Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	CHD9	Gene	0	45.48	26.95	100.53	101.05	104.79	121.07
2	219084	Transcript	0	0	0	0	0	0	0
3	447540	Transcript	0	5.98	5.12	49.54	42.49	0.00	0.00
4	398510	Transcript	0	0	0	0	0	0	0
5	450543	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1a	ExonRegion	0	0.00	1.80	8.06	4.31	0.68	0.58
7	E1a_E2a	KnownJunction	0	0.00	3.49	16.57	5.93	3.75	3.61
8	I1_AR5	ActiveIntronRegion	0	2.11	6.23	1.86	0.00	0.00	0.00
9	ER2a	ExonRegion	0	12.26	20.81	219.14	408.29	34.43	15.47
10	E2_Ab	KnownBoundary	1	12.29	62.60	471.40	779.00	98.22	43.41
11	ER2b	ExonRegion	1	18.44	30.97	399.33	605.89	62.32	26.97
12	E2_Da	KnownBoundary	0	6.99	23.68	245.75	327.71	93.06	49.11
13	E2a_E21b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
14	ER2c	ExonRegion	0	25.39	40.11	190.39	257.66	122.19	127.01
15	E2b_E3a	KnownJunction	0	79.36	33.30	39.96	40.29	380.22	405.85
16	E2b_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	9.65
17	I2_AR10	ActiveIntronRegion	0	3.75	0.61	11.61	0.00	47.49	52.81
18	I2_SR8	SilentIntronRegion	0	0.00	2.17	3.27	0.90	22.76	17.71
19	ER3a	ExonRegion	0	173.80	89.99	138.82	140.09	922.08	1692.37
20	E3_Da	NovelBoundary	1	0.00	0.00	13.09	8.16	176.46	41.05
21	E3a_E4a	KnownJunction	0	103.70	44.21	123.19	75.52	1332.60	4116.64
22	ER4a	ExonRegion	0	175.69	65.78	152.41	108.58	928.25	1568.00
23	E4a_E5a	KnownJunction	0	149.50	64.57	122.90	75.52	1131.17	1732.36
24	ER5a	ExonRegion	0	105.94	34.46	91.13	97.51	73.05	155.69
25	E5a_E6a	KnownJunction	1	103.10	65.64	112.43	137.84	27.22	139.54
26	ER6a	ExonRegion	1	85.86	47.24	103.15	132.81	11.48	52.26
27	E6a_E7a	KnownJunction	1	100.99	41.06	119.83	103.53	5.16	50.71
28	ER7a	ExonRegion	1	93.69	54.39	144.04	128.45	11.30	34.84
29	E7a_E8a	KnownJunction	0	109.24	63.61	166.79	161.43	41.53	66.83
30	ER8a	ExonRegion	0	65.74	43.52	111.20	95.90	21.07	18.34
31	E8a_E9a	KnownJunction	1	65.14	40.78	140.15	41.27	11.74	0.00
32	ER9a	ExonRegion	1	45.24	26.89	90.27	38.28	3.99	2.83
33	E9a_E10a	KnownJunction	1	44.23	13.27	69.79	12.02	9.32	9.74
34	ER10a	ExonRegion	0	40.91	20.32	105.85	94.85	5.41	8.52
35	E10a_E11a	KnownJunction	1	74.18	16.09	93.07	49.91	0.00	33.83
36	ER11a	ExonRegion	1	38.25	22.29	142.19	121.84	5.56	34.16
37	E11a_E12a	KnownJunction	1	37.72	30.99	126.15	113.48	0.00	87.23
38	ER12a	ExonRegion	1	29.78	28.89	149.64	84.28	10.01	62.32
39	E12_Da	NovelBoundary	1	0.00	13.50	10.08	0.00	0.00	0.00
40	E12a_E13a	KnownJunction	1	26.87	3.49	112.60	50.08	16.56	99.15
41	ER13a	ExonRegion	1	13.66	13.98	114.35	56.98	17.56	53.72
42	E13a_E14a	KnownJunction	0	16.75	18.56	153.76	104.67	37.87	71.20
43	E14_Aa	NovelBoundary	0	0.00	9.28	0.00	11.20	0.00	0.00
44	ER14a	ExonRegion	1	14.37	15.94	132.34	94.44	7.23	25.98
45	E14a_E15a	KnownJunction	1	18.98	20.53	134.97	93.79	9.49	58.18
46	ER15a	ExonRegion	0	9.04	13.23	108.33	80.99	4.76	11.84
47	E15a_E16a	KnownJunction	0	3.74	0.00	56.47	36.10	12.65	5.21
48	ER16a	ExonRegion	0	9.79	4.91	66.99	52.02	19.53	6.94
49	E16a_E17a	KnownJunction	0	5.97	14.74	78.67	52.52	3.50	7.47
50	I16_AR1	ActiveIntronRegion	0	0.34	0.00	2.42	1.72	29.96	13.86
51	ER17a	ExonRegion	0	5.20	16.68	68.33	40.96	6.39	9.70
52	E17a_E18a	KnownJunction	1	0.00	13.78	66.20	63.83	3.83	8.40
53	I17	Intron	0	2.54	1.32	7.72	3.42	27.18	11.16
54	I17_AR2	ActiveIntronRegion	0	4.16	1.52	11.51	2.18	32.88	12.93
55	I17_SR2	SilentIntronRegion	0	3.54	1.78	13.08	5.80	57.44	22.23
56	ER18a	ExonRegion	0	7.82	22.72	94.12	74.80	3.36	9.00
57	E18a_E19a	KnownJunction	0	23.98	21.82	218.71	129.95	0.00	9.57
58	ER19a	ExonRegion	0	15.88	28.79	144.34	106.91	0.76	9.68
59	E19a_E20a	KnownJunction	0	23.86	42.52	336.32	222.22	0.00	7.98
60	E20_Aa	NovelBoundary	0	0.00	5.29	50.09	13.10	0.00	0.00
61	ER20a	ExonRegion	0	16.72	28.30	160.22	110.74	1.24	10.84
62	E20a_E21a	KnownJunction	0	9.28	25.54	114.88	89.33	0.00	3.95
63	ER21a	ExonRegion	1	8.26	33.68	114.27	95.99	0.02	7.67
64	E21_Ab	KnownBoundary	0	10.97	27.17	113.11	125.38	0.00	19.23
65	ER21b	ExonRegion	1	7.58	26.85	88.49	78.83	0.02	26.43
66	E21a_E22a	KnownJunction	0	10.06	18.34	128.88	76.39	0.00	20.65
67	ER22a	ExonRegion	0	10.39	13.79	112.13	92.08	0.08	20.38
68	E22a_E23a	KnownJunction	1	10.06	9.73	68.20	62.09	0.00	40.47
69	I22_AR1	ActiveIntronRegion	0	13.32	6.58	4.27	7.42	0.00	0.46
70	I22_AR3	ActiveIntronRegion	0	18.24	23.07	7.79	9.33	10.21	16.64
71	I22_AR4	ActiveIntronRegion	0	10.75	11.75	2.95	9.39	16.51	32.11
72	I22_AR5	ActiveIntronRegion	0	18.40	20.68	11.45	10.35	28.23	56.20
73	I22_AR6	ActiveIntronRegion	0	9.21	4.93	4.70	4.71	34.06	79.09
74	ER23a	ExonRegion	0	15.69	5.53	112.98	89.52	3.05	6.77
75	E23a_E24a	KnownJunction	0	22.96	2.76	45.65	63.02	4.66	0.00
76	ER24a	ExonRegion	0	15.93	6.67	55.81	51.49	6.61	2.30
77	E24a_E25a	KnownJunction	0	8.50	9.45	59.43	58.07	0.00	8.23
78	ER25a	ExonRegion	0	9.38	11.09	53.21	49.71	0.00	3.95
79	E25a_E26a	KnownJunction	0	16.63	10.46	71.33	61.44	0.00	7.72
80	ER26a	ExonRegion	0	8.37	16.50	63.43	47.81	2.65	3.11
81	E26a_E27a	KnownJunction	0	0.00	6.13	35.41	32.79	9.07	0.00
82	ER27a	ExonRegion	0	2.73	6.30	47.87	33.50	4.36	0.00
83	E27a_E28a	KnownJunction	0	9.46	6.52	55.84	29.74	8.74	0.00
84	ER28a	ExonRegion	0	5.11	12.37	59.97	44.34	6.05	1.25
85	E28a_E29a	KnownJunction	0	3.74	15.30	56.47	56.17	14.57	5.04
86	ER29a	ExonRegion	0	6.33	15.30	71.95	56.28	4.36	4.73
87	E29a_E30a	KnownJunction	0	12.71	7.42	74.40	86.07	10.24	4.03
88	ER30a	ExonRegion	0	5.54	11.23	51.97	59.17	8.13	4.31
89	E30_Da	NovelBoundary	1	0.00	0.00	6.66	0.00	100.13	13.94
90	E30a_E31a	KnownJunction	0	0.00	9.62	52.88	43.28	0.00	0.00
91	E30a_E32b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
92	I30_AR1	ActiveIntronRegion	0	3.17	0.62	9.64	3.56	47.02	18.37
93	ER31a	ExonRegion	0	19.86	18.04	120.53	90.98	0.76	1.09
94	E31a_E32a	KnownJunction	0	6.15	3.49	54.53	49.97	0.00	0.00
95	E31a_E32b	KnownJunction	0	9.04	6.86	38.77	30.99	0.00	0.00
96	ER32a	ExonRegion	0	5.81	6.75	44.54	35.01	0.00	0.00
97	ER32b	ExonRegion	0	12.58	14.66	54.27	41.24	0.88	0.00
98	E32a_E33a	KnownJunction	0	7.47	12.54	57.49	37.25	0.00	0.00
99	ER33a	ExonRegion	0	11.15	18.99	65.50	37.75	1.86	0.00
100	E33_Da	KnownBoundary	0	19.22	25.93	33.36	37.25	10.32	0.00
101	E33a_E34a	KnownJunction	0	0.00	0.00	37.29	28.38	0.00	0.00
102	ER33b	ExonRegion	0	8.14	13.11	34.35	38.64	2.67	0.00
103	E33b_E34a	KnownJunction	0	2.71	2.98	43.49	46.82	0.00	0.00
104	ER34a	ExonRegion	0	11.67	9.28	76.35	56.93	0.81	0.00
105	E34a_E35a	KnownJunction	0	14.22	22.16	115.50	94.61	0.00	0.00
106	ER35a	ExonRegion	0	8.34	9.72	79.02	57.60	0.00	0.70
107	E35a_E36a	KnownJunction	0	19.88	23.40	67.00	59.43	0.00	4.53
108	ER36a	ExonRegion	0	13.89	12.62	104.58	60.23	2.44	0.96
109	E36a_E37a	KnownJunction	0	15.79	13.72	224.57	105.70	0.00	3.61
110	ER37a	ExonRegion	0	14.16	16.15	83.62	51.97	1.36	4.13
111	E37a_E38a	KnownJunction	0	7.47	13.27	32.50	31.59	0.00	0.00
112	I37_AR1	ActiveIntronRegion	1	5.80	3.07	8.86	5.15	55.95	15.03
113	ER38a	ExonRegion	1	3.84	22.06	19.61	24.23	4.03	1.23
114	E38a_E39a	KnownJunction	0	3.68	19.12	23.05	44.69	4.41	10.41
115	ER39a	ExonRegion	0	19.47	15.58	71.80	46.36	8.67	6.81
116	E39_Da	KnownBoundary	1	24.95	35.38	57.49	5.87	38.62	11.92
117	ER39b	ExonRegion	0	108.13	37.79	33.95	20.30	237.60	170.46