Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	CUGBP2	Gene	0	128.52	36.92	176.13	80.39	709.22	273.86
2	379261	Transcript	0	19.06	16.40	177.44	60.39	9.02	4.94
3	450189	Transcript	0	0.61	1.48	6.16	1.42	0.40	0.00
4	399850	Transcript	0	0	0	0	0	0	0
5	417956	Transcript	0	0.00	0.00	11.44	0.00	4.83	0.00
6	354440	Transcript	0	0	0	0	0	0	0
7	315874	Transcript	0	0	0	0	0	0	0
8	354897	Transcript	0	0.00	0.00	0.00	0.00	5.16	0.00
9	416382	Transcript	0	0.00	0.00	0.00	2.72	4.74	5.21
10	427450	Transcript	0	0	0	0	0	0	0
11	379259	Transcript	0	7.11	0.00	3.02	2.28	0.00	0.00
12	IG27	Intergenic	0	5.30	1.72	16.50	6.39	9.58	5.33
13	IG27_SR2	SilentIntergenicRegion	0	8.78	1.76	18.71	8.15	1.49	1.14
14	IG27_AR2	ActiveIntergenicRegion	0	2.67	0.00	10.30	2.91	0.29	0.04
15	IG27_SR3	SilentIntergenicRegion	0	3.54	1.74	18.96	1.84	0.85	0.78
16	IG27_AR4	ActiveIntergenicRegion	0	6.40	0.84	19.81	8.70	15.35	2.62
17	IG27_SR5	SilentIntergenicRegion	0	18.77	6.25	17.29	6.77	9.70	3.30
18	IG27_AR5	ActiveIntergenicRegion	0	3.13	0.00	16.00	3.53	3.32	1.07
19	IG27_SR6	SilentIntergenicRegion	0	1.84	0.94	15.49	6.16	12.93	7.91
20	IG27_AR6	ActiveIntergenicRegion	0	2.94	0.90	23.02	7.23	0.00	0.00
21	IG27_SR7	SilentIntergenicRegion	0	3.08	0.61	12.04	4.18	0.00	0.00
22	IG27_AR7	ActiveIntergenicRegion	0	7.66	3.06	22.16	6.55	0.00	0.00
23	ER1a	ExonRegion	0	18.07	13.77	127.88	51.45	0.76	1.65
24	E1_Da	NovelBoundary	0	6.57	7.48	64.10	30.18	0.00	0.00
25	E1a_E4a	KnownJunction	0	30.01	35.43	384.93	126.36	9.24	8.73
26	I1	Intron	0	3.89	2.51	45.79	13.79	1.36	0.25
27	I1_AR1	ActiveIntronRegion	0	4.13	4.52	45.03	12.90	0.00	0.00
28	I1_SR2	SilentIntronRegion	0	3.88	2.36	46.28	13.98	1.49	0.27
29	Ix	Intron	0	3.38	1.11	38.88	12.66	60.36	9.15
30	Ix_SR1	SilentIntronRegion	0	3.40	1.11	39.02	12.71	60.55	9.18
31	I1	Intron	0	4.56	2.69	43.84	14.12	34.02	24.27
32	I1_SR1	SilentIntronRegion	0	11.90	3.63	58.53	19.10	155.44	65.17
33	I1_AR1	ActiveIntronRegion	0	3.54	8.89	42.82	19.73	1.35	1.59
34	I1_SR2	SilentIntronRegion	0	2.99	2.90	41.75	13.80	2.57	19.84
35	I1_SR3	SilentIntronRegion	0	1.94	1.18	42.09	12.00	0.00	0.42
36	ER2a	ExonRegion	0	0.61	1.48	6.16	1.42	0.40	0.00
37	E2a_E4a	KnownJunction	0	0.00	0.00	69.51	41.54	9.24	0.00
38	ER2b	ExonRegion	0	1.48	0.00	55.62	28.65	3.62	0.00
39	I2	Intron	0	7.74	2.14	45.12	15.29	0.97	1.02
40	I2_SR3	SilentIntronRegion	0	2.30	1.14	57.23	17.60	0.00	2.03
41	I2_AR3	ActiveIntronRegion	0	3.48	0.00	65.28	25.35	0.00	0.00
42	I2_AR4	ActiveIntronRegion	0	1.77	0.00	37.30	9.72	0.18	0.00
43	I2_SR4	SilentIntronRegion	0	14.75	3.73	39.85	15.18	0.79	0.37
44	I2_AR5	ActiveIntronRegion	0	6.12	1.47	53.00	25.02	17.42	1.33
45	I2	Intron	0	14.61	4.22	43.29	15.40	70.68	23.77
46	I2_AR1	ActiveIntronRegion	0	96.45	27.47	51.76	17.71	476.09	115.00
47	I2_SR1	SilentIntronRegion	0	10.53	3.63	43.07	13.49	8.87	5.39
48	I2_AR2	ActiveIntronRegion	0	3.57	0.45	39.26	15.26	0.00	0.00
49	I2_SR2	SilentIntronRegion	0	2.99	1.14	50.92	17.96	2.03	0.18
50	I2_AR3	ActiveIntronRegion	0	41.74	10.72	55.50	15.82	507.82	191.96
51	I2_SR3	SilentIntronRegion	0	33.25	8.10	42.67	14.02	0.55	0.21
52	I2_AR4	ActiveIntronRegion	0	10.90	1.58	39.97	16.63	0.29	0.04
53	I2_AR5	ActiveIntronRegion	0	15.48	0.00	41.28	21.54	1.81	1.85
54	I2_SR4	SilentIntronRegion	0	6.67	2.01	39.19	15.76	38.68	13.20
55	I2_AR6	ActiveIntronRegion	0	4.98	5.13	53.89	27.94	0.00	0.00
56	I2_SR5	SilentIntronRegion	0	5.88	8.04	49.68	24.91	0.00	0.00
57	I2_AR7	ActiveIntronRegion	0	4.01	2.03	42.12	11.26	0.00	0.00
58	Ix	Intron	0	19.39	8.23	37.87	15.27	41.29	32.85
59	Ix_SR1	SilentIntronRegion	0	2.71	1.61	42.34	14.96	3.33	4.83
60	Ix_AR2	ActiveIntronRegion	0	3.72	2.54	50.70	19.12	0.00	0.00
61	Ix_AR3	ActiveIntronRegion	0	6.33	4.16	69.75	33.56	0.00	0.00
62	Ix_AR4	ActiveIntronRegion	0	1.22	1.92	39.72	8.97	24.71	6.48
63	Ix_SR4	SilentIntronRegion	0	15.96	3.36	49.49	13.99	185.68	81.01
64	Ix_AR7	ActiveIntronRegion	0	35.95	8.58	69.96	30.69	777.56	574.15
65	Ix_SR5	SilentIntronRegion	0	40.16	11.16	38.34	12.24	12.33	7.04
66	Ix_AR8	ActiveIntronRegion	0	138.19	72.29	29.98	16.57	156.65	131.56
67	Ix_SR6	SilentIntronRegion	0	21.08	8.44	39.81	17.90	8.78	5.55
68	Ix_AR9	ActiveIntronRegion	0	3.03	2.15	35.26	15.42	2.04	6.87
69	Ix	Intron	0	3.70	0.81	45.93	22.04	1.41	0.00
70	Ix_AR1	ActiveIntronRegion	0	4.62	1.40	44.20	17.40	0.61	0.00
71	Ix_SR1	SilentIntronRegion	0	2.46	0.00	48.62	28.61	2.53	0.00
72	Ix_SR1	SilentIntronRegion	0	2.93	5.16	18.54	16.75	3.02	0.63
73	I2_SR1	SilentIntronRegion	1	7.13	5.04	45.48	22.64	229.25	33.00
74	I2_AR1	ActiveIntronRegion	0	17.63	5.16	20.83	17.20	1234.20	386.19
75	I2_AR2	ActiveIntronRegion	0	7.62	1.59	38.12	8.93	0.00	0.58
76	I2_SR3	SilentIntronRegion	0	27.08	8.51	34.69	18.32	0.85	4.18
77	I2_AR5	ActiveIntronRegion	0	4.11	3.97	59.88	22.28	0.83	1.14
78	I2_AR8	ActiveIntronRegion	1	18.64	11.28	11.89	4.42	245.68	32.63
79	ER3a	ExonRegion	0	0.16	0.00	0.11	2.66	0.00	0.00
80	ER3b	ExonRegion	0	5.49	1.25	10.86	9.26	0.00	0.00
81	ER3c	ExonRegion	0	3.91	3.84	17.78	4.52	0.00	0.00
82	E3b_E4a	KnownJunction	0	2.95	8.83	30.63	13.32	0.00	0.00
83	ER4a	ExonRegion	0	54.72	60.87	519.75	248.19	15.96	6.31
84	E4a_E5a	KnownJunction	0	79.54	82.68	1130.43	484.36	43.45	18.13
85	E4a_E6a	NovelJunction	0	2.53	0.00	13.32	3.37	0.00	0.00
86	I4_AR1	ActiveIntronRegion	0	1.61	0.34	40.83	15.03	0.44	0.00
87	I4_AR2	ActiveIntronRegion	0	74.56	8.74	15.47	4.47	222.36	63.32
88	I4_SR2	SilentIntronRegion	0	26.81	8.00	11.55	4.23	55.43	18.77
89	I4_AR4	ActiveIntronRegion	0	22.83	4.18	43.84	8.83	1.82	0.06
90	I4_SR4	SilentIntronRegion	0	27.84	6.96	29.92	13.01	3.31	2.01
91	I4_AR5	ActiveIntronRegion	1	61.30	6.25	14.37	6.81	1.24	0.00
92	I4_SR1	SilentIntronRegion	0	103.81	62.72	5.97	1.97	0.00	0.69
93	I4_AR1	ActiveIntronRegion	0	178.38	87.19	26.09	10.65	0.00	0.84
94	I4_AR2	ActiveIntronRegion	0	44.31	14.41	25.08	7.87	0.00	0.00
95	E5_Aa	NovelBoundary	0	3.49	0.00	21.12	32.62	9.66	10.41
96	ER5a	ExonRegion	0	51.77	56.92	663.01	291.96	34.05	5.82
97	E5a_E6a	KnownJunction	1	33.02	49.61	358.86	150.94	68.09	0.00
98	I5_SR2	SilentIntronRegion	0	0.24	1.03	42.31	16.43	0.00	0.28
99	I5_AR16	ActiveIntronRegion	0	2.11	0.00	36.67	12.93	0.00	0.00
100	ER6a	ExonRegion	0	34.34	37.10	226.03	95.58	21.70	1.25
101	E6a_E7a	KnownJunction	0	36.76	24.30	141.92	39.75	8.82	4.45
102	I6_AR1	ActiveIntronRegion	0	4.55	2.22	28.47	7.69	74.29	75.00
103	Ix_AR2	ActiveIntronRegion	0	2.88	1.25	42.48	14.88	0.49	1.26
104	I6	Intron	0	89.86	42.21	18.84	8.15	269.05	99.10
105	I6_AR1	ActiveIntronRegion	0	29.23	20.14	2.51	0.00	80.39	22.93
106	I6_AR2	ActiveIntronRegion	0	68.33	39.89	8.67	8.82	170.16	42.74
107	I6_SR1	SilentIntronRegion	0	106.94	51.75	29.21	9.41	198.85	55.64
108	I6_AR3	ActiveIntronRegion	1	143.20	62.48	21.56	5.65	370.87	68.82
109	I6_AR4	ActiveIntronRegion	1	79.40	33.29	17.46	4.23	289.90	59.79
110	I6_AR5	ActiveIntronRegion	0	89.76	28.14	21.79	4.37	241.45	74.72
111	I6_SR2	SilentIntronRegion	0	91.11	42.88	19.71	8.95	285.28	119.65
112	E7_Aa	NovelBoundary	1	63.69	5.34	31.14	3.26	13.82	0.00
113	ER7a	ExonRegion	0	72.58	36.98	243.47	103.59	18.74	3.99
114	E7a_E8a	KnownJunction	0	55.92	24.30	130.64	34.31	10.32	4.03
115	E7a_E9a	KnownJunction	0	0.00	0.00	11.44	0.00	4.83	0.00
116	I7	Intron	0	14.64	4.96	29.08	16.32	38.88	25.19
117	I7_AR1	ActiveIntronRegion	0	28.55	8.96	28.24	22.90	189.08	102.87
118	I7_SR1	SilentIntronRegion	0	24.42	9.74	39.34	23.74	21.53	10.15
119	I7_AR2	ActiveIntronRegion	0	15.98	7.71	33.02	10.10	83.56	87.89
120	I7_SR2	SilentIntronRegion	0	19.37	4.58	25.66	20.05	0.87	0.55
121	I7_AR3	ActiveIntronRegion	0	19.05	4.00	39.08	29.12	0.64	0.62
122	I7_SR4	SilentIntronRegion	0	6.86	1.22	34.67	22.03	0.00	1.84
123	ER8a	ExonRegion	0	28.40	28.57	176.95	48.63	7.10	2.57
124	E8_Da	NovelBoundary	0	11.63	0.00	39.73	27.57	9.99	0.00
125	E8a_E9a	KnownJunction	0	32.00	51.01	243.93	67.69	23.39	4.62
126	I8	Intron	0	2.28	2.91	42.03	15.84	40.30	4.74
127	I8_AR2	ActiveIntronRegion	1	3.91	2.96	30.90	7.69	168.84	19.65
128	I8_AR3	ActiveIntronRegion	0	0.40	1.56	48.81	9.11	0.00	0.15
129	I8_AR4	ActiveIntronRegion	0	1.23	0.00	38.23	15.02	0.47	0.70
130	I8_AR5	ActiveIntronRegion	0	3.89	0.47	41.66	15.20	0.00	0.15
131	I8_SR5	SilentIntronRegion	0	1.18	6.24	61.46	29.72	0.38	0.26
132	ER9a	ExonRegion	0	39.44	27.92	204.07	67.74	7.83	3.02
133	E9a_E10a	KnownJunction	0	42.60	14.85	151.65	58.99	29.80	0.00
134	E10_Aa	NovelBoundary	1	0.00	18.50	10.99	8.10	0.00	0.00
135	ER10a	ExonRegion	0	30.81	12.37	111.82	40.63	16.84	2.72
136	E10a_E11a	KnownJunction	0	24.64	15.80	61.71	34.09	28.13	13.43
137	I10_SR1	SilentIntronRegion	1	0.00	3.81	43.81	2.15	0.00	0.85
138	I10_AR2	ActiveIntronRegion	1	0.00	2.08	41.28	2.15	0.00	0.00
139	I10_SR2	SilentIntronRegion	1	1.82	3.64	62.09	3.41	0.00	0.80
140	I10_AR3	ActiveIntronRegion	0	3.69	3.68	64.08	34.15	0.00	0.00
141	I10_AR4	ActiveIntronRegion	0	6.33	4.16	94.14	69.17	0.00	0.00
142	I10_SR2	SilentIntronRegion	0	2.73	4.70	55.75	35.10	0.00	0.00
143	I10_AR5	ActiveIntronRegion	0	5.14	2.00	32.58	21.06	0.00	1.16
144	I10_AR6	ActiveIntronRegion	1	5.36	2.08	35.26	2.15	0.00	0.00
145	I10_AR7	ActiveIntronRegion	1	7.77	1.98	45.52	3.23	0.00	0.00
146	I10_AR13	ActiveIntronRegion	0	2.06	2.47	34.17	23.12	0.00	0.00
147	ER11a	ExonRegion	0	43.18	14.14	115.09	47.50	12.36	1.33
148	E11a_E12a	KnownJunction	0	55.32	11.70	90.11	41.54	37.46	10.16
149	I11_AR1	ActiveIntronRegion	0	2.81	0.00	33.42	16.54	37.34	11.10
150	I11_SR2	SilentIntronRegion	0	4.89	1.48	41.94	17.35	130.81	31.05
151	I11_AR4	ActiveIntronRegion	0	6.82	6.35	26.26	26.16	1.55	1.85
152	I11_SR3	SilentIntronRegion	0	6.33	8.61	36.62	30.77	1.81	1.85
153	I11_AR5	ActiveIntronRegion	0	5.73	10.39	40.04	30.16	1.81	1.85
154	I11_AR7	ActiveIntronRegion	0	16.89	13.92	10.86	4.31	3.62	53.87
155	I11_AR8	ActiveIntronRegion	0	18.79	8.30	12.83	6.65	0.10	1.52
156	ER12a	ExonRegion	0	32.62	13.28	89.78	34.90	14.83	3.21
157	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	5.16	0.00
158	E12a_E14a	KnownJunction	0	16.27	3.15	49.13	14.30	27.38	9.40
159	E12a_E14b	KnownJunction	0	9.10	0.00	19.53	3.37	17.06	4.45
160	E12_Db	NovelBoundary	0	10.06	0.00	61.19	45.67	0.00	0.00
161	E12b_E13a	KnownJunction	0	7.11	0.00	3.02	2.28	0.00	0.00
162	E12b_E14b	KnownJunction	0	0.00	0.00	0.00	2.72	4.74	5.21
163	ER12b	ExonRegion	0	7.92	0.00	11.95	8.62	1.81	1.85
164	I12	Intron	0	4.82	3.00	55.37	30.46	9.93	3.69
165	I12_SR1	SilentIntronRegion	0	5.37	3.53	49.60	23.72	6.48	2.21
166	I12_AR3	ActiveIntronRegion	0	2.47	2.94	90.65	66.19	28.47	11.25
167	Ix	Intron	0	3.58	5.96	41.08	14.88	0.94	0.24
168	Ix_AR1	ActiveIntronRegion	0	3.69	5.44	41.58	12.63	0.79	0.40
169	Ix_SR1	SilentIntronRegion	0	0.00	10.51	41.66	25.72	0.00	0.00
170	Ix_AR2	ActiveIntronRegion	0	3.71	6.48	40.60	17.80	1.27	0.00
171	I12	Intron	0	15.63	8.60	61.21	41.15	24.61	1.62
172	I12_AR1	ActiveIntronRegion	0	4.62	0.69	46.30	30.15	7.41	0.62
173	I12_SR1	SilentIntronRegion	0	13.01	4.31	54.65	33.83	11.09	0.53
174	I12_AR2	ActiveIntronRegion	0	27.28	17.02	92.86	66.57	45.95	3.70
175	I12_SR2	SilentIntronRegion	0	15.65	13.95	34.86	22.88	39.45	1.38
176	ER13a	ExonRegion	0	3.52	0.00	1.60	1.38	1.89	0.00
177	E13a_E14b	KnownJunction	0	0.00	0.00	6.38	0.00	0.00	0.00
178	I13_SR1	SilentIntronRegion	0	9.87	10.41	20.92	14.95	62.45	18.44
179	ER14a	ExonRegion	0	14.11	2.30	30.76	10.54	16.84	10.23
180	ER14b	ExonRegion	0	28.71	22.75	93.39	55.49	128.72	96.22
181	E14a_E15a	KnownJunction	0	46.46	25.54	200.32	95.04	40.54	9.24
182	I14_AR1	ActiveIntronRegion	0	3.67	0.00	6.30	7.50	123.77	84.83
183	ER15a	ExonRegion	0	57.72	28.98	288.57	151.77	66.80	12.19
184	E15a_E16a	KnownJunction	1	57.97	23.17	188.14	97.93	216.00	23.34
185	I15_AR1	ActiveIntronRegion	0	6.33	3.46	39.52	17.75	0.00	0.00
186	ER16a	ExonRegion	0	121.09	58.17	462.73	285.74	116.89	29.06
187	E16_Da	KnownBoundary	0	90.02	36.28	185.06	92.11	42.45	25.44
188	E16a_E16b	KnownJunction	0	10.54	0.00	25.33	12.02	148.82	49.87
189	ER16b	ExonRegion	0	38.26	24.81	203.35	100.05	324.13	99.25
190	E16_Ab	KnownBoundary	1	28.98	23.29	157.85	71.23	2256.60	287.89
191	ER16c	ExonRegion	0	76.51	24.82	172.74	67.39	4555.15	1818.71
192	E16_Db	KnownBoundary	0	54.65	32.85	70.59	34.31	1534.69	1072.63
193	ER16d	ExonRegion	0	63.14	22.75	209.56	87.32	326.42	269.05
194	E16_Dc	KnownBoundary	0	55.92	31.38	145.84	73.35	259.53	197.05
195	E16c_E16c	KnownJunction	0	97.25	43.87	237.89	109.18	461.79	304.26
196	ER16e	ExonRegion	0	7.30	2.86	12.15	7.28	21.50	19.56
197	E16_Ac	KnownBoundary	0	22.23	0.00	37.68	20.50	133.34	64.90
198	ER16f	ExonRegion	0	148.15	55.06	196.29	90.86	681.34	276.91
199	E16_Dd	KnownBoundary	1	139.61	8.27	109.81	63.94	14.40	0.00
200	ER16g	ExonRegion	1	314.33	55.48	108.94	50.19	478.32	84.09