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border.h

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00001 
00010 #ifndef BORDER_H
00011 #define BORDER_H
00012 
00013 #include "allheaders.h"
00014 #include "gelinfo.h"
00015 #include "anacutoff.h"
00016 
00020 #define SIGMA_CUTOFF 4
00021 
00024 #define FWHM_FACTOR 5.0/9.0
00025 
00026 #define ZONE_PROJECTION_FACTOR 3
00027 
00028 #define BORDERTOLERANCEFACTOR 0.4
00029 
00032 #define OFFSETFACTOR 40
00033 
00035 void findBorder (FILE *FLAGOUT_FILE, PIX *pixGel, INT32 **ZoneProjection, struct GelInfo *GelInfo, struct AnaCutoff *AnaCutoff, int *ToneAdjusted, int Verbose);
00037 float correlation(PIX *pixGel, int row1, int row2, int start, int stop, int maxoffset);
00039 float roughness (PIX *pixGel, int row, int start, int stop);
00040 #endif

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