Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	ARNT	Gene	0	38.58	24.42	25.93	19.44	53.19	40.09
2	358595	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
3	354396	Transcript	0	0	0	0	0	0	0
4	394700	Transcript	0	1.32	1.56	2.47	1.30	0.01	0.02
5	342710	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
6	322733	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
7	368975	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
8	471844	Transcript	0	0.00	0.00	2.82	0.00	0.00	0.00
9	497108	Transcript	0	0	0	0	0	0	0
10	468970	Transcript	0	0.84	0.45	0.72	0.86	0.00	2.34
11	478972	Transcript	0	25.39	14.47	7.81	10.01	13.27	36.14
12	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
13	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
14	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
15	ER1c	ExonRegion	0	0.00	0.00	1.83	0.00	0.00	0.00
16	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	9.74
17	ER1d	ExonRegion	0	2.11	1.50	6.85	1.66	0.00	0.00
18	E1a_E2a	KnownJunction	0	10.73	5.74	27.04	6.31	0.00	0.00
19	ER2a	ExonRegion	0	6.54	14.32	30.90	16.18	1.40	1.26
20	E2a_E3a	KnownJunction	0	0.00	3.49	3.53	0.00	0.00	0.00
21	E2a_E3b	KnownJunction	0	3.74	18.11	38.99	35.23	0.00	0.00
22	I2_AR1	ActiveIntronRegion	0	9.18	0.00	0.85	0.00	0.00	1.85
23	ER3a	ExonRegion	0	4.34	2.49	5.28	2.71	0.05	0.00
24	E3_Ab	KnownBoundary	0	7.47	0.00	3.53	5.00	0.00	0.00
25	ER3b	ExonRegion	0	15.79	16.95	38.17	39.27	1.81	0.00
26	E3a_E4a	KnownJunction	0	21.27	28.07	44.06	37.68	7.82	0.00
27	ER4a	ExonRegion	0	16.75	20.50	37.61	25.13	1.04	0.00
28	E4_Da	NovelBoundary	0	6.39	3.21	17.13	3.32	0.00	0.00
29	E4a_E5a	KnownJunction	0	6.63	6.58	13.61	3.37	0.00	0.00
30	E4a_E6a	KnownJunction	0	3.74	0.00	13.21	3.26	0.00	0.00
31	E5_Aa	NovelBoundary	0	3.74	2.53	20.04	3.37	0.00	0.00
32	ER5a	ExonRegion	1	5.11	23.78	27.18	29.25	1.81	0.00
33	E5_Da	NovelBoundary	0	3.74	0.00	9.34	0.00	0.00	0.00
34	E5a_E6a	KnownJunction	1	3.74	30.32	33.42	45.89	4.66	0.00
35	E6_Aa	NovelBoundary	0	0.00	10.35	12.92	8.86	0.00	0.00
36	ER6a	ExonRegion	0	17.16	16.65	22.44	19.62	0.85	2.63
37	E6_Da	NovelBoundary	0	0.00	0.00	0.00	8.65	0.00	13.77
38	E6a_E7b	KnownJunction	0	7.23	5.91	9.73	10.11	0.00	0.00
39	ER7a	ExonRegion	0	1.21	0.89	0.93	1.23	0.00	0.00
40	ER7b	ExonRegion	0	14.52	5.71	10.14	8.80	0.00	0.00
41	E7_Da	KnownBoundary	0	20.07	18.11	15.54	13.54	0.00	0.00
42	ER7c	ExonRegion	0	18.63	15.71	20.01	14.15	0.00	2.73
43	E7_Db	NovelBoundary	0	0.00	0.00	0.00	6.09	0.00	0.00
44	E7b_E8a	KnownJunction	0	12.53	15.02	32.05	8.75	0.00	3.53
45	ER8a	ExonRegion	0	19.82	25.66	27.34	14.01	0.00	4.26
46	E8a_E9a	KnownJunction	0	28.20	31.78	12.81	6.74	0.00	14.19
47	ER9a	ExonRegion	1	22.42	34.75	25.94	26.76	0.00	9.87
48	E9a_E10a	KnownJunction	0	19.40	32.12	35.52	35.72	0.00	17.04
49	ER10a	ExonRegion	1	19.30	19.18	23.87	15.86	0.00	18.02
50	E10_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
51	E10a_E11b	KnownJunction	0	25.85	17.55	11.33	14.03	0.00	0.00
52	E10a_E11c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
53	ER10b	ExonRegion	0	0.48	0.00	0.51	0.49	0.00	4.68
54	E10_Db	NovelBoundary	0	2.71	0.00	13.43	2.94	0.00	0.00
55	E11_Aa	NovelBoundary	0	108.70	77.28	23.05	26.97	101.30	118.55
56	ER11a	ExonRegion	1	25.39	14.47	7.81	10.01	13.27	36.14
57	E11_Ab	KnownBoundary	0	16.45	0.00	0.00	8.81	5.16	0.00
58	E11_Ac	KnownBoundary	0	26.21	15.52	7.68	7.83	0.00	0.00
59	E11a_E22b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
60	ER11b	ExonRegion	0	40.54	18.70	12.31	22.26	1.81	0.00
61	ER11c	ExonRegion	0	38.20	15.86	12.25	20.17	1.81	0.00
62	ER11d	ExonRegion	0	27.49	16.75	26.81	17.45	0.22	0.00
63	E11b_E13a	KnownJunction	0	20.79	17.44	42.01	19.19	0.00	0.00
64	E11c_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
65	ER11e	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
66	E12a_E13b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
67	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
68	E13_Aa	NovelBoundary	0	3.68	3.49	12.01	0.00	8.82	0.00
69	E13_Ab	NovelBoundary	0	10.12	11.81	32.85	14.14	8.82	9.24
70	ER13a	ExonRegion	0	22.99	16.39	45.14	19.87	5.02	1.44
71	ER13b	ExonRegion	1	32.23	17.88	42.84	22.32	13.69	1.49
72	E13_Da	KnownBoundary	0	25.91	27.05	30.06	28.55	19.23	4.70
73	ER13c	ExonRegion	0	28.50	12.62	33.78	26.17	3.71	0.00
74	E13b_E14a	KnownJunction	0	31.75	5.91	40.93	24.47	0.00	0.00
75	I13	Intron	0	3.56	2.63	5.27	4.77	32.40	12.88
76	I13_SR1	SilentIntronRegion	0	3.58	2.64	5.29	4.79	32.53	12.93
77	ER14a	ExonRegion	0	43.83	26.29	68.22	49.26	1.45	1.85
78	E14a_E15a	KnownJunction	0	39.83	47.30	95.46	61.77	4.08	10.33
79	E14a_E16a	KnownJunction	0	0.00	0.00	5.64	0.00	0.00	0.00
80	ER15a	ExonRegion	0	44.73	27.38	56.07	74.92	4.73	10.19
81	E15_Da	NovelBoundary	0	3.49	0.00	6.77	0.00	20.31	25.27
82	E15a_E16a	KnownJunction	0	51.40	31.67	82.43	74.82	0.00	0.00
83	E15a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
84	E16_Aa	NovelBoundary	0	6.27	8.44	6.26	3.26	0.00	0.00
85	ER16a	ExonRegion	0	32.56	35.19	60.48	68.68	0.00	1.12
86	E16a_E17b	KnownJunction	0	45.43	13.05	45.03	40.78	0.00	0.00
87	E16a_E21c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
88	ER17a	ExonRegion	0	2.24	1.82	3.53	3.77	0.00	0.12
89	ER17b	ExonRegion	0	39.21	24.04	72.24	64.45	0.00	0.21
90	E17a_E18a	KnownJunction	0	63.81	46.51	86.75	67.53	0.00	0.00
91	E18_Aa	NovelBoundary	0	2.95	0.00	12.13	0.00	0.00	0.00
92	ER18a	ExonRegion	0	33.28	38.96	51.69	54.09	0.66	1.16
93	E18a_E19a	KnownJunction	0	49.47	31.72	112.48	89.72	5.16	0.00
94	ER19a	ExonRegion	0	28.08	41.23	62.81	48.56	1.90	0.00
95	E19a_E20a	KnownJunction	0	22.11	12.21	8.88	27.30	4.41	0.00
96	ER20a	ExonRegion	0	33.21	20.52	30.22	24.79	1.92	0.00
97	E20a_E21a	KnownJunction	0	27.42	13.05	25.27	10.11	0.00	0.00
98	E20a_E21b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
99	ER21a	ExonRegion	0	26.39	8.31	17.38	10.77	1.81	0.00
100	ER21b	ExonRegion	0	24.09	21.36	22.65	22.14	4.65	0.00
101	E21a_E22a	KnownJunction	0	62.85	25.37	51.12	33.71	0.00	0.00
102	ER21c	ExonRegion	0	41.55	24.35	37.98	28.52	2.46	0.00
103	ER22a	ExonRegion	0	24.69	20.91	30.91	20.84	1.75	0.41
104	E22a_E23a	KnownJunction	0	38.32	37.35	19.81	35.12	4.08	9.99
105	ER22b	ExonRegion	0	19.61	33.39	14.74	22.93	2.71	3.70
106	ER23a	ExonRegion	0	69.67	37.83	27.48	15.93	136.38	96.22
107	E23_Da	KnownBoundary	1	40.49	8.61	23.05	5.06	75.91	38.70
108	ER23b	ExonRegion	0	18.00	7.13	7.18	0.82	29.73	25.63
109	ER23c	ExonRegion	0	0.00	0.00	0.00	0.00	1.21	1.23
110	IG50_AR1	ActiveIntergenicRegion	0	1.47	0.48	5.32	5.75	0.00	0.43