Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	VTI1A	Gene	0	9.08	8.09	23.11	14.25	11.80	10.49
2	483122	Transcript	0	2.54	1.25	1.20	0.37	3.82	2.13
3	472892	Transcript	0	3.74	0.00	3.47	0.00	4.08	0.00
4	489142	Transcript	0	5.71	3.43	0.77	1.01	25.31	29.20
5	369399	Transcript	0	0	0	0	0	0	0
6	432306	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
7	393077	Transcript	0	9.46	7.29	37.02	32.57	6.38	4.72
8	496445	Transcript	0	0.51	4.33	11.87	13.15	19.04	9.58
9	494728	Transcript	0	0.00	0.00	3.89	0.00	0.00	2.02
10	489357	Transcript	0	1.46	0.40	75.65	53.63	17.29	6.89
11	480057	Transcript	0	0.00	0.00	1.57	0.90	0.00	0.00
12	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
13	ER1b	ExonRegion	0	1.48	0.00	3.98	1.87	0.00	0.00
14	E1_Ac	KnownBoundary	0	0.00	0.00	7.06	5.65	0.00	0.00
15	E1_Ad	KnownBoundary	1	0.00	0.00	20.83	0.00	0.00	0.00
16	E1_Ae	KnownBoundary	0	0.00	0.00	3.53	0.00	0.00	0.00
17	ER1c	ExonRegion	0	6.95	3.38	25.98	8.98	0.00	0.00
18	E1_Af	KnownBoundary	0	10.97	6.97	14.00	9.90	0.00	3.86
19	ER1d	ExonRegion	1	8.45	4.16	28.24	6.46	0.00	1.23
20	ER1e	ExonRegion	1	8.45	4.16	27.88	6.46	0.00	1.85
21	ER1f	ExonRegion	0	6.13	2.19	14.64	10.36	0.00	2.87
22	E1_Ag	KnownBoundary	0	0.00	0.00	2.85	11.15	0.00	0.00
23	E1_Ah	KnownBoundary	0	0.00	0.00	5.75	5.76	0.00	10.41
24	ER1g	ExonRegion	0	0.84	1.04	8.91	15.73	0.00	3.70
25	ER1h	ExonRegion	0	13.76	11.21	41.48	45.30	0.35	6.12
26	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
27	E1a_E3a	KnownJunction	0	3.74	0.00	3.47	0.00	4.08	0.00
28	E1a_E4a	KnownJunction	0	12.11	0.00	43.66	41.54	0.00	18.30
29	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
30	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
31	ER3a	ExonRegion	0	7.03	3.40	3.53	1.47	3.07	3.87
32	E3_Da	KnownBoundary	0	1361.67	725.00	234.82	206.29	2356.39	1544.04
33	ER3b	ExonRegion	0	12.71	6.25	6.02	1.84	19.10	10.63
34	ER4a	ExonRegion	0	17.53	5.00	59.69	60.14	1.32	8.28
35	E4a_E5a	KnownJunction	0	15.67	13.39	83.23	68.08	5.16	4.20
36	ER5a	ExonRegion	0	17.78	19.18	83.61	60.55	5.16	7.37
37	E5_Da	KnownBoundary	0	0.00	0.00	12.13	0.00	0.00	5.21
38	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
39	E5a_E7a	KnownJunction	0	30.61	25.87	103.66	74.38	6.83	13.85
40	ER5b	ExonRegion	0	0.00	0.00	3.89	0.00	0.00	2.02
41	E5_Db	NovelBoundary	0	0.00	0.00	3.02	2.77	0.00	18.22
42	I5_AR3	ActiveIntronRegion	1	0.00	0.00	1.51	0.75	0.00	10.95
43	E6_Aa	NovelBoundary	0	0.00	0.00	2.33	0.00	16.90	12.17
44	ER6a	ExonRegion	0	11.43	6.86	1.53	2.03	50.63	58.40
45	E6_Da	NovelBoundary	0	10.24	2.53	2.79	0.00	0.00	0.00
46	ER7a	ExonRegion	0	17.59	25.97	97.76	66.51	8.58	5.22
47	E7_Da	KnownBoundary	0	0.00	0.00	3.02	3.04	0.00	0.00
48	E7a_E8a	KnownJunction	0	0.00	0.00	87.89	61.60	23.64	10.07
49	E7a_E9a	KnownJunction	0	6.51	16.48	13.15	6.63	13.32	9.57
50	ER7b	ExonRegion	0	0.00	0.00	1.57	0.90	0.00	0.00
51	I7_AR1	ActiveIntronRegion	0	15.53	8.62	5.07	0.57	55.98	35.56
52	I7_SR3	SilentIntronRegion	0	2.52	0.00	6.32	5.51	2.31	1.17
53	ER8a	ExonRegion	0	2.92	0.79	63.42	45.65	10.93	3.70
54	ER9a	ExonRegion	0	11.50	15.51	54.70	37.39	11.43	8.53
55	E9_Da	KnownBoundary	0	19.82	16.09	62.22	41.76	8.66	23.17
56	E9_Db	KnownBoundary	1	0.00	9.11	16.45	3.37	28.88	0.00
57	E9b_E10a	KnownJunction	0	20.73	24.13	89.03	71.77	4.99	5.21
58	ER9b	ExonRegion	0	15.80	25.86	81.58	61.66	13.90	8.75
59	ER9c	ExonRegion	0	0.51	4.33	11.87	13.15	19.04	9.58
60	E9_Dc	NovelBoundary	0	0.00	6.97	3.24	3.37	40.62	72.03
61	I9_AR2	ActiveIntronRegion	0	2.13	6.29	7.68	2.19	0.91	2.80
62	I9_SR2	SilentIntronRegion	0	2.11	0.00	2.17	5.17	0.00	1.85
63	I9_AR3	ActiveIntronRegion	0	5.29	0.70	4.80	5.23	0.92	5.72
64	I9_SR3	SilentIntronRegion	0	4.33	0.00	4.13	0.37	5.13	8.19
65	I9_AR4	ActiveIntronRegion	0	3.00	0.00	7.65	4.88	3.45	8.12
66	I9_AR11	ActiveIntronRegion	0	0.00	0.00	13.04	3.81	0.00	0.00
67	I9_AR12	ActiveIntronRegion	0	0.00	0.00	13.04	6.46	0.00	0.00
68	I9_AR13	ActiveIntronRegion	0	1.18	1.54	4.54	0.60	3.54	11.84
69	I9_AR15	ActiveIntronRegion	1	0.00	0.00	2.17	2.15	22.70	2.37
70	I9_AR16	ActiveIntronRegion	0	0.61	0.30	1.01	2.09	27.12	15.31
71	I9_AR17	ActiveIntronRegion	0	1.96	0.00	1.61	3.64	4.03	6.18
72	ER10a	ExonRegion	0	15.02	17.50	70.84	68.12	2.85	2.76
73	E10a_E11a	KnownJunction	0	17.05	13.95	44.57	44.04	12.57	19.90
74	ER11a	ExonRegion	0	11.10	6.00	45.83	39.68	6.33	8.99
75	E11_Da	NovelBoundary	0	0.00	0.00	17.53	5.98	0.00	3.53
76	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
77	E11a_E13a	KnownJunction	0	7.41	2.53	35.81	43.82	0.00	0.00
78	I11_AR3	ActiveIntronRegion	0	0.00	0.00	10.86	6.46	0.00	0.00
79	I11_SR1	SilentIntronRegion	0	0.24	0.88	8.94	4.53	0.56	0.58
80	I11_AR4	ActiveIntronRegion	0	2.83	1.85	6.86	5.82	4.79	1.48
81	I11_AR5	ActiveIntronRegion	0	3.59	0.00	10.86	9.48	10.67	3.15
82	Ix	Intron	0	12.23	3.47	7.75	3.84	26.99	12.17
83	Ix_AR1	ActiveIntronRegion	0	3.75	5.54	3.86	3.83	17.66	9.07
84	Ix_AR2	ActiveIntronRegion	0	15.10	2.79	9.06	3.85	30.17	13.23
85	Ix_AR1	ActiveIntronRegion	0	25.34	14.06	5.35	6.63	97.16	61.31
86	Ix_SR1	SilentIntronRegion	0	14.57	13.24	11.37	4.70	0.22	0.26
87	Ix_AR2	ActiveIntronRegion	0	7.65	14.43	12.10	8.21	0.00	0.00
88	Ix_AR3	ActiveIntronRegion	0	5.69	2.32	9.26	2.36	0.00	0.00
89	Ix_AR5	ActiveIntronRegion	0	1.22	1.60	13.38	5.80	0.00	0.00
90	Ix_AR2	ActiveIntronRegion	0	1.97	0.00	7.49	9.27	1.28	0.00
91	Ix_AR3	ActiveIntronRegion	0	4.20	0.00	19.65	9.80	2.67	0.00
92	Ix_AR4	ActiveIntronRegion	0	2.11	0.00	16.29	1.88	3.62	0.00
93	Ix_AR5	ActiveIntronRegion	0	4.22	0.00	36.93	10.77	2.71	0.00
94	Ix_AR6	ActiveIntronRegion	0	2.96	0.00	36.35	12.35	1.81	0.00
95	Ix_AR8	ActiveIntronRegion	0	8.14	2.08	4.35	0.00	1.81	0.00
96	Ix_AR10	ActiveIntronRegion	0	4.22	10.39	4.35	2.15	1.11	0.00
97	Ix_AR11	ActiveIntronRegion	0	4.22	10.39	6.52	2.15	0.00	0.00
98	Ix_SR6	SilentIntronRegion	0	5.82	5.10	2.28	5.26	0.00	0.00
99	Ix_AR14	ActiveIntronRegion	0	2.52	3.82	13.12	6.90	0.55	0.00
100	Ix_AR15	ActiveIntronRegion	0	14.12	8.06	10.41	7.69	34.88	24.42
101	Ix_AR16	ActiveIntronRegion	0	2.34	0.89	9.36	3.05	0.00	1.72
102	E12_Aa	NovelBoundary	0	8.86	0.00	0.00	3.26	4.74	4.53
103	ER12a	ExonRegion	0	3.66	4.05	5.03	3.74	6.41	14.19
104	ER12b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
105	Ix_AR1	ActiveIntronRegion	0	0.54	2.28	41.28	27.69	0.00	0.00
106	Ix_AR2	ActiveIntronRegion	0	3.52	0.13	5.81	5.62	0.00	0.44
107	Ix_AR3	ActiveIntronRegion	0	12.08	5.66	7.63	6.48	91.14	68.89
108	I12_SR1	SilentIntronRegion	0	11.06	5.81	7.16	3.84	0.96	1.15
109	I12_AR2	ActiveIntronRegion	0	2.50	3.61	14.69	2.86	0.00	0.00
110	I12_AR4	ActiveIntronRegion	0	0.00	0.00	8.69	5.92	0.00	0.00
111	I12_AR5	ActiveIntronRegion	0	0.00	0.00	9.50	2.96	0.00	0.00
112	I12_AR9	ActiveIntronRegion	0	4.22	0.00	0.00	2.65	74.67	45.47
113	I12_SR5	SilentIntronRegion	0	5.09	0.00	0.00	0.00	28.29	12.74
114	I12_AR10	ActiveIntronRegion	0	11.23	7.15	1.36	0.67	94.15	66.95
115	I12_AR12	ActiveIntronRegion	0	10.91	1.19	3.76	0.95	50.49	21.38
116	I12_SR7	SilentIntronRegion	0	12.23	7.10	3.76	2.72	12.57	12.44
117	I12_SR8	SilentIntronRegion	0	2.00	1.35	9.98	4.31	0.00	3.95
118	E13_Aa	NovelBoundary	0	0.00	0.00	8.94	8.86	0.00	0.00
119	ER13a	ExonRegion	0	11.50	12.06	38.23	21.31	12.76	9.45
120	IG11_SR1	SilentIntergenicRegion	0	6.63	3.22	21.01	8.10	0.77	1.09
121	IG11_AR1	ActiveIntergenicRegion	0	13.02	13.85	9.05	11.13	0.00	1.85
122	IG11_AR2	ActiveIntergenicRegion	0	10.85	7.71	12.87	10.27	0.28	0.20
123	IG11_SR2	SilentIntergenicRegion	0	12.23	11.33	25.30	18.00	0.13	0.54
124	IG11_AR3	ActiveIntergenicRegion	0	6.00	8.53	15.49	6.93	0.45	0.00
125	IG11_SR3	SilentIntergenicRegion	0	9.40	4.11	9.08	4.16	0.47	0.00
126	IG11_AR4	ActiveIntergenicRegion	0	2.56	5.80	9.14	7.06	0.52	0.00
127	IG11_SR4	SilentIntergenicRegion	0	5.89	2.03	9.36	4.36	0.69	0.00
128	IG11_AR5	ActiveIntergenicRegion	0	59.35	27.76	26.05	15.79	63.12	37.67
129	IG11_AR7	ActiveIntergenicRegion	0	1.33	0.29	4.71	1.42	15.28	15.55
130	IG11_AR8	ActiveIntergenicRegion	0	1.74	1.57	4.00	5.28	1.45	0.34
131	IG11_AR10	ActiveIntergenicRegion	0	8.45	0.00	8.69	5.54	0.00	0.00