Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	CEP290	Gene	0	45.17	19.22	35.62	31.26	19.54	57.27
2	309041	Transcript	1	49.47	32.50	33.80	41.75	25.01	197.51
3	397838	Transcript	1	7.86	6.04	5.99	5.23	1.51	27.46
4	ER1a	ExonRegion	0	29.83	11.85	21.94	15.71	11.24	54.27
5	E1a_E2a	KnownJunction	0	22.36	11.59	12.58	9.41	27.22	159.10
6	ER2a	ExonRegion	1	22.68	15.66	22.89	32.04	9.23	61.40
7	E2a_E3a	KnownJunction	1	54.11	23.45	42.92	63.78	16.98	191.67
8	I2	Intron	0	2.05	0.00	3.16	0.52	12.57	7.93
9	I2_SR1	SilentIntronRegion	0	2.05	0.00	3.17	0.52	12.60	7.95
10	ER3a	ExonRegion	0	65.51	38.64	39.60	63.52	35.08	186.79
11	E3a_E4a	KnownJunction	1	75.98	52.08	29.54	63.40	71.58	417.52
12	ER4a	ExonRegion	1	72.23	59.19	48.21	57.66	27.43	224.98
13	E4a_E5b	KnownJunction	1	72.97	55.40	56.75	51.06	26.30	375.79
14	ER5a	ExonRegion	0	26.04	20.78	16.66	15.80	6.03	80.84
15	ER5b	ExonRegion	1	80.47	55.69	35.20	45.53	21.25	236.72
16	E5_Da	NovelBoundary	0	5.60	0.00	20.09	9.46	18.64	0.00
17	E5a_E6a	KnownJunction	1	106.65	45.78	42.12	30.61	27.80	426.08
18	I5_SR2	SilentIntronRegion	0	0.36	0.00	0.67	0.20	21.54	9.20
19	ER6a	ExonRegion	1	57.79	34.20	33.23	37.62	7.63	141.96
20	E6_Da	NovelBoundary	0	3.07	0.00	12.58	5.87	0.00	0.00
21	E6a_E7a	KnownJunction	0	14.88	8.49	27.32	22.08	9.99	77.16
22	E6a_E8a	NovelJunction	0	0.00	0.00	0.00	2.83	0.00	10.16
23	E7a_E8a	KnownJunction	1	42.06	2.53	12.58	19.41	3.91	148.02
24	ER7a	ExonRegion	1	38.00	10.78	19.04	28.11	4.99	80.48
25	ER8a	ExonRegion	1	45.57	14.16	33.24	31.55	7.37	99.77
26	E8a_E9a	KnownJunction	1	54.41	3.04	37.06	41.54	16.90	275.21
27	ER9a	ExonRegion	1	36.86	5.19	24.31	25.86	5.99	67.17
28	E9a_E10a	KnownJunction	1	24.70	10.80	31.59	19.41	0.00	69.52
29	ER10a	ExonRegion	1	36.34	6.37	33.22	26.04	9.42	34.04
30	E10a_E11a	KnownJunction	1	47.18	3.21	31.99	16.96	32.71	106.04
31	ER11a	ExonRegion	0	33.28	12.62	40.31	39.06	11.27	43.77
32	E11a_E12a	KnownJunction	0	27.72	8.49	49.01	47.63	31.46	124.68
33	ER12a	ExonRegion	0	28.11	9.70	29.52	38.65	8.12	43.44
34	E12a_E13a	KnownJunction	1	35.79	20.87	20.09	46.11	18.23	71.45
35	ER13a	ExonRegion	0	37.51	10.24	41.41	41.96	8.91	41.18
36	E13a_E14a	KnownJunction	0	50.25	12.32	24.02	27.08	22.72	133.57
37	ER14a	ExonRegion	1	45.76	9.27	32.84	37.14	15.82	69.82
38	E14a_E15a	KnownJunction	1	33.44	3.49	33.24	31.43	33.29	160.19
39	I14_AR1	ActiveIntronRegion	0	4.30	0.00	3.87	0.00	21.74	7.84
40	E15_Aa	NovelBoundary	0	0.00	0.00	3.53	0.00	42.53	27.71
41	ER15a	ExonRegion	1	42.69	5.68	40.70	30.20	33.92	86.79
42	E15_Da	NovelBoundary	0	0.00	0.00	6.38	0.00	48.53	20.65
43	E15a_E16a	KnownJunction	0	46.34	8.89	46.22	33.71	34.88	130.97
44	E16_Aa	NovelBoundary	1	3.25	0.00	2.79	3.37	155.48	44.58
45	ER16a	ExonRegion	0	33.73	10.62	40.69	36.13	17.81	63.17
46	E16_Da	NovelBoundary	0	9.88	0.00	7.00	0.00	175.46	107.80
47	E16a_E17a	KnownJunction	1	15.97	26.15	33.76	29.85	8.16	125.26
48	E16a_E19a	NovelJunction	0	6.39	0.00	3.24	9.68	19.81	14.36
49	I16_AR1	ActiveIntronRegion	0	3.61	3.55	0.93	0.00	33.94	29.25
50	ER17a	ExonRegion	1	29.58	11.51	30.26	26.04	1.46	47.15
51	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	2.72	0.00	10.24
52	E17a_E19a	KnownJunction	1	29.59	24.64	29.77	19.14	0.00	106.04
53	I17	Intron	0	1.66	0.54	8.11	7.76	0.00	0.00
54	I17_SR1	SilentIntronRegion	0	1.66	0.55	8.13	7.78	0.00	0.00
55	ER18a	ExonRegion	0	2.20	3.40	4.44	2.39	0.00	3.82
56	E18a_E19a	KnownJunction	0	3.19	0.00	2.85	0.00	0.00	14.94
57	ER19a	ExonRegion	0	40.74	21.66	57.76	34.65	6.08	41.36
58	E19a_E20a	KnownJunction	0	82.49	30.93	59.77	49.91	27.05	90.59
59	ER20a	ExonRegion	0	62.93	23.36	62.35	74.27	14.91	91.98
60	E20a_E21a	KnownJunction	1	46.34	44.77	38.14	61.60	18.81	212.49
61	ER21a	ExonRegion	1	64.71	25.11	64.06	64.77	24.81	183.99
62	E21a_E22a	KnownJunction	1	23.14	19.07	25.90	28.06	50.61	538.41
63	ER22a	ExonRegion	1	41.23	10.98	34.38	32.26	35.29	245.59
64	E22a_E23a	KnownJunction	0	30.73	12.82	31.94	39.80	72.25	543.28
65	E22a_E24a	NovelJunction	0	0.00	0.00	0.00	0.00	8.49	11.17
66	ER23a	ExonRegion	1	35.44	16.24	27.38	34.49	31.37	232.87
67	E23a_E24a	KnownJunction	0	47.06	32.00	36.94	46.05	87.40	410.21
68	ER24a	ExonRegion	1	68.34	27.19	47.29	51.62	17.55	113.41
69	E24a_E25a	KnownJunction	0	86.05	33.47	61.93	54.86	20.31	147.93
70	ER25a	ExonRegion	0	61.83	24.01	55.31	34.93	10.90	45.45
71	E25_Da	NovelBoundary	1	17.23	0.00	3.07	0.00	63.84	9.49
72	E25a_E26a	KnownJunction	0	16.27	16.48	26.47	6.09	16.15	17.63
73	I25	Intron	0	1.21	0.27	14.80	3.31	1.11	0.73
74	I25_SR1	SilentIntronRegion	0	0.97	0.16	15.27	2.32	1.81	0.85
75	I25_AR1	ActiveIntronRegion	0	1.52	0.43	14.22	4.65	0.19	0.57
76	E26_Aa	NovelBoundary	0	13.50	7.20	26.87	8.81	0.00	3.78
77	ER26a	ExonRegion	0	18.41	11.56	67.07	41.81	4.81	12.26
78	E26a_E27a	KnownJunction	0	16.27	14.40	62.39	50.46	9.57	25.10
79	I26_AR3	ActiveIntronRegion	1	50.67	0.00	0.00	0.00	0.00	0.00
80	ER27a	ExonRegion	0	19.81	13.52	53.77	42.49	6.47	9.44
81	E27a_E28a	KnownJunction	0	18.50	2.42	43.55	21.21	0.00	12.17
82	ER28a	ExonRegion	0	16.22	16.80	46.91	42.46	0.67	6.16
83	E28a_E29a	KnownJunction	1	10.61	9.62	20.38	44.53	0.00	9.40
84	ER29a	ExonRegion	0	17.96	12.01	33.72	37.56	0.90	4.99
85	E29a_E30a	KnownJunction	0	20.67	13.50	24.82	14.74	0.00	8.98
86	E29a_E31a	NovelJunction	0	0.00	0.00	0.00	6.74	0.00	0.00
87	ER30a	ExonRegion	0	21.66	8.27	26.85	25.91	1.44	2.03
88	E30a_E31a	KnownJunction	1	29.89	0.00	26.53	46.11	8.91	4.20
89	ER31a	ExonRegion	0	24.70	8.94	53.56	47.03	2.54	21.13
90	E31a_E32a	KnownJunction	1	20.31	22.72	46.17	91.51	5.08	40.55
91	ER32a	ExonRegion	1	24.77	9.48	41.84	52.54	0.33	15.36
92	E32a_E33a	KnownJunction	0	35.37	12.15	66.49	49.81	0.00	13.27
93	E33_Aa	NovelBoundary	0	0.00	0.00	12.41	6.63	0.00	4.20
94	ER33a	ExonRegion	1	36.89	5.00	42.24	37.18	1.59	8.81
95	E33a_E34a	KnownJunction	1	24.34	0.00	25.56	17.78	4.16	31.06
96	ER34a	ExonRegion	1	40.46	12.48	47.78	33.06	2.44	29.58
97	E34a_E35a	KnownJunction	0	37.60	9.90	28.18	9.13	23.31	126.10
98	ER35a	ExonRegion	1	35.73	10.00	41.36	37.97	4.52	35.93
99	E35a_E36a	KnownJunction	0	42.72	21.15	29.26	39.69	13.48	30.56
100	ER36a	ExonRegion	0	30.32	23.70	29.33	26.05	5.26	21.51
101	E36a_E37a	KnownJunction	0	34.23	18.73	60.85	24.20	4.83	41.89
102	E37_Aa	NovelBoundary	0	0.00	0.00	13.21	5.87	0.00	0.00
103	ER37a	ExonRegion	0	33.00	18.50	26.85	24.49	6.96	27.18
104	E37a_E38a	KnownJunction	0	34.47	27.17	28.92	41.54	23.39	77.83
105	ER38a	ExonRegion	0	42.89	30.85	52.56	38.04	8.00	30.04
106	E38a_E39a	KnownJunction	0	37.06	34.37	48.39	29.52	14.98	89.83
107	ER39a	ExonRegion	0	36.67	22.90	30.30	18.01	8.63	48.45
108	E39a_E40a	KnownJunction	0	39.53	28.07	41.61	22.95	40.79	121.65
109	ER40a	ExonRegion	0	40.90	17.54	28.68	23.17	9.15	31.29
110	E40a_E41a	KnownJunction	0	62.18	26.83	46.74	12.29	7.66	8.90
111	ER41a	ExonRegion	0	72.71	28.51	43.68	23.54	7.70	22.47
112	E41a_E42a	KnownJunction	0	94.36	33.30	49.87	21.15	37.62	87.90
113	ER42a	ExonRegion	0	69.20	33.41	35.52	25.30	13.11	72.31
114	E42a_E43a	KnownJunction	1	74.72	12.26	48.27	29.52	31.63	89.16
115	ER43a	ExonRegion	0	48.56	15.71	30.61	16.35	20.19	61.92
116	E43a_E44a	KnownJunction	0	25.73	19.24	31.65	8.16	44.86	31.23
117	E44_Aa	NovelBoundary	0	0.00	2.36	14.80	2.83	0.00	0.00
118	ER44a	ExonRegion	0	46.84	11.41	26.39	10.25	33.40	34.67
119	E44a_E45a	KnownJunction	0	40.91	9.56	26.87	23.49	60.10	44.16
120	ER45a	ExonRegion	0	40.55	16.31	17.80	12.19	38.88	45.18
121	E45a_E46a	KnownJunction	0	49.65	24.13	16.00	11.47	78.91	84.96
122	ER46a	ExonRegion	0	61.03	20.15	23.67	24.02	43.99	49.17
123	E46a_E47a	KnownJunction	1	68.99	12.15	26.53	29.04	105.13	92.02
124	ER47a	ExonRegion	0	75.50	21.38	30.48	29.57	58.14	39.95
125	E47a_E48a	KnownJunction	1	51.40	18.00	20.72	28.76	156.82	58.35
126	ER48a	ExonRegion	0	81.04	33.00	27.04	27.58	58.91	33.73
127	E48a_E49a	KnownJunction	0	113.46	69.74	14.86	11.64	85.15	43.57
128	ER49a	ExonRegion	0	88.68	44.58	21.06	14.06	62.10	47.96
129	E49a_E50a	KnownJunction	0	118.40	61.76	19.64	8.75	130.18	102.85
130	ER50a	ExonRegion	0	115.08	51.65	17.82	7.48	62.04	54.96
131	E50a_E51a	KnownJunction	0	123.16	53.77	16.28	5.93	106.21	96.21
132	E50a_E52a	NovelJunction	0	13.86	0.00	2.68	0.00	9.66	12.85
133	ER51a	ExonRegion	0	95.64	41.89	15.24	2.94	76.35	58.49
134	E51_Da	NovelBoundary	0	0.00	0.00	9.22	0.00	13.82	4.11
135	E51a_E52a	KnownJunction	0	122.80	77.79	13.83	0.00	181.79	177.40
136	E52_Aa	NovelBoundary	1	28.56	0.00	9.17	5.98	30.30	16.88
137	ER52a	ExonRegion	0	92.05	55.96	12.99	8.39	80.37	90.36
138	E52a_E53a	KnownJunction	0	114.67	38.70	13.04	2.72	157.90	99.24
139	ER53a	ExonRegion	0	124.44	52.15	22.59	9.42	138.36	81.92
140	E53a_E54a	KnownJunction	0	126.48	72.84	15.31	6.31	283.67	166.65
141	E54_Aa	NovelBoundary	1	119.01	18.50	8.48	0.00	361.41	134.92
142	ER54a	ExonRegion	0	27.92	11.10	4.23	1.39	37.11	17.53