Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	PTPRE	Gene	0	26.15	12.25	13.93	10.79	52.21	31.02
2	254667	Transcript	0	2.07	2.67	1.57	0.00	6.62	5.98
3	442830	Transcript	0	0	0	0	0	0	0
4	419012	Transcript	0	0	0	0	0	0	0
5	471218	Transcript	0	0.00	0.00	0.00	0.00	0.00	1.40
6	455661	Transcript	0	1.18	0.60	4.65	3.57	24.66	16.20
7	439034	Transcript	0	2.02	0.31	1.02	0.89	10.61	1.93
8	467366	Transcript	0	0.00	0.00	0.00	0.00	11.24	8.06
9	306042	Transcript	0	0.55	0.00	0.65	0.00	0.94	0.00
10	487428	Transcript	0	0.70	0.21	2.25	4.23	2.86	2.79
11	495530	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
12	479896	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
13	430713	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
14	492479	Transcript	0	0.38	0.05	4.53	3.03	0.23	0.07
15	463727	Transcript	0	3.41	2.48	3.02	1.73	8.10	6.97
16	ER1a	ExonRegion	0	0.53	0.00	0.00	0.00	0.00	2.31
17	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
18	E1_Ac	KnownBoundary	0	3.19	3.49	0.00	0.00	0.00	0.00
19	ER1b	ExonRegion	0	2.11	0.00	0.00	0.00	0.00	3.70
20	ER1c	ExonRegion	0	1.34	1.53	1.78	0.00	2.98	4.24
21	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
22	E1a_E3a	KnownJunction	0	3.62	5.34	3.13	0.00	13.23	9.65
23	I1_AR2	ActiveIntronRegion	0	2.84	0.47	12.91	4.09	2.84	2.91
24	Ix	Intron	0	2.04	1.53	8.65	6.83	3.50	9.74
25	Ix_SR1	SilentIntronRegion	0	2.06	2.52	7.97	7.15	7.32	19.53
26	Ix_AR1	ActiveIntronRegion	0	0.96	0.30	6.02	3.76	2.06	7.01
27	Ix_AR2	ActiveIntronRegion	0	3.54	1.59	14.40	10.95	0.00	0.00
28	I1_AR3	ActiveIntronRegion	0	4.23	0.95	4.58	5.67	11.07	8.62
29	E2_Aa	NovelBoundary	0	0.00	0.00	12.13	0.00	0.00	0.00
30	ER2a	ExonRegion	0	0.00	0.00	1.93	1.91	0.00	0.01
31	E2_Da	NovelBoundary	0	0.00	0.00	9.56	2.99	0.00	0.00
32	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
33	ER3a	ExonRegion	0	3.49	6.23	4.06	0.00	12.11	4.02
34	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
35	E4_Da	NovelBoundary	0	3.74	0.00	12.92	2.83	0.00	0.00
36	E4a_E7b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
37	I4	Intron	0	5.66	3.61	7.18	5.55	14.88	8.40
38	I4_AR1	ActiveIntronRegion	0	0.92	2.51	6.02	6.96	0.26	0.00
39	I4_SR2	SilentIntronRegion	0	3.63	2.44	6.96	7.76	25.87	7.53
40	I4_AR2	ActiveIntronRegion	0	9.73	9.33	5.67	8.06	135.95	87.66
41	I4_SR3	SilentIntronRegion	0	11.23	8.29	12.31	8.89	1.01	1.43
42	E5_Aa	NovelBoundary	0	0.00	0.00	9.79	8.92	4.99	5.21
43	ER5a	ExonRegion	0	2.36	1.20	6.73	7.15	6.04	4.10
44	E5a_E7b	KnownJunction	0	0.00	0.00	2.56	0.00	43.28	28.29
45	I5_AR1	ActiveIntronRegion	0	0.00	2.31	8.88	6.78	0.58	1.00
46	I5_AR3	ActiveIntronRegion	0	8.82	3.34	6.44	2.39	0.00	1.85
47	I5_AR4	ActiveIntronRegion	0	1.12	0.52	3.23	7.14	0.00	0.00
48	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.13	0.00
49	ER7a	ExonRegion	0	2.64	1.56	1.63	1.08	9.49	4.63
50	ER7b	ExonRegion	0	6.30	8.18	15.83	6.24	28.52	26.45
51	E7_Da	NovelBoundary	0	11.03	0.00	9.45	0.00	10.15	4.70
52	E7a_E8a	KnownJunction	0	6.45	5.96	7.06	3.32	28.63	62.88
53	E8_Ab	NovelBoundary	0	6.75	6.52	0.00	0.00	15.15	38.28
54	ER8a	ExonRegion	0	2.11	3.79	6.26	2.15	14.78	28.42
55	ER8b	ExonRegion	0	3.94	4.08	7.54	1.58	104.56	76.41
56	E8a_E9f	KnownJunction	0	16.81	13.22	11.78	2.88	365.15	320.88
57	E8a_E9g	KnownJunction	0	0.00	0.00	0.00	0.00	11.24	8.06
58	E8a_E11c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
59	ER9a	ExonRegion	0	0.55	0.00	0.65	0.00	0.94	0.00
60	E9_Ab	KnownBoundary	0	0.00	0.00	3.47	0.00	0.00	0.00
61	E9_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
62	E9_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
63	E9_Ae	KnownBoundary	0	6.75	2.87	3.53	0.00	0.00	0.00
64	ER9b	ExonRegion	0	2.11	0.21	2.17	0.00	1.81	0.00
65	ER9c	ExonRegion	0	4.22	2.08	2.17	0.00	1.81	0.00
66	ER9d	ExonRegion	0	4.22	2.08	2.17	0.96	1.81	0.00
67	ER9e	ExonRegion	0	4.16	2.08	1.98	3.55	1.28	1.20
68	E9_Da	KnownBoundary	0	0.00	0.00	0.00	9.62	0.00	0.00
69	E9a_E9f	KnownJunction	0	0.00	2.92	0.00	0.00	0.00	4.45
70	ER9f	ExonRegion	0	0.70	0.21	2.25	4.23	2.86	2.79
71	E9_Af	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
72	E9_Ag	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
73	ER9g	ExonRegion	0	10.91	16.62	20.64	7.90	240.16	216.59
74	ER9h	ExonRegion	0	17.14	18.08	30.87	17.81	211.51	301.03
75	E9_Db	NovelBoundary	0	7.47	2.76	3.30	8.81	0.00	0.00
76	E9b_E11a	KnownJunction	1	18.26	14.23	28.41	13.76	210.84	567.71
77	E9b_E11b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	4.20
78	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
79	E11_Ab	NovelBoundary	0	0.00	0.00	0.00	6.31	0.00	0.00
80	ER11a	ExonRegion	1	14.08	12.47	28.60	21.90	107.88	245.59
81	E11_Ac	KnownBoundary	1	8.32	19.18	28.29	15.88	90.31	236.84
82	ER11b	ExonRegion	1	9.12	13.58	22.66	14.77	74.32	208.79
83	ER11c	ExonRegion	0	9.15	23.66	17.50	11.64	75.86	137.66
84	E11_Da	NovelBoundary	0	15.91	16.25	28.41	13.27	269.18	437.08
85	E11_Db	NovelBoundary	0	3.49	0.00	2.50	5.27	0.00	0.00
86	E11b_E12a	KnownJunction	0	26.09	24.35	46.45	16.15	638.50	844.01
87	ER11d	ExonRegion	0	17.16	18.90	31.68	12.23	250.96	356.57
88	I11_AR1	ActiveIntronRegion	0	4.72	4.09	8.17	7.28	0.73	0.38
89	E12_Aa	NovelBoundary	0	0.00	3.37	13.89	6.47	15.32	45.42
90	ER12a	ExonRegion	0	28.63	33.85	58.18	25.33	185.39	258.00
91	E12_Da	KnownBoundary	0	17.23	9.96	39.73	15.77	14.90	11.59
92	E12_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
93	E12_Dc	KnownBoundary	0	10.42	26.72	25.62	10.60	4.33	4.28
94	ER12b	ExonRegion	0	25.03	38.58	59.28	32.93	15.76	16.66
95	ER12c	ExonRegion	0	23.22	37.40	60.83	34.47	5.42	5.55
96	ER12d	ExonRegion	1	16.04	41.80	58.14	34.57	4.65	13.00
97	E12d_E13a	KnownJunction	1	0.00	13.56	30.85	27.13	12.65	90.25
98	E12d_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
99	E13_Aa	NovelBoundary	0	0.00	0.00	12.81	2.28	0.00	3.44
100	ER13a	ExonRegion	1	9.35	11.63	27.65	16.00	3.24	20.96
101	E13a_E14a	KnownJunction	0	26.39	16.25	31.71	7.99	0.00	19.81
102	E14_Aa	NovelBoundary	0	0.00	0.00	9.73	0.00	0.00	9.99
103	ER14a	ExonRegion	0	21.97	10.50	36.23	22.65	3.62	8.06
104	E14a_E15b	KnownJunction	0	23.02	5.57	43.43	40.29	9.41	8.14
105	ER15a	ExonRegion	0	0.38	0.05	4.53	3.03	0.23	0.07
106	E15_Ab	KnownBoundary	0	3.01	0.00	8.54	2.56	4.08	0.00
107	ER15b	ExonRegion	0	14.89	12.19	39.96	39.04	7.74	14.75
108	E15_Da	NovelBoundary	0	3.68	0.00	5.98	9.52	0.00	0.00
109	E15a_E16a	KnownJunction	0	16.99	0.00	26.24	21.64	0.00	0.00
110	ER16a	ExonRegion	0	14.96	6.39	26.29	20.50	0.00	0.00
111	E16_Da	NovelBoundary	0	0.00	0.00	0.00	6.36	0.00	0.00
112	E16a_E17a	KnownJunction	0	8.98	5.57	28.52	20.72	0.00	0.00
113	ER17a	ExonRegion	0	12.24	5.52	12.35	11.95	0.97	0.00
114	E17_Da	NovelBoundary	0	0.00	3.21	3.24	5.65	0.00	0.00
115	E17a_E18b	KnownJunction	0	6.33	3.21	18.67	2.94	3.58	0.00
116	ER18a	ExonRegion	0	2.45	1.69	3.78	3.38	0.00	0.64
117	E18_Ab	KnownBoundary	0	0.00	0.00	9.62	0.00	0.00	0.00
118	ER18b	ExonRegion	0	17.72	4.34	24.14	10.69	1.71	0.00
119	E18_Da	KnownBoundary	0	6.39	0.00	17.99	0.00	0.00	0.00
120	E18a_E18c	KnownJunction	0	6.93	21.43	27.72	5.49	4.33	0.00
121	ER18c	ExonRegion	0	2.74	0.65	2.63	1.01	0.01	0.00
122	E18_Ac	KnownBoundary	0	6.75	0.00	0.00	0.00	0.00	0.00
123	ER18d	ExonRegion	0	15.89	9.21	28.54	18.31	4.96	0.00
124	E18_Db	KnownBoundary	1	43.81	2.92	30.28	26.91	5.16	0.00
125	ER18e	ExonRegion	1	31.59	3.13	20.22	21.00	4.46	0.00
126	E18c_E19a	KnownJunction	0	44.41	10.41	31.02	33.87	21.72	0.00
127	ER19a	ExonRegion	0	37.51	12.47	29.26	39.09	8.61	0.00
128	E19_Da	KnownBoundary	0	38.14	19.57	34.67	50.62	13.40	0.00
129	ER19b	ExonRegion	1	22.84	7.72	27.34	22.08	12.26	0.00
130	E19_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	5.08	0.00
131	E19b_E19b	KnownJunction	1	21.75	5.91	23.97	12.02	38.45	0.00
132	ER19c	ExonRegion	0	1.70	1.13	0.00	1.69	0.92	0.58
133	E19_Dc	KnownBoundary	0	0.00	0.00	0.00	3.10	0.00	5.21
134	E19c_E19b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
135	ER19d	ExonRegion	0	2.37	3.20	2.48	1.81	7.99	7.25
136	E19_Ab	KnownBoundary	0	6.57	0.00	9.05	0.00	27.05	19.31
137	ER19e	ExonRegion	1	47.95	13.04	27.99	30.50	29.02	4.80
138	E19_Dd	KnownBoundary	0	9.58	0.00	0.00	0.00	15.48	5.21
139	E19d_E20a	KnownJunction	1	67.97	19.52	45.65	75.03	19.81	0.00
140	ER19f	ExonRegion	0	6.07	4.39	3.18	0.70	24.40	19.98
141	E19_De	NovelBoundary	0	5.60	8.89	0.00	2.66	0.00	0.00
142	E20_Aa	NovelBoundary	0	0.00	6.30	0.00	3.37	0.00	0.00
143	ER20a	ExonRegion	1	32.26	8.11	21.68	24.75	15.05	1.45
144	E20a_E21a	KnownJunction	0	25.79	15.58	21.01	11.96	32.21	5.12
145	ER21a	ExonRegion	1	24.11	11.87	27.90	16.76	12.33	0.68
146	E21a_E22a	KnownJunction	0	22.72	3.49	15.60	12.45	22.39	0.00
147	ER22a	ExonRegion	0	26.04	12.78	24.14	10.64	10.93	2.53
148	E22a_E23a	KnownJunction	1	29.28	0.00	18.44	5.65	48.69	0.00
149	E22a_E24a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
150	ER23a	ExonRegion	0	23.99	5.39	26.07	12.70	20.53	4.94
151	E23_Da	NovelBoundary	0	0.00	0.00	0.00	6.25	0.00	0.00
152	E23a_E24a	KnownJunction	0	19.94	8.44	26.75	9.68	9.16	12.76
153	ER24a	ExonRegion	0	21.40	4.54	32.81	15.42	39.78	19.24
154	E24_Da	KnownBoundary	0	12.23	3.37	14.40	9.30	145.50	119.05
155	E24a_E24b	KnownJunction	1	7.47	0.00	3.47	3.37	43.45	5.04
156	ER24b	ExonRegion	0	23.27	9.20	31.37	23.82	96.22	55.49
157	E24_Db	KnownBoundary	0	36.03	9.11	29.94	9.08	30.63	7.72
158	ER24c	ExonRegion	0	64.96	23.74	29.48	23.09	43.25	16.18
159	E24_Ab	KnownBoundary	1	142.45	45.33	47.65	43.39	224.07	72.87
160	ER24d	ExonRegion	1	111.10	75.74	33.20	27.10	128.93	35.53
161	E24_Dc	KnownBoundary	1	82.01	42.92	5.29	19.08	431.99	123.42
162	ER24e	ExonRegion	0	213.93	98.72	14.21	13.68	514.15	265.00