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position.h

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00001 
00004 #ifndef POSITION_H
00005 #define POSITION_H
00006 
00007 #include "allheaders.h"
00008 #include "gelinfo.h"
00009 
00013 #define SIGMA_CUTOFF 4
00014 
00017 #define FWHM_FACTOR 5.0/9.0
00018 
00019 #define TOLERANCEFACTOR 3.0
00020 
00021 #define MAXCURVATUREFACTOR 1.6
00022 
00024 int findPeakPosition (FILE *FLAGOUT_FILE, float **PeakPosition, INT32 **ZoneProjection, struct GelInfo *GelInfo, float *Spacing, float minpsizefactor, int Markerinc, int Verbose);
00026 void writeCurvature(FILE *FLAGOUT_FILE, float **PeakPosition, float *NodePosition, struct GelInfo *GelInfo); 
00028 int correctOutlierPeaks(float **PeakPosition, float *NodePosition, struct GelInfo *GelInfo, int Verbose); 
00031 void smoothPeaks(float **PeakPosition, struct GelInfo *GelInfo, int Verbose); 
00033 void fillEmpties(float *PeakPosition, struct GelInfo *GelInfo);
00034 
00035 #endif

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