	6.74	10.32	15.03
53	ER9a	ExonRegion	0	27.90	57.19	19.93	32.04	2.79	6.70
54	E9_Ab	KnownBoundary	0	45.92	27.62	28.63	13.76	3.75	13.68
55	ER9b	ExonRegion	0	23.02	27.34	14.82	5.11	1.78	3.34
56	E9_Da	NovelBoundary	0	11.87	9.00	32.05	10.06	8.57	12.85
57	E9a_E10a	KnownJunction	1	14.88	41.23	10.70	2.83	0.00	0.00
58	I9	Intron	0	10.14	5.27	11.74	4.60	10.62	8.28
59	I9_SR1	SilentIntronRegion	0	9.00	5.02	6.00	5.21	13.74	12.79
60	I9_AR2	ActiveIntronRegion	0	12.62	6.04	21.15	4.03	6.79	2.21
61	ER10a	ExonRegion	0	38.37	60.38	29.00	16.55	0.84	0.00
62	E10_Da	KnownBoundary	0	6.87	15.80	5.92	5.38	0.00	0.00
63	E10a_E11b	KnownJunction	0	18.92	33.58	13.09	5.22	0.00	0.00
64	ER10b	ExonRegion	0	7.33	4.97	12.28	2.95	0.00	0.00
65	E10_Db	NovelBoundary	0	8.98	3.43	6.32	6.63	0.00	0.00
66	I10_AR1	ActiveIntronRegion	0	8.97	6.57	6.48	4.67	3.27	5.52
67	E11_Aa	NovelBoundary	0	391.36	299.23	277.45	147.41	489.42	797.50
68	ER11a	ExonRegion	0	19.61	10.88	6.98	8.71	15.22	20.59
69	E11_Ab	KnownBoundary	0	15.06	32.12	0.00	0.00	0.00	4.70
70	ER11b	ExonRegion	0	45.72	56.56	27.17	20.26	0.00	1.16
71	E11a_E12b	KnownJunction	0	37.00	29.47	18.44	15.71	0.00	0.00
72	E12_Aa	NovelBoundary	0	3.74	3.49	0.00	6.52	0.00	0.00
73	ER12a	ExonRegion	0	10.91	6.12	5.60	6.12	0.52	1.25
74	E12_Ab	KnownBoundary	0	16.15	2.87	15.09	5.60	0.00	0.00
75	ER12b	ExonRegion	0	26.87	45.69	13.49	18.38	0.57	1.17
76	E12a_E13a	KnownJunction	1	14.16	45.73	9.11	8.59	0.00	0.00
77	ER13a	ExonRegion	0	22.24	42.24	8.94	9.06	0.68	0.00
78	E13a_E14a	KnownJunction	0	30.13	30.71	5.86	3.32	0.00	0.00
79	ER14a	ExonRegion	0	31.08	50.83	15.44	14.12	1.04	0.00
80	E14a_E15a	KnownJunction	1	31.21	78.91	13.09	15.12	8.99	0.00
81	E15_Aa	NovelBoundary	0	7.41	18.95	3.53	0.00	13.15	14.78
82	ER15a	ExonRegion	0	42.18	72.70	22.07	17.59	4.27	2.13
83	E15a_E16a	KnownJunction	0	64.11	66.43	24.88	14.57	3.41	0.00
84	ER16a	ExonRegion	0	57.78	75.36	21.32	19.94	4.82	2.47
85	E16a_E17c	KnownJunction	1	68.27	105.80	18.10	25.45	27.38	0.00
86	E17_Aa	NovelBoundary	0	1207.65	553.51	268.01	167.31	4630.22	7862.44
87	ER17a	ExonRegion	0	5.09	2.47	3.22	1.44	1.73	4.90
88	E17_Ab	KnownBoundary	0	2.83	0.00	5.07	6.36	0.00	12.51
89	E17_Ac	KnownBoundary	0	2.89	6.52	4.95	2.72	3.83	4.87
90	ER17b	ExonRegion	0	19.85	22.02	14.34	10.77	4.34	11.11
91	ER17c	ExonRegion	0	50.70	65.78	23.60	18.85	7.48	5.26
92	E17_Da	NovelBoundary	0	3.74	3.49	2.50	0.00	14.65	28.63
93	E17a_E18a	KnownJunction	0	104.66	100.85	41.84	31.43	7.99	0.00
94	E18_Aa	NovelBoundary	0	3.74	10.46	3.53	3.15	4.25	22.75
95	ER18a	ExonRegion	0	37.99	42.90	23.80	10.17	8.25	2.45
96	E18_Da	KnownBoundary	0	3.13	6.02	2.39	0.00	3.66	4.45
97	E18a_E19a	KnownJunction	0	26.93	65.08	31.25	16.20	9.07	0.00
98	ER18b	ExonRegion	0	7.83	2.91	2.03	3.66	1.24	1.60
99	ER19a	ExonRegion	0	31.82	63.50	12.75	7.99	8.31	0.00
100	E19_Da	NovelBoundary	0	3.74	0.00	13.32	6.36	0.00	0.00
101	E19a_E20a	KnownJunction	1	41.03	51.63	10.25	3.26	26.72	0.00
102	E20_Aa	NovelBoundary	0	16.15	0.00	6.26	3.04	0.00	0.00
103	ER20a	ExonRegion	0	42.48	56.42	28.08	11.12	24.25	6.32
104	E20a_E21a	KnownJunction	0	50.98	70.53	29.32	5.87	32.21	37.11
105	Ix	Intron	0	5.99	0.66	1.37	0.00	9.12	4.09
106	Ix_SR1	SilentIntronRegion	0	5.99	0.66	1.37	0.00	9.12	4.09
107	E21_Aa	NovelBoundary	0	9.94	16.54	0.00	3.37	23.14	58.52
108	ER21a	ExonRegion	0	46.76	50.19	19.72	5.57	21.19	13.21
109	E21_Da	NovelBoundary	0	17.23	6.07	5.81	0.00	78.16	116.87
110	E21a_E22a	KnownJunction	0	46.58	83.81	6.89	13.21	27.72	8.90
111	E21_Db	NovelBoundary	0	3.43	10.24	10.59	2.99	131.76	153.14
112	ER21b	ExonRegion	0	0.00	0.00	0.00	0.00	0.77	3.31
113	Ix	Intron	0	9.69	6.05	4.86	4.10	7.08	9.95
114	Ix_AR1	ActiveIntronRegion	0	11.24	5.98	5.32	4.96	8.33	12.26
115	E22_Aa	NovelBoundary	0	3.56	0.00	8.71	6.58	0.00	0.00
116	ER22a	ExonRegion	0	45.54	50.65	19.00	17.88	14.40	3.09
117	E22_Da	KnownBoundary	0	23.08	18.17	8.82	5.38	3.83	0.00
118	E22a_E22b	KnownJunction	1	53.51	40.22	14.69	11.58	42.87	4.87
119	ER22b	ExonRegion	0	16.40	7.35	3.22	3.25	2.05	2.48
120	E22_Ab	KnownBoundary	0	22.78	9.90	3.47	2.66	4.83	9.74
121	ER22c	ExonRegion	1	58.79	78.63	16.78	10.70	23.45	5.63
122	E22b_E23a	KnownJunction	0	73.57	87.69	7.34	4.73	38.70	14.10
123	Ix_AR5	ActiveIntronRegion	0	12.67	0.00	0.00	2.15	0.00	0.00
124	Ix_AR4	ActiveIntronRegion	0	9.21	0.00	0.00	2.15	0.00	0.00
125	ER23a	ExonRegion	0	64.80	75.74	21.13	11.94	32.29	10.78
126	E23a_E24a	KnownJunction	1	104.06	52.98	21.75	12.07	73.66	9.91
127	Ix_AR2	ActiveIntronRegion	0	6.00	0.83	1.15	6.12	0.00	0.00
128	ER24a	ExonRegion	0	82.40	67.14	22.59	9.67	66.58	20.74
129	E24a_E25a	KnownJunction	1	97.86	59.34	19.70	3.37	166.80	61.29
130	Ix_AR1	ActiveIntronRegion	0	4.33	1.77	6.68	7.36	4.01	0.63
131	E25_Aa	NovelBoundary	0	6.75	0.00	0.00	0.00	48.86	93.70
132	ER25a	ExonRegion	0	127.13	76.26	27.02	13.41	100.80	53.64
133	E25_Da	NovelBoundary	0	17.17	15.97	9.79	6.74	138.42	81.77
134	E25a_E26a	KnownJunction	1	298.81	112.38	48.61	34.20	273.59	236.67
135	E26_Aa	NovelBoundary	1	44.65	0.00	2.50	3.26	7.41	17.21
136	ER26a	ExonRegion	0	220.01	163.86	32.57	34.08	274.39	174.91
137	E26_Da	NovelBoundary	0	0.00	0.00	0.00	6.04	0.00	0.00
138	E26a_E27a	KnownJunction	0	323.39	279.37	68.82	43.99	614.11	414.24
139	ER27a	ExonRegion	0	336.30	283.44	37.23	32.10	412.41	236.49
140	E27a_E28a	KnownJunction	0	298.21	274.70	11.67	10.49	723.15	335.66
141	Ix	Intron	0	4.64	3.32	8.26	5.60	4.71	1.48
142	Ix_AR1	ActiveIntronRegion	0	4.92	5.33	11.55	7.71	6.08	2.01
143	E28_Aa	NovelBoundary	0	7.05	9.67	3.53	0.00	17.98	33.67
144	ER28a	ExonRegion	0	117.35	93.19	6.84	1.68	166.99	66.22
145	ER28b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00