Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	DLGAP1	Gene	0	31.98	12.08	87.48	33.82	23.32	7.75
2	315677	Transcript	0	4.05	4.92	15.24	6.21	1.27	0.00
3	498188	Transcript	0	3.50	4.10	3.11	2.56	7.28	5.26
4	478161	Transcript	0	4.57	2.18	77.02	12.76	1.65	1.43
5	400150	Transcript	0	29.74	10.29	146.67	66.02	0.00	0.00
6	400155	Transcript	0	0	0	0	0	0	0
7	400149	Transcript	0	3.12	0.00	44.40	12.86	0.00	0.00
8	400147	Transcript	0	4.16	0.00	44.90	10.90	0.22	0.00
9	484845	Transcript	0	6.88	1.36	12.08	4.23	6.68	0.16
10	400145	Transcript	0	72.86	15.78	24.41	13.66	285.40	83.90
11	485480	Transcript	0	19.83	5.23	37.66	16.58	13.75	13.72
12	486430	Transcript	0	7.68	1.04	29.24	9.87	0.75	0.00
13	ER1a	ExonRegion	0	4.05	4.92	15.24	6.21	1.27	0.00
14	E1_Ab	KnownBoundary	0	10.91	12.77	34.44	19.85	5.16	0.00
15	ER1b	ExonRegion	0	15.07	7.00	25.98	16.87	1.92	0.22
16	E1_Da	NovelBoundary	0	5.84	0.00	6.38	0.00	25.89	0.00
17	E1a_E5a	KnownJunction	0	53.75	17.10	129.22	87.92	0.00	5.12
18	I1_SR1	SilentIntronRegion	0	3.60	0.60	8.71	2.42	78.73	30.88
19	I1_AR1	ActiveIntronRegion	0	3.07	2.34	9.45	5.58	150.74	69.52
20	ER2a	ExonRegion	1	3.58	0.37	51.44	7.71	0.00	0.15
21	E2a_E5a	KnownJunction	1	6.15	2.98	211.08	23.00	0.00	0.00
22	E3_Aa	NovelBoundary	0	0.00	6.97	48.90	19.79	4.33	0.00
23	ER3a	ExonRegion	0	5.74	6.01	50.77	13.07	0.00	0.00
24	E3_Ab	KnownBoundary	0	3.43	0.00	9.79	9.73	0.00	0.00
25	E3_Ac	KnownBoundary	0	16.45	20.59	174.53	33.82	0.00	0.00
26	ER3b	ExonRegion	0	12.67	20.78	167.28	34.47	0.00	0.00
27	ER3c	ExonRegion	0	17.98	24.50	196.39	37.50	1.58	2.07
28	E3a_E5a	KnownJunction	0	14.46	9.06	203.68	39.58	9.41	15.20
29	E3b_E5a	KnownJunction	0	0.00	0.00	64.67	16.75	0.00	0.00
30	ER3d	ExonRegion	0	5.63	0.00	53.23	15.08	0.00	0.00
31	I3_AR1	ActiveIntronRegion	0	8.43	2.79	21.02	9.27	237.93	70.64
32	I3_AR2	ActiveIntronRegion	1	22.48	0.00	20.54	12.93	306.35	303.09
33	ER4a	ExonRegion	0	4.16	0.00	44.90	10.90	0.22	0.00
34	E4_Ab	KnownBoundary	0	3.43	0.00	13.55	5.98	0.00	0.00
35	E4_Ac	KnownBoundary	1	28.44	0.00	246.26	63.94	5.16	0.00
36	ER4b	ExonRegion	1	17.50	0.00	172.82	48.23	1.81	0.00
37	ER4c	ExonRegion	0	20.75	23.05	442.34	140.23	1.16	1.71
38	E4a_E5a	KnownJunction	0	21.81	41.90	496.79	170.02	0.00	5.12
39	I4_SR1	SilentIntronRegion	0	0.00	0.00	20.29	3.10	0.43	0.00
40	I4_AR1	ActiveIntronRegion	1	0.00	0.00	48.88	6.46	0.00	0.00
41	I4_AR2	ActiveIntronRegion	0	0.39	0.00	37.38	6.55	0.00	0.00
42	I4_AR3	ActiveIntronRegion	1	2.11	0.00	28.50	2.15	0.00	0.00
43	I4_AR4	ActiveIntronRegion	0	0.97	0.00	29.32	9.30	0.67	0.82
44	I4_SR2	SilentIntronRegion	0	1.71	0.58	19.62	3.95	2.25	0.00
45	I4_SR4	SilentIntronRegion	0	9.75	1.73	16.97	4.96	5.07	3.59
46	I4_AR7	ActiveIntronRegion	0	10.03	0.71	11.38	0.79	30.74	27.72
47	I4_AR9	ActiveIntronRegion	0	8.67	2.84	14.27	1.19	0.00	0.00
48	I4_SR6	SilentIntronRegion	0	11.43	2.16	11.78	3.46	5.73	3.36
49	E5_Aa	NovelBoundary	0	107.26	35.72	27.15	3.04	18.06	0.00
50	ER5a	ExonRegion	0	138.45	82.86	735.33	285.68	18.74	9.02
51	E5_Da	NovelBoundary	0	42.84	16.03	23.11	19.14	7.57	0.00
52	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
53	E5a_E7b	KnownJunction	0	129.13	46.06	483.58	214.72	34.88	0.00
54	I5	Intron	0	12.80	2.01	28.04	8.42	106.17	31.60
55	I5_SR1	SilentIntronRegion	0	12.81	2.01	28.06	8.42	106.22	31.61
56	I5	Intron	0	6.39	1.85	22.82	8.76	22.15	7.62
57	I5_SR1	SilentIntronRegion	0	2.92	2.01	29.56	11.26	11.43	3.27
58	I5_AR1	ActiveIntronRegion	0	3.94	0.78	32.30	11.08	15.71	2.66
59	I5_SR2	SilentIntronRegion	0	6.72	2.52	36.11	15.29	41.63	16.26
60	I5_AR2	ActiveIntronRegion	0	2.82	0.42	20.32	5.99	296.57	62.55
61	I5_AR3	ActiveIntronRegion	0	3.74	0.00	23.40	7.73	393.08	77.41
62	I5_SR3	SilentIntronRegion	0	8.07	1.84	18.16	7.30	15.81	7.59
63	I5_AR4	ActiveIntronRegion	0	14.23	2.45	15.20	6.17	2.11	0.07
64	I5_SR4	SilentIntronRegion	0	8.66	1.65	19.00	5.46	4.03	2.41
65	I5_AR5	ActiveIntronRegion	1	3.71	1.90	23.19	2.54	0.00	0.00
66	E6_Aa	NovelBoundary	1	30.07	2.87	53.45	9.13	28.63	0.00
67	ER6a	ExonRegion	0	13.76	2.73	24.16	8.45	13.35	0.31
68	E6_Da	NovelBoundary	0	8.13	2.42	23.85	6.09	81.49	0.00
69	I6	Intron	0	19.75	4.37	12.24	5.86	22.42	8.03
70	I6_SR1	SilentIntronRegion	0	44.27	6.64	12.02	4.73	99.38	27.67
71	I6_AR1	ActiveIntronRegion	1	41.25	2.64	9.98	5.39	0.00	0.00
72	I6_SR2	SilentIntronRegion	0	15.98	0.82	16.79	6.73	0.00	0.99
73	I6_AR2	ActiveIntronRegion	0	22.76	10.22	41.49	17.92	0.00	0.00
74	I6_SR3	SilentIntronRegion	0	12.14	4.27	11.72	6.01	6.28	4.24
75	E7_Aa	NovelBoundary	0	6.75	0.00	2.56	0.00	14.73	0.00
76	E7_Ab	NovelBoundary	0	2.95	0.00	2.39	0.00	20.64	0.00
77	ER7a	ExonRegion	0	26.92	8.83	97.76	43.08	4.07	0.00
78	ER7b	ExonRegion	0	83.18	21.23	201.40	75.15	31.70	4.77
79	E7_Da	NovelBoundary	1	34.95	0.00	0.00	2.72	37.29	5.21
80	E7a_E8b	KnownJunction	1	89.06	9.62	162.75	45.02	4.49	0.00
81	ER8a	ExonRegion	0	19.53	3.12	34.22	12.39	2.26	0.00
82	ER8b	ExonRegion	0	58.14	27.99	169.34	68.59	1.97	2.95
83	E8_Da	NovelBoundary	0	6.21	2.47	35.64	11.47	0.00	0.00
84	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
85	E8a_E10a	KnownJunction	0	2.83	3.49	0.00	2.50	0.00	0.00
86	E8a_E11a	KnownJunction	0	0.00	2.98	0.00	0.00	0.00	0.00
87	E8a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
88	E8a_E14a	KnownJunction	0	27.42	5.40	59.77	26.10	0.00	0.00
89	I8	Intron	0	3.04	1.80	33.18	14.12	0.26	0.00
90	I8_SR1	SilentIntronRegion	0	3.05	1.80	33.24	14.15	0.26	0.00
91	E9_Aa	NovelBoundary	0	2.53	0.00	65.92	21.69	0.00	0.00
92	ER9a	ExonRegion	0	3.52	0.00	53.51	17.23	0.00	0.00
93	E9_Da	NovelBoundary	0	10.18	0.00	43.72	5.38	0.00	0.00
94	I9	Intron	0	10.80	2.36	39.99	16.74	2.40	0.79
95	I9_SR1	SilentIntronRegion	0	7.33	1.51	37.93	15.43	2.97	0.97
96	I9_AR1	ActiveIntronRegion	0	26.64	6.20	52.72	23.98	0.19	0.13
97	E10_Aa	NovelBoundary	1	6.57	2.92	128.14	17.83	0.00	5.21
98	ER10a	ExonRegion	0	5.73	1.87	45.54	17.83	6.62	5.59
99	E10_Da	NovelBoundary	0	6.99	2.87	53.00	14.14	57.27	0.00
100	I10	Intron	0	34.09	8.19	37.86	12.28	64.31	12.08
101	I10_SR1	SilentIntronRegion	0	32.55	5.87	41.38	9.94	5.59	0.17
102	I10_AR1	ActiveIntronRegion	0	60.08	11.41	35.66	12.14	401.39	76.01
103	I10_SR2	SilentIntronRegion	0	29.48	8.54	28.71	5.53	75.42	18.07
104	I10_AR2	ActiveIntronRegion	0	78.44	19.03	40.13	21.34	144.05	23.44
105	I10_SR3	SilentIntronRegion	0	46.84	13.14	51.12	15.46	23.89	4.30
106	I10_AR3	ActiveIntronRegion	0	15.57	1.31	46.29	18.30	0.00	0.00
107	I10_SR4	SilentIntronRegion	0	15.36	4.38	29.41	11.35	2.24	0.30
108	E11_Aa	NovelBoundary	0	12.47	0.00	5.07	7.78	23.22	31.82
109	ER11a	ExonRegion	0	6.99	5.22	6.22	5.12	14.57	10.52
110	E11_Da	NovelBoundary	0	6.03	0.00	3.30	0.00	51.19	50.29
111	I11	Intron	0	24.07	4.55	27.29	9.50	54.72	31.33
112	I11_SR1	SilentIntronRegion	0	19.29	4.53	27.63	8.05	61.94	6.73
113	I11_AR1	ActiveIntronRegion	0	20.54	3.18	48.87	8.78	474.31	189.54
114	I11_AR2	ActiveIntronRegion	0	51.89	9.68	90.72	22.16	25.92	32.65
115	I11_SR2	SilentIntronRegion	0	31.92	6.26	23.68	9.29	53.43	84.89
116	I11_AR3	ActiveIntronRegion	0	23.77	2.76	51.22	30.93	4.46	1.69
117	I11_SR3	SilentIntronRegion	0	21.56	3.95	23.78	8.46	40.47	14.78
118	E12_Aa	NovelBoundary	1	35.97	3.49	16.68	3.37	61.84	17.80
119	ER12a	ExonRegion	0	32.56	6.85	15.21	6.66	37.19	41.17
120	E12_Da	NovelBoundary	0	39.77	41.00	23.40	7.23	74.58	21.49
121	I12	Intron	0	14.24	3.43	19.83	7.39	16.37	8.45
122	I12_SR1	SilentIntronRegion	0	18.42	4.94	14.81	5.99	18.70	14.73
123	I12_AR1	ActiveIntronRegion	0	8.82	6.37	33.44	7.98	0.00	0.00
124	I12_SR2	SilentIntronRegion	0	10.98	2.79	18.56	8.30	36.14	9.58
125	I12_AR2	ActiveIntronRegion	0	5.63	0.00	21.58	6.88	0.63	0.00
126	I12_SR3	SilentIntronRegion	0	11.28	1.39	27.50	10.46	3.63	1.76
127	I12_AR4	ActiveIntronRegion	1	22.13	0.38	28.82	6.41	3.50	0.00
128	I12_SR4	SilentIntronRegion	0	14.81	4.21	19.81	6.68	17.66	6.80
129	E13a_E14a	KnownJunction	0	53.75	14.57	242.56	118.97	0.00	0.00
130	E13a_E14b	KnownJunction	0	3.74	0.00	15.31	6.74	0.00	0.00
131	ER13a	ExonRegion	1	49.90	9.28	161.56	83.73	0.30	0.00
132	I13	Intron	0	23.03	5.70	26.06	9.93	11.43	4.83
133	I13_AR1	ActiveIntronRegion	0	8.58	1.56	29.15	7.08	0.67	4.92
134	I13_SR1	SilentIntronRegion	0	11.92	0.47	36.99	10.06	0.06	0.62
135	I13_AR2	ActiveIntronRegion	0	11.13	3.24	41.96	13.21	0.63	0.00
136	I13_SR2	SilentIntronRegion	0	10.08	1.62	27.77	8.73	1.85	0.00
137	I13_AR3	ActiveIntronRegion	0	9.60	0.00	18.86	7.83	0.99	0.00
138	I13_AR4	ActiveIntronRegion	0	8.67	1.55	32.60	10.34	1.52	0.63
139	I13_SR3	SilentIntronRegion	0	23.86	4.38	31.02	12.48	17.56	6.65
140	I13_AR5	ActiveIntronRegion	0	18.14	2.02	21.09	9.06	7.08	20.70
141	I13_SR4	SilentIntronRegion	0	33.15	11.28	14.28	6.23	6.42	1.93
142	I13_AR6	ActiveIntronRegion	0	19.09	2.96	20.28	10.57	0.00	0.00
143	I13_SR5	SilentIntronRegion	0	18.97	5.87	14.50	8.30	75.66	32.78
144	I13_AR8	ActiveIntronRegion	0	6.43	1.40	31.66	8.57	0.44	0.26
145	I13_AR9	ActiveIntronRegion	1	18.88	0.98	42.68	9.25	1.81	4.14
146	I13_SR6	SilentIntronRegion	0	6.64	5.80	17.70	7.83	0.83	4.82
147	I13	Intron	0	22.08	9.01	14.74	6.80	4.35	4.01
148	I13_AR1	ActiveIntronRegion	0	22.94	4.16	18.88	11.33	0.45	2.74
149	I13_SR1	SilentIntronRegion	0	21.90	10.16	13.78	5.74	5.27	4.32
150	Ix	Intron	0	18.55	5.54	28.53	14.38	2.49	4.94
151	Ix_SR1	SilentIntronRegion	0	22.10	9.08	22.75	9.63	2.20	1.50
152	Ix_AR1	ActiveIntronRegion	0	15.97	2.95	32.85	17.90	2.71	7.48
153	I13	Intron	0	12.66	2.12	11.96	3.98	0.68	1.96
154	I13_AR2	ActiveIntronRegion	0	13.66	4.63	23.64	3.78	0.00	1.18
155	I13_SR3	SilentIntronRegion	0	13.04	2.15	12.09	4.15	0.73	1.91
156	E14_Aa	NovelBoundary	0	15.31	0.00	68.65	18.98	0.00	0.00
157	ER14a	ExonRegion	0	116.77	65.41	490.40	217.27	2.38	0.00
158	E14_Ab	KnownBoundary	0	188.36	94.89	789.22	271.97	4.99	0.00
159	ER14b	ExonRegion	0	128.08	50.85	435.00	181.22	4.70	1.33
160	E14a_E15a	KnownJunction	0	126.60	60.80	377.47	151.32	17.23	4.28
161	ER15a	ExonRegion	0	119.36	29.76	319.76	102.28	13.60	0.40
162	E15a_E16a	KnownJunction	0	100.39	36.62	371.15	97.65	31.71	0.00
163	I15	Intron	0	12.31	1.62	12.48	3.30	7.22	3.97
164	I15_SR1	SilentIntronRegion	0	12.31	1.62	12.49	3.30	7.22	3.97
165	E16_Aa	NovelBoundary	1	31.27	3.49	9.22	3.37	0.00	0.00
166	ER16a	ExonRegion	0	104.48	28.09	235.50	86.06	28.10	2.25
167	E16a_E17a	KnownJunction	1	122.98	24.58	283.15	103.42	149.07	9.57
168	I16	Intron	0	14.78	3.59	11.88	4.18	25.87	12.29
169	I16_SR1	SilentIntronRegion	0	18.40	4.23	12.09	4.12	10.07	4.62
170	I16_AR1	ActiveIntronRegion	0	11.06	1.97	11.04	3.44	131.08	100.14
171	I16_AR2	ActiveIntronRegion	0	4.74	3.58	9.29	2.83	36.57	12.38
172	I16_SR2	SilentIntronRegion	0	3.52	1.62	11.40	4.52	65.64	27.37
173	E17_Aa	NovelBoundary	0	12.77	11.92	56.58	25.56	4.83	0.00
174	ER17a	ExonRegion	0	139.90	43.58	243.44	104.22	58.33	3.56
175	E17a_E18a	KnownJunction	0	192.46	82.01	272.16	134.41	119.78	10.41
176	ER18a	ExonRegion	0	130.61	42.30	185.06	72.85	140.78	20.97
177	E18_Da	KnownBoundary	1	90.50	14.74	28.18	14.46	201.18	27.37
178	E18a_E19a	KnownJunction	0	50.31	26.72	161.10	69.16	0.00	0.00
179	ER18b	ExonRegion	0	72.86	15.78	24.41	13.66	285.40	83.90
180	E18_Db	NovelBoundary	1	51.58	8.89	52.71	25.28	178.04	93.61
181	I18_SR1	SilentIntronRegion	0	12.48	1.89	8.90	1.96	104.47	26.96
182	I18_AR1	ActiveIntronRegion	0	8.10	0.37	11.11	1.50	1.87	0.00
183	ER19a	ExonRegion	0	8.60	4.09	12.24	3.87	9.37	3.00
184	IG27_SR6	SilentIntergenicRegion	0	15.78	0.00	12.19	1.86	25.23	1.33
185	IG27_AR6	ActiveIntergenicRegion	0	77.60	11.10	35.46	5.92	186.41	24.29