Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	PLXNA2	Gene	0	40.43	15.02	36.08	20.25	44.22	24.25
2	367033	Transcript	0	35.73	10.71	39.09	23.17	6.71	2.19
3	486969	Transcript	0	0.86	0.00	0.88	1.46	0.00	0.00
4	460870	Transcript	0	36.84	14.08	5.07	1.12	114.77	72.80
5	463510	Transcript	0	5.57	0.81	2.98	1.99	0.67	0.00
6	480053	Transcript	0	3.25	1.32	2.78	0.00	0.00	0.00
7	483048	Transcript	0	5.95	4.55	5.91	4.39	1.54	0.00
8	IG4_AR2	ActiveIntergenicRegion	0	10.17	1.13	0.85	0.43	14.31	3.18
9	ER1a	ExonRegion	0	0.53	0.00	0.00	0.32	0.00	0.00
10	ER1b	ExonRegion	1	7.34	2.45	24.86	4.54	0.49	0.86
11	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
12	E1a_E3a	KnownJunction	0	18.26	5.79	21.75	14.25	4.25	0.00
13	ER2a	ExonRegion	0	1.72	0.00	1.77	2.92	0.00	0.00
14	E2_Da	NovelBoundary	0	2.59	0.00	6.94	6.74	0.00	0.00
15	I2_AR2	ActiveIntronRegion	0	9.39	4.62	3.01	0.96	25.48	9.06
16	I2_SR3	SilentIntronRegion	0	14.93	8.03	2.93	0.36	36.78	24.27
17	ER3a	ExonRegion	0	33.31	15.74	43.13	26.20	8.86	0.58
18	E3_Ab	KnownBoundary	0	12.47	2.70	28.92	9.73	34.71	0.00
19	ER3b	ExonRegion	0	26.15	15.40	39.55	23.09	21.37	2.75
20	E3a_E4a	KnownJunction	0	19.94	0.00	13.83	8.70	24.47	5.21
21	I3_AR1	ActiveIntronRegion	0	6.32	0.73	2.97	1.84	14.61	0.32
22	E4_Aa	NovelBoundary	0	6.39	0.00	0.00	0.00	43.70	19.48
23	ER4a	ExonRegion	0	49.43	17.11	24.84	12.88	71.15	19.09
24	E4_Da	KnownBoundary	0	16.27	13.22	0.00	0.00	226.48	70.10
25	E4a_E5a	KnownJunction	0	10.30	11.02	18.96	10.55	0.00	0.00
26	ER4b	ExonRegion	0	36.84	14.08	5.07	1.12	114.77	72.80
27	I4_AR1	ActiveIntronRegion	0	41.55	10.96	8.64	0.65	1.59	0.00
28	I4_SR1	SilentIntronRegion	0	20.81	7.98	2.37	0.00	0.52	0.00
29	I4_AR2	ActiveIntronRegion	0	9.66	4.83	8.61	2.09	1.00	0.00
30	I4_AR5	ActiveIntronRegion	0	4.21	0.00	6.64	5.31	2.75	1.97
31	I4_AR7	ActiveIntronRegion	0	7.11	0.00	6.20	7.75	0.00	0.00
32	I4_AR8	ActiveIntronRegion	0	4.22	0.00	6.52	5.14	0.00	0.00
33	I4_AR10	ActiveIntronRegion	0	0.00	0.00	15.03	2.15	0.00	0.00
34	I4_AR11	ActiveIntronRegion	0	16.82	7.11	11.36	8.58	16.99	4.02
35	I4_SR6	SilentIntronRegion	0	2.81	0.95	9.27	4.35	0.25	1.19
36	I4_AR15	ActiveIntronRegion	0	1.70	0.00	3.57	0.00	10.73	0.00
37	I4_AR16	ActiveIntronRegion	0	4.89	1.93	1.01	1.00	26.81	33.03
38	I4_SR9	SilentIntronRegion	0	1.40	0.00	15.26	2.33	2.16	0.00
39	I4_AR19	ActiveIntronRegion	0	14.58	9.74	6.65	7.17	74.41	42.26
40	I4_AR20	ActiveIntronRegion	0	18.08	16.36	6.61	3.47	162.58	166.81
41	ER5a	ExonRegion	0	16.42	7.25	32.97	9.96	0.00	0.00
42	E5a_E6a	KnownJunction	0	23.14	13.39	13.49	8.81	0.00	0.00
43	I5_AR1	ActiveIntronRegion	0	2.45	1.72	6.34	4.34	70.35	32.41
44	ER6a	ExonRegion	0	20.03	9.15	18.35	16.36	0.00	0.00
45	E6a_E7a	KnownJunction	1	22.17	0.00	32.39	17.78	0.00	0.00
46	ER7a	ExonRegion	0	21.96	13.25	32.10	19.16	0.00	0.00
47	E7a_E8a	KnownJunction	0	26.03	11.19	46.17	17.24	0.00	0.00
48	ER8a	ExonRegion	0	33.70	10.93	45.61	28.31	0.00	0.00
49	E8a_E9a	KnownJunction	0	30.67	6.75	53.68	39.64	0.00	0.00
50	ER9a	ExonRegion	0	30.76	18.36	64.19	31.85	0.71	0.00
51	E9_Da	NovelBoundary	0	0.00	0.00	0.00	6.36	5.16	0.00
52	E9a_E10a	KnownJunction	1	32.18	6.41	83.85	21.91	5.16	0.00
53	ER10a	ExonRegion	0	33.40	7.93	56.30	41.04	1.79	0.00
54	E10a_E11a	KnownJunction	0	17.53	0.00	14.97	7.39	0.00	0.00
55	I10_AR1	ActiveIntronRegion	0	3.74	0.00	8.05	4.16	65.21	59.92
56	ER11a	ExonRegion	0	20.53	6.18	36.68	17.56	0.68	0.00
57	E11a_E12a	KnownJunction	1	23.26	0.00	24.02	3.04	0.00	0.00
58	ER12a	ExonRegion	0	25.10	7.09	48.98	19.61	0.00	0.00
59	E12a_E13a	KnownJunction	0	8.98	6.24	32.50	21.59	0.00	0.00
60	ER13a	ExonRegion	0	19.11	4.48	25.52	7.61	0.00	0.00
61	E13a_E14a	KnownJunction	0	24.95	7.82	16.91	3.32	0.00	0.00
62	I13_SR1	SilentIntronRegion	0	1.44	1.30	9.50	4.43	1.87	0.98
63	ER14a	ExonRegion	0	22.38	6.64	33.23	14.54	0.95	0.00
64	E14a_E15a	KnownJunction	0	14.34	8.27	2.73	6.63	0.00	0.00
65	I14_SR1	SilentIntronRegion	0	1.99	0.33	7.56	5.22	0.03	0.03
66	E15_Aa	NovelBoundary	0	7.47	6.97	4.84	9.35	0.00	0.00
67	ER15a	ExonRegion	1	31.87	4.82	26.22	8.00	1.10	0.00
68	E15_Da	NovelBoundary	0	3.68	0.00	0.00	10.00	0.00	0.00
69	E15a_E16a	KnownJunction	0	26.57	11.14	23.68	14.79	0.00	0.00
70	ER16a	ExonRegion	0	33.24	10.46	20.87	14.20	1.00	1.03
71	E16a_E17a	KnownJunction	0	44.47	20.98	23.28	23.43	0.00	0.00
72	E17_Aa	NovelBoundary	0	3.74	5.29	0.00	0.00	0.00	0.00
73	ER17a	ExonRegion	0	40.59	11.22	39.62	19.43	0.00	0.35
74	E17_Da	NovelBoundary	0	0.00	6.97	3.53	3.37	0.00	0.00
75	E17a_E18a	KnownJunction	0	47.42	18.28	37.17	31.26	0.00	5.21
76	ER18a	ExonRegion	0	47.64	11.14	59.77	39.56	0.00	0.87
77	E18a_E19a	KnownJunction	0	42.12	12.49	105.65	60.46	0.00	0.00
78	ER19a	ExonRegion	0	38.25	7.63	65.99	36.69	0.00	0.00
79	E19a_E20a	KnownJunction	1	29.77	0.00	36.20	20.82	0.00	0.00
80	ER20a	ExonRegion	1	30.91	2.90	41.56	16.55	0.00	0.00
81	E20a_E21a	KnownJunction	0	28.68	6.36	19.58	12.78	0.00	0.00
82	ER21a	ExonRegion	1	33.99	2.93	32.23	18.04	0.00	0.00
83	E21a_E22a	KnownJunction	1	50.49	0.00	50.21	43.77	0.00	0.00
84	ER22a	ExonRegion	1	33.63	4.01	32.48	29.29	0.00	0.00
85	E22a_E23a	KnownJunction	1	63.45	3.32	96.09	82.05	0.00	0.00
86	ER23a	ExonRegion	0	49.49	14.46	73.45	48.54	0.01	0.00
87	E23a_E24b	KnownJunction	0	37.78	13.22	28.06	13.38	0.00	0.00
88	E24_Aa	NovelBoundary	0	3.25	3.32	11.67	6.52	0.00	0.00
89	ER24a	ExonRegion	0	5.57	0.81	2.98	1.99	0.67	0.00
90	E24_Ab	KnownBoundary	0	5.66	0.00	3.53	3.26	0.00	0.00
91	ER24b	ExonRegion	0	24.60	7.05	30.48	23.14	1.81	0.00
92	E24_Da	NovelBoundary	0	0.00	5.51	0.00	3.37	0.00	0.00
93	E24a_E25a	KnownJunction	0	13.68	8.77	27.44	11.31	0.00	0.00
94	ER25a	ExonRegion	0	46.75	9.72	48.86	25.91	8.56	0.00
95	E25a_E26a	KnownJunction	0	63.93	11.42	36.43	27.19	12.90	0.00
96	ER26a	ExonRegion	0	41.36	9.27	39.47	23.06	6.72	0.00
97	E26_Da	KnownBoundary	0	69.78	25.59	103.09	49.86	30.88	0.00
98	ER26b	ExonRegion	0	49.33	11.91	64.78	31.53	17.35	3.86
99	E26_Db	NovelBoundary	0	3.74	0.00	5.92	3.26	38.12	0.00
100	E26b_E27a	KnownJunction	1	83.76	0.00	31.88	9.68	37.96	14.86
101	ER27a	ExonRegion	0	60.82	14.50	29.41	15.49	18.13	10.47
102	E27_Da	NovelBoundary	0	0.00	0.00	2.90	6.47	8.16	26.28
103	E27a_E28a	KnownJunction	0	44.83	19.46	19.18	21.37	28.88	5.04
104	ER28a	ExonRegion	0	45.71	14.46	27.96	16.50	24.15	2.39
105	E28a_E29a	KnownJunction	1	52.78	8.10	20.66	21.97	12.32	4.95
106	ER29a	ExonRegion	0	52.30	27.48	35.16	29.99	24.79	8.58
107	E29_Da	NovelBoundary	0	9.40	2.76	3.36	7.83	115.28	42.31
108	E29a_E30a	KnownJunction	0	56.82	43.42	40.59	18.60	27.55	9.32
109	ER30a	ExonRegion	0	60.97	38.64	47.57	37.37	20.51	4.29
110	E30_Ab	KnownBoundary	1	82.61	7.82	64.10	47.20	42.28	8.82
111	ER30b	ExonRegion	0	76.85	23.84	74.00	56.39	23.85	5.47
112	E30a_E31a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
113	E30a_E32b	KnownJunction	0	91.47	32.45	106.68	66.77	36.04	8.82
114	ER31a	ExonRegion	0	6.49	2.64	5.56	0.00	0.00	0.00
115	E31_Da	NovelBoundary	0	3.07	0.00	13.09	0.00	0.00	0.00
116	I31_AR1	ActiveIntronRegion	0	3.55	0.87	8.92	2.15	0.00	0.00
117	ER32a	ExonRegion	0	5.95	4.55	5.91	4.39	1.54	0.00
118	E32_Ab	KnownBoundary	0	16.75	17.10	10.13	5.22	23.06	0.00
119	ER32b	ExonRegion	0	82.13	22.12	57.79	39.40	33.92	10.11
120	E32a_E33a	KnownJunction	0	72.55	20.70	71.21	30.88	80.41	37.19
121	ER33a	ExonRegion	0	85.47	32.36	32.54	10.46	51.07	14.33
122	E33a_E34a	KnownJunction	0	123.46	34.53	29.32	6.36	102.63	58.01
123	ER34a	ExonRegion	0	77.60	40.68	68.95	38.92	155.08	131.56
124	E34_Da	KnownBoundary	0	17.29	0.00	28.75	15.50	0.00	0.00
125	ER34b	ExonRegion	0	55.67	18.19	37.43	20.91	83.47	35.29