Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	RFX5	Gene	0	37.89	19.63	17.03	8.68	44.93	13.83
2	452671	Transcript	0	1.25	0.00	0.00	0.00	0.00	0.00
3	368870	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
4	494217	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
5	444392	Transcript	0	0	0	0	0	0	0
6	437327	Transcript	0	0	0	0	0	0	0
7	290524	Transcript	0	77.85	29.98	18.60	9.27	143.96	34.79
8	478564	Transcript	0	0	0	0	0	0	0
9	412774	Transcript	0	0	0	0	0	0	0
10	430227	Transcript	0	0	0	0	0	0	0
11	413829	Transcript	0	0	0	0	0	0	0
12	452513	Transcript	0	0	0	0	0	0	0
13	421986	Transcript	0	0	0	0	0	0	0
14	422595	Transcript	0	0.00	0.76	0.00	0.00	0.00	0.00
15	450506	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
16	436271	Transcript	0	0	0	0	0	0	0
17	479681	Transcript	0	0	0	0	0	0	0
18	452456	Transcript	0	0	0	0	0	0	0
19	392746	Transcript	0	0	0	0	0	0	0
20	435314	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
21	458484	Transcript	0	0	0	0	0	0	0
22	469513	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
23	436637	Transcript	0	0	0	0	0	0	0
24	475144	Transcript	0	1.56	1.76	1.31	0.45	0.04	0.00
25	ER1a	ExonRegion	0	1.25	0.00	0.00	0.00	0.00	0.00
26	E1_Ac	KnownBoundary	0	3.43	0.00	0.00	0.00	0.00	0.00
27	ER1b	ExonRegion	0	2.11	0.00	0.00	0.00	0.00	0.00
28	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
29	E1_Ae	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
30	ER1c	ExonRegion	0	2.11	0.00	0.00	0.00	0.00	0.00
31	ER1d	ExonRegion	0	2.11	0.00	0.00	0.00	0.00	0.00
32	ER1e	ExonRegion	0	2.68	0.00	0.16	1.26	0.00	0.00
33	E1_Af	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
34	ER1f	ExonRegion	0	2.11	0.00	3.26	2.15	0.00	0.00
35	E1a_E3a	KnownJunction	0	12.53	0.00	23.62	7.39	4.99	0.00
36	ER1g	ExonRegion	0	5.52	0.00	5.85	2.15	1.67	0.00
37	ER1h	ExonRegion	0	6.33	0.00	13.04	6.46	1.81	0.00
38	ER1i	ExonRegion	0	8.18	0.00	16.57	8.62	1.81	0.00
39	ER1j	ExonRegion	0	0.00	0.00	4.35	0.00	0.00	0.00
40	ER1k	ExonRegion	0	0.00	0.00	4.42	0.00	0.00	0.00
41	E1b_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
42	ER2a	ExonRegion	0	0.00	1.53	0.00	0.00	0.00	0.00
43	E2_Ab	KnownBoundary	0	0.00	3.49	0.00	0.00	0.00	0.00
44	ER2b	ExonRegion	0	0.00	2.08	0.00	0.00	0.00	0.00
45	E2_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
46	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
47	ER2c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
48	E2_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
49	E2_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
50	ER2d	ExonRegion	0	0.00	0.00	0.00	0.54	0.00	0.00
51	E2_Ae	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
52	ER2e	ExonRegion	0	1.81	0.00	0.00	2.15	0.00	0.00
53	E2_Af	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
54	E2_Ag	KnownBoundary	0	3.74	0.00	0.00	0.00	0.00	0.00
55	ER2f	ExonRegion	0	2.11	0.00	0.67	2.15	0.00	0.00
56	ER2g	ExonRegion	0	2.11	0.00	2.17	2.15	0.00	0.00
57	ER2h	ExonRegion	0	3.61	0.00	2.17	1.41	0.00	0.00
58	E2b_E3a	KnownJunction	0	2.89	0.00	0.00	0.00	0.00	0.00
59	ER2i	ExonRegion	0	2.11	0.00	2.17	0.00	0.00	0.00
60	ER3a	ExonRegion	0	10.03	4.16	19.32	9.54	1.81	0.00
61	ER3b	ExonRegion	0	14.94	13.83	43.57	11.35	4.28	0.00
62	E3_Db	KnownBoundary	0	0.00	0.00	2.33	0.00	0.00	0.00
63	E3b_E4a	KnownJunction	1	10.00	10.12	45.71	6.31	5.16	0.00
64	E3_Dc	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
65	E3c_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
66	E3_Dd	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
67	E3d_E4a	KnownJunction	0	0.00	0.00	3.13	6.47	0.00	0.00
68	ER3c	ExonRegion	0	0.00	0.00	4.35	3.23	0.00	0.00
69	ER3d	ExonRegion	0	0.70	0.00	4.35	2.15	0.00	0.00
70	ER3e	ExonRegion	0	0.00	0.00	1.48	0.00	0.00	0.00
71	E3e_E4a	KnownJunction	0	0.00	0.00	3.53	0.00	0.00	0.00
72	ER4a	ExonRegion	0	19.68	17.41	46.33	18.34	3.56	0.00
73	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
74	E4b_E5a	KnownJunction	0	23.14	16.93	17.99	8.43	10.24	0.00
75	E4b_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
76	ER4b	ExonRegion	0	21.75	26.59	43.67	15.08	4.34	0.00
77	ER5a	ExonRegion	0	22.80	27.84	41.71	15.51	3.62	0.00
78	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
79	E5a_E7a	KnownJunction	0	25.61	20.59	9.96	6.04	3.83	0.00
80	ER5b	ExonRegion	0	19.80	22.14	21.43	13.30	3.62	0.00
81	E6_Aa	NovelBoundary	0	227.53	179.65	69.79	48.17	757.86	1455.72
82	ER6a	ExonRegion	0	6.09	1.00	0.00	2.07	0.87	0.89
83	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
84	ER7a	ExonRegion	0	21.47	24.93	40.37	21.00	1.81	0.00
85	ER7b	ExonRegion	0	29.20	21.19	36.68	21.36	0.00	0.00
86	E7_Da	KnownBoundary	0	33.20	21.60	46.68	23.98	0.00	0.00
87	E7_Db	KnownBoundary	0	6.27	0.00	4.72	0.00	0.00	0.00
88	ER7c	ExonRegion	0	27.34	15.06	36.93	22.19	0.72	0.00
89	E7_Dc	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
90	E7c_E8a	KnownJunction	0	18.38	15.52	10.08	13.92	4.58	0.00
91	ER7d	ExonRegion	0	21.77	14.41	12.90	13.46	1.81	0.00
92	ER7e	ExonRegion	0	0.52	0.00	0.00	0.00	0.00	0.00
93	ER7f	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
94	ER8a	ExonRegion	0	15.95	19.74	10.75	9.04	1.68	0.00
95	E8_Da	KnownBoundary	0	12.47	15.30	15.77	6.47	0.00	0.00
96	E8_Db	KnownBoundary	0	22.42	39.15	6.72	6.74	0.00	0.00
97	ER8b	ExonRegion	0	19.53	33.39	11.72	7.46	0.00	0.00
98	ER8c	ExonRegion	1	19.00	41.03	6.25	9.42	0.00	0.00
99	E8c_E9b	KnownJunction	0	2.65	0.00	0.00	5.33	0.00	0.00
100	E8c_E9c	KnownJunction	0	16.87	28.12	5.29	9.95	0.00	0.00
101	ER8d	ExonRegion	0	24.28	36.13	5.35	10.23	0.26	0.00
102	ER9a	ExonRegion	0	0.03	0.06	0.00	0.00	0.00	0.00
103	E9_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
104	ER9b	ExonRegion	0	0.47	2.08	0.32	0.00	0.00	0.00
105	E9_Db	KnownBoundary	0	0.00	5.96	0.00	0.00	0.00	0.00
106	ER9c	ExonRegion	0	2.11	2.08	2.17	0.00	0.00	0.00
107	E9_Ac	KnownBoundary	0	3.74	0.00	3.53	0.00	0.00	0.00
108	ER9d	ExonRegion	0	3.08	3.46	2.63	0.90	0.08	0.00
109	ER9e	ExonRegion	0	26.18	27.29	10.43	10.05	3.50	0.37
110	ER9f	ExonRegion	0	27.45	26.32	10.86	10.77	3.62	1.85
111	ER9g	ExonRegion	0	25.51	27.58	16.76	6.05	3.56	1.27
112	E9_De	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
113	E9e_E10a	KnownJunction	1	12.83	43.82	34.04	6.04	3.50	0.00
114	ER9h	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
115	ER10a	ExonRegion	0	14.87	26.65	21.25	6.09	1.81	0.00
116	ER10b	ExonRegion	0	29.67	25.84	23.40	10.77	1.33	1.49
117	E10c_E11a	KnownJunction	0	47.18	32.90	15.31	17.83	5.16	4.95
118	ER10c	ExonRegion	0	35.89	29.09	21.73	10.77	0.00	1.85
119	ER11a	ExonRegion	0	25.64	26.26	15.16	13.73	5.37	0.59
120	E11_Da	KnownBoundary	0	21.99	11.81	3.02	17.73	4.08	3.86
121	ER11b	ExonRegion	0	25.05	14.22	9.23	16.90	2.57	1.92
122	E11_Db	NovelBoundary	0	19.40	10.57	13.38	10.22	0.00	0.00
123	E11c_E12a	KnownJunction	0	33.08	17.44	9.73	12.23	9.66	4.11
124	ER11c	ExonRegion	0	26.26	21.81	10.86	13.87	4.29	2.89
125	ER12a	ExonRegion	0	28.26	14.19	10.43	14.87	4.48	1.72
126	E12a_E13a	KnownJunction	0	31.69	12.99	5.35	11.26	0.00	5.21
127	ER13a	ExonRegion	0	22.44	9.83	6.99	7.47	3.37	0.71
128	E13_Da	KnownBoundary	0	26.99	9.51	11.67	0.00	4.25	4.62
129	E13a_E13b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
130	ER13b	ExonRegion	0	41.16	26.54	23.51	11.07	18.45	11.99
131	E13_Db	KnownBoundary	0	155.28	62.26	119.89	48.99	119.36	75.14
132	ER13c	ExonRegion	0	77.88	35.09	40.08	17.34	50.32	44.52
133	E13_Ab	KnownBoundary	0	30.01	29.25	31.48	8.48	32.96	25.19
134	ER13d	ExonRegion	0	38.69	23.28	24.06	10.87	44.75	23.30
135	E13_Dc	KnownBoundary	0	44.89	25.54	33.42	14.79	146.99	108.22
136	ER13e	ExonRegion	0	33.00	20.63	19.17	8.09	48.05	33.13
137	E13_Dd	KnownBoundary	0	30.67	18.39	8.42	3.37	16.06	13.35
138	ER13f	ExonRegion	0	25.13	11.91	22.87	9.11	15.68	4.76
139	E13_De	KnownBoundary	0	20.31	18.28	34.67	9.03	29.47	9.07
140	ER13g	ExonRegion	0	77.85	29.98	18.60	9.27	143.96	34.79