Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	RP11-534G20.1	Gene	0	22.45	20.38	30.14	23.50	13.96	10.56
2	430295	Transcript	0	0.00	0.00	1.20	3.01	0.00	0.00
3	413405	Transcript	0	1.76	0.67	1.96	1.80	1.05	0.60
4	438399	Transcript	0	18.86	10.45	23.95	13.41	3.95	8.10
5	414457	Transcript	0	10.37	7.92	9.58	3.37	61.09	35.38
6	427063	Transcript	0	0	0	0	0	0	0
7	446807	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
8	423223	Transcript	0	0	0	0	0	0	0
9	445521	Transcript	0	0.00	0.00	0.00	1.36	0.00	0.00
10	438202	Transcript	0	15.48	19.50	4.95	7.40	2.06	2.11
11	455774	Transcript	0	8.34	7.54	3.40	2.89	18.29	12.61
12	ER1a	ExonRegion	0	0.00	0.00	1.20	3.01	0.00	0.00
13	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	3.37	0.00	0.00
14	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
15	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
16	ER1b	ExonRegion	0	0.00	0.52	0.00	2.15	0.00	0.00
17	E1_Ae	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
18	ER1c	ExonRegion	0	0.00	2.08	1.58	2.15	0.00	0.00
19	E1_Af	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
20	E1_Ag	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
21	ER1d	ExonRegion	0	3.17	2.52	12.57	3.54	0.00	0.00
22	E1_Ah	KnownBoundary	0	0.00	0.00	3.30	0.00	0.00	0.00
23	E1_Ai	KnownBoundary	0	54.05	34.42	100.76	37.30	6.99	0.00
24	ER1e	ExonRegion	1	16.89	15.84	42.64	5.65	0.00	0.00
25	ER1f	ExonRegion	1	21.47	16.62	50.33	15.08	0.00	0.00
26	ER1g	ExonRegion	0	27.03	20.36	57.35	22.40	0.72	0.00
27	ER1h	ExonRegion	0	30.71	25.69	67.94	27.61	3.62	1.35
28	ER1i	ExonRegion	0	41.81	34.43	74.45	44.12	6.10	7.21
29	E1_Da	NovelBoundary	0	15.06	10.91	15.77	26.37	0.00	9.24
30	E1a_E3a	KnownJunction	0	17.66	17.21	20.78	7.99	9.57	12.17
31	E1b_E3a	KnownJunction	0	0.00	2.36	11.78	19.25	16.15	9.24
32	ER1j	ExonRegion	0	10.22	6.48	12.69	26.71	3.69	6.66
33	ER2a	ExonRegion	0	0.73	0.72	3.02	1.03	1.13	0.00
34	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	3.26	3.83	0.00
35	ER3a	ExonRegion	0	15.57	15.92	18.93	24.43	9.49	9.79
36	E3a_E4a	KnownJunction	0	13.20	17.83	17.48	24.63	0.00	0.00
37	E3a_E6a	KnownJunction	0	3.19	6.69	0.00	0.00	0.00	0.00
38	E3a_E7a	KnownJunction	0	0.00	0.00	0.00	2.72	0.00	0.00
39	E3a_E8a	KnownJunction	0	3.01	0.00	0.00	0.00	0.00	0.00
40	E3a_E9a	KnownJunction	0	6.03	0.00	0.00	0.00	0.00	0.00
41	E3a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
42	I3_SR1	SilentIntronRegion	0	6.02	1.17	8.98	2.82	0.70	0.00
43	I3_AR2	ActiveIntronRegion	0	12.08	2.38	7.33	1.33	3.92	0.00
44	E4_Aa	NovelBoundary	0	13.80	11.70	12.07	3.37	0.00	0.00
45	ER4a	ExonRegion	0	33.43	40.86	61.63	52.75	9.09	8.98
46	E4_Da	KnownBoundary	0	13.20	14.91	22.54	11.85	5.16	0.00
47	ER4b	ExonRegion	0	39.51	21.56	30.68	23.00	2.70	0.48
48	E4_Db	NovelBoundary	0	21.33	12.82	0.00	0.00	0.00	3.53
49	E4b_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
50	E5_Aa	NovelBoundary	0	6.69	26.77	45.09	21.04	19.39	21.66
51	ER5a	ExonRegion	0	17.06	9.80	41.18	17.23	9.16	23.81
52	E5_Da	NovelBoundary	0	34.10	24.19	90.40	44.26	0.00	0.00
53	I5	Intron	0	7.44	4.78	14.35	9.71	11.07	7.82
54	I5_SR1	SilentIntronRegion	0	22.23	17.09	58.61	35.44	0.59	0.61
55	I5_AR1	ActiveIntronRegion	0	40.68	41.38	44.44	35.47	16.74	11.56
56	I5_SR2	SilentIntronRegion	0	5.02	2.42	12.08	7.83	10.13	5.12
57	I5_AR2	ActiveIntronRegion	0	7.46	3.17	9.02	5.64	2.47	3.37
58	I5_SR4	SilentIntronRegion	0	6.94	1.73	9.16	9.08	7.66	5.03
59	I5_AR4	ActiveIntronRegion	0	2.11	6.23	0.00	0.00	3.62	5.25
60	I5_SR5	SilentIntronRegion	1	6.00	1.60	7.53	1.87	63.05	127.09
61	E6_Aa	NovelBoundary	0	18.38	28.07	13.21	10.77	13.98	30.14
62	ER6a	ExonRegion	0	8.33	8.13	7.24	5.95	0.97	3.21
63	E6_Da	KnownBoundary	0	17.35	19.91	11.73	4.57	5.16	13.68
64	ER6b	ExonRegion	0	17.88	16.33	4.73	8.62	3.59	4.94
65	E6_Db	KnownBoundary	1	30.55	21.49	0.00	16.09	4.33	4.87
66	E6b_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
67	ER6c	ExonRegion	0	15.48	19.50	4.95	7.40	2.06	2.11
68	E6_Dc	NovelBoundary	0	5.48	9.11	8.14	4.95	13.32	5.04
69	Ix	Intron	0	2.58	6.09	8.49	5.79	0.00	8.14
70	Ix_SR1	SilentIntronRegion	0	2.60	6.13	8.55	5.83	0.00	8.20
71	E7_Aa	NovelBoundary	1	20.07	3.49	27.72	0.00	0.00	8.56
72	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
73	E7_Da	NovelBoundary	0	13.50	2.98	31.59	6.47	0.00	0.00
74	Ix	Intron	0	9.31	3.77	15.78	6.15	2.81	5.28
75	Ix_AR1	ActiveIntronRegion	0	9.37	3.80	15.88	6.19	2.83	5.32
76	Ix	Intron	0	32.71	18.10	10.52	6.78	33.70	12.99
77	Ix_AR1	ActiveIntronRegion	0	32.82	18.16	10.55	6.80	33.80	13.03
78	E8_Aa	NovelBoundary	1	104.24	33.63	16.62	15.50	257.78	37.02
79	ER8a	ExonRegion	0	29.62	29.42	10.57	7.26	68.19	50.46
80	E8_Da	NovelBoundary	0	6.39	3.49	10.59	2.99	0.00	0.00
81	Ix	Intron	0	1.47	0.00	8.33	6.51	0.21	0.22
82	Ix_SR1	SilentIntronRegion	0	1.51	0.00	8.57	6.69	0.22	0.22
83	Ix_AR2	ActiveIntronRegion	0	12.90	8.31	4.35	4.31	0.00	0.00
84	Ix	Intron	0	8.40	3.18	6.98	5.23	6.72	3.52
85	Ix_AR1	ActiveIntronRegion	0	4.72	0.46	9.95	7.55	1.94	0.00
86	Ix_SR2	SilentIntronRegion	0	9.65	1.68	6.90	1.76	1.86	1.92
87	Ix_AR2	ActiveIntronRegion	0	15.23	0.00	4.35	0.00	4.97	7.80
88	Ix_AR3	ActiveIntronRegion	0	10.37	1.81	11.15	4.93	22.40	11.11
89	Ix_AR4	ActiveIntronRegion	0	18.32	1.19	6.05	3.39	24.21	17.32
90	Ix_SR3	SilentIntronRegion	0	15.95	0.00	4.35	2.15	30.94	20.77
91	Ix_AR5	ActiveIntronRegion	0	16.89	3.12	4.35	2.15	63.05	28.46
92	Ix_AR6	ActiveIntronRegion	0	18.35	4.16	7.60	8.04	77.40	35.32
93	Ix_AR7	ActiveIntronRegion	0	14.62	4.16	9.86	8.62	71.14	29.48
94	Ix_AR8	ActiveIntronRegion	0	11.86	4.16	8.69	8.62	60.36	20.51
95	Ix_SR4	SilentIntronRegion	0	14.51	10.69	3.31	0.75	1.94	1.41
96	Ix_AR10	ActiveIntronRegion	0	7.59	2.42	7.40	19.88	0.00	0.00
97	Ix_SR5	SilentIntronRegion	0	3.58	6.84	6.75	15.02	0.00	0.00
98	Ix_AR11	ActiveIntronRegion	0	4.70	1.98	6.20	7.00	0.73	0.00
99	Ix_AR1	ActiveIntronRegion	0	8.00	0.30	12.49	10.59	8.32	2.55
100	E9_Aa	NovelBoundary	1	26.51	0.00	9.73	17.62	28.55	3.86
101	ER9a	ExonRegion	0	13.68	4.24	8.67	7.80	12.25	6.21
102	E9_Da	KnownBoundary	0	3.68	5.74	18.22	4.57	17.48	8.40
103	ER9b	ExonRegion	0	18.19	5.81	11.50	2.12	43.63	19.48
104	E9_Db	KnownBoundary	1	12.17	9.79	13.55	0.00	165.89	58.85
105	ER9c	ExonRegion	0	10.37	7.92	9.58	3.37	61.09	35.38
106	E9_Dc	NovelBoundary	0	6.21	0.00	17.36	12.02	19.14	3.61
107	Ix	Intron	0	4.63	2.60	13.83	9.67	3.96	0.58
108	Ix_AR1	ActiveIntronRegion	0	4.64	2.61	13.87	9.70	3.97	0.58
109	Ix	Intron	0	18.43	5.14	12.32	6.11	20.25	6.06
110	Ix_AR1	ActiveIntronRegion	0	18.46	5.15	12.35	6.12	20.29	6.07
111	ER10a	ExonRegion	0	3.53	1.34	3.91	3.60	2.09	1.19