Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	MARK3	Gene	0	116.25	65.51	62.21	38.00	259.78	120.66
2	411530	Transcript	0	46.67	22.24	17.46	8.16	28.08	4.45
3	429436	Transcript	0	0	0	0	0	0	0
4	454698	Transcript	0	7.23	0.00	3.53	5.65	5.16	0.00
5	416682	Transcript	0	0	0	0	0	0	0
6	216288	Transcript	0	0	0	0	0	0	0
7	440884	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
8	303622	Transcript	0	0	0	0	0	0	0
9	335102	Transcript	0	0	0	0	0	0	0
10	ER1a	ExonRegion	0	6.17	7.02	17.95	11.90	2.29	1.39
11	E1a_E2a	KnownJunction	1	20.31	6.97	56.30	50.62	24.30	0.00
12	ER2a	ExonRegion	0	26.20	15.55	86.75	57.03	14.12	14.90
13	E2a_E3a	KnownJunction	0	22.78	21.94	73.89	62.91	22.97	32.58
14	I2_SR4	SilentIntronRegion	0	10.70	4.21	12.48	5.82	3.66	1.25
15	ER3a	ExonRegion	0	27.25	20.54	95.47	82.38	7.30	6.55
16	E3a_E4a	KnownJunction	0	42.00	23.68	111.86	92.38	5.16	0.00
17	I3_AR4	ActiveIntronRegion	0	14.78	8.31	22.18	15.08	0.00	1.85
18	E4_Aa	NovelBoundary	0	5.72	3.49	3.36	0.00	170.55	80.35
19	ER4a	ExonRegion	0	38.22	33.62	94.75	73.60	14.76	11.94
20	E4a_E5a	KnownJunction	0	43.87	45.39	89.32	47.09	44.78	49.28
21	I4_AR1	ActiveIntronRegion	0	4.55	1.12	1.76	0.58	53.60	24.93
22	ER5a	ExonRegion	0	41.27	22.10	95.92	52.45	11.26	14.30
23	E5_Da	NovelBoundary	0	0.00	0.00	22.88	2.88	0.00	0.00
24	E5a_E6a	KnownJunction	0	58.51	24.69	114.02	66.99	9.66	15.20
25	I5_AR2	ActiveIntronRegion	0	3.03	0.64	5.76	5.03	41.99	25.17
26	I5_AR3	ActiveIntronRegion	0	2.11	3.64	13.04	7.94	41.81	25.11
27	ER6a	ExonRegion	0	60.28	19.75	99.60	60.77	9.93	19.06
28	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	5.21
29	E6a_E8a	KnownJunction	0	85.08	26.32	107.70	69.81	44.03	57.09
30	ER7a	ExonRegion	0	0.00	0.00	3.02	0.00	43.39	16.10
31	E7_Da	NovelBoundary	0	0.00	0.00	3.53	2.56	76.08	116.36
32	E7a_E8a	KnownJunction	0	0.00	0.00	10.25	0.00	0.00	0.00
33	ER8a	ExonRegion	0	74.45	53.58	117.93	79.10	23.12	22.02
34	E8a_E9a	KnownJunction	0	83.39	89.21	132.92	84.50	13.90	20.07
35	E8a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
36	E9_Aa	NovelBoundary	1	7.17	3.49	24.25	0.00	0.00	0.00
37	ER9a	ExonRegion	0	68.77	60.14	106.19	65.74	38.36	24.82
38	E9a_E10a	KnownJunction	0	72.91	61.70	90.68	52.52	141.58	79.59
39	ER10a	ExonRegion	0	69.06	57.98	122.42	75.33	66.64	49.91
40	E10a_E11a	KnownJunction	0	62.49	45.39	120.17	41.76	181.62	94.62
41	I10	Intron	0	4.48	0.63	14.47	3.26	17.52	5.04
42	I10_SR2	SilentIntronRegion	0	5.01	0.70	15.93	3.65	19.02	5.49
43	E11_Aa	NovelBoundary	0	9.88	0.00	25.39	19.25	8.41	28.21
44	ER11a	ExonRegion	0	75.18	61.04	137.65	57.93	114.79	58.87
45	E11a_E12a	KnownJunction	0	72.85	37.85	128.20	46.43	103.63	45.59
46	ER12a	ExonRegion	0	82.83	51.41	121.14	58.95	152.10	67.92
47	E12_Da	NovelBoundary	0	38.38	21.99	3.53	8.10	147.33	109.65
48	E12a_E13a	KnownJunction	1	88.58	12.60	57.95	22.46	95.30	34.67
49	E12a_E13b	KnownJunction	0	7.23	0.00	3.53	5.65	5.16	0.00
50	I12	Intron	0	25.32	12.92	5.65	5.91	29.77	18.18
51	I12_SR1	SilentIntronRegion	0	20.80	9.15	4.03	3.99	72.35	45.97
52	I12_AR1	ActiveIntronRegion	0	28.47	15.48	6.75	7.21	2.59	0.44
53	E13_Aa	NovelBoundary	1	24.70	3.49	0.00	12.34	14.32	5.21
54	ER13a	ExonRegion	0	95.27	40.45	118.87	47.57	74.24	23.23
55	E13_Ab	KnownBoundary	0	143.53	81.56	187.68	85.04	151.07	55.50
56	ER13b	ExonRegion	0	98.55	45.98	103.35	54.92	92.09	41.33
57	E13a_E14a	KnownJunction	0	119.61	68.39	112.94	49.86	141.25	70.02
58	E13a_E15a	NovelJunction	1	0.00	13.84	3.53	0.00	0.00	0.00
59	I13_AR3	ActiveIntronRegion	1	5.41	0.00	8.35	3.22	4.63	32.41
60	ER14a	ExonRegion	0	131.34	76.93	121.41	69.90	151.22	60.78
61	E14a_E15a	KnownJunction	0	203.61	116.88	154.21	111.74	377.97	139.62
62	ER15a	ExonRegion	0	196.68	109.17	94.78	79.40	187.96	98.60
63	E15_Da	NovelBoundary	1	17.17	0.00	6.26	22.46	0.00	0.00
64	E15a_E16a	KnownJunction	0	6.45	0.00	6.72	0.00	14.07	0.00
65	E15a_E17a	KnownJunction	0	201.68	123.96	84.53	25.94	326.87	125.51
66	I15	Intron	0	17.34	5.55	24.69	13.45	4.61	9.54
67	I15_SR1	SilentIntronRegion	0	10.38	0.95	22.30	17.14	0.00	0.00
68	I15_AR1	ActiveIntronRegion	0	12.46	4.74	20.88	10.23	0.00	0.00
69	I15_AR2	ActiveIntronRegion	0	25.61	3.34	19.84	10.60	0.00	0.00
70	I15_AR3	ActiveIntronRegion	0	5.61	6.23	14.73	9.76	0.00	0.00
71	I15_AR4	ActiveIntronRegion	0	5.22	8.31	19.68	10.26	0.00	0.00
72	I15_SR2	SilentIntronRegion	0	11.05	4.64	23.51	8.34	0.63	0.49
73	I15_AR5	ActiveIntronRegion	0	17.14	4.16	91.25	25.34	0.00	0.00
74	I15_AR6	ActiveIntronRegion	0	25.72	7.66	44.76	26.76	4.71	0.76
75	I15_AR8	ActiveIntronRegion	0	19.55	11.22	17.60	17.04	11.85	15.00
76	I15_AR9	ActiveIntronRegion	1	15.94	5.24	24.15	9.27	2.95	25.81
77	I15_AR11	ActiveIntronRegion	1	27.81	7.12	20.35	9.61	10.04	32.90
78	E16_Aa	NovelBoundary	0	47.18	14.91	28.41	19.90	13.73	13.01
79	ER16a	ExonRegion	0	68.66	25.44	31.61	16.60	20.40	3.51
80	E16_Da	NovelBoundary	0	28.32	9.11	28.69	31.70	0.00	12.34
81	E16a_E17a	KnownJunction	1	64.90	41.28	14.06	7.88	49.77	9.82
82	I16	Intron	0	32.62	12.27	36.28	17.13	29.98	6.52
83	I16_AR1	ActiveIntronRegion	0	32.71	12.31	36.39	17.18	30.07	6.54
84	E17_Aa	NovelBoundary	0	55.92	31.16	32.96	36.70	121.61	20.40
85	ER17a	ExonRegion	0	220.05	117.00	51.53	37.32	176.79	84.31
86	E17a_E19a	KnownJunction	1	157.39	34.53	9.79	12.89	286.91	93.02
87	E17a_E20a	KnownJunction	1	3.31	39.43	6.55	5.55	16.98	11.50
88	I17_AR1	ActiveIntronRegion	0	10.25	1.93	10.70	8.44	5.25	0.00
89	I17_AR2	ActiveIntronRegion	0	7.25	2.44	31.03	12.43	12.72	7.16
90	E18a_E19a	KnownJunction	0	55.01	67.61	3.13	6.20	109.62	78.92
91	ER18a	ExonRegion	0	63.50	62.25	3.06	9.26	50.16	46.42
92	I18	Intron	0	21.26	7.51	14.67	8.80	17.99	5.59
93	I18_AR1	ActiveIntronRegion	0	21.29	7.52	14.70	8.82	18.02	5.60
94	E19_Aa	NovelBoundary	1	52.48	10.24	0.00	0.00	76.24	45.84
95	ER19a	ExonRegion	0	258.38	106.09	42.73	29.06	246.89	108.40
96	E19a_E20a	KnownJunction	1	366.36	109.12	72.86	42.79	460.13	172.19
97	E20_Aa	NovelBoundary	0	36.58	25.25	18.67	2.66	104.38	35.93
98	ER20a	ExonRegion	0	238.75	127.37	35.17	21.50	836.05	381.13