Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	BX571672.5	Gene	0	5.95	1.98	5.30	4.31	9.58	11.29
2	416367	Transcript	0	3.62	1.83	4.17	1.44	7.71	3.68
3	439302	Transcript	0	1.89	0.66	0.71	0.87	4.40	15.41
4	422716	Transcript	0	1.35	1.89	1.09	1.00	3.56	12.38
5	429121	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
6	453561	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
7	456568	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
8	449527	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
9	412196	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
10	427309	Transcript	1	8.57	1.32	13.85	13.65	33.42	13.43
11	437865	Transcript	0	2.65	2.16	0.02	1.09	0.87	6.95
12	435585	Transcript	0	0	0	0	0	0	0
13	456937	Transcript	0	0.05	0.00	0.51	0.57	0.02	0.03
14	ER1a	ExonRegion	0	15.75	4.77	11.14	2.16	8.11	7.01
15	E1_Da	NovelBoundary	0	20.07	6.97	3.24	0.00	28.72	5.21
16	E1a_E3a	KnownJunction	0	8.98	2.36	19.87	9.41	39.54	9.40
17	E2_Aa	NovelBoundary	0	171.49	44.15	169.35	128.92	379.30	484.09
18	ER2a	ExonRegion	0	1.21	0.00	0.00	1.33	0.00	1.06
19	E2_Da	NovelBoundary	0	226.62	31.22	261.57	258.05	275.34	234.32
20	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
21	E3_Aa	NovelBoundary	0	6.51	2.47	8.31	2.99	9.07	0.00
22	ER3a	ExonRegion	0	14.32	3.90	10.62	9.21	13.86	28.34
23	E3_Da	NovelBoundary	0	0.00	2.53	13.26	0.00	14.15	0.00
24	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
25	E3a_E10a	KnownJunction	1	6.87	3.32	3.53	3.04	20.64	75.98
26	E3a_E14c	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	9.40
27	E4_Aa	NovelBoundary	0	14.10	2.64	24.76	6.25	0.00	0.00
28	ER4a	ExonRegion	0	1.40	1.34	1.33	0.00	0.03	1.24
29	E4_Da	NovelBoundary	0	14.94	0.00	12.58	9.68	0.00	0.00
30	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
31	E5_Aa	NovelBoundary	0	13.50	6.92	6.77	6.42	8.91	0.00
32	ER5a	ExonRegion	0	1.38	1.61	0.11	1.41	13.03	3.83
33	E5_Da	NovelBoundary	0	0.00	6.92	15.26	8.32	9.16	8.56
34	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
35	Ix	Intron	0	10.60	1.23	5.78	3.18	9.97	9.48
36	Ix_SR1	SilentIntronRegion	0	10.60	1.23	5.78	3.18	9.97	9.48
37	E6_Aa	NovelBoundary	0	10.91	3.49	13.09	9.03	58.35	107.38
38	ER6a	ExonRegion	0	5.07	6.34	5.08	0.00	8.64	11.61
39	E6_Da	NovelBoundary	0	7.05	6.97	9.96	0.00	42.62	34.42
40	E6a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
41	Ix	Intron	0	9.03	2.52	6.46	2.05	9.35	5.35
42	Ix_SR3	SilentIntronRegion	0	6.71	0.00	6.50	5.36	2.20	5.67
43	Ix_AR2	ActiveIntronRegion	0	22.03	4.30	7.88	3.37	31.55	19.85
44	E7_Aa	NovelBoundary	0	7.47	0.00	6.38	0.00	10.24	5.21
45	E7_Ac	NovelBoundary	0	3.01	0.00	6.89	3.37	22.56	5.21
46	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.66	0.00
47	ER7b	ExonRegion	0	0.00	0.00	0.00	0.00	1.81	1.23
48	ER7c	ExonRegion	0	0.00	0.00	0.00	0.00	1.92	0.99
49	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
50	E7a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
51	E8_Aa	NovelBoundary	0	3.13	0.00	10.08	2.56	0.00	0.00
52	ER8a	ExonRegion	0	0.00	0.00	0.00	0.30	0.00	0.00
53	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
54	E8a_E9b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
55	E8a_E9c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
56	E8a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
57	ER9a	ExonRegion	0	0.00	0.00	5.13	4.19	0.00	1.28
58	E9_Ab	KnownBoundary	0	3.74	0.00	37.63	10.11	0.00	15.11
59	E9_Ac	KnownBoundary	0	0.00	0.00	17.19	6.31	0.00	0.00
60	ER9b	ExonRegion	0	0.00	0.00	5.55	0.12	0.00	1.85
61	ER9c	ExonRegion	0	0.00	0.00	0.13	0.00	0.00	0.13
62	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
63	E10a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
64	ER10a	ExonRegion	1	3.88	1.88	2.38	3.47	11.66	37.14
65	ER11a	ExonRegion	0	3.81	0.00	2.17	1.74	1.81	5.04
66	E11_Da	NovelBoundary	0	2.71	0.00	47.82	5.55	29.72	4.62
67	E11a_E12a	KnownJunction	0	2.95	0.00	0.00	0.00	0.00	8.56
68	Ix	Intron	0	0.68	0.90	11.75	3.03	3.52	1.00
69	Ix_AR1	ActiveIntronRegion	0	0.70	0.34	15.35	3.31	3.13	0.55
70	ER12a	ExonRegion	1	6.45	3.29	18.53	12.65	15.45	41.57
71	E12_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
72	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
73	E12a_E13b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
74	E12a_E14b	KnownJunction	0	0.00	9.45	3.30	3.26	15.32	48.27
75	E12a_E14c	NovelJunction	0	82.19	33.18	44.57	42.63	208.84	346.15
76	ER12b	ExonRegion	1	8.57	1.32	13.85	13.65	33.42	13.43
77	E12_Db	NovelBoundary	1	26.81	0.00	18.96	23.49	94.81	27.37
78	E13_Ab	NovelBoundary	0	15.49	13.78	6.20	8.59	38.54	29.72
79	ER13a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
80	ER13b	ExonRegion	0	4.96	2.44	0.85	3.38	3.54	4.67
81	E13a_E14c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	5.04
82	ER14a	ExonRegion	0	2.65	2.16	0.02	1.09	0.87	6.95
83	E14_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
84	E14_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	5.16	10.41
85	E14_Ad	KnownBoundary	0	8.19	13.84	5.12	7.56	58.18	95.21
86	ER14b	ExonRegion	1	12.67	12.47	6.52	8.62	14.46	54.92
87	ER14c	ExonRegion	1	19.00	11.57	10.09	8.62	17.43	74.84
88	ER14d	ExonRegion	1	22.12	4.16	9.66	1.41	13.28	58.02
89	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
90	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
91	ER15a	ExonRegion	1	5.61	3.44	0.37	0.59	7.04	28.92
92	ER16a	ExonRegion	1	13.07	6.86	0.54	8.73	7.48	41.49
93	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
94	E16a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
95	ER17a	ExonRegion	0	0.16	0.00	1.53	1.70	0.07	0.09
96	E17_Da	NovelBoundary	0	6.69	3.21	2.79	5.60	0.00	0.00
97	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
98	ER18a	ExonRegion	1	13.56	4.89	6.40	2.88	6.34	44.53
99	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
100	E18a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
101	ER19a	ExonRegion	0	0.00	0.00	2.04	2.02	0.00	5.21
102	ER20a	ExonRegion	1	1.79	0.00	0.11	2.15	3.16	19.16
103	ER20b	ExonRegion	0	1.08	0.00	0.00	0.43	0.00	6.18
104	E20b_E21a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
105	ER21a	ExonRegion	0	0.27	0.00	0.00	0.00	0.00	0.00
106	E21_Da	KnownBoundary	1	86.17	12.66	19.64	12.13	37.46	136.68
107	ER21b	ExonRegion	0	1.39	0.00	0.00	0.00	1.37	0.00