Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	TSC2	Gene	0	100.55	53.68	20.64	17.28	10.01	4.78
2	219476	Transcript	0	0.00	0.03	0.00	0.00	0.00	0.00
3	432909	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
4	401874	Transcript	0	0	0	0	0	0	0
5	353929	Transcript	0	0	0	0	0	0	0
6	439673	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
7	461648	Transcript	0	21.76	22.16	3.87	4.13	0.74	0.00
8	382538	Transcript	0	0	0	0	0	0	0
9	350773	Transcript	0	0	0	0	0	0	0
10	439117	Transcript	0	3.17	0.52	0.00	0.00	0.68	0.00
11	445113	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
12	467949	Transcript	0	1.94	1.96	0.60	1.56	0.05	0.05
13	463601	Transcript	0	23.64	15.57	3.76	1.03	3.20	1.31
14	490108	Transcript	0	3.74	1.43	0.21	0.24	0.04	0.00
15	488675	Transcript	0	37.47	35.03	3.47	3.20	2.10	0.02
16	463808	Transcript	0	9.04	4.13	1.63	1.34	2.88	0.54
17	483020	Transcript	0	0	0	0	0	0	0
18	471143	Transcript	0	0	0	0	0	0	0
19	497886	Transcript	0	23.57	14.70	1.82	1.13	0.00	0.09
20	ER1a	ExonRegion	0	0.00	0.03	0.00	0.00	0.00	0.00
21	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
22	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
23	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
24	E1_Ae	KnownBoundary	0	0.00	2.81	0.00	0.00	0.00	0.00
25	ER1b	ExonRegion	0	3.75	2.08	0.00	0.00	0.00	0.00
26	E1_Af	KnownBoundary	0	24.22	3.43	0.00	0.00	0.00	0.00
27	ER1c	ExonRegion	0	8.45	2.08	0.00	0.00	0.00	0.00
28	ER1d	ExonRegion	0	9.05	5.05	0.00	0.00	0.00	0.00
29	ER1e	ExonRegion	0	20.38	16.98	9.92	0.00	0.00	0.00
30	E1_Ag	KnownBoundary	0	49.29	40.44	25.16	3.15	0.00	0.00
31	ER1f	ExonRegion	1	31.02	27.33	16.38	0.00	0.00	0.00
32	ER1g	ExonRegion	1	45.53	38.76	21.52	1.62	0.00	0.00
33	E1a_E3a	KnownJunction	0	47.54	50.06	24.99	2.99	0.00	0.00
34	E1a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
35	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
36	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
37	ER3a	ExonRegion	0	63.82	48.74	48.45	35.09	4.81	2.48
38	E3a_E4a	KnownJunction	0	127.92	53.10	35.69	22.56	0.00	8.82
39	ER4a	ExonRegion	0	103.63	52.89	64.33	36.42	2.10	4.00
40	E4_Da	NovelBoundary	0	7.47	6.97	17.08	23.60	0.00	0.00
41	E4a_E5a	KnownJunction	0	114.37	72.16	55.33	40.40	10.07	5.21
42	E4a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
43	E4a_E8b	KnownJunction	0	0.00	3.37	3.53	0.00	0.00	0.00
44	ER5a	ExonRegion	0	63.40	41.42	25.93	20.07	2.92	0.80
45	E5_Da	KnownBoundary	0	8.26	29.02	0.00	0.00	0.00	0.00
46	E5a_E6a	KnownJunction	1	59.11	12.43	16.11	14.57	8.49	0.00
47	ER5b	ExonRegion	0	21.76	22.16	3.87	4.13	0.74	0.00
48	E5_Db	NovelBoundary	0	9.28	5.96	0.00	6.20	0.00	0.00
49	ER6a	ExonRegion	0	100.58	35.80	35.88	34.45	11.78	4.99
50	E6_Da	NovelBoundary	1	112.68	28.91	19.35	21.59	17.98	8.56
51	E6b_E7a	KnownJunction	0	142.75	46.85	21.29	16.58	15.23	3.53
52	ER6b	ExonRegion	0	119.89	39.29	22.01	22.76	8.33	4.10
53	E7_Aa	NovelBoundary	0	22.66	6.36	3.47	2.39	37.62	0.00
54	ER7a	ExonRegion	0	105.32	33.22	39.82	32.11	36.54	21.07
55	E7_Da	NovelBoundary	0	33.50	3.49	0.00	2.83	140.00	22.16
56	E7a_E8b	KnownJunction	0	108.22	33.18	58.29	41.00	4.00	4.03
57	I7_AR1	ActiveIntronRegion	0	1.80	3.55	0.00	0.00	15.44	3.16
58	E8_Aa	NovelBoundary	0	21.81	3.49	0.00	5.98	0.00	0.00
59	ER8a	ExonRegion	0	3.87	3.92	1.21	3.11	0.10	0.10
60	E8_Ab	KnownBoundary	0	10.61	15.30	0.00	2.66	4.49	0.00
61	ER8b	ExonRegion	0	93.20	35.99	45.62	41.78	1.03	1.19
62	E8b_E9a	KnownJunction	0	114.85	45.05	35.75	37.84	0.00	0.00
63	ER8c	ExonRegion	0	94.59	34.90	37.26	46.64	0.00	0.00
64	ER9a	ExonRegion	0	125.01	46.76	37.47	30.69	1.09	0.00
65	E9_Da	KnownBoundary	0	160.46	50.73	33.13	20.61	5.16	0.00
66	ER9b	ExonRegion	0	130.79	47.98	31.84	17.20	2.25	0.00
67	E9b_E10a	KnownJunction	0	144.61	53.71	76.56	48.28	5.16	0.00
68	ER10a	ExonRegion	0	102.23	47.03	32.73	29.58	2.81	0.00
69	E10a_E11a	KnownJunction	0	95.87	54.05	27.04	22.95	0.00	0.00
70	ER11a	ExonRegion	0	93.70	45.84	22.68	13.71	2.33	0.00
71	E11a_E12a	KnownJunction	0	82.43	67.94	25.22	6.47	4.41	0.00
72	E11a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
73	ER12a	ExonRegion	0	101.20	59.77	34.64	21.08	1.27	0.00
74	E12_Da	NovelBoundary	0	40.43	13.78	0.00	3.37	0.00	0.00
75	E12a_E13b	KnownJunction	0	63.75	46.91	23.45	4.89	4.99	0.00
76	ER13a	ExonRegion	0	23.64	15.57	3.76	1.03	3.20	1.31
77	E13_Ab	KnownBoundary	0	74.84	34.25	15.65	5.82	12.07	4.95
78	ER13b	ExonRegion	0	108.08	54.93	37.09	22.61	3.93	2.45
79	E13a_E14a	KnownJunction	0	134.61	73.12	24.02	8.16	17.98	14.02
80	ER14a	ExonRegion	0	121.71	55.89	36.33	34.24	7.01	5.38
81	E14a_E15b	KnownJunction	0	131.60	59.90	19.64	29.96	12.65	0.00
82	ER15a	ExonRegion	0	3.74	1.43	0.21	0.24	0.04	0.00
83	E15_Ab	KnownBoundary	0	12.29	2.92	0.00	0.00	0.00	0.00
84	ER15b	ExonRegion	0	126.88	44.58	36.11	28.76	4.03	5.58
85	E15c_E16a	KnownJunction	0	95.14	56.86	36.94	32.35	9.57	9.65
86	ER15c	ExonRegion	0	88.68	39.47	36.93	32.31	5.42	9.26
87	ER15d	ExonRegion	0	80.58	41.20	36.21	29.08	6.03	8.95
88	E16_Aa	NovelBoundary	0	19.28	6.30	3.53	0.00	10.15	0.00
89	ER16a	ExonRegion	0	104.89	56.83	42.73	27.02	6.86	5.79
90	E16_Da	NovelBoundary	0	16.51	3.49	3.24	0.00	39.62	11.25
91	E16a_E17b	KnownJunction	0	186.91	76.16	80.83	41.43	9.24	3.86
92	I16	Intron	0	10.75	10.97	0.82	0.41	13.30	9.08
93	I16_AR1	ActiveIntronRegion	0	10.78	11.00	0.82	0.41	13.33	9.10
94	E17_Aa	NovelBoundary	0	199.63	116.99	26.19	11.80	86.56	77.74
95	ER17a	ExonRegion	0	37.47	35.03	3.47	3.20	2.10	0.02
96	E17_Ab	KnownBoundary	0	65.20	28.24	0.00	0.00	8.82	0.00
97	ER17b	ExonRegion	0	130.03	68.10	30.22	19.82	6.90	1.53
98	E17b_E18a	KnownJunction	0	159.80	96.01	17.36	24.58	0.00	0.00
99	ER17c	ExonRegion	0	149.90	66.78	22.04	25.24	1.81	0.00
100	E18_Aa	NovelBoundary	0	3.74	3.49	0.00	6.42	0.00	0.00
101	ER18a	ExonRegion	0	152.57	72.93	49.12	20.56	1.79	0.00
102	E18a_E19a	KnownJunction	0	131.84	44.10	32.11	12.40	5.16	0.00
103	ER19a	ExonRegion	0	109.89	37.88	24.34	9.68	0.59	0.00
104	E19a_E20a	KnownJunction	0	140.04	54.22	15.48	19.19	0.00	0.00
105	ER20a	ExonRegion	0	74.14	44.27	11.53	9.73	0.06	0.00
106	E20_Da	KnownBoundary	0	48.57	63.56	21.12	17.56	0.00	0.00
107	ER20b	ExonRegion	0	55.01	63.67	14.33	15.66	1.81	0.00
108	E20b_E21a	KnownJunction	0	86.65	79.36	16.00	16.20	4.83	0.00
109	ER21a	ExonRegion	0	123.76	74.02	20.24	22.58	1.26	0.44
110	E21a_E22b	KnownJunction	0	121.05	93.14	19.35	35.56	4.41	5.04
111	ER22a	ExonRegion	0	5.66	2.47	0.92	1.95	0.01	0.01
112	E22_Ab	KnownBoundary	0	13.86	3.49	3.02	0.00	0.00	0.00
113	ER22b	ExonRegion	0	137.58	76.42	29.05	32.62	0.32	1.26
114	E22a_E23a	KnownJunction	0	255.85	97.14	43.60	48.88	0.00	5.04
115	ER23a	ExonRegion	0	180.91	92.87	37.47	49.51	0.00	1.04
116	E23_Da	KnownBoundary	0	30.67	26.32	2.96	2.34	0.00	0.00
117	E23a_E24a	KnownJunction	0	110.93	60.69	22.14	29.20	0.00	0.00
118	ER23b	ExonRegion	0	12.42	5.78	2.34	0.72	5.75	1.07
119	E23_Db	NovelBoundary	0	10.18	2.42	0.00	3.37	9.41	0.00
120	ER24a	ExonRegion	0	227.26	112.10	64.14	56.54	0.21	0.00
121	E24a_E25a	KnownJunction	0	179.26	72.33	34.50	37.63	0.00	0.00
122	ER25a	ExonRegion	0	100.63	47.26	30.71	24.21	1.47	0.00
123	E25_Ab	NovelBoundary	0	52.54	43.87	23.57	13.38	0.00	0.00
124	E25a_E26a	KnownJunction	0	114.13	76.83	29.54	13.43	0.00	0.00
125	ER25b	ExonRegion	0	91.56	50.99	30.42	19.39	0.00	0.00
126	ER25c	ExonRegion	0	86.74	50.55	28.60	15.08	0.00	0.00
127	ER25d	ExonRegion	0	3.69	1.81	0.00	0.00	0.00	0.00
128	E25b_E26a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
129	ER26a	ExonRegion	1	74.32	52.25	26.50	7.37	0.23	0.00
130	E26_Da	NovelBoundary	0	58.63	20.36	3.53	2.45	0.00	0.00
131	E26a_E27a	KnownJunction	0	0.00	5.06	0.00	0.00	0.00	0.00
132	E26a_E28b	KnownJunction	0	19.88	23.74	12.41	5.87	3.58	0.00
133	E26a_E28c	KnownJunction	0	40.01	8.83	15.65	14.46	0.00	0.00
134	I26	Intron	0	43.13	18.10	5.71	4.53	0.00	0.00
135	I26_SR1	SilentIntronRegion	0	21.68	2.76	1.48	0.93	0.00	0.00
136	I26_AR1	ActiveIntronRegion	0	43.93	16.70	3.49	2.13	0.00	0.00
137	I26_AR2	ActiveIntronRegion	0	47.73	26.04	2.02	1.23	0.00	0.00
138	I26_SR2	SilentIntronRegion	0	48.79	26.86	7.22	1.47	0.00	0.00
139	I26_AR3	ActiveIntronRegion	0	45.67	19.78	8.13	8.04	0.00	0.00
140	E27_Aa	NovelBoundary	1	59.47	11.42	8.14	11.58	0.00	0.00
141	ER27a	ExonRegion	0	8.59	8.63	0.00	0.00	0.11	0.00
142	E27_Da	NovelBoundary	1	36.64	0.00	3.07	3.15	4.33	0.00
143	E27a_E28b	KnownJunction	0	7.47	4.61	0.00	0.00	0.00	0.00
144	ER28a	ExonRegion	0	47.13	23.22	3.63	2.25	0.00	0.18
145	E28_Ab	KnownBoundary	0	23.14	5.29	12.98	0.00	0.00	0.00
146	E28_Ac	KnownBoundary	0	27.05	0.00	2.45	6.74	0.00	0.00
147	ER28b	ExonRegion	0	72.49	36.01	15.93	7.90	3.62	0.00
148	ER28c	ExonRegion	0	92.75	50.30	21.51	12.24	1.39	0.00
149	E28a_E29a	KnownJunction	0	70.50	28.52	25.10	3.15	0.00	0.00
150	ER29a	ExonRegion	0	49.13	32.36	13.50	5.73	0.00	0.00
151	E29a_E30a	KnownJunction	0	36.58	57.93	0.00	3.32	0.00	0.00
152	ER30a	ExonRegion	0	32.75	48.48	7.24	1.71	0.00	0.00
153	E30_Da	KnownBoundary	0	34.47	33.52	13.26	2.56	0.00	0.00
154	E30_Db	KnownBoundary	0	19.94	19.80	6.32	3.10	0.00	0.00
155	ER30b	ExonRegion	0	27.22	30.35	10.78	2.00	0.00	0.00
156	ER30c	ExonRegion	0	33.55	18.56	10.63	7.31	0.00	0.00
157	E30c_E31a	KnownJunction	0	54.77	26.94	10.19	12.29	0.00	0.00
158	ER31a	ExonRegion	0	81.01	45.80	22.60	15.52	0.65	0.00
159	E31a_E32a	KnownJunction	0	119.25	88.31	20.32	15.93	0.00	0.00
160	ER32a	ExonRegion	0	83.77	55.51	20.68	14.81	0.67	0.00
161	E32a_E33a	KnownJunction	1	27.30	0.00	3.53	0.00	0.00	0.00
162	E32a_E34a	KnownJunction	0	53.45	19.85	11.90	0.00	0.00	0.00
163	I32	Intron	0	32.75	16.36	2.07	0.77	0.00	0.00
164	I32_AR1	ActiveIntronRegion	0	32.85	16.41	2.08	0.77	0.00	0.00
165	E33_Aa	NovelBoundary	0	27.12	49.38	6.38	6.42	0.00	0.00
166	ER33a	ExonRegion	0	24.27	7.56	5.73	0.66	0.00	0.00
167	E33_Da	NovelBoundary	0	30.67	36.17	5.81	0.00	0.00	0.00
168	E33a_E34a	KnownJunction	0	23.44	10.80	12.75	2.66	0.00	0.00
169	I33	Intron	0	38.43	18.05	1.66	2.89	0.12	0.00
170	I33_AR1	ActiveIntronRegion	0	38.50	18.08	1.67	2.90	0.12	0.00
171	E34_Aa	NovelBoundary	0	43.63	22.16	3.53	0.00	0.00	0.00
172	ER34a	ExonRegion	0	103.84	70.13	25.23	19.37	0.87	0.00
173	E34a_E35a	KnownJunction	0	130.82	90.89	12.69	8.21	4.33	0.00
174	ER35a	ExonRegion	0	135.97	79.04	28.97	32.40	2.30	0.86
175	E35a_E36a	KnownJunction	1	273.44	128.97	23.85	48.45	10.32	10.41
176	ER36a	ExonRegion	1	213.91	93.54	17.72	38.89	8.68	2.41
177	E36a_E37a	KnownJunction	0	343.52	114.68	45.60	71.88	35.04	4.53
178	ER37a	ExonRegion	0	350.55	129.63	54.64	58.26	12.99	6.11
179	E37a_E38a	KnownJunction	0	385.28	155.69	44.57	67.42	32.05	13.18
180	ER38a	ExonRegion	0	331.04	153.99	42.45	57.97	29.60	5.87
181	E38a_E39a	KnownJunction	0	569.18	215.36	64.38	100.43	76.83	19.65
182	E38a_E39b	KnownJunction	0	0.00	6.19	0.00	0.00	0.00	0.00
183	ER39a	ExonRegion	0	449.13	208.85	66.99	75.94	35.06	9.87
184	E39_Ab	KnownBoundary	0	485.54	264.92	79.81	63.56	58.68	13.60
185	ER39b	ExonRegion	0	530.31	217.72	48.82	46.92	46.94	11.23
186	E39a_E40a	KnownJunction	0	806.41	390.45	95.86	64.65	115.78	29.64
187	ER40a	ExonRegion	0	553.97	328.12	59.98	50.72	71.82	19.57
188	E40a_E41a	KnownJunction	0	638.35	240.34	57.95	60.46	136.67	34.34
189	ER41a	ExonRegion	0	523.27	229.10	57.64	51.37	46.73	18.73
190	E41a_E42a	KnownJunction	0	787.55	411.72	64.61	54.70	132.34	41.05
191	ER42a	ExonRegion	0	349.59	256.86	28.92	22.67	100.61	29.26
192	E42a_E43a	KnownJunction	0	332.98	212.61	25.22	20.55	487.43	141.47
193	E43_Aa	NovelBoundary	0	12.53	6.02	0.00	0.00	0.00	11.42
194	ER43a	ExonRegion	0	133.98	97.17	13.74	9.41	142.90	93.49
195	ER43b	ExonRegion	0	14.54	3.92	1.93	0.00	15.87	6.58
196	ER43c	ExonRegion	0	6.33	2.08	0.00	0.00	5.42	0.00
197	ER43d	ExonRegion	0	3.17	0.52	0.00	0.00	0.68	0.00