Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	LRRK2	Gene	0	12.28	5.08	25.78	12.85	20.60	10.46
2	416796	Transcript	0	0.00	0.00	0.04	0.00	0.00	0.00
3	457959	Transcript	0	0	0	0	0	0	0
4	343742	Transcript	0	0.00	0.00	4.43	1.97	0.00	0.00
5	298910	Transcript	0	0	0	0	0	0	0
6	474202	Transcript	0	0.31	0.00	0.00	0.00	0.00	0.00
7	430804	Transcript	0	0.21	0.00	0.66	0.00	0.00	0.00
8	479187	Transcript	0	5.33	1.48	6.23	4.39	4.19	3.88
9	481256	Transcript	0	0.00	0.00	0.86	1.68	0.00	0.00
10	446130	Transcript	0	0	0	0	0	0	0
11	ER1a	ExonRegion	0	0.00	0.00	0.14	0.00	0.00	0.00
12	Ix_AR3	ActiveIntronRegion	0	4.86	1.41	1.81	1.79	24.65	13.62
13	ER2a	ExonRegion	0	1.12	1.56	2.72	1.75	0.00	0.00
14	E2_Ab	KnownBoundary	0	5.66	6.07	9.68	6.09	0.00	0.00
15	ER2b	ExonRegion	0	3.04	2.56	16.24	9.27	1.37	0.00
16	E2a_E3a	KnownJunction	0	3.74	9.51	42.52	11.09	9.91	0.00
17	ER3a	ExonRegion	0	3.60	3.85	32.53	7.30	2.95	0.00
18	E3_Ab	KnownBoundary	0	3.43	0.00	25.16	9.19	0.00	0.00
19	ER3b	ExonRegion	0	2.30	0.00	17.57	8.38	1.37	0.04
20	E3a_E4a	KnownJunction	0	0.00	0.00	12.18	12.67	4.16	0.00
21	I3_AR6	ActiveIntronRegion	0	0.00	0.00	10.55	0.00	0.00	0.00
22	ER4a	ExonRegion	1	5.76	1.40	42.48	8.26	6.94	2.26
23	E4_Da	KnownBoundary	0	7.29	0.00	0.00	0.00	0.00	0.00
24	E4a_E5a	KnownJunction	1	2.77	0.00	56.93	5.60	0.00	4.03
25	ER4b	ExonRegion	0	0.31	0.00	0.00	0.00	0.00	0.00
26	ER5a	ExonRegion	1	1.78	0.05	50.38	10.07	1.99	1.23
27	E5_Da	NovelBoundary	0	0.00	0.00	8.54	0.00	4.83	14.27
28	E5a_E6a	KnownJunction	0	3.43	0.00	41.44	23.87	8.57	5.21
29	ER6a	ExonRegion	1	3.86	0.85	65.84	10.07	2.85	1.19
30	E6a_E7a	KnownJunction	0	0.00	2.92	53.51	14.95	10.32	4.53
31	E6a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
32	ER7a	ExonRegion	0	3.22	0.32	33.57	11.06	1.96	0.71
33	E7a_E8a	KnownJunction	0	3.62	0.00	27.89	5.49	0.00	5.04
34	I7_SR1	SilentIntronRegion	0	4.87	1.55	3.96	1.90	22.06	6.88
35	I7_AR1	ActiveIntronRegion	0	38.46	9.13	9.10	1.88	180.20	46.00
36	E8_Aa	NovelBoundary	0	9.22	0.00	9.11	3.15	0.00	0.00
37	ER8a	ExonRegion	0	11.93	3.59	45.10	15.08	1.07	4.81
38	E8_Da	NovelBoundary	0	6.63	0.00	0.00	0.00	8.24	38.62
39	E8a_E9a	KnownJunction	0	14.16	0.00	72.12	28.98	0.00	0.00
40	E9_Aa	NovelBoundary	0	0.00	0.00	13.38	0.00	0.00	0.00
41	ER9a	ExonRegion	0	6.03	1.32	65.08	26.93	0.00	0.12
42	E9a_E10a	KnownJunction	0	3.13	2.87	33.42	8.32	0.00	0.00
43	E9a_E12b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
44	ER10a	ExonRegion	0	6.51	1.23	72.33	26.15	1.88	0.00
45	E10a_E11a	KnownJunction	0	3.01	0.00	33.02	9.46	0.00	0.00
46	E11_Aa	NovelBoundary	0	0.00	0.00	8.99	0.00	0.00	0.00
47	ER11a	ExonRegion	1	0.50	2.39	38.89	7.81	0.07	0.00
48	E11a_E12a	KnownJunction	1	0.00	3.15	37.46	3.37	4.66	0.00
49	E12_Aa	NovelBoundary	0	0.00	0.00	10.59	3.37	0.00	0.00
50	ER12a	ExonRegion	1	1.55	1.89	41.12	6.35	1.42	0.00
51	E12_Ab	KnownBoundary	0	3.74	0.00	63.19	15.50	5.16	0.00
52	ER12b	ExonRegion	0	2.32	0.00	44.26	18.08	2.48	0.00
53	E12a_E13a	KnownJunction	0	3.13	0.00	30.63	18.38	5.16	0.00
54	E12a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
55	E13_Aa	NovelBoundary	0	0.00	8.94	15.77	11.20	5.16	0.00
56	ER13a	ExonRegion	0	1.72	2.11	40.39	9.30	2.64	1.08
57	E13_Da	NovelBoundary	0	0.00	0.00	10.47	9.79	5.08	0.00
58	E13a_E14a	KnownJunction	1	3.31	10.46	72.07	3.04	0.00	0.00
59	ER14a	ExonRegion	0	1.71	2.86	23.81	7.12	1.61	0.00
60	E14a_E15a	KnownJunction	0	0.00	0.00	17.36	2.77	8.57	0.00
61	ER15a	ExonRegion	1	1.42	0.00	26.82	4.27	0.66	1.25
62	E15a_E16a	KnownJunction	0	0.00	0.00	35.29	6.36	0.00	0.00
63	ER16a	ExonRegion	0	0.12	0.00	28.26	6.54	0.00	0.00
64	E16a_E17a	KnownJunction	0	0.00	0.00	29.72	5.22	0.00	0.00
65	ER17a	ExonRegion	0	1.03	0.00	28.29	14.73	0.00	0.00
66	E17a_E18a	KnownJunction	0	0.00	0.00	22.20	8.32	0.00	0.00
67	ER18a	ExonRegion	0	1.24	0.00	24.81	12.73	1.54	0.00
68	E18a_E19a	KnownJunction	0	0.00	0.00	24.14	17.07	5.16	0.00
69	ER19a	ExonRegion	0	0.77	0.00	31.72	15.21	2.51	0.71
70	E19a_E20a	KnownJunction	0	2.71	0.00	27.72	9.84	5.16	3.69
71	ER20a	ExonRegion	0	0.38	0.00	33.51	11.21	1.37	2.59
72	E20_Da	KnownBoundary	0	0.00	0.00	43.60	24.14	4.74	4.53
73	ER20b	ExonRegion	0	2.25	0.00	30.03	19.86	3.13	4.34
74	E20b_E21a	KnownJunction	0	3.74	0.00	24.65	22.13	5.16	7.98
75	ER21a	ExonRegion	0	5.44	0.00	64.84	28.16	5.20	9.40
76	E21_Da	NovelBoundary	0	0.00	0.00	13.32	2.34	0.00	0.00
77	E21a_E22a	KnownJunction	1	5.54	0.00	39.45	2.83	4.99	5.21
78	ER22a	ExonRegion	0	4.05	0.00	83.67	38.34	2.87	6.80
79	E22a_E23a	KnownJunction	0	0.00	0.00	26.47	14.52	13.40	13.52
80	E23_Aa	NovelBoundary	0	0.00	0.00	0.00	6.31	0.00	0.00
81	ER23a	ExonRegion	0	0.12	0.00	38.21	15.82	1.76	1.48
82	E23a_E24a	KnownJunction	0	0.00	0.00	55.39	22.02	0.00	0.00
83	ER24a	ExonRegion	0	0.00	0.00	24.61	20.59	0.41	0.61
84	E24_Ab	KnownBoundary	0	0.00	0.00	15.94	11.80	4.00	4.70
85	ER24b	ExonRegion	0	1.55	0.00	33.88	18.55	1.74	0.89
86	E24_Da	NovelBoundary	0	0.00	0.00	11.56	2.66	4.83	0.00
87	E24a_E25a	KnownJunction	0	3.43	0.00	20.32	10.44	0.00	4.03
88	E25_Aa	NovelBoundary	0	3.74	0.00	2.73	0.00	4.08	19.31
89	ER25a	ExonRegion	0	1.51	0.00	42.81	18.27	0.00	1.20
90	E25a_E26a	KnownJunction	1	2.77	0.00	50.61	6.47	0.00	5.21
91	ER25b	ExonRegion	1	2.11	0.00	43.45	7.90	0.00	1.85
92	ER26a	ExonRegion	1	2.32	0.00	54.01	6.72	0.00	1.43
93	E26_Da	NovelBoundary	0	0.00	0.00	10.08	3.21	0.00	14.27
94	E26a_E27a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
95	E26a_E28a	KnownJunction	1	2.65	0.00	50.89	0.00	0.00	0.00
96	E27_Aa	NovelBoundary	0	0.00	0.00	10.13	2.83	0.00	0.00
97	ER27a	ExonRegion	0	0.64	0.00	1.97	0.00	0.00	0.00
98	E27_Da	NovelBoundary	0	3.74	0.00	12.41	6.74	3.91	0.00
99	E27a_E28a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
100	ER28a	ExonRegion	1	2.79	0.00	37.86	7.93	0.00	0.00
101	E28a_E29a	KnownJunction	1	6.45	0.00	52.37	11.53	0.00	0.00
102	ER29a	ExonRegion	0	2.51	0.00	34.64	11.99	0.00	0.00
103	E29_Da	KnownBoundary	0	3.74	2.59	0.00	0.00	0.00	0.00
104	E29a_E30a	KnownJunction	0	0.00	0.00	16.17	8.43	0.00	0.00
105	E29a_E31a	NovelJunction	0	0.00	0.00	12.98	13.43	0.00	0.00
106	ER29b	ExonRegion	0	2.00	0.00	1.84	1.49	0.00	0.00
107	E29_Db	KnownBoundary	0	0.00	0.00	3.53	3.15	0.00	0.00
108	ER29c	ExonRegion	0	0.00	0.00	4.43	1.97	0.00	0.00
109	ER30a	ExonRegion	0	1.36	0.00	28.21	18.65	0.00	0.26
110	E30a_E31a	KnownJunction	0	3.74	2.59	45.83	35.45	0.00	4.79
111	ER31a	ExonRegion	0	1.83	0.69	40.55	19.40	0.00	1.01
112	E31a_E32a	KnownJunction	0	6.81	0.00	43.83	17.89	0.00	0.00
113	ER32a	ExonRegion	0	1.78	0.80	14.32	9.98	0.00	1.10
114	E32a_E33a	KnownJunction	0	3.74	3.26	12.30	15.28	0.00	0.00
115	ER33a	ExonRegion	0	1.63	2.53	47.12	27.47	0.00	0.64
116	E33a_E35a	KnownJunction	0	3.37	0.00	71.61	37.52	0.00	0.00
117	E34_Aa	NovelBoundary	0	0.00	0.00	3.30	8.65	0.00	0.00
118	ER34a	ExonRegion	0	0.00	0.00	1.73	3.37	0.00	0.00
119	E34a_E35a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
120	ER35a	ExonRegion	0	2.91	7.18	98.78	60.57	0.00	0.70
121	E35a_E36a	KnownJunction	0	6.21	16.42	122.28	87.70	0.00	0.00
122	E36_Aa	NovelBoundary	0	0.00	0.00	12.69	0.00	0.00	0.00
123	ER36a	ExonRegion	0	1.92	7.66	72.82	49.91	0.00	1.77
124	E36_Da	NovelBoundary	0	0.00	0.00	6.20	11.96	0.00	0.00
125	E36a_E37a	KnownJunction	0	3.74	13.16	56.70	30.83	0.00	0.00
126	E37_Aa	NovelBoundary	0	0.00	0.00	13.38	0.00	0.00	4.95
127	ER37a	ExonRegion	0	1.83	4.93	37.05	19.99	1.45	3.53
128	E37_Da	KnownBoundary	0	3.62	0.00	19.87	17.67	3.58	0.00
129	ER37b	ExonRegion	0	3.17	0.00	20.51	19.54	0.41	0.79
130	E37_Ab	KnownBoundary	0	3.01	0.00	38.65	24.30	0.00	4.70
131	ER37c	ExonRegion	0	1.28	0.00	29.86	15.68	1.30	5.55
132	E37b_E38a	KnownJunction	0	0.00	0.00	37.91	10.60	7.57	13.85
133	E38_Aa	NovelBoundary	0	0.00	0.00	4.78	6.47	13.90	9.32
134	ER38a	ExonRegion	0	2.83	2.04	20.76	19.76	12.73	6.86
135	E38_Da	NovelBoundary	0	2.65	0.00	0.00	8.65	5.16	0.00
136	E38a_E39a	KnownJunction	0	6.81	0.00	28.01	14.14	27.38	4.70
137	I38	Intron	0	0.25	0.00	1.26	1.50	9.65	7.53
138	I38_AR1	ActiveIntronRegion	0	0.00	0.00	1.25	3.10	14.04	10.59
139	E39_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	163.97	68.68
140	ER39a	ExonRegion	0	1.35	9.86	30.49	26.77	15.80	9.91
141	E39_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	168.14	116.53
142	E39a_E40a	KnownJunction	0	0.00	17.44	37.51	26.32	4.16	0.00
143	ER40a	ExonRegion	0	4.15	10.43	42.73	37.31	2.31	0.73
144	E40a_E41a	KnownJunction	0	11.99	6.02	40.53	52.20	0.00	0.00
145	ER41a	ExonRegion	0	4.34	3.58	41.37	31.89	3.78	0.00
146	E41a_E42a	KnownJunction	0	0.00	6.97	29.03	18.16	0.00	0.00
147	ER42a	ExonRegion	0	9.64	2.74	24.80	21.50	2.74	0.00
148	E42a_E43a	KnownJunction	0	9.22	3.26	49.18	33.82	10.07	0.00
149	I42_AR1	ActiveIntronRegion	0	1.07	0.00	6.60	0.55	13.91	11.76
150	I42_SR2	SilentIntronRegion	0	11.31	1.90	7.43	3.36	59.05	17.00
151	E43_Aa	NovelBoundary	0	6.81	0.00	22.49	2.56	0.00	0.00
152	ER43a	ExonRegion	0	7.97	10.71	33.73	21.52	2.21	0.00
153	E43a_E44a	KnownJunction	0	10.12	20.81	70.19	40.18	7.82	0.00
154	E44_Aa	NovelBoundary	0	0.00	0.00	16.91	0.00	0.00	0.00
155	ER44a	ExonRegion	0	6.47	6.01	26.29	14.20	3.19	0.00
156	E44a_E45a	KnownJunction	0	9.82	0.00	29.09	15.61	9.66	0.00
157	ER45a	ExonRegion	0	4.85	2.79	26.48	13.14	3.47	0.00
158	E45a_E46a	KnownJunction	0	10.00	13.84	30.34	5.82	13.32	0.00
159	ER46a	ExonRegion	0	7.30	6.73	43.69	16.12	6.27	0.09
160	E46a_E47a	KnownJunction	0	5.97	10.46	38.82	15.33	17.56	0.00
161	ER47a	ExonRegion	0	15.65	3.90	28.76	15.12	6.45	2.57
162	E47a_E48a	KnownJunction	0	27.30	2.36	11.78	5.76	14.07	4.45
163	ER48a	ExonRegion	0	19.03	2.57	25.66	8.81	5.31	2.80
164	E48a_E49a	KnownJunction	0	31.45	3.04	33.98	7.67	17.31	9.91
165	ER49a	ExonRegion	0	27.36	10.73	48.33	15.94	6.04	7.66
166	E49a_E50a	KnownJunction	0	33.92	8.32	31.14	24.36	4.66	5.21
167	E50_Aa	NovelBoundary	0	0.00	0.00	13.09	6.42	0.00	0.00
168	ER50a	ExonRegion	0	29.65	18.38	49.98	22.51	28.06	18.98
169	E50a_E51a	KnownJunction	0	15.49	10.80	15.77	14.68	33.79	30.64
170	ER51a	ExonRegion	0	31.37	21.52	51.63	17.11	47.46	24.88
171	E51a_E52a	KnownJunction	0	40.49	21.26	72.86	29.58	118.86	25.19
172	ER52a	ExonRegion	0	41.21	21.33	52.22	24.22	52.50	15.17
173	E52_Da	KnownBoundary	0	0.00	6.36	3.19	6.04	14.57	0.00
174	E52a_E52b	KnownJunction	0	32.42	6.13	50.21	15.28	76.66	31.65
175	ER52b	ExonRegion	0	1.65	4.21	3.51	1.43	5.97	2.92
176	E52_Db	KnownBoundary	0	2.53	5.40	0.00	0.00	13.73	8.73
177	ER52c	ExonRegion	0	2.09	0.21	6.92	5.34	1.19	1.71
178	E52_Ab	KnownBoundary	0	0.00	0.00	6.60	0.00	0.00	9.24
179	ER52d	ExonRegion	0	35.77	12.82	32.71	18.57	50.88	21.98
180	E52_Dc	KnownBoundary	0	9.10	0.00	20.27	13.48	22.39	19.73
181	E52c_E52c	KnownJunction	0	58.51	26.77	16.17	15.66	106.62	22.42
182	ER52e	ExonRegion	0	8.58	2.75	5.54	3.44	7.20	6.04
183	E52_Ac	KnownBoundary	0	11.63	5.96	3.53	0.00	21.89	13.77
184	ER52f	ExonRegion	0	64.36	22.64	13.84	10.39	138.43	67.30
185	ER52g	ExonRegion	0	2.11	1.04	0.00	0.00	0.45	0.00