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diagnostic.h File Reference

header file for diagnostic.c, contains function to write a PNG of the gel with node and peak position information overlaid. Interpolated peaks are shown in red for diagnostic purposes More...

#include "allheaders.h"
#include "gelinfo.h"

Go to the source code of this file.

Functions

void outputDiagnostic (PIX *pixGel, char *fileDiagnosticImage, float **PeakPosition, float *NodePosition, int *ZoneID, struct GelInfo *GelInfo)
 output a diagnostic image in png format with peaks and nodes position marked


Detailed Description

header file for diagnostic.c, contains function to write a PNG of the gel with node and peak position information overlaid. Interpolated peaks are shown in red for diagnostic purposes


Function Documentation

void outputDiagnostic PIX *  pixGel,
char *  fileDiagnosticImage,
float **  PeakPosition,
float *  NodePosition,
int *  ZoneID,
struct GelInfo GelInfo
 

output a diagnostic image in png format with peaks and nodes position marked

interpolated peaks are shown in red, the rest are shown in green

Parameters:
pixGel pix representation of gel image to be used as background for diagnostic image
fileDiagnosticImage path name to diagnostic image file destination
PeakPosition holds y position of all nodes, negative denotes interpolated
NodePosition holds x position of nodes in each zone
ZoneID array noting the zone number for each column
GelInfo holds various gel parameters


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