Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	MDM4	Gene	0	43.70	38.45	22.66	23.52	37.34	41.68
2	470797	Transcript	0	11.93	6.64	27.41	24.44	6.46	3.13
3	454264	Transcript	0	0	0	0	0	0	0
4	367182	Transcript	0	0	0	0	0	0	0
5	367183	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
6	463049	Transcript	0	2.77	0.00	3.47	0.00	0.00	0.00
7	367181	Transcript	0	0	0	0	0	0	0
8	470908	Transcript	0	9.10	15.52	16.28	34.26	0.00	8.65
9	471783	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
10	367180	Transcript	0	0.86	0.42	1.33	2.20	1.11	0.00
11	367179	Transcript	0	1.00	0.00	3.09	0.00	0.00	0.00
12	462012	Transcript	0	17.67	16.66	43.60	35.23	3.50	2.33
13	391947	Transcript	0	2.12	1.25	1.69	1.13	3.28	3.90
14	444261	Transcript	0	0	0	0	0	0	0
15	ER1a	ExonRegion	0	2.11	0.00	0.00	0.00	0.00	0.00
16	ER1b	ExonRegion	0	5.57	2.27	0.20	0.00	0.00	0.00
17	E1_Ad	KnownBoundary	0	11.03	6.97	3.47	0.00	0.00	0.00
18	ER1c	ExonRegion	0	6.33	8.64	13.38	5.60	0.00	0.00
19	E1_Ae	KnownBoundary	1	3.62	28.57	69.56	52.14	0.00	4.03
20	ER1d	ExonRegion	0	6.33	20.15	40.41	17.88	0.00	0.00
21	E1_Af	KnownBoundary	0	9.70	19.46	51.35	14.35	3.75	0.00
22	ER1e	ExonRegion	1	3.32	20.38	47.59	19.39	0.00	0.00
23	ER1f	ExonRegion	1	3.14	12.80	42.86	15.89	0.00	0.00
24	E1a_E2a	KnownJunction	0	6.69	0.00	16.96	2.83	0.00	0.00
25	E2_Aa	NovelBoundary	0	0.00	0.00	11.67	0.00	0.00	0.00
26	ER2a	ExonRegion	1	6.33	3.56	20.79	5.23	0.00	0.00
27	ER2b	ExonRegion	0	27.57	28.07	58.04	39.98	0.03	2.03
28	E2a_E3a	KnownJunction	0	37.84	40.44	123.47	76.94	0.00	5.21
29	E2a_E13b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
30	ER3a	ExonRegion	0	31.73	22.13	64.62	52.48	3.23	1.63
31	E3a_E4a	KnownJunction	0	44.35	24.13	40.99	59.27	4.00	4.87
32	E3a_E9d	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
33	E4_Aa	NovelBoundary	0	2.89	0.00	12.07	0.00	0.00	0.00
34	ER4a	ExonRegion	0	37.55	25.64	65.03	92.31	2.75	15.31
35	E4a_E5a	KnownJunction	0	21.87	24.35	45.43	91.67	17.06	9.49
36	ER5a	ExonRegion	0	31.56	27.49	49.54	76.48	6.72	11.64
37	E5_Da	KnownBoundary	0	20.01	10.69	41.44	37.30	0.00	0.00
38	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
39	E5a_E8a	KnownJunction	0	26.21	10.01	18.61	24.74	4.91	10.07
40	E5a_E8b	KnownJunction	0	2.77	0.00	3.47	0.00	0.00	0.00
41	E5a_E9d	KnownJunction	0	9.10	15.52	16.28	34.26	0.00	8.65
42	ER5b	ExonRegion	0	11.93	6.64	27.41	24.44	6.46	3.13
43	E5_Db	NovelBoundary	0	10.06	6.07	33.47	8.97	7.74	14.19
44	E6_Aa	NovelBoundary	0	6.39	0.00	30.85	13.10	20.39	0.00
45	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
46	E6_Db	NovelBoundary	0	18.92	2.81	0.00	0.00	0.00	0.00
47	E6b_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
48	ER6b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
49	I6	Intron	0	11.63	4.20	13.25	8.39	3.45	1.70
50	I6_SR1	SilentIntronRegion	0	13.36	5.35	11.30	8.20	4.27	1.39
51	I6_AR1	ActiveIntronRegion	0	7.89	1.70	17.50	8.80	1.69	2.38
52	E7_Aa	NovelBoundary	0	3.13	10.46	20.66	9.95	3.91	0.00
53	ER7a	ExonRegion	0	2.59	1.27	3.99	6.60	3.32	0.00
54	I7	Intron	0	3.13	1.32	6.44	8.21	1.91	0.39
55	I7_AR1	ActiveIntronRegion	0	3.15	1.33	6.47	8.25	1.92	0.39
56	E8_Aa	NovelBoundary	0	0.00	6.64	22.66	6.63	12.82	0.00
57	E8_Ab	NovelBoundary	0	23.44	17.66	21.92	22.40	9.07	33.33
58	ER8a	ExonRegion	0	20.41	14.89	18.18	19.39	2.71	12.03
59	ER8b	ExonRegion	1	19.28	20.99	39.33	47.00	0.81	14.13
60	E8_Da	NovelBoundary	0	7.35	0.00	6.32	12.40	10.32	0.00
61	E8a_E9d	KnownJunction	1	22.23	29.70	68.37	87.76	0.00	31.99
62	I8	Intron	0	6.69	4.23	15.72	3.41	0.41	0.42
63	I8_AR1	ActiveIntronRegion	0	6.91	4.63	16.68	3.73	0.45	0.36
64	E9_Aa	NovelBoundary	0	10.18	29.14	39.56	11.53	4.74	4.45
65	E9_Ab	NovelBoundary	0	7.47	0.00	13.61	10.11	0.00	13.77
66	ER9a	ExonRegion	0	1.00	0.00	3.09	0.00	0.00	0.00
67	ER9b	ExonRegion	0	7.04	3.09	11.81	5.52	3.34	1.42
68	E9_Ac	KnownBoundary	0	11.21	9.45	23.45	14.74	10.32	4.45
69	ER9c	ExonRegion	0	18.18	13.79	26.58	15.22	6.29	5.00
70	E9_Da	KnownBoundary	0	30.13	19.18	32.79	17.73	13.32	13.35
71	E9a_E9e	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
72	ER9d	ExonRegion	0	17.67	16.66	43.60	35.23	3.50	2.33
73	E9_Ad	KnownBoundary	0	14.40	8.49	36.20	35.67	0.00	5.12
74	E9_Ae	KnownBoundary	0	32.42	49.27	149.77	159.26	3.66	3.86
75	ER9e	ExonRegion	1	52.26	57.13	158.96	166.59	1.81	17.28
76	ER9f	ExonRegion	0	45.75	34.63	91.50	116.80	8.44	3.89
77	E9b_E10a	KnownJunction	1	27.90	34.98	46.51	75.42	39.37	5.21
78	E9b_E12a	NovelJunction	0	0.00	0.00	2.68	9.24	0.00	5.21
79	ER10a	ExonRegion	1	30.61	29.43	55.40	61.04	18.08	3.70
80	ER10b	ExonRegion	0	47.22	37.16	64.88	72.96	10.44	7.01
81	E10_Da	NovelBoundary	0	21.27	10.18	13.43	32.57	11.57	20.65
82	E10b_E11a	KnownJunction	1	37.54	34.65	6.38	31.21	18.15	4.53
83	E10b_E12a	KnownJunction	0	5.97	3.26	7.06	2.66	0.00	7.22
84	ER10c	ExonRegion	1	41.09	33.08	17.05	45.40	12.38	9.26
85	ER11a	ExonRegion	0	43.49	40.46	20.39	32.08	7.37	7.12
86	E11_Da	KnownBoundary	0	56.16	52.59	43.21	33.28	3.75	16.88
87	ER11b	ExonRegion	0	76.75	36.96	61.57	83.18	6.32	5.14
88	E11_Db	NovelBoundary	0	3.19	0.00	18.96	2.23	4.08	3.61
89	E11b_E12a	KnownJunction	1	114.73	36.17	58.52	81.51	11.90	8.73
90	E12_Aa	NovelBoundary	0	16.57	6.07	6.49	2.77	0.00	0.00
91	ER12a	ExonRegion	1	90.73	28.80	57.21	74.56	5.27	11.72
92	E12_Da	KnownBoundary	1	88.88	32.90	44.06	62.47	9.32	30.31
93	ER12b	ExonRegion	1	78.87	27.15	64.98	104.17	9.32	16.70
94	E12_Db	NovelBoundary	0	0.00	0.00	3.53	9.73	0.00	9.82
95	E12b_E13a	KnownJunction	1	103.58	31.16	77.53	141.10	26.80	28.29
96	E13_Aa	NovelBoundary	0	16.15	0.00	27.32	5.55	5.16	3.78
97	ER13a	ExonRegion	1	92.87	39.02	98.77	119.59	22.58	26.87
98	E13_Da	KnownBoundary	0	89.24	59.34	90.63	91.51	68.34	56.50
99	ER13b	ExonRegion	0	85.10	51.79	70.27	106.72	37.06	21.67
100	E13_Ab	KnownBoundary	0	131.30	54.16	74.91	150.18	39.95	35.01
101	ER13c	ExonRegion	0	109.95	65.77	93.04	155.25	44.95	30.01
102	E13_Db	KnownBoundary	0	132.02	121.15	89.83	184.11	89.89	52.14
103	ER13d	ExonRegion	0	100.40	93.67	64.75	103.19	56.99	30.65
104	E13_Dc	KnownBoundary	0	62.91	64.06	36.83	41.60	19.48	26.53
105	E13c_E14a	KnownJunction	0	0.00	3.49	0.00	0.00	0.00	0.00
106	E13_Dd	KnownBoundary	0	78.75	62.21	19.87	35.99	96.72	56.17
107	ER13e	ExonRegion	0	75.83	73.06	36.12	48.11	41.06	29.62
108	ER13f	ExonRegion	0	70.23	61.60	27.56	26.39	60.09	71.80
109	E13_De	KnownBoundary	0	66.82	34.14	46.74	54.81	48.61	59.94
110	ER13g	ExonRegion	0	47.44	47.30	16.32	14.44	52.71	57.18
111	E14_Aa	NovelBoundary	0	3.49	0.00	12.18	4.84	0.00	0.00
112	ER14a	ExonRegion	0	0.02	0.00	3.91	0.00	0.00	0.00
113	E14_Da	NovelBoundary	0	6.75	0.00	11.73	2.61	0.00	0.00
114	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
115	ER15a	ExonRegion	0	1.70	1.70	1.59	0.00	1.48	2.97
116	E15_Da	NovelBoundary	0	0.00	0.00	0.00	9.35	0.00	22.58
117	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
118	ER16a	ExonRegion	0	2.31	0.00	2.41	0.60	2.97	0.02
119	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
120	E17_Aa	NovelBoundary	0	0.00	3.21	9.91	3.37	0.00	0.00
121	ER17a	ExonRegion	0	0.22	0.08	2.03	0.00	0.82	1.35
122	E17_Da	NovelBoundary	0	2.83	4.84	9.85	9.41	0.00	18.89
123	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	5.04
124	I17	Intron	0	9.87	2.64	4.46	2.56	1.33	3.72
125	I17_SR1	SilentIntronRegion	0	9.88	2.64	4.46	2.56	1.34	3.72
126	E18_Aa	NovelBoundary	0	82.67	75.09	28.92	16.04	79.16	79.42
127	ER18a	ExonRegion	0	11.10	2.91	1.14	2.21	73.44	46.42
128	E18_Da	NovelBoundary	0	19.88	24.92	18.50	0.00	33.21	63.89
129	E18a_E19a	KnownJunction	0	3.07	3.21	0.00	0.00	4.99	5.21
130	I18	Intron	0	9.63	3.58	5.84	4.59	5.32	1.50
131	I18_SR1	SilentIntronRegion	0	9.61	2.80	6.22	5.08	5.38	1.56
132	I18_AR1	ActiveIntronRegion	0	9.96	10.89	2.28	0.00	4.74	0.97
133	E19_Aa	NovelBoundary	0	38.02	21.49	10.59	9.90	26.72	0.00
134	ER19a	ExonRegion	1	10.31	9.50	1.85	0.00	0.69	8.70
135	E19a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
136	E20_Aa	NovelBoundary	0	6.69	0.00	5.81	9.68	0.00	0.00
137	ER20a	ExonRegion	0	0.33	0.00	0.00	0.00	0.10	0.13
138	E20_Da	NovelBoundary	1	0.00	0.00	0.00	15.44	0.00	0.00
139	E20a_E21a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
140	E21_Aa	NovelBoundary	0	7.23	5.57	2.85	7.88	14.07	8.73
141	ER21a	ExonRegion	0	7.11	5.14	1.34	1.99	10.63	9.11
142	E21a_E22a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
143	I21	Intron	0	12.98	7.00	6.17	1.99	7.05	6.61
144	I21_SR1	SilentIntronRegion	0	13.95	7.39	6.31	2.19	7.48	6.72
145	ER22a	ExonRegion	0	0.00	1.94	0.00	0.00	5.03	0.00
146	E22_Da	NovelBoundary	0	9.64	0.00	16.57	6.74	39.04	14.02
147	E22a_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
148	I22	Intron	0	8.88	2.42	4.68	3.90	2.04	1.96
149	I22_AR1	ActiveIntronRegion	0	9.59	3.48	3.89	7.72	3.68	4.42
150	E23_Aa	NovelBoundary	0	26.45	25.76	21.01	16.31	5.16	0.00
151	ER23a	ExonRegion	0	8.45	3.22	1.62	0.00	0.00	0.00
152	E23_Da	NovelBoundary	1	68.69	34.87	47.70	5.76	9.66	0.00
153	E23a_E24a	KnownJunction	0	0.00	0.00	3.53	0.00	0.00	0.00
154	ER24a	ExonRegion	0	9.12	8.28	7.77	2.01	0.56	0.05
155	E24a_E25a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
156	I24	Intron	0	10.24	3.16	5.11	3.47	11.64	5.36
157	I24_SR1	SilentIntronRegion	0	13.87	4.28	3.96	1.71	2.15	0.00
158	I24_AR1	ActiveIntronRegion	0	20.33	9.50	3.56	1.58	78.36	42.01
159	E25_Aa	NovelBoundary	0	17.35	3.49	9.51	18.49	4.00	9.15
160	ER25a	ExonRegion	1	14.31	4.71	8.58	3.65	27.69	79.84
161	E25_Da	NovelBoundary	1	6.57	0.00	12.35	15.01	74.08	285.96
162	E25a_E26a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
163	E26_Aa	NovelBoundary	0	3.74	0.00	5.64	6.52	75.74	156.24
164	ER26a	ExonRegion	0	3.33	2.98	24.92	24.71	3.89	10.67
165	E26_Da	NovelBoundary	0	13.38	0.00	2.79	11.85	14.57	34.67
166	E26a_E27a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
167	E27_Aa	NovelBoundary	0	17.53	11.81	15.54	2.66	32.13	14.69
168	ER27a	ExonRegion	1	16.19	2.70	7.06	1.40	10.54	5.82
169	E27_Da	NovelBoundary	0	35.07	12.37	21.40	11.36	21.06	0.00
170	E27a_E28a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
171	I27_AR1	ActiveIntronRegion	0	8.27	4.62	7.92	6.58	1.31	0.00
172	I27_SR2	SilentIntronRegion	0	4.40	2.40	3.67	5.60	0.00	0.00
173	E28_Aa	NovelBoundary	0	0.00	9.00	17.25	5.71	0.00	0.00
174	ER28a	ExonRegion	0	0.00	0.00	0.30	0.50	0.06	0.00
175	E28_Da	NovelBoundary	0	16.21	0.00	18.96	17.83	4.74	3.61
176	E28a_E29a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
177	I28	Intron	0	7.08	2.76	12.60	6.77	0.88	0.52
178	I28_AR1	ActiveIntronRegion	0	5.42	2.96	12.12	4.68	0.97	1.32
179	I28_SR2	SilentIntronRegion	0	8.15	2.63	12.91	8.12	0.83	0.00
180	E29_Aa	NovelBoundary	0	11.63	0.00	5.29	15.55	0.00	0.00
181	ER29a	ExonRegion	0	0.77	3.69	6.08	8.31	0.05	0.00
182	E29a_E30a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
183	Ix	Intron	0	11.62	5.22	8.04	3.74	6.05	4.89
184	Ix_SR1	SilentIntronRegion	0	11.63	5.22	8.05	3.75	6.05	4.89
185	ER30a	ExonRegion	0	7.19	2.66	1.86	5.45	4.57	0.00
186	E30_Da	NovelBoundary	0	6.69	3.49	9.79	6.09	0.00	0.00
187	E30a_E31a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
188	Ix	Intron	0	4.73	2.10	8.27	8.00	0.74	0.76
189	Ix_SR1	SilentIntronRegion	0	5.47	1.60	12.44	10.68	0.25	0.00
190	ER31a	ExonRegion	0	0.00	0.00	0.00	0.03	0.00	0.00
191	E31a_E32a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
192	Ix	Intron	0	8.90	6.37	12.76	7.15	0.46	0.00
193	Ix_SR1	SilentIntronRegion	0	7.34	7.24	14.41	8.87	0.57	0.00
194	Ix_AR1	ActiveIntronRegion	0	9.99	5.80	11.68	6.01	0.39	0.00
195	ER32a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
196	E32_Da	NovelBoundary	0	3.68	6.97	8.94	3.37	0.00	0.00
197	E32a_E33a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
198	E33_Aa	NovelBoundary	0	20.43	3.43	2.62	17.29	0.00	0.00
199	ER33a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
200	E33_Da	NovelBoundary	0	34.65	6.07	15.60	5.44	0.00	0.00
201	E33a_E34a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
202	E34_Aa	NovelBoundary	0	17.66	5.85	3.42	6.74	0.00	0.00
203	ER34a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
204	E34_Da	NovelBoundary	0	18.62	0.00	6.15	5.87	0.00	0.00
205	E34a_E35a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
206	E35_Aa	NovelBoundary	1	32.78	0.00	9.22	6.74	0.00	0.00
207	ER35a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
208	Ix_SR1	SilentIntronRegion	0	7.60	0.74	6.34	7.72	0.00	0.00
209	Ix_AR1	ActiveIntronRegion	0	7.67	5.94	4.95	6.33	0.00	0.00
210	ER36a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00