Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	CD55	Gene	0	17.72	21.84	10.49	18.90	28.51	38.67
2	314754	Transcript	0	0.00	1.18	0.00	0.00	2.58	1.85
3	367064	Transcript	0	0	0	0	0	0	0
4	391921	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
5	367067	Transcript	0	0	0	0	0	0	0
6	488171	Transcript	0	0.00	0.00	1.98	4.24	5.11	13.58
7	367063	Transcript	0	7.03	12.21	1.84	5.69	13.71	46.97
8	391920	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
9	367065	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
10	343420	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
11	367062	Transcript	0	0	0	0	0	0	0
12	465534	Transcript	0	0.00	0.00	0.00	0.51	0.00	0.00
13	476590	Transcript	0	0	0	0	0	0	0
14	482390	Transcript	0	0.32	0.00	0.33	1.01	0.00	0.00
15	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
16	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
17	ER1b	ExonRegion	0	0.91	0.83	1.05	0.00	0.00	0.00
18	E1_Ac	KnownBoundary	0	3.01	3.04	3.30	0.00	0.00	0.00
19	ER1c	ExonRegion	0	1.25	1.04	10.81	0.00	0.00	0.00
20	E1_Ad	KnownBoundary	0	2.71	0.00	16.11	0.00	0.00	0.00
21	ER1d	ExonRegion	0	3.35	4.29	3.59	0.00	0.00	0.00
22	E1_Ae	KnownBoundary	0	0.00	11.36	3.13	0.00	0.00	0.00
23	ER1e	ExonRegion	0	5.14	4.07	4.87	1.80	5.11	0.43
24	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
25	E1a_E3a	KnownJunction	0	7.47	6.24	14.00	3.37	24.30	4.03
26	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
27	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
28	ER2b	ExonRegion	0	0.00	0.00	0.07	0.00	0.00	0.00
29	ER3a	ExonRegion	0	20.63	20.12	18.48	26.35	16.02	9.14
30	E3a_E4a	KnownJunction	0	37.66	39.93	40.99	68.84	38.12	9.99
31	E3a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
32	ER4a	ExonRegion	1	34.74	25.21	28.44	53.95	28.52	9.26
33	ER4b	ExonRegion	0	28.88	30.39	14.04	36.35	14.56	10.16
34	E4_Ab	KnownBoundary	0	16.75	13.95	6.60	13.48	0.00	18.72
35	E4_Ac	KnownBoundary	0	13.50	22.84	5.29	26.75	41.62	24.94
36	ER4c	ExonRegion	0	22.05	27.93	13.04	32.55	16.27	22.21
37	ER4d	ExonRegion	0	22.18	34.50	24.62	46.86	16.76	17.39
38	E4c_E5a	KnownJunction	0	37.72	46.23	36.26	62.69	30.63	49.70
39	ER4e	ExonRegion	0	27.45	41.55	34.76	49.55	16.27	18.51
40	ER5a	ExonRegion	0	29.37	35.73	35.61	61.59	15.66	16.29
41	E5a_E6a	KnownJunction	0	18.32	46.06	16.51	42.90	14.32	36.35
42	ER6a	ExonRegion	0	18.12	38.43	17.74	44.52	9.04	26.69
43	ER6b	ExonRegion	0	28.65	32.26	33.47	72.05	18.28	31.67
44	E6a_E7a	KnownJunction	0	44.11	25.03	67.86	125.60	47.11	32.07
45	I6_AR1	ActiveIntronRegion	0	1.18	0.00	7.20	9.55	1.07	1.26
46	I6_SR1	SilentIntronRegion	0	0.80	0.42	1.61	7.11	0.43	2.28
47	I6_AR2	ActiveIntronRegion	0	1.15	1.36	2.59	5.95	0.00	0.00
48	I6_SR2	SilentIntronRegion	0	0.00	0.06	4.56	7.09	0.00	0.00
49	I6_AR3	ActiveIntronRegion	0	1.39	1.26	3.65	9.20	0.00	0.61
50	I6_AR4	ActiveIntronRegion	0	0.53	4.72	0.55	2.18	19.17	52.35
51	E7_Aa	NovelBoundary	0	0.00	0.00	2.96	16.15	0.00	0.00
52	ER7a	ExonRegion	0	47.25	57.83	58.05	108.59	23.12	24.70
53	E7a_E8a	KnownJunction	0	45.73	63.28	50.32	102.55	87.90	45.25
54	E8_Aa	NovelBoundary	0	0.00	6.75	9.34	3.37	5.08	5.04
55	ER8a	ExonRegion	0	63.25	79.60	77.46	134.03	46.74	49.37
56	E8_Da	KnownBoundary	0	54.11	92.52	57.21	104.12	109.29	118.29
57	E8_Db	KnownBoundary	0	0.00	9.90	3.53	8.65	0.00	0.00
58	E8b_E8b	KnownJunction	0	72.31	122.28	37.97	74.33	157.23	133.41
59	ER8b	ExonRegion	0	61.86	102.15	49.75	93.57	67.92	64.61
60	ER8c	ExonRegion	0	0.74	3.56	3.65	13.02	0.94	2.76
61	E8_Ab	KnownBoundary	0	0.00	0.00	0.00	7.61	0.00	5.12
62	ER8d	ExonRegion	0	45.02	96.66	24.52	40.07	78.20	82.26
63	E8_Dc	KnownBoundary	0	0.00	0.00	0.00	3.37	9.41	22.67
64	ER8e	ExonRegion	0	0.00	0.00	1.98	4.24	5.11	13.58
65	E9a_E10a	KnownJunction	1	13.08	46.23	0.00	5.93	41.78	84.38
66	E9a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
67	E9a_E12b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
68	E9a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
69	E9a_E15a	KnownJunction	0	17.11	41.51	16.00	0.00	101.46	124.34
70	ER9a	ExonRegion	0	32.17	83.79	14.38	7.18	78.69	96.00
71	E10_Aa	NovelBoundary	0	0.00	0.00	0.00	6.14	0.00	0.00
72	ER10a	ExonRegion	0	16.39	32.75	2.98	5.75	20.98	33.64
73	E10_Da	KnownBoundary	0	21.69	26.21	14.74	2.99	35.62	42.48
74	E10a_E15a	KnownJunction	0	0.00	2.36	0.00	0.00	5.16	3.69
75	ER10b	ExonRegion	1	7.03	12.21	1.84	5.69	13.71	46.97
76	E10_Db	NovelBoundary	0	2.77	6.92	6.77	8.26	0.00	0.00
77	ER11a	ExonRegion	0	1.28	0.00	1.32	1.31	0.00	0.00
78	E11_Da	NovelBoundary	0	0.00	0.00	0.00	8.54	0.00	0.00
79	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	2.72	0.00	0.00
80	E12_Aa	NovelBoundary	0	0.00	11.59	0.00	3.04	4.33	14.94
81	E12_Ab	NovelBoundary	1	0.00	16.70	0.00	2.56	0.00	5.04
82	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
83	ER12b	ExonRegion	0	0.00	0.00	0.00	0.00	1.24	1.30
84	E12a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
85	ER13a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
86	ER14a	ExonRegion	0	0.00	0.00	0.00	1.54	0.00	0.00
87	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
88	ER15a	ExonRegion	0	19.77	36.00	8.15	8.58	59.92	56.15
89	E15_Da	KnownBoundary	0	14.34	32.79	3.53	0.00	69.34	86.73
90	ER15b	ExonRegion	0	22.02	20.72	5.15	0.37	55.69	53.21
91	E15_Db	KnownBoundary	0	3.74	3.09	0.00	0.00	37.37	29.30
92	E15_Dc	KnownBoundary	0	19.64	0.00	8.20	0.00	28.47	23.59
93	ER15c	ExonRegion	0	29.56	12.47	8.69	2.15	47.01	49.98
94	ER15d	ExonRegion	0	38.89	38.93	4.22	4.67	91.85	125.69
95	E15_Dd	KnownBoundary	0	6.45	0.00	6.55	3.37	39.04	37.78
96	ER15e	ExonRegion	0	7.67	6.52	2.56	7.59	15.03	26.74
97	ER15f	ExonRegion	0	0.00	2.08	0.00	0.00	0.00	0.00