Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	CLN3	Gene	0	24.99	28.11	3.69	3.20	18.84	17.01
2	360019	Transcript	0	0.75	3.44	1.25	0.00	0.00	0.00
3	357076	Transcript	0	1.24	7.31	0.00	0.00	0.00	3.40
4	354630	Transcript	0	0.00	3.74	0.00	0.00	0.00	0.36
5	395653	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
6	357806	Transcript	0	0	0	0	0	0	0
7	355477	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
8	357857	Transcript	0	0	0	0	0	0	0
9	333496	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
10	359984	Transcript	0	2.67	2.99	0.02	0.00	0.74	0.30
11	ER1a	ExonRegion	0	0.75	3.44	1.25	0.00	0.00	0.00
12	E1_Ab	KnownBoundary	0	0.00	10.35	6.94	0.00	0.00	0.00
13	ER1b	ExonRegion	1	5.73	22.11	4.35	0.00	0.00	0.00
14	E1a_E1d	KnownJunction	0	14.82	33.92	3.53	3.37	0.00	0.00
15	ER1c	ExonRegion	0	9.68	27.01	4.35	0.00	0.00	0.00
16	ER1d	ExonRegion	0	2.67	2.99	0.02	0.00	0.74	0.30
17	E1_Ad	KnownBoundary	0	0.00	3.09	0.00	0.00	0.00	4.79
18	ER1e	ExonRegion	0	13.19	16.76	2.73	1.35	0.49	0.70
19	E1b_E2a	KnownJunction	0	12.11	14.34	6.83	0.00	5.16	0.00
20	E1b_E3a	NovelJunction	0	2.65	6.41	0.00	0.00	0.00	0.00
21	ER2a	ExonRegion	0	18.44	11.54	6.22	1.50	4.17	3.09
22	E2a_E3a	KnownJunction	0	43.38	31.10	11.84	2.61	10.24	4.28
23	ER3a	ExonRegion	0	33.02	35.47	5.89	8.24	6.71	1.66
24	E3a_E4a	KnownJunction	0	23.98	37.74	3.53	9.19	8.32	0.00
25	E3a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
26	E3a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
27	E3a_E10a	NovelJunction	0	0.00	6.75	0.00	0.00	0.00	0.00
28	E4_Aa	NovelBoundary	0	17.47	3.32	0.00	2.83	0.00	0.00
29	ER4a	ExonRegion	0	34.95	20.43	5.25	5.15	4.47	2.65
30	E4a_E5a	KnownJunction	0	39.77	19.40	3.30	6.14	0.00	9.07
31	E4a_E6a	KnownJunction	0	3.74	0.00	0.00	0.00	0.00	0.00
32	ER5a	ExonRegion	0	34.34	32.98	5.13	5.60	8.99	3.59
33	E5a_E6a	KnownJunction	0	15.67	26.66	2.73	9.41	14.73	4.53
34	ER6a	ExonRegion	0	31.79	23.46	4.88	6.66	18.63	7.13
35	E6_Da	NovelBoundary	0	3.74	3.49	0.00	0.00	16.90	12.43
36	E6a_E7a	KnownJunction	1	60.56	16.09	2.62	7.72	26.89	12.34
37	E6a_E9a	KnownJunction	0	2.59	2.42	3.53	0.00	0.00	0.00
38	E6a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
39	ER7a	ExonRegion	0	37.17	17.10	4.02	2.01	9.49	7.43
40	E7a_E8a	KnownJunction	0	23.80	9.45	5.18	0.00	19.98	5.21
41	E7a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
42	E8_Aa	NovelBoundary	0	3.07	2.98	0.00	0.00	14.32	0.00
43	ER8a	ExonRegion	0	15.85	12.77	1.98	1.17	13.42	9.13
44	E8a_E9a	KnownJunction	0	10.54	22.39	5.35	0.00	17.65	15.53
45	E9_Aa	NovelBoundary	0	3.74	12.04	0.00	0.00	9.32	4.79
46	ER9a	ExonRegion	0	27.37	24.23	9.94	7.49	11.95	10.60
47	E9_Da	NovelBoundary	0	3.74	7.59	0.00	0.00	18.06	3.53
48	E9a_E10a	KnownJunction	0	22.66	25.09	2.73	2.50	9.66	23.59
49	ER10a	ExonRegion	0	22.28	34.66	0.32	2.70	10.92	8.11
50	E10a_E11a	KnownJunction	0	25.85	34.14	0.00	0.00	32.63	12.09
51	E10b_E12a	KnownJunction	0	0.00	3.32	0.00	0.00	0.00	0.00
52	ER10b	ExonRegion	0	0.00	4.16	0.00	0.00	0.00	0.72
53	E11_Aa	NovelBoundary	0	9.16	0.00	3.47	0.00	9.66	0.00
54	ER11a	ExonRegion	0	26.71	32.13	4.28	8.49	28.67	11.38
55	E11_Da	NovelBoundary	0	11.21	10.46	0.00	3.37	13.07	5.21
56	E11a_E12a	KnownJunction	1	30.37	43.65	2.68	5.11	73.83	14.86
57	E12_Aa	NovelBoundary	0	7.23	0.00	0.00	4.89	15.65	0.00
58	ER12a	ExonRegion	1	36.99	62.07	4.35	2.77	31.09	11.17
59	E12_Da	NovelBoundary	0	13.74	21.37	0.00	0.00	3.75	0.00
60	E12a_E13a	KnownJunction	0	56.16	62.15	6.03	3.37	53.85	40.63
61	I12	Intron	0	8.78	4.93	2.58	0.00	0.00	0.00
62	I12_AR1	ActiveIntronRegion	0	8.91	5.01	2.62	0.00	0.00	0.00
63	E13_Aa	NovelBoundary	0	9.40	13.84	0.00	7.88	0.00	4.03
64	ER13a	ExonRegion	0	37.71	52.36	2.82	3.39	27.95	17.35
65	E13_Da	NovelBoundary	0	12.29	10.24	0.00	8.81	0.00	0.00
66	E13a_E14a	KnownJunction	0	3.31	17.55	0.00	0.00	0.00	8.31
67	E13a_E15a	KnownJunction	1	30.13	58.61	0.00	3.21	109.70	45.59
68	E14_Aa	NovelBoundary	0	396.97	272.90	177.66	137.94	397.70	371.84
69	ER14a	ExonRegion	0	0.41	4.39	0.00	0.00	0.00	1.90
70	E14_Da	NovelBoundary	0	52.42	71.32	22.43	12.29	369.65	404.75
71	E15_Aa	NovelBoundary	0	12.11	6.86	0.00	0.00	0.00	4.37
72	ER15a	ExonRegion	0	50.48	67.98	6.56	4.92	38.71	28.94
73	E15a_E16a	KnownJunction	0	70.86	117.72	7.06	5.87	67.34	58.60
74	E16_Aa	NovelBoundary	0	9.94	0.00	0.00	0.00	0.00	4.03
75	ER16a	ExonRegion	0	41.63	49.86	3.93	3.82	57.36	68.28
76	ER16b	ExonRegion	0	2.11	0.00	0.00	0.00	0.00	0.00