Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	NPHP4	Gene	0	18.28	5.78	5.60	3.75	18.35	6.63
2	489180	Transcript	0	0.57	0.00	0.52	0.13	0.00	0.00
3	378162	Transcript	0	0	0	0	0	0	0
4	378169	Transcript	0	0	0	0	0	0	0
5	378156	Transcript	0	21.28	13.53	3.28	5.22	0.00	2.41
6	478423	Transcript	0	0.00	0.00	1.74	0.00	0.00	0.00
7	378160	Transcript	0	0	0	0	0	0	0
8	466897	Transcript	0	1.97	0.83	1.46	0.95	1.15	0.22
9	470763	Transcript	0	3.38	0.88	2.11	1.50	0.08	0.00
10	468253	Transcript	0	5.37	1.25	0.34	0.97	0.00	0.00
11	378161	Transcript	0	5.72	0.52	1.87	0.52	1.21	0.00
12	471508	Transcript	0	0	0	0	0	0	0
13	460696	Transcript	0	0	0	0	0	0	0
14	460414	Transcript	0	0	0	0	0	0	0
15	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
16	ER1b	ExonRegion	0	0.04	0.00	0.28	0.00	0.00	0.00
17	E1_Ac	KnownBoundary	0	2.77	2.36	0.00	0.00	0.00	0.00
18	ER1c	ExonRegion	0	2.72	1.75	4.51	0.91	0.00	0.00
19	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
20	E1a_E4a	KnownJunction	0	0.00	0.00	3.47	0.00	0.00	0.00
21	E2_Aa	NovelBoundary	0	0.00	5.79	8.48	0.00	0.00	0.00
22	ER2a	ExonRegion	0	19.88	7.10	14.03	14.63	0.00	0.00
23	E2_Da	NovelBoundary	0	0.00	0.00	26.64	0.00	0.00	0.00
24	E2a_E3a	KnownJunction	0	19.94	2.98	14.86	18.27	0.00	0.00
25	ER3a	ExonRegion	0	34.50	10.92	24.77	21.44	0.00	0.00
26	E3_Da	NovelBoundary	0	12.77	6.97	0.00	0.00	0.00	0.00
27	E3a_E4a	KnownJunction	1	63.75	2.76	54.42	48.17	0.00	0.00
28	ER4a	ExonRegion	0	42.43	14.25	39.72	23.04	0.79	0.00
29	E4a_E5a	KnownJunction	0	54.89	15.86	31.20	29.42	0.00	0.00
30	E4a_E6a	NovelJunction	0	11.03	0.00	0.00	2.56	0.00	0.00
31	ER5a	ExonRegion	0	54.96	24.16	38.44	30.16	0.00	0.00
32	E5_Da	NovelBoundary	0	2.77	11.25	0.00	2.45	0.00	0.00
33	E5a_E6a	KnownJunction	0	60.26	34.14	40.13	35.23	0.00	0.00
34	E6_Aa	NovelBoundary	0	8.62	0.00	9.73	0.00	0.00	0.00
35	ER6a	ExonRegion	0	30.18	17.05	22.77	20.22	1.18	0.00
36	E6_Ab	KnownBoundary	0	46.58	9.62	14.97	11.26	0.00	0.00
37	ER6b	ExonRegion	0	40.64	9.40	8.09	9.69	1.18	0.00
38	E6a_E7a	KnownJunction	0	44.05	6.64	8.25	6.25	4.74	0.00
39	ER7a	ExonRegion	0	23.18	8.55	7.31	3.19	0.66	0.00
40	E7a_E8a	KnownJunction	0	38.87	16.99	5.64	0.00	0.00	0.00
41	ER8a	ExonRegion	0	23.89	11.23	7.70	4.63	1.87	0.00
42	E8a_E9a	KnownJunction	0	36.70	16.99	15.14	5.65	5.16	0.00
43	ER9a	ExonRegion	0	34.65	10.70	16.49	4.78	1.65	0.00
44	E9a_E10a	KnownJunction	1	55.13	2.53	18.79	11.85	0.00	0.00
45	ER10a	ExonRegion	1	47.63	5.96	20.25	14.13	0.33	0.00
46	E10a_E11a	KnownJunction	0	33.68	8.89	3.13	2.83	5.16	0.00
47	ER11a	ExonRegion	0	42.09	8.56	24.23	10.24	0.56	0.00
48	E11_Da	NovelBoundary	0	3.49	0.00	0.00	6.42	0.00	0.00
49	E11a_E12a	KnownJunction	0	11.81	6.19	0.00	3.10	0.00	0.00
50	E11a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
51	ER12a	ExonRegion	0	23.84	6.00	4.63	2.92	0.00	0.00
52	E12a_E13a	KnownJunction	0	26.33	7.65	2.50	3.37	0.00	0.00
53	ER13a	ExonRegion	0	21.90	8.64	3.96	4.99	0.00	0.00
54	E13a_E14a	KnownJunction	0	0.00	2.53	3.53	0.00	0.00	0.00
55	E13a_E14b	KnownJunction	0	17.29	21.94	0.00	3.26	0.00	0.00
56	ER14a	ExonRegion	0	5.28	5.19	2.17	3.77	0.00	0.00
57	ER14b	ExonRegion	0	28.62	15.82	11.45	12.26	0.00	0.00
58	E14_Da	NovelBoundary	0	0.00	9.11	6.43	0.00	0.00	0.00
59	E14a_E15a	KnownJunction	0	27.84	17.66	17.48	11.20	0.00	0.00
60	E15_Aa	NovelBoundary	0	0.00	5.51	3.07	0.00	0.00	0.00
61	ER15a	ExonRegion	0	33.54	12.43	20.53	22.70	0.00	0.00
62	E15_Ab	KnownBoundary	0	49.35	12.82	15.54	12.40	0.00	0.00
63	ER15b	ExonRegion	0	33.32	5.52	9.91	5.05	0.00	0.00
64	E15a_E16a	KnownJunction	0	37.84	5.34	6.32	0.00	0.00	0.00
65	ER16a	ExonRegion	0	29.41	9.12	14.92	13.69	0.73	0.00
66	E16a_E17a	KnownJunction	0	23.32	3.49	8.99	6.47	0.00	0.00
67	ER17a	ExonRegion	0	22.01	3.65	2.97	3.25	0.85	0.00
68	E17_Da	NovelBoundary	0	3.25	0.00	0.00	5.87	0.00	0.00
69	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
70	E17a_E19a	KnownJunction	0	12.96	15.30	3.53	0.00	0.00	0.00
71	ER18a	ExonRegion	0	3.90	0.00	1.58	0.00	0.00	0.00
72	E18_Da	KnownBoundary	0	7.29	0.00	3.13	0.00	0.00	0.00
73	ER18b	ExonRegion	0	2.86	0.00	3.76	0.00	0.00	0.00
74	E18b_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
75	E19_Aa	NovelBoundary	0	9.52	0.00	0.00	0.00	0.00	0.00
76	ER19a	ExonRegion	0	24.04	5.11	3.66	0.01	3.05	0.77
77	E19a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
78	E19a_E21b	KnownJunction	0	25.73	5.29	13.15	3.10	0.00	0.00
79	ER20a	ExonRegion	0	5.04	3.30	2.08	3.78	4.61	0.88
80	E20_Da	NovelBoundary	0	14.70	0.00	5.98	0.00	0.00	0.00
81	E21_Aa	NovelBoundary	0	14.28	0.00	5.29	0.00	0.00	0.00
82	ER21a	ExonRegion	0	6.07	1.76	3.42	2.22	0.16	0.00
83	E21_Ab	KnownBoundary	0	6.75	0.00	5.46	3.26	0.00	0.00
84	ER21b	ExonRegion	0	37.90	9.89	9.56	4.03	1.07	1.98
85	E21a_E22a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
86	E21a_E23a	KnownJunction	1	36.15	2.53	9.85	3.37	3.75	4.11
87	ER22a	ExonRegion	0	3.33	0.00	1.29	1.28	0.00	0.00
88	E22_Da	KnownBoundary	0	6.81	0.00	0.00	0.00	0.00	0.00
89	ER22b	ExonRegion	0	3.36	0.00	4.15	1.03	0.00	0.00
90	E22b_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
91	ER23a	ExonRegion	0	27.31	13.40	6.09	3.51	1.33	0.16
92	E23_Da	KnownBoundary	0	0.00	0.00	0.00	3.10	0.00	0.00
93	E23a_E24a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
94	E23a_E26a	KnownJunction	0	32.78	25.76	6.43	9.19	0.00	3.53
95	E23_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
96	E23b_E26b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
97	ER23b	ExonRegion	0	2.11	0.00	0.00	0.00	0.00	0.00
98	ER23c	ExonRegion	0	0.70	0.00	0.79	0.79	0.00	0.00
99	ER24a	ExonRegion	0	1.16	0.00	0.00	0.00	0.00	0.00
100	E24a_E25a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
101	ER25a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
102	E25a_E26b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
103	ER26a	ExonRegion	0	28.96	14.84	3.41	6.46	0.00	0.00
104	ER26b	ExonRegion	0	46.94	14.37	3.87	4.79	1.45	0.00
105	E26_Da	NovelBoundary	0	12.77	6.81	0.00	2.83	0.00	0.00
106	E26a_E27a	KnownJunction	1	52.06	0.00	5.69	9.19	4.66	0.00
107	E27_Aa	NovelBoundary	0	0.00	0.00	8.99	0.00	0.00	0.00
108	ER27a	ExonRegion	1	52.30	8.77	6.58	2.10	1.23	0.00
109	E27a_E28b	KnownJunction	0	47.48	8.44	10.99	0.00	0.00	0.00
110	ER28a	ExonRegion	0	5.37	1.25	0.34	0.97	0.00	0.00
111	E28_Ab	KnownBoundary	0	6.51	0.00	0.00	0.00	0.00	0.00
112	ER28b	ExonRegion	1	45.02	5.73	3.93	5.97	0.00	1.09
113	E28a_E29b	KnownJunction	1	61.10	5.40	0.00	0.00	0.00	4.87
114	ER29a	ExonRegion	0	2.43	1.00	0.70	1.03	0.00	0.00
115	E29_Ab	KnownBoundary	0	2.71	0.00	0.00	0.00	0.00	0.00
116	ER29b	ExonRegion	0	39.80	6.66	11.14	1.01	1.15	0.64
117	E29_Da	NovelBoundary	0	10.30	0.00	0.00	0.00	0.00	0.00
118	E29a_E30b	KnownJunction	1	49.47	0.00	3.13	0.00	8.91	4.95
119	E30_Aa	NovelBoundary	0	2.59	10.29	2.73	0.00	0.00	0.00
120	ER30a	ExonRegion	0	0.77	1.48	0.50	0.91	0.00	0.00
121	E30_Ab	KnownBoundary	0	0.00	0.00	3.53	0.00	0.00	0.00
122	ER30b	ExonRegion	1	44.02	5.41	6.98	1.11	1.81	1.85
123	E30_Da	KnownBoundary	0	50.49	9.28	6.43	2.61	4.16	3.78
124	ER30c	ExonRegion	0	36.66	10.39	5.93	2.15	4.62	1.57
125	E30b_E31a	KnownJunction	0	29.89	8.44	3.36	0.00	12.74	5.12
126	ER31a	ExonRegion	0	33.31	11.89	6.52	1.33	2.73	1.01
127	E31_Da	KnownBoundary	0	14.76	0.00	0.00	3.26	0.00	0.00
128	E31a_E31b	KnownJunction	0	30.25	11.76	12.01	3.32	0.00	0.00
129	ER31b	ExonRegion	0	7.85	2.51	2.91	0.74	0.00	0.00
130	E31_Db	KnownBoundary	0	3.74	0.00	2.79	0.00	0.00	0.00
131	ER31c	ExonRegion	0	10.03	2.42	1.82	0.72	0.01	0.00
132	E31_Ab	KnownBoundary	0	16.63	0.00	0.00	0.00	0.00	0.00
133	ER31d	ExonRegion	0	27.78	12.93	5.63	3.10	2.21	1.62
134	E31_Dc	KnownBoundary	0	20.55	3.04	3.42	2.77	0.00	0.00
135	E31c_E31d	KnownJunction	0	38.26	17.83	15.48	0.00	0.00	0.00
136	ER31e	ExonRegion	0	10.19	1.40	1.76	2.17	0.66	0.00
137	E31_Ac	KnownBoundary	0	25.97	13.67	9.11	3.37	0.00	0.00
138	ER31f	ExonRegion	1	16.31	1.61	5.18	0.58	1.07	0.00
139	E31_Ad	KnownBoundary	0	10.54	0.00	6.83	5.65	4.08	0.00
140	ER31g	ExonRegion	0	26.90	5.73	8.19	3.06	3.90	0.79
141	E31_Dd	KnownBoundary	0	5.84	0.00	0.00	0.00	0.00	0.00
142	E31d_E31e	KnownJunction	0	29.53	15.19	2.45	2.39	23.89	0.00
143	ER31h	ExonRegion	0	9.02	0.05	3.03	0.01	2.42	0.00
144	E31_Ae	KnownBoundary	0	8.74	0.00	5.69	0.00	8.66	0.00
145	ER31i	ExonRegion	0	56.77	27.42	11.33	6.04	30.32	5.36
146	E31_De	KnownBoundary	0	3.68	0.00	0.00	0.00	0.00	3.69
147	E31e_E31f	KnownJunction	0	68.69	30.20	12.92	2.88	27.63	5.04
148	ER31j	ExonRegion	0	17.76	6.31	1.51	0.68	8.62	1.23
149	E31_Af	KnownBoundary	0	15.79	24.07	3.30	0.00	80.74	19.23
150	ER31k	ExonRegion	0	75.63	32.76	8.14	1.12	67.64	18.26
151	E31_Df	KnownBoundary	0	63.15	12.99	6.09	0.00	82.74	17.30
152	ER31l	ExonRegion	0	67.25	23.82	2.24	3.75	528.32	201.70
153	ER31m	ExonRegion	1	20.27	0.00	0.00	0.86	261.07	106.26
154	ER31n	ExonRegion	1	14.78	0.00	0.00	0.00	17.18	10.18
155	ER31o	ExonRegion	0	2.11	0.00	0.00	0.00	0.00	3.70