Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	IFT88	Gene	0	17.10	10.58	10.83	8.48	30.68	27.84
2	351808	Transcript	0	0.00	0.00	6.77	0.00	4.33	5.21
3	382778	Transcript	0	0	0	0	0	0	0
4	389374	Transcript	0	0	0	0	0	0	0
5	319980	Transcript	0	0	0	0	0	0	0
6	389373	Transcript	0	1.79	0.00	8.28	2.05	8.03	3.70
7	461115	Transcript	0	0.81	1.43	0.56	0.63	7.40	5.99
8	482172	Transcript	0	2.11	2.77	2.53	1.08	2.41	4.45
9	460931	Transcript	0	1.56	2.13	1.04	1.73	3.35	5.47
10	470695	Transcript	0	5.05	7.20	14.41	4.60	8.02	0.45
11	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
12	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
13	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
14	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
15	ER1c	ExonRegion	0	4.88	3.05	2.29	4.00	2.33	0.74
16	E1a_E2a	KnownJunction	0	2.95	2.76	3.42	2.66	10.32	0.00
17	E1a_E3a	KnownJunction	0	0.00	0.00	6.77	0.00	4.33	5.21
18	ER2a	ExonRegion	0	2.48	0.36	3.17	1.84	6.59	1.21
19	E2_Da	KnownBoundary	0	9.58	0.00	7.00	0.00	19.64	5.04
20	E2a_E2b	KnownJunction	0	3.56	0.00	0.00	5.44	0.00	0.00
21	ER2b	ExonRegion	0	1.79	0.00	8.28	2.05	8.03	3.70
22	E2_Ab	KnownBoundary	0	0.00	0.00	6.15	7.78	4.83	4.95
23	ER2c	ExonRegion	0	1.83	1.41	11.52	11.46	5.17	1.70
24	E2_Db	NovelBoundary	0	0.00	0.00	2.73	0.00	12.07	23.93
25	E2b_E3a	KnownJunction	0	0.00	0.00	14.35	3.10	0.00	0.00
26	ER3a	ExonRegion	0	3.19	7.77	27.65	10.05	3.63	1.79
27	E3a_E4a	KnownJunction	0	6.69	2.36	34.04	26.53	14.65	9.15
28	ER4a	ExonRegion	0	8.27	12.47	22.27	17.92	2.95	3.05
29	E4b_E5a	KnownJunction	0	6.63	24.19	9.85	9.08	0.00	0.00
30	E4b_E6a	NovelJunction	0	3.74	0.00	6.49	11.15	4.00	0.00
31	ER4b	ExonRegion	1	6.33	24.93	10.86	10.77	0.00	0.00
32	ER5a	ExonRegion	1	4.19	19.14	14.52	12.62	0.60	0.00
33	E5a_E6a	KnownJunction	0	3.74	8.16	22.60	19.68	0.00	0.00
34	ER6a	ExonRegion	0	3.44	10.62	31.70	18.43	5.42	0.72
35	E6a_E7a	KnownJunction	0	3.31	14.57	40.70	12.40	11.65	3.61
36	ER7a	ExonRegion	0	1.65	10.39	25.53	14.61	1.33	4.77
37	E7a_E8a	KnownJunction	0	2.83	9.22	30.00	5.87	0.00	5.21
38	ER8a	ExonRegion	0	7.33	9.38	27.90	23.14	0.85	1.14
39	E8a_E9a	KnownJunction	0	3.25	0.00	16.00	8.65	5.16	0.00
40	ER9a	ExonRegion	0	8.33	3.52	16.19	23.25	7.11	3.42
41	E9a_E10a	KnownJunction	0	13.50	9.90	9.51	21.80	16.81	4.03
42	ER10a	ExonRegion	0	7.40	1.70	18.29	16.31	7.39	6.72
43	E10a_E11a	KnownJunction	0	6.75	0.00	22.14	22.78	13.23	13.35
44	ER11a	ExonRegion	1	11.99	0.02	23.94	12.95	19.62	20.31
45	E11_Da	NovelBoundary	0	0.00	10.12	3.53	0.00	0.00	0.00
46	E11a_E12a	KnownJunction	0	12.65	0.00	51.06	17.73	8.82	33.16
47	ER12a	ExonRegion	0	9.01	5.42	26.11	22.69	19.67	21.46
48	E12a_E13a	KnownJunction	0	21.39	9.34	55.27	22.78	20.73	19.56
49	ER13a	ExonRegion	0	19.30	7.43	19.83	12.85	14.61	12.68
50	E13a_E14a	KnownJunction	1	28.26	10.80	27.61	14.63	45.11	12.43
51	E14_Ab	NovelBoundary	0	23.98	17.21	34.10	13.87	36.96	15.95
52	ER14a	ExonRegion	0	23.70	16.05	27.65	11.55	25.15	11.53
53	ER14b	ExonRegion	0	17.41	19.50	23.72	8.00	16.24	11.79
54	E14a_E15a	KnownJunction	0	0.00	3.49	0.00	0.00	0.00	0.00
55	E14a_E16b	KnownJunction	0	6.15	13.22	14.63	6.31	7.82	12.85
56	I14_SR1	SilentIntronRegion	0	1.35	1.33	4.62	5.50	0.00	0.39
57	I14	Intron	0	8.34	2.81	2.78	3.15	35.24	22.48
58	I14_AR1	ActiveIntronRegion	0	7.56	1.43	4.09	3.26	5.02	7.65
59	I14_SR2	SilentIntronRegion	0	4.00	5.24	0.41	1.59	13.04	4.01
60	I14_AR3	ActiveIntronRegion	0	11.73	4.06	2.66	4.45	101.06	60.91
61	E15_Aa	NovelBoundary	1	14.04	6.97	2.62	6.74	39.37	4.11
62	ER15a	ExonRegion	0	0.00	0.87	0.00	0.00	1.67	0.00
63	E15_Da	NovelBoundary	1	33.50	9.28	2.56	0.00	55.19	4.95
64	E15a_E16b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
65	ER16a	ExonRegion	0	4.22	5.54	5.07	2.15	4.82	3.70
66	ER16b	ExonRegion	0	16.69	15.77	13.77	8.49	9.29	9.56
67	E16a_E17a	KnownJunction	0	29.16	20.08	13.95	5.82	12.57	17.63
68	ER17a	ExonRegion	0	16.11	22.54	17.58	9.67	19.45	18.31
69	E17a_E18a	KnownJunction	0	10.54	26.49	34.10	20.50	17.31	26.87
70	ER18a	ExonRegion	0	9.50	20.78	28.24	15.08	11.75	14.81
71	ER18b	ExonRegion	0	24.09	17.52	17.12	10.82	13.57	21.65
72	E18_Da	KnownBoundary	0	0.00	0.00	5.01	5.98	20.48	4.28
73	E18a_E19a	KnownJunction	0	41.52	13.11	12.87	11.69	21.06	16.54
74	E18a_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	5.21
75	ER18c	ExonRegion	0	3.25	1.37	2.23	2.53	27.92	23.98
76	E18_Db	NovelBoundary	0	5.42	0.00	9.91	0.00	0.00	0.00
77	E19_Aa	NovelBoundary	0	0.00	0.00	5.58	5.65	0.00	0.00
78	ER19a	ExonRegion	0	28.32	17.96	21.68	14.43	15.98	13.12
79	E19a_E20a	KnownJunction	0	50.74	22.72	12.18	13.38	36.29	28.46
80	ER20a	ExonRegion	0	28.32	29.54	16.06	14.37	23.67	25.15
81	E20_Da	KnownBoundary	0	6.09	2.98	0.00	3.15	9.16	4.79
82	E20a_E21a	KnownJunction	0	18.98	6.19	21.80	6.36	17.23	24.01
83	ER20b	ExonRegion	0	1.56	2.13	1.04	1.73	3.35	5.47
84	E20_Db	NovelBoundary	0	10.48	0.00	0.00	6.52	7.66	7.89
85	I20_AR1	ActiveIntronRegion	0	1.06	1.39	2.37	1.62	11.61	12.20
86	ER21a	ExonRegion	0	35.03	15.30	14.45	13.23	16.31	17.49
87	E21a_E22a	KnownJunction	0	54.89	37.85	12.98	18.65	13.57	34.09
88	E22_Aa	NovelBoundary	0	0.00	6.52	8.48	2.50	0.00	0.00
89	ER22a	ExonRegion	0	39.33	16.08	13.09	12.89	10.89	17.75
90	E22a_E23a	KnownJunction	0	36.15	14.91	15.65	17.24	22.22	52.81
91	ER23a	ExonRegion	0	44.78	20.42	13.73	18.21	17.64	33.95
92	E23a_E24a	KnownJunction	0	57.48	30.88	9.91	15.55	38.04	80.60
93	ER24a	ExonRegion	0	50.93	31.76	17.41	12.24	19.48	26.62
94	E24a_E25a	KnownJunction	0	3.74	0.00	4.90	0.00	8.66	3.78
95	E24a_E25c	KnownJunction	0	67.07	48.76	12.98	10.71	43.03	24.26
96	ER25a	ExonRegion	0	5.63	0.00	5.79	0.00	1.81	7.40
97	ER25b	ExonRegion	0	7.47	4.21	3.79	3.85	14.02	8.23
98	E25_Da	KnownBoundary	0	5.66	20.25	8.20	2.61	10.32	0.00
99	E25a_E25c	KnownJunction	0	11.81	0.00	5.07	2.34	32.55	9.40
100	ER25c	ExonRegion	0	5.05	7.20	14.41	4.60	8.02	0.45
101	E25_Ac	KnownBoundary	0	3.49	3.49	8.71	4.46	15.23	0.00
102	ER25d	ExonRegion	0	88.72	59.17	21.50	34.24	69.51	75.69
103	E25_Db	NovelBoundary	0	0.00	0.00	28.80	2.45	0.00	0.00
104	E25b_E26a	KnownJunction	0	96.29	64.74	13.04	28.65	120.11	95.04
105	E26_Aa	NovelBoundary	0	0.00	0.00	9.96	0.00	0.00	10.41
106	ER26a	ExonRegion	0	76.39	45.68	8.66	10.48	75.59	79.38
107	E26a_E27a	KnownJunction	0	74.54	40.33	12.47	9.41	209.75	228.45
108	E26a_E28a	NovelJunction	0	7.29	13.95	9.85	0.00	29.63	24.26
109	I26_AR2	ActiveIntronRegion	1	3.42	2.79	4.98	2.35	38.88	9.84
110	I26_SR3	SilentIntronRegion	0	0.00	2.08	2.17	2.15	66.29	23.14
111	I26_AR3	ActiveIntronRegion	1	0.00	2.08	1.90	2.15	69.83	22.68
112	I26_AR4	ActiveIntronRegion	0	5.32	4.10	3.64	2.07	59.29	32.51
113	I26_AR5	ActiveIntronRegion	0	2.82	3.95	1.25	1.23	13.08	6.37
114	I26_AR6	ActiveIntronRegion	1	3.52	3.46	0.00	0.00	0.00	6.79
115	I26_AR7	ActiveIntronRegion	0	5.21	1.21	3.47	4.37	9.96	16.65
116	E27_Aa	NovelBoundary	0	10.30	5.51	3.19	0.00	24.80	4.95
117	ER27a	ExonRegion	0	71.08	34.68	9.55	7.34	108.53	99.53
118	E27a_E28a	KnownJunction	1	105.45	28.40	23.68	18.81	127.27	133.24
119	I27	Intron	0	4.72	2.65	2.08	1.38	11.55	3.55
120	I27_AR1	ActiveIntronRegion	0	4.82	2.71	2.13	1.41	11.79	3.62
121	E28_Aa	NovelBoundary	0	9.28	5.91	7.06	6.52	27.47	13.18
122	ER28a	ExonRegion	0	71.40	26.25	4.33	3.06	236.73	192.87
123	E28_Da	KnownBoundary	1	56.76	40.67	3.53	0.00	150.32	399.80
124	ER28b	ExonRegion	0	20.44	18.27	0.66	0.00	176.42	164.85
125	E28_Db	KnownBoundary	1	0.00	13.27	0.00	0.00	5.08	0.00
126	E28_Dc	KnownBoundary	0	2.65	0.00	0.00	0.00	0.00	10.83
127	ER28c	ExonRegion	0	2.11	8.31	0.00	0.00	7.23	16.66
128	ER28d	ExonRegion	0	1.93	3.13	0.00	0.00	4.22	9.87
129	IG68_AR2	ActiveIntergenicRegion	0	19.02	1.32	7.53	6.93	10.99	10.17