Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	CUGBP1	Gene	0	39.22	34.02	60.64	35.28	22.45	2.44
2	310513	Transcript	0	3.90	5.14	3.11	3.97	2.68	0.00
3	422993	Transcript	0	3.01	1.59	12.58	12.18	0.00	0.00
4	395292	Transcript	0	2.21	0.00	7.60	4.47	0.00	0.00
5	358597	Transcript	0	0	0	0	0	0	0
6	395290	Transcript	0	0	0	0	0	0	0
7	361904	Transcript	0	0	0	0	0	0	0
8	ER1a	ExonRegion	0	4.72	3.75	3.37	1.96	0.36	0.00
9	E1a_E4a	KnownJunction	0	3.07	6.52	2.85	5.98	4.99	0.00
10	I1	Intron	0	9.95	3.26	4.98	2.80	3.00	1.46
11	I1_AR1	ActiveIntronRegion	0	8.09	1.04	2.90	1.44	1.36	0.46
12	I1_AR2	ActiveIntronRegion	0	9.22	0.76	7.72	6.47	3.12	0.20
13	I1_SR3	SilentIntronRegion	0	11.13	4.16	5.26	3.23	2.43	1.28
14	I1_SR4	SilentIntronRegion	0	8.38	2.64	4.01	1.23	6.89	4.12
15	I1_AR5	ActiveIntronRegion	0	15.78	9.29	8.92	4.31	5.42	0.10
16	I1_AR7	ActiveIntronRegion	0	10.74	1.11	3.48	2.31	3.39	0.99
17	I1_AR1	ActiveIntronRegion	0	2.43	0.62	18.11	7.93	0.00	0.33
18	I1_AR3	ActiveIntronRegion	0	6.65	1.75	13.61	3.40	0.95	0.00
19	I1_AR4	ActiveIntronRegion	0	7.04	2.26	15.17	4.23	1.07	0.07
20	I1_SR6	SilentIntronRegion	0	16.16	10.39	12.00	4.03	5.42	1.85
21	I1_AR5	ActiveIntronRegion	0	17.42	0.00	11.08	2.26	5.42	1.85
22	I1_SR7	SilentIntronRegion	0	10.75	4.72	3.90	4.84	6.71	6.31
23	I1_AR6	ActiveIntronRegion	0	13.03	2.73	4.40	0.99	10.41	8.46
24	I1_SR8	SilentIntronRegion	0	9.14	5.00	4.18	0.00	13.05	37.40
25	I1_AR7	ActiveIntronRegion	0	12.61	3.20	6.91	0.62	52.75	17.12
26	I1_SR9	SilentIntronRegion	0	11.62	3.64	4.63	1.94	0.34	0.09
27	I1_AR10	ActiveIntronRegion	0	2.11	0.00	14.57	0.00	0.00	0.00
28	I1_AR11	ActiveIntronRegion	0	6.60	0.00	12.80	0.00	0.00	0.00
29	I1_SR10	SilentIntronRegion	0	8.26	4.19	10.13	5.52	0.05	0.00
30	I1_AR12	ActiveIntronRegion	0	8.18	3.17	8.58	7.92	1.81	0.00
31	I1_AR13	ActiveIntronRegion	0	1.94	0.00	19.34	5.54	12.28	7.22
32	I1_SR12	SilentIntronRegion	0	0.84	0.00	16.86	3.19	9.04	5.78
33	I1_AR14	ActiveIntronRegion	0	1.54	0.76	15.06	4.75	54.21	32.44
34	E2_Aa	NovelBoundary	0	7.11	0.00	25.39	2.72	4.08	0.00
35	ER2a	ExonRegion	0	3.78	1.35	10.37	8.86	0.00	0.00
36	E2a_E4a	KnownJunction	0	5.24	3.43	24.76	27.68	0.00	0.00
37	I2_SR1	SilentIntronRegion	0	1.26	3.58	12.61	6.38	0.00	0.00
38	I2_AR1	ActiveIntronRegion	0	1.78	0.39	10.06	7.89	0.60	1.54
39	I2_SR2	SilentIntronRegion	0	3.96	2.38	12.45	8.45	0.94	0.19
40	I2_AR2	ActiveIntronRegion	0	5.13	2.13	16.00	7.78	0.00	0.00
41	I2_AR3	ActiveIntronRegion	0	7.24	0.00	24.83	4.31	0.00	0.00
42	ER3a	ExonRegion	0	1.11	0.00	8.82	5.67	0.00	0.00
43	E3a_E4a	KnownJunction	0	3.31	0.00	6.38	3.26	0.00	0.00
44	I3	Intron	0	12.51	4.76	7.03	4.08	3.42	1.43
45	I3_SR1	SilentIntronRegion	0	10.11	4.70	9.12	6.73	1.46	0.40
46	I3_AR1	ActiveIntronRegion	0	9.74	4.98	2.00	2.38	7.34	2.39
47	I3_SR3	SilentIntronRegion	0	20.27	8.02	3.79	1.39	8.96	3.76
48	I3_AR3	ActiveIntronRegion	0	15.23	1.97	10.32	1.53	0.00	0.95
49	I3_AR4	ActiveIntronRegion	0	10.14	0.86	6.01	1.41	0.00	1.21
50	E4_Aa	NovelBoundary	0	20.07	13.78	18.27	12.07	3.58	0.00
51	ER4a	ExonRegion	0	40.07	50.50	81.21	53.49	12.02	1.14
52	E4a_E5a	KnownJunction	0	31.03	55.29	69.45	51.71	31.80	5.21
53	E5_Aa	NovelBoundary	0	9.10	0.00	0.00	3.37	0.00	8.40
54	ER5a	ExonRegion	0	53.27	72.71	121.61	102.52	21.33	1.76
55	E5a_E6a	KnownJunction	0	79.66	104.11	119.77	97.00	42.70	9.32
56	ER6a	ExonRegion	0	57.65	67.24	104.46	67.62	25.13	2.00
57	E6_Da	NovelBoundary	0	10.06	6.19	3.02	0.00	4.83	24.26
58	E6a_E7a	KnownJunction	0	45.01	44.77	91.37	57.31	44.95	4.28
59	E6a_E7b	KnownJunction	0	0.00	0.00	2.62	0.00	0.00	0.00
60	ER7a	ExonRegion	0	44.87	39.99	102.11	53.32	19.89	1.85
61	ER7b	ExonRegion	0	48.56	56.89	119.04	69.33	16.31	0.73
62	E7a_E8a	KnownJunction	0	50.19	29.87	54.88	53.29	42.95	0.00
63	ER8a	ExonRegion	0	57.82	30.64	139.28	71.98	17.38	0.00
64	E8a_E9a	KnownJunction	0	88.82	33.75	191.27	86.73	0.00	0.00
65	ER9a	ExonRegion	1	75.67	28.42	110.32	65.72	24.99	0.39
66	E9_Da	NovelBoundary	0	24.34	3.49	33.93	12.61	3.66	0.00
67	E9a_E10a	KnownJunction	0	57.24	31.22	225.31	89.33	69.17	5.21
68	E9a_E10b	KnownJunction	0	3.74	17.38	19.18	12.67	14.40	0.00
69	I9	Intron	0	44.15	12.35	12.98	4.54	23.99	7.28
70	I9_AR1	ActiveIntronRegion	0	34.23	6.93	13.12	5.46	3.06	0.22
71	I9_SR1	SilentIntronRegion	0	44.64	16.53	15.87	3.50	11.22	2.27
72	I9_AR2	ActiveIntronRegion	0	96.82	32.89	14.08	6.77	117.21	33.91
73	I9_SR2	SilentIntronRegion	1	67.97	13.16	8.90	2.36	14.27	4.39
74	I9_AR3	ActiveIntronRegion	0	37.93	10.60	9.88	3.60	6.28	4.84
75	I9_AR4	ActiveIntronRegion	0	20.26	3.31	16.74	6.04	0.45	0.00
76	E10_Ab	NovelBoundary	0	34.77	19.35	110.55	45.78	25.05	3.53
77	ER10a	ExonRegion	0	45.47	31.80	185.00	71.42	31.43	1.85
78	ER10b	ExonRegion	0	41.49	49.89	131.80	46.47	30.16	2.41
79	E10a_E11a	KnownJunction	0	36.33	55.96	55.67	11.96	50.36	8.82
80	I10	Intron	0	10.06	5.33	25.38	10.83	1.04	0.10
81	I10_AR1	ActiveIntronRegion	0	10.08	5.34	25.42	10.85	1.04	0.10
82	E11_Aa	NovelBoundary	0	16.33	3.15	23.23	12.51	7.49	0.00
83	ER11a	ExonRegion	1	38.40	46.03	102.21	27.30	28.91	3.49
84	E11a_E12a	KnownJunction	1	20.43	16.93	94.33	16.26	22.39	0.00
85	E11a_E12b	KnownJunction	0	43.26	51.41	52.09	13.05	45.70	0.00
86	I11	Intron	0	11.90	0.00	8.33	4.37	9.38	1.25
87	I11_SR1	SilentIntronRegion	0	14.10	0.00	10.17	5.80	13.28	1.64
88	I11_AR2	ActiveIntronRegion	0	13.03	0.00	8.99	3.58	7.32	1.35
89	E12_Aa	NovelBoundary	0	0.00	0.00	5.69	3.37	0.00	7.64
90	E12_Ab	NovelBoundary	0	7.23	0.00	5.92	2.45	11.57	8.65
91	ER12a	ExonRegion	1	20.59	24.93	73.32	17.77	17.63	2.31
92	ER12b	ExonRegion	1	50.40	47.56	55.95	12.73	43.31	6.45
93	E12_Da	NovelBoundary	0	10.12	2.64	6.15	3.37	30.80	3.53
94	E12a_E13a	KnownJunction	0	54.95	29.36	26.19	11.53	64.26	4.37
95	ER13a	ExonRegion	0	58.81	41.54	40.58	23.08	41.26	2.66
96	E13a_E14a	KnownJunction	0	87.49	53.38	95.92	61.71	113.03	17.80
97	I13_SR1	SilentIntronRegion	0	6.56	2.06	1.86	0.89	9.57	1.99
98	E14_Aa	NovelBoundary	0	16.63	0.00	11.10	0.00	0.00	0.00
99	ER14a	ExonRegion	0	79.42	57.80	91.11	58.43	79.26	11.62
100	E14a_E15a	KnownJunction	0	134.25	72.95	145.39	79.17	125.52	31.99
101	ER15a	ExonRegion	0	94.16	70.67	98.47	70.11	66.31	10.61
102	E15_Da	NovelBoundary	0	10.30	3.26	17.08	11.74	23.14	4.11
103	E15a_E16a	KnownJunction	1	23.14	42.69	3.13	24.69	0.00	0.00
104	I15	Intron	0	303.32	122.66	79.68	47.11	3.37	0.18
105	I15_AR1	ActiveIntronRegion	0	303.71	122.81	79.78	47.17	3.37	0.18
106	E16_Aa	NovelBoundary	1	231.74	52.42	73.09	30.34	20.64	3.78
107	ER16a	ExonRegion	0	7.18	10.94	1.54	4.94	0.55	0.00