Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	PTPRT	Gene	0	51.84	16.37	68.11	30.26	83.93	27.69
2	373201	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
3	373198	Transcript	0	0	0	0	0	0	0
4	373193	Transcript	0	0	0	0	0	0	0
5	373190	Transcript	0	7.41	3.43	23.23	11.53	0.00	0.00
6	373187	Transcript	0	0	0	0	0	0	0
7	373184	Transcript	0	0	0	0	0	0	0
8	356100	Transcript	0	0	0	0	0	0	0
9	485499	Transcript	0	0.69	0.00	5.64	1.40	0.00	0.00
10	452218	Transcript	0	0	0	0	0	0	0
11	454126	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
12	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
13	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
14	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
15	ER1c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
16	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
17	ER1d	ExonRegion	0	1.49	0.00	1.75	0.00	0.00	0.00
18	E1_Ae	KnownBoundary	0	7.47	0.00	3.30	0.00	0.00	0.00
19	ER1e	ExonRegion	0	3.47	0.29	8.27	1.88	0.00	0.00
20	E1a_E3a	KnownJunction	0	6.39	0.00	18.73	0.00	0.00	0.00
21	I1_AR1	ActiveIntronRegion	0	4.58	2.79	10.40	9.40	2.48	1.23
22	I1_AR3	ActiveIntronRegion	0	2.11	6.23	19.28	12.93	0.00	0.00
23	I1_AR4	ActiveIntronRegion	0	1.69	1.96	18.24	4.71	1.16	0.00
24	I1_AR5	ActiveIntronRegion	0	2.69	0.50	22.25	5.31	1.73	0.00
25	I1_AR6	ActiveIntronRegion	0	2.28	0.59	10.21	6.80	2.53	0.00
26	I1_AR7	ActiveIntronRegion	0	0.40	0.00	12.12	7.50	0.00	0.00
27	I1_AR9	ActiveIntronRegion	0	11.72	5.62	5.89	0.63	44.37	17.77
28	I1_AR10	ActiveIntronRegion	0	34.03	28.82	9.40	1.07	169.08	83.29
29	I1_AR12	ActiveIntronRegion	0	2.11	0.00	16.91	2.15	0.00	0.00
30	I1_AR14	ActiveIntronRegion	0	0.73	0.00	9.82	9.74	0.00	3.70
31	ER2a	ExonRegion	0	1.37	0.00	11.27	2.80	0.00	0.00
32	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
33	ER3a	ExonRegion	0	3.46	1.60	19.60	3.50	0.00	0.00
34	E3_Da	KnownBoundary	0	6.33	2.98	26.41	2.56	0.00	0.00
35	ER3b	ExonRegion	0	6.45	7.00	38.17	10.28	0.00	0.00
36	E3b_E4a	KnownJunction	0	6.75	13.27	53.40	15.61	0.00	0.00
37	ER4a	ExonRegion	0	3.59	10.11	32.68	11.99	1.00	0.52
38	E4a_E5a	KnownJunction	0	3.49	9.17	29.43	11.74	0.00	0.00
39	ER5a	ExonRegion	0	4.35	5.68	32.16	9.62	4.78	0.00
40	E5a_E6a	KnownJunction	0	6.69	0.00	39.11	13.27	0.00	0.00
41	ER6a	ExonRegion	0	3.49	2.83	28.39	15.32	0.95	0.00
42	E6a_E7a	KnownJunction	0	10.79	5.91	39.85	8.81	4.83	0.00
43	ER7a	ExonRegion	0	7.94	3.70	38.21	14.67	0.68	0.00
44	E7a_E8a	KnownJunction	0	10.48	6.36	71.95	18.05	5.16	0.00
45	ER8a	ExonRegion	0	10.10	7.80	58.41	27.65	1.13	0.28
46	E8a_E9a	KnownJunction	0	25.55	5.96	113.85	48.01	0.00	5.21
47	I8_AR3	ActiveIntronRegion	0	11.01	0.72	5.81	1.93	5.82	0.00
48	I8_AR5	ActiveIntronRegion	1	0.00	6.23	4.35	0.00	0.00	0.00
49	I8_SR6	SilentIntronRegion	1	0.71	0.00	8.13	2.58	19.49	0.75
50	I8_AR7	ActiveIntronRegion	0	1.62	0.00	10.77	3.42	96.24	21.46
51	I8_AR2	ActiveIntronRegion	0	11.50	5.07	5.96	2.42	27.83	6.07
52	ER9a	ExonRegion	0	12.82	7.35	78.63	32.89	1.27	2.09
53	E9a_E10a	KnownJunction	0	7.05	17.44	61.54	46.43	8.99	0.00
54	I9_AR2	ActiveIntronRegion	1	0.00	0.00	14.76	2.49	5.47	16.33
55	ER10a	ExonRegion	0	15.12	13.84	73.00	31.00	2.60	0.12
56	E10a_E11a	KnownJunction	0	13.20	11.92	149.14	54.81	4.25	0.00
57	ER11a	ExonRegion	0	18.55	14.25	104.67	67.86	3.58	2.18
58	E11a_E12a	KnownJunction	0	33.80	20.14	180.57	97.11	0.00	9.40
59	E12_Aa	NovelBoundary	0	0.00	6.41	3.30	6.74	0.00	0.00
60	ER12a	ExonRegion	0	19.94	9.64	89.94	51.07	3.21	2.43
61	E12_Da	NovelBoundary	0	0.00	3.04	9.91	2.77	9.07	19.06
62	E12a_E13a	KnownJunction	0	11.21	6.07	52.77	27.51	5.16	0.00
63	ER13a	ExonRegion	0	19.19	3.93	55.99	37.23	0.30	0.51
64	E13a_E14a	KnownJunction	1	40.43	3.04	37.00	47.14	0.00	5.21
65	ER14a	ExonRegion	0	25.68	9.10	57.42	60.67	0.00	4.40
66	E14a_E15a	KnownJunction	1	2.59	6.64	12.24	9.52	0.00	30.39
67	E14a_E16a	KnownJunction	0	11.21	8.61	58.52	36.70	0.00	0.00
68	ER15a	ExonRegion	0	4.56	1.46	8.19	7.94	0.00	6.82
69	E15a_E16a	KnownJunction	0	2.53	0.00	15.26	5.55	0.00	0.00
70	ER16a	ExonRegion	0	16.88	12.56	74.39	43.64	0.00	3.19
71	E16a_E19b	KnownJunction	0	3.74	0.00	20.61	16.53	0.00	0.00
72	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
73	E17a_E19a	KnownJunction	0	3.74	0.00	12.69	0.00	0.00	0.00
74	E17a_E19b	KnownJunction	0	10.73	0.00	39.85	22.02	0.00	0.00
75	ER17a	ExonRegion	1	11.61	0.00	49.17	26.57	0.00	0.00
76	E18a_E19b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
77	ER18a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
78	ER19a	ExonRegion	0	3.59	0.00	14.12	3.45	0.00	0.00
79	ER19b	ExonRegion	0	9.87	9.03	63.99	40.95	0.93	0.21
80	E19a_E20a	KnownJunction	0	6.33	2.42	21.57	11.96	0.00	3.69
81	E19a_E20b	KnownJunction	0	7.41	3.43	23.23	11.53	0.00	0.00
82	ER20a	ExonRegion	0	5.81	3.12	26.61	21.54	0.00	1.85
83	ER20b	ExonRegion	0	13.10	9.58	44.48	33.83	2.94	1.30
84	E20a_E21a	KnownJunction	0	23.02	24.64	52.54	23.98	0.00	0.00
85	ER21a	ExonRegion	0	15.31	11.47	40.09	19.80	0.00	0.80
86	E21a_E22a	KnownJunction	0	12.41	8.55	39.28	21.64	0.00	5.21
87	ER22a	ExonRegion	0	19.22	12.52	72.37	36.17	2.47	0.91
88	E22a_E23a	KnownJunction	0	23.44	7.87	78.56	35.56	5.16	0.00
89	ER23a	ExonRegion	0	17.40	2.64	79.21	33.13	2.20	0.00
90	E23a_E24a	KnownJunction	0	10.42	0.00	73.38	30.88	0.00	0.00
91	ER24a	ExonRegion	0	8.21	8.10	52.74	25.65	0.42	1.42
92	E24a_E25a	KnownJunction	0	0.00	6.97	5.69	5.87	0.00	0.00
93	E24a_E26a	KnownJunction	0	13.26	6.52	34.33	36.48	4.33	0.00
94	ER25a	ExonRegion	0	2.15	3.12	10.07	4.56	0.00	0.00
95	E25a_E26a	KnownJunction	0	3.19	0.00	15.03	2.56	0.00	0.00
96	ER26a	ExonRegion	0	13.21	12.84	86.34	40.95	0.85	2.42
97	E26a_E27a	KnownJunction	0	2.95	9.34	37.51	26.81	0.00	0.00
98	ER27a	ExonRegion	0	8.51	4.10	30.57	14.41	0.89	4.54
99	E27_Da	NovelBoundary	0	0.00	10.46	2.85	0.00	21.56	3.86
100	E27a_E28a	KnownJunction	0	15.61	8.44	21.86	16.42	0.00	0.00
101	ER28a	ExonRegion	0	12.59	20.32	87.73	42.61	0.00	0.00
102	E28a_E29a	KnownJunction	0	7.35	18.39	24.59	34.85	0.00	0.00
103	ER29a	ExonRegion	0	19.83	15.97	100.46	49.63	0.18	0.00
104	E29a_E30a	KnownJunction	0	24.95	27.90	203.85	74.11	3.83	0.00
105	ER30a	ExonRegion	0	15.99	10.59	65.77	29.54	1.42	0.00
106	E30a_E31a	KnownJunction	0	20.43	6.24	110.26	48.61	0.00	0.00
107	ER31a	ExonRegion	0	13.16	4.04	50.05	20.19	1.04	0.00
108	E31a_E32a	KnownJunction	0	19.58	6.19	29.72	9.46	0.00	0.00
109	ER32a	ExonRegion	0	24.77	11.61	40.76	21.54	1.08	0.00
110	E32a_E33a	KnownJunction	0	20.07	3.49	37.46	19.19	0.00	0.00
111	ER33a	ExonRegion	0	14.62	7.90	40.92	17.55	0.44	0.00
112	E33a_E34a	KnownJunction	0	9.46	6.86	58.23	34.36	5.16	0.00
113	ER34a	ExonRegion	0	22.96	8.31	64.01	32.42	0.55	1.03
114	E34a_E35a	KnownJunction	0	6.39	2.92	37.80	19.57	0.00	0.00
115	ER35a	ExonRegion	0	27.80	6.35	83.84	39.81	2.75	0.58
116	E35_Da	KnownBoundary	0	62.73	15.47	152.16	76.01	8.99	4.03
117	ER35b	ExonRegion	0	75.38	21.42	76.94	32.10	133.03	43.55