Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	MYSM1	Gene	0	4.13	2.28	25.24	13.60	1.98	2.55
2	472487	Transcript	0	0.00	0.00	0.33	0.00	0.00	0.00
3	466774	Transcript	0	0.00	0.00	3.13	6.04	0.00	0.00
4	489282	Transcript	0	2.58	0.00	7.43	2.52	0.30	0.00
5	483003	Transcript	0	0.50	0.22	1.14	0.06	6.19	1.22
6	401044	Transcript	0	3.25	2.11	12.53	1.62	0.29	0.00
7	493821	Transcript	0	0.65	1.69	29.02	13.45	0.37	0.00
8	481973	Transcript	0	4.62	0.78	2.48	5.89	3.59	7.87
9	ER1a	ExonRegion	0	0.00	0.00	0.67	0.00	0.00	0.00
10	ER1b	ExonRegion	0	0.00	0.00	2.17	0.00	0.00	0.00
11	ER1c	ExonRegion	0	0.00	0.00	2.17	0.00	0.00	0.00
12	ER1d	ExonRegion	0	0.27	0.55	3.30	0.02	0.25	2.85
13	E1a_E2a	KnownJunction	0	2.53	3.04	5.29	0.00	8.74	26.95
14	ER2a	ExonRegion	0	7.67	4.29	19.61	19.99	5.63	11.46
15	E2a_E3a	KnownJunction	0	12.23	13.56	42.24	38.93	19.64	12.43
16	E3_Aa	NovelBoundary	0	0.00	0.00	5.86	6.04	0.00	0.00
17	ER3a	ExonRegion	0	16.12	11.94	66.67	34.59	9.27	17.42
18	E3_Da	KnownBoundary	0	6.69	0.00	5.64	0.00	0.00	0.00
19	E3a_E4a	KnownJunction	0	19.64	13.78	93.98	52.36	23.56	64.98
20	ER3b	ExonRegion	0	2.58	0.00	7.43	2.52	0.30	0.00
21	E3_Db	NovelBoundary	0	3.74	0.00	8.88	3.37	4.00	0.00
22	E4_Ab	NovelBoundary	0	15.00	2.36	44.06	29.42	33.13	20.15
23	ER4a	ExonRegion	0	14.78	8.31	71.24	41.38	16.27	22.99
24	ER4b	ExonRegion	0	13.14	4.16	57.17	35.98	18.05	13.27
25	E4a_E5a	KnownJunction	0	9.88	11.25	36.94	27.46	47.11	28.21
26	E4a_E8a	KnownJunction	0	0.00	0.00	3.13	6.04	0.00	0.00
27	E5a_E7a	KnownJunction	0	0.00	0.00	56.75	15.71	0.00	0.00
28	ER5a	ExonRegion	0	5.81	2.94	61.28	22.62	12.28	9.26
29	ER5b	ExonRegion	0	0.50	0.22	1.14	0.06	6.19	1.22
30	E5_Db	NovelBoundary	0	9.40	5.01	16.45	3.37	31.05	15.36
31	I5_AR1	ActiveIntronRegion	0	0.71	0.00	7.65	5.31	1.82	1.24
32	E6_Aa	NovelBoundary	0	0.00	0.00	17.82	12.61	0.00	0.00
33	ER6a	ExonRegion	0	1.30	0.29	34.07	10.37	0.74	0.00
34	E6_Da	NovelBoundary	0	0.00	0.00	51.97	37.52	0.00	0.00
35	E6a_E7a	KnownJunction	0	0.00	3.09	23.97	16.53	0.00	0.00
36	I6	Intron	0	1.04	0.00	16.08	2.13	0.00	0.00
37	I6_SR1	SilentIntronRegion	0	1.06	0.00	16.29	2.15	0.00	0.00
38	E7_Aa	NovelBoundary	0	6.81	2.87	59.77	25.94	5.16	0.00
39	ER7a	ExonRegion	0	0.00	3.47	70.35	37.79	0.11	2.91
40	E7_Da	NovelBoundary	0	0.00	0.00	10.30	0.00	0.00	0.00
41	E7a_E8a	KnownJunction	0	0.00	8.44	93.41	51.55	0.00	20.23
42	E8_Aa	NovelBoundary	0	0.00	0.00	30.46	8.21	0.00	3.86
43	ER8a	ExonRegion	0	7.89	5.25	102.79	69.50	1.30	5.59
44	E8a_E9a	KnownJunction	0	19.76	2.98	160.30	117.01	0.00	8.23
45	E9_Aa	NovelBoundary	0	10.91	0.00	8.94	0.00	0.00	0.00
46	ER9a	ExonRegion	0	4.87	9.55	79.72	74.25	1.00	6.90
47	E9_Da	KnownBoundary	0	0.00	0.00	89.03	77.37	0.00	9.82
48	ER9b	ExonRegion	0	15.50	9.49	83.19	61.74	1.07	4.27
49	E9_Ab	KnownBoundary	0	15.55	9.84	67.06	60.79	5.16	8.82
50	ER9c	ExonRegion	0	12.67	5.28	42.14	46.87	2.26	3.57
51	E9_Db	NovelBoundary	0	0.00	0.00	2.68	0.00	7.49	10.41
52	E9b_E10a	KnownJunction	0	29.28	16.42	43.66	63.02	3.66	7.72
53	E10_Aa	NovelBoundary	0	7.11	0.00	15.09	7.88	4.74	13.94
54	ER10a	ExonRegion	0	19.57	12.18	49.97	47.20	3.63	19.09
55	E10_Da	KnownBoundary	0	12.53	6.75	18.67	7.94	8.16	13.68
56	E10a_E11a	KnownJunction	0	16.63	4.84	73.49	40.67	9.32	63.56
57	ER10b	ExonRegion	0	4.62	0.78	2.48	5.89	3.59	7.87
58	E10_Db	NovelBoundary	0	3.19	0.00	6.03	5.60	0.00	0.00
59	I10	Intron	0	1.95	0.17	12.77	4.34	0.00	0.93
60	I10_SR1	SilentIntronRegion	0	1.95	0.17	12.80	4.35	0.00	0.93
61	E11_Aa	NovelBoundary	0	0.00	5.85	15.03	3.04	0.00	0.00
62	ER11a	ExonRegion	0	16.63	19.24	52.73	31.40	0.89	21.84
63	E11a_E12a	KnownJunction	0	12.35	15.80	40.02	39.69	0.00	45.84
64	ER12a	ExonRegion	0	10.07	7.88	58.94	37.04	1.76	25.32
65	E12_Da	NovelBoundary	0	0.00	0.00	12.98	3.37	0.00	0.00
66	E12a_E13a	KnownJunction	0	16.75	9.45	59.94	37.79	0.00	20.49
67	I12	Intron	0	0.18	0.87	10.55	2.88	0.30	0.31
68	I12_SR1	SilentIntronRegion	0	0.18	0.87	10.57	2.89	0.30	0.31
69	E13_Aa	NovelBoundary	0	0.00	0.00	9.28	8.75	0.00	8.31
70	ER13a	ExonRegion	0	8.21	8.99	41.28	17.81	0.00	2.89
71	E13_Da	NovelBoundary	0	6.81	0.00	25.62	13.87	0.00	0.00
72	E13a_E14a	KnownJunction	0	6.09	0.00	23.28	14.52	0.00	0.00
73	I13	Intron	0	3.84	0.69	17.95	11.04	0.75	0.00
74	I13_SR1	SilentIntronRegion	0	3.85	0.69	17.98	11.06	0.75	0.00
75	E14_Aa	NovelBoundary	0	2.77	2.64	22.66	2.56	4.99	0.00
76	ER14a	ExonRegion	0	2.92	2.61	24.41	12.49	0.00	0.00
77	E14_Da	NovelBoundary	0	3.74	3.49	24.08	16.64	9.24	0.00
78	E14a_E15a	KnownJunction	0	0.00	0.00	15.09	3.21	0.00	0.00
79	E14a_E16a	KnownJunction	0	0.00	2.70	6.60	0.00	0.00	0.00
80	I14_AR1	ActiveIntronRegion	0	2.09	1.41	8.89	1.49	1.50	0.00
81	E15_Aa	NovelBoundary	0	3.13	0.00	6.77	5.60	9.41	0.00
82	ER15a	ExonRegion	1	1.74	2.08	24.32	3.89	2.55	0.00
83	E15_Da	NovelBoundary	0	3.31	0.00	2.73	7.94	8.49	0.00
84	E15a_E17a	KnownJunction	1	3.74	2.59	36.72	0.00	10.32	0.00
85	E16_Aa	NovelBoundary	0	3.43	0.00	15.26	2.72	9.24	0.00
86	ER16a	ExonRegion	0	2.28	3.64	14.35	2.56	0.87	0.00
87	E16a_E17a	KnownJunction	0	7.47	0.00	16.62	2.28	0.00	0.00
88	ER17a	ExonRegion	0	7.88	2.27	53.47	16.26	7.42	0.00
89	E17a_E18a	KnownJunction	0	14.22	2.31	63.42	16.31	0.00	0.00
90	E18_Aa	NovelBoundary	0	12.47	0.00	5.46	0.00	8.66	8.73
91	ER18a	ExonRegion	0	11.92	6.79	54.39	25.08	12.16	0.74
92	E18_Da	NovelBoundary	0	18.68	7.37	6.94	3.37	23.31	12.26
93	E18a_E19a	KnownJunction	0	10.48	0.00	52.09	22.67	9.41	0.00
94	ER19a	ExonRegion	1	4.18	1.19	62.99	14.64	4.15	2.12
95	E19_Da	NovelBoundary	0	2.71	0.00	43.78	17.56	5.08	0.00
96	E19a_E20a	KnownJunction	0	3.49	0.00	25.22	12.40	11.57	0.00
97	I19	Intron	0	0.80	0.07	11.36	4.40	1.19	1.67
98	I19_SR1	SilentIntronRegion	0	0.81	0.07	11.37	4.41	1.19	1.67
99	E20_Aa	NovelBoundary	0	0.00	0.00	16.91	9.19	0.00	0.00
100	ER20a	ExonRegion	1	1.67	9.92	58.45	14.47	4.42	1.57
101	E20a_E21a	KnownJunction	0	3.01	12.71	48.61	13.38	0.00	9.07
102	ER21a	ExonRegion	0	5.79	7.20	45.29	14.52	7.23	2.65
103	E21_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	9.57	0.00
104	E21a_E22a	KnownJunction	0	14.04	10.46	52.88	18.98	28.30	4.37
105	ER22a	ExonRegion	0	6.20	1.77	51.34	20.48	2.90	4.20
106	E22_Da	KnownBoundary	0	3.13	3.49	29.26	6.20	4.08	3.78
107	ER22b	ExonRegion	0	0.96	0.05	3.29	1.19	1.02	0.31
108	ER22c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00