Sample Samtools Stats_mqc-generalstats-samtools_stats-reads_mapped QualiMap_mqc-generalstats-qualimap-percentage_aligned QualiMap_mqc-generalstats-qualimap-general_error_rate QualiMap_mqc-generalstats-qualimap-median_insert_size QualiMap_mqc-generalstats-qualimap-30_x_pc QualiMap_mqc-generalstats-qualimap-10_x_pc QualiMap_mqc-generalstats-qualimap-1_x_pc QualiMap_mqc-generalstats-qualimap-mapped_reads QualiMap_mqc-generalstats-qualimap-avg_gc QualiMap_mqc-generalstats-qualimap-median_coverage Samtools Stats_mqc-generalstats-samtools_stats-raw_total_sequences Samtools Stats_mqc-generalstats-samtools_stats-error_rate Samtools Stats_mqc-generalstats-samtools_stats-reads_properly_paired_percent Samtools Stats_mqc-generalstats-samtools_stats-reads_mapped_percent QualiMap_mqc-generalstats-qualimap-5_x_pc Samtools Stats_mqc-generalstats-samtools_stats-non_primary_alignments QualiMap_mqc-generalstats-qualimap-total_reads Samtools Stats_mqc-generalstats-samtools_stats-reads_MQ0_percent QualiMap_mqc-generalstats-qualimap-50_x_pc B34972_2_lanes_dupsFlagged 641120555.0 60.2019761178 1.16 363 28.7299415658 84.8573592949 92.2854743888 654484244.0 45.2523157601 20 1073783754.0 0.01187996 53.1380002607 59.7066730253 91.4210472808 13363689.0 1087147443.0 3.38031869683 11.2563628397 sBC_pBC_NA24143_round1 777417747.0 98.8654372333 0.7 363 64.6678616091 91.3943025928 91.6380406304 782314870.0 41.4579759577 32 786395458.0 0.007559322 96.4330475571 98.8583719668 91.5240286826 4897123.0 791292581.0 3.29989304185 1.46202939308 sBC_pBC_NA24143_round2 829245101.0 98.6948244907 0.97 379 79.6034994065 91.4262102428 91.6453597565 834557454.0 41.5864404968 36 840281586.0 0.01026483 96.4450904914 98.686573027 91.535267301 5312353.0 845593939.0 3.31839462682 4.31519316213 sBC_pBC_NA24143_round3 872944250.0 98.2405938659 0.89 382 80.6606082112 91.4348916404 91.6469462522 878349928.0 41.2018147349 37 888674756.0 0.009450801 96.0370216705 98.2298916568 91.5409693363 5405678.0 894080434.0 3.22013749201 4.99030583885 sBC_pBC_NA24149_round1 814790876.0 98.7123180963 0.76 371 69.8257226436 91.9795065153 92.3083570026 819858527.0 41.5122265627 34 825485762.0 0.008176267 96.4595614673 98.7044130266 92.2395204968 5067651.0 830553413.0 3.63641063018 2.45639701436 sBC_pBC_NA24149_round2 832098096.0 98.8241178083 0.97 385 76.632478799 92.05606401 92.3102247217 837387864.0 41.6230446551 36 842061954.0 0.01027616 96.6280450191 98.8167310074 92.2449673258 5289768.0 847351722.0 3.66739832542 4.72405629399 sBC_pBC_NA24149_round3 904526790.0 99.3458980529 0.79 377 80.3421003156 92.1066293142 92.3114120305 910182811.0 41.5853537897 38 910519512.0 0.008500439 97.1860787537 99.3418348623 92.2536493359 5656021.0 916175533.0 3.63976044041 7.98554989248 sBC_pBC_NA24385_round1 786791729.0 98.734557327 0.76 365 69.018202825 91.9269825127 92.3064880906 791715448.0 41.49444838 34 796938840.0 0.008167592 96.3636080279 98.7267390557 92.2229651349 4923719.0 801862559.0 3.59467986276 2.66509026054 sBC_pBC_NA24385_round2 768910704.0 98.8671053285 0.96 392 68.5319194104 91.9238466932 92.3086950639 773814455.0 41.5892365707 34 777777660.0 0.01010557 96.5934143699 98.8599626274 92.2258362054 4903751.0 782681411.0 3.61077110392 2.5762880234 sBC_pBC_NA24385_round3 789124296.0 98.160998953 0.88 390 66.7209940709 91.9089784459 92.3089422748 793970758.0 41.4833398163 33 803998972.0 0.009416386 95.920811451 98.1499135549 92.2285438871 4846462.0 808845434.0 3.55628265654 2.25147486307