##fileformat=VCFv4.3
##fileDate=20230328
##source=nanomonsv-0.5.0
##reference=/projects/jfan_prj/jfan_prj/Nanopore_Testing/2021_nanopore_sv_testing/scratch/depth_testing/POG/COLO829/hg38_no_alt.fa
##contig=<ID=chr1,length=248956422>
##contig=<ID=chr2,length=242193529>
##contig=<ID=chr3,length=198295559>
##contig=<ID=chr4,length=190214555>
##contig=<ID=chr5,length=181538259>
##contig=<ID=chr6,length=170805979>
##contig=<ID=chr7,length=159345973>
##contig=<ID=chr8,length=145138636>
##contig=<ID=chr9,length=138394717>
##contig=<ID=chr10,length=133797422>
##contig=<ID=chr11,length=135086622>
##contig=<ID=chr12,length=133275309>
##contig=<ID=chr13,length=114364328>
##contig=<ID=chr14,length=107043718>
##contig=<ID=chr15,length=101991189>
##contig=<ID=chr16,length=90338345>
##contig=<ID=chr17,length=83257441>
##contig=<ID=chr18,length=80373285>
##contig=<ID=chr19,length=58617616>
##contig=<ID=chr20,length=64444167>
##contig=<ID=chr21,length=46709983>
##contig=<ID=chr22,length=50818468>
##contig=<ID=chrX,length=156040895>
##contig=<ID=chrY,length=57227415>
##contig=<ID=chrM,length=16569>
##contig=<ID=chr1_KI270706v1_random,length=175055>
##contig=<ID=chr1_KI270707v1_random,length=32032>
##contig=<ID=chr1_KI270708v1_random,length=127682>
##contig=<ID=chr1_KI270709v1_random,length=66860>
##contig=<ID=chr1_KI270710v1_random,length=40176>
##contig=<ID=chr1_KI270711v1_random,length=42210>
##contig=<ID=chr1_KI270712v1_random,length=176043>
##contig=<ID=chr1_KI270713v1_random,length=40745>
##contig=<ID=chr1_KI270714v1_random,length=41717>
##contig=<ID=chr2_KI270715v1_random,length=161471>
##contig=<ID=chr2_KI270716v1_random,length=153799>
##contig=<ID=chr3_GL000221v1_random,length=155397>
##contig=<ID=chr4_GL000008v2_random,length=209709>
##contig=<ID=chr5_GL000208v1_random,length=92689>
##contig=<ID=chr9_KI270717v1_random,length=40062>
##contig=<ID=chr9_KI270718v1_random,length=38054>
##contig=<ID=chr9_KI270719v1_random,length=176845>
##contig=<ID=chr9_KI270720v1_random,length=39050>
##contig=<ID=chr11_KI270721v1_random,length=100316>
##contig=<ID=chr14_GL000009v2_random,length=201709>
##contig=<ID=chr14_GL000225v1_random,length=211173>
##contig=<ID=chr14_KI270722v1_random,length=194050>
##contig=<ID=chr14_GL000194v1_random,length=191469>
##contig=<ID=chr14_KI270723v1_random,length=38115>
##contig=<ID=chr14_KI270724v1_random,length=39555>
##contig=<ID=chr14_KI270725v1_random,length=172810>
##contig=<ID=chr14_KI270726v1_random,length=43739>
##contig=<ID=chr15_KI270727v1_random,length=448248>
##contig=<ID=chr16_KI270728v1_random,length=1872759>
##contig=<ID=chr17_GL000205v2_random,length=185591>
##contig=<ID=chr17_KI270729v1_random,length=280839>
##contig=<ID=chr17_KI270730v1_random,length=112551>
##contig=<ID=chr22_KI270731v1_random,length=150754>
##contig=<ID=chr22_KI270732v1_random,length=41543>
##contig=<ID=chr22_KI270733v1_random,length=179772>
##contig=<ID=chr22_KI270734v1_random,length=165050>
##contig=<ID=chr22_KI270735v1_random,length=42811>
##contig=<ID=chr22_KI270736v1_random,length=181920>
##contig=<ID=chr22_KI270737v1_random,length=103838>
##contig=<ID=chr22_KI270738v1_random,length=99375>
##contig=<ID=chr22_KI270739v1_random,length=73985>
##contig=<ID=chrY_KI270740v1_random,length=37240>
##contig=<ID=chrUn_KI270302v1,length=2274>
##contig=<ID=chrUn_KI270304v1,length=2165>
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##contig=<ID=chrUn_KI270305v1,length=1472>
##contig=<ID=chrUn_KI270322v1,length=21476>
##contig=<ID=chrUn_KI270320v1,length=4416>
##contig=<ID=chrUn_KI270310v1,length=1201>
##contig=<ID=chrUn_KI270316v1,length=1444>
##contig=<ID=chrUn_KI270315v1,length=2276>
##contig=<ID=chrUn_KI270312v1,length=998>
##contig=<ID=chrUn_KI270311v1,length=12399>
##contig=<ID=chrUn_KI270317v1,length=37690>
##contig=<ID=chrUn_KI270412v1,length=1179>
##contig=<ID=chrUn_KI270411v1,length=2646>
##contig=<ID=chrUn_KI270414v1,length=2489>
##contig=<ID=chrUn_KI270419v1,length=1029>
##contig=<ID=chrUn_KI270418v1,length=2145>
##contig=<ID=chrUn_KI270420v1,length=2321>
##contig=<ID=chrUn_KI270424v1,length=2140>
##contig=<ID=chrUn_KI270417v1,length=2043>
##contig=<ID=chrUn_KI270422v1,length=1445>
##contig=<ID=chrUn_KI270423v1,length=981>
##contig=<ID=chrUn_KI270425v1,length=1884>
##contig=<ID=chrUn_KI270429v1,length=1361>
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##contig=<ID=chrUn_KI270467v1,length=3920>
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##contig=<ID=chrUn_KI270510v1,length=2415>
##contig=<ID=chrUn_KI270509v1,length=2318>
##contig=<ID=chrUn_KI270518v1,length=2186>
##contig=<ID=chrUn_KI270508v1,length=1951>
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##contig=<ID=chrUn_KI270519v1,length=138126>
##contig=<ID=chrUn_KI270522v1,length=5674>
##contig=<ID=chrUn_KI270511v1,length=8127>
##contig=<ID=chrUn_KI270515v1,length=6361>
##contig=<ID=chrUn_KI270507v1,length=5353>
##contig=<ID=chrUn_KI270517v1,length=3253>
##contig=<ID=chrUn_KI270529v1,length=1899>
##contig=<ID=chrUn_KI270528v1,length=2983>
##contig=<ID=chrUn_KI270530v1,length=2168>
##contig=<ID=chrUn_KI270539v1,length=993>
##contig=<ID=chrUn_KI270538v1,length=91309>
##contig=<ID=chrUn_KI270544v1,length=1202>
##contig=<ID=chrUn_KI270548v1,length=1599>
##contig=<ID=chrUn_KI270583v1,length=1400>
##contig=<ID=chrUn_KI270587v1,length=2969>
##contig=<ID=chrUn_KI270580v1,length=1553>
##contig=<ID=chrUn_KI270581v1,length=7046>
##contig=<ID=chrUn_KI270579v1,length=31033>
##contig=<ID=chrUn_KI270589v1,length=44474>
##contig=<ID=chrUn_KI270590v1,length=4685>
##contig=<ID=chrUn_KI270584v1,length=4513>
##contig=<ID=chrUn_KI270582v1,length=6504>
##contig=<ID=chrUn_KI270588v1,length=6158>
##contig=<ID=chrUn_KI270593v1,length=3041>
##contig=<ID=chrUn_KI270591v1,length=5796>
##contig=<ID=chrUn_KI270330v1,length=1652>
##contig=<ID=chrUn_KI270329v1,length=1040>
##contig=<ID=chrUn_KI270334v1,length=1368>
##contig=<ID=chrUn_KI270333v1,length=2699>
##contig=<ID=chrUn_KI270335v1,length=1048>
##contig=<ID=chrUn_KI270338v1,length=1428>
##contig=<ID=chrUn_KI270340v1,length=1428>
##contig=<ID=chrUn_KI270336v1,length=1026>
##contig=<ID=chrUn_KI270337v1,length=1121>
##contig=<ID=chrUn_KI270363v1,length=1803>
##contig=<ID=chrUn_KI270364v1,length=2855>
##contig=<ID=chrUn_KI270362v1,length=3530>
##contig=<ID=chrUn_KI270366v1,length=8320>
##contig=<ID=chrUn_KI270378v1,length=1048>
##contig=<ID=chrUn_KI270379v1,length=1045>
##contig=<ID=chrUn_KI270389v1,length=1298>
##contig=<ID=chrUn_KI270390v1,length=2387>
##contig=<ID=chrUn_KI270387v1,length=1537>
##contig=<ID=chrUn_KI270395v1,length=1143>
##contig=<ID=chrUn_KI270396v1,length=1880>
##contig=<ID=chrUn_KI270388v1,length=1216>
##contig=<ID=chrUn_KI270394v1,length=970>
##contig=<ID=chrUn_KI270386v1,length=1788>
##contig=<ID=chrUn_KI270391v1,length=1484>
##contig=<ID=chrUn_KI270383v1,length=1750>
##contig=<ID=chrUn_KI270393v1,length=1308>
##contig=<ID=chrUn_KI270384v1,length=1658>
##contig=<ID=chrUn_KI270392v1,length=971>
##contig=<ID=chrUn_KI270381v1,length=1930>
##contig=<ID=chrUn_KI270385v1,length=990>
##contig=<ID=chrUn_KI270382v1,length=4215>
##contig=<ID=chrUn_KI270376v1,length=1136>
##contig=<ID=chrUn_KI270374v1,length=2656>
##contig=<ID=chrUn_KI270372v1,length=1650>
##contig=<ID=chrUn_KI270373v1,length=1451>
##contig=<ID=chrUn_KI270375v1,length=2378>
##contig=<ID=chrUn_KI270371v1,length=2805>
##contig=<ID=chrUn_KI270448v1,length=7992>
##contig=<ID=chrUn_KI270521v1,length=7642>
##contig=<ID=chrUn_GL000195v1,length=182896>
##contig=<ID=chrUn_GL000219v1,length=179198>
##contig=<ID=chrUn_GL000220v1,length=161802>
##contig=<ID=chrUn_GL000224v1,length=179693>
##contig=<ID=chrUn_KI270741v1,length=157432>
##contig=<ID=chrUn_GL000226v1,length=15008>
##contig=<ID=chrUn_GL000213v1,length=164239>
##contig=<ID=chrUn_KI270743v1,length=210658>
##contig=<ID=chrUn_KI270744v1,length=168472>
##contig=<ID=chrUn_KI270745v1,length=41891>
##contig=<ID=chrUn_KI270746v1,length=66486>
##contig=<ID=chrUn_KI270747v1,length=198735>
##contig=<ID=chrUn_KI270748v1,length=93321>
##contig=<ID=chrUn_KI270749v1,length=158759>
##contig=<ID=chrUn_KI270750v1,length=148850>
##contig=<ID=chrUn_KI270751v1,length=150742>
##contig=<ID=chrUn_KI270752v1,length=27745>
##contig=<ID=chrUn_KI270753v1,length=62944>
##contig=<ID=chrUn_KI270754v1,length=40191>
##contig=<ID=chrUn_KI270755v1,length=36723>
##contig=<ID=chrUn_KI270756v1,length=79590>
##contig=<ID=chrUn_KI270757v1,length=71251>
##contig=<ID=chrUn_GL000214v1,length=137718>
##contig=<ID=chrUn_KI270742v1,length=186739>
##contig=<ID=chrUn_GL000216v2,length=176608>
##contig=<ID=chrUn_GL000218v1,length=161147>
##contig=<ID=chrEBV,length=171823>
##FILTER=<ID=Duplicate_with_close_SV,Description="When multiple SVs that share breakpoints in close proximity are detected, all but one SVs are filtered.">
##FILTER=<ID=Duplicate_with_insertion,Description="Breakend SVs that are inferred to be the same as any of detected insertions">
##FILTER=<ID=Duplicate_with_close_insertion,Description="When multiple insertions in close proximity are detected, all but one insertions are filtered.">
##FILTER=<ID=SV_with_decoy,Description="SVs involving decoy contigs">
##FILTER=<ID=Too_small_size,Description="Insertions whose size is below the threshould (currently 100bp)">
##FILTER=<ID=Too_low_VAF,Description="SVs whose variant allele frequencies are inferred to be low">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
##INFO=<ID=MATEID,Number=1,Type=String,Description="ID of mate breakend">
##INFO=<ID=SVINSLEN,Number=1,Type=Integer,Description="Length of insertion">
##INFO=<ID=SVINSSEQ,Number=1,Type=String,Description="Sequence of insertion">
##ALT=<ID=DEL,Description="Deletion">
##ALT=<ID=INS,Description="Insertion">
##ALT=<ID=DUP,Description="Duplication">
##FORMAT=<ID=TR,Number=1,Type=Integer,Description="The number of reads around the breakpoints">
##FORMAT=<ID=VR,Number=1,Type=Integer,Description="The number of variant supporting reads determined in the validation realignment step">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	TUMOR	CONTROL
chr1	151813068	r_21_0	G	]chr2:26814719]G	.	PASS	SVTYPE=BND;MATEID=r_21_1	TR:VR	68:10	24:0
chr2	26814719	r_21_1	G	G[chr1:151813068[	.	PASS	SVTYPE=BND;MATEID=r_21_0	TR:VR	68:10	24:0
chr12	64884336	r_64_0	C	C]chr12:65115277]	.	PASS	SVTYPE=BND;MATEID=r_64_1	TR:VR	56:6	20:0
chr12	65115277	r_64_1	T	T]chr12:64884336]	.	PASS	SVTYPE=BND;MATEID=r_64_0	TR:VR	56:6	20:0
chr15	22224535	i_379	A	<INS>	.	PASS	END=22224544;SVTYPE=INS;SVINSLEN=291;SVINSSEQ=GCCCAGGAGATTGACGGCTACACACACACACACACACACACACACACACACAACGTCCCTGAGCTCACCACCTGGGGACGCCCTCATTCCATCTCTATGAACAGGGCAGACGGAACCCAGGAGCCCAGGAGATTGACGGCTACACACACACACACACACACACACACACACACACACACGTCCCTGAGCTCACCACCTGGGGACGCCCTCATTCCATCTCTATGAACAGGGCAGACGGAACCCAGGAGCCCAGGAGATTGACGGCTACACACACACACACACACACACACA	TR:VR	41:7	6:0
chr17	18777530	d_733	T	<DEL>	.	PASS	END=18784968;SVTYPE=DEL;SVLEN=-7438	TR:VR	28:7	23:0
chr2	116489616	r_242_0	T	[chr2:116938277[G	.	PASS	SVTYPE=BND;MATEID=r_242_1	TR:VR	172:16	33:0
chr2	116938277	r_242_1	G	[chr2:116489616[G	.	PASS	SVTYPE=BND;MATEID=r_242_0	TR:VR	172:16	33:0
chr3	10314	i_1031	C	<INS>	.	Too_low_VAF	END=10317;SVTYPE=INS;SVINSLEN=492;SVINSSEQ=TCAACCCCAACCCCAACCCCAACCCCAACCCCCTAACCCTAACCCCAACCCCAACCCCAACCCCAACCCTCAACCCCAACCTTTTTAATTTTAATTTTAATTCTCTTAATTTTAATTTTAATTCTAATTTTAATTTTAATTTTAATTTTAATTTTAATTTGTTTTAATTTTAATTTTAATTCTTCTTAATTTTAATTTTAATTTTAATTTTAATTTTATCTTTTAATGACTTACGATTTTAATTTTAATTTTAATTTTAATTTTAATTTTTATTTTTATTTTAATTTTAATTTTCATTCTTTAATTTTAATTTTAATTCTCTCTCTTTTAATTTTACTATTTTTTACTTTTTACATTTTAATACTAATTTTAATACTCATTTTAATTCTTACTTACTTTTTACTCTCTTACTTTTAATTCTTTACCATTTACTAATTTTAATTTTAATTTTAATTTTAATTTTAATTTTAATTCTAACTTTACTAATTTACA	TR:VR	370:4	163:0
chr3	77134296	r_362	A	<DUP>	.	PASS	END=77167951;SVTYPE=DUP;SVLEN=33655	TR:VR	78:10	28:0
chr8	20302998	r_463	C	<DEL>	.	PASS	END=142415871;SVTYPE=DEL;SVLEN=-122112873	TR:VR	55:19	22:0
chr1	152118545	r_22_0	A	A[chr2:26668660[	.	PASS	SVTYPE=BND;MATEID=r_22_1	TR:VR	64:5	28:0
chr2	26668660	r_22_1	A	]chr1:152118545]A	.	PASS	SVTYPE=BND;MATEID=r_22_0	TR:VR	64:5	28:0
chr1	2654192	i_4	C	<INS>	.	Too_small_size;Too_low_VAF	END=2654192;SVTYPE=INS;SVINSLEN=33;SVINSSEQ=TGGAGCAGCACCCACACACCCAGGTGAGCAACT	TR:VR	170:3	38:0
chr11	10316635	r_46	T	<DUP>	.	PASS	END=34051898;SVTYPE=DUP;SVLEN=23735263	TR:VR	56:8	28:0
chr12	64884334	r_65_0	C	[chr12:65115275[T	.	PASS	SVTYPE=BND;MATEID=r_65_1	TR:VR	56:7	20:0
chr12	65115275	r_65_1	T	[chr12:64884334[T	.	PASS	SVTYPE=BND;MATEID=r_65_0	TR:VR	56:7	20:0
chr19	45430592	r_175_0	A	A]chr19:45459003]	.	PASS	SVTYPE=BND;MATEID=r_175_1	TR:VR	113:6	26:0
chr19	45459003	r_175_1	T	T]chr19:45430592]	.	PASS	SVTYPE=BND;MATEID=r_175_0	TR:VR	113:6	26:0
chr1_KI270706v1_random	31147	d_887	C	<DEL>	.	PASS	END=34772;SVTYPE=DEL;SVLEN=-3625;SVINSLEN=63;SVINSSEQ=ATTCAGACACCAGCAAAAGTGTTCTGGAATCCTAGGTGTGGGAAAAACATTCAGAACCTAGTA	TR:VR	37:5	17:0
chr2	116522480	r_243	T	<DUP>	.	Too_low_VAF	END=119299393;SVTYPE=DUP;SVLEN=2776913	TR:VR	266:13	30:0
chr2	121090525	r_298_0	T	T]chr2:121091730]	.	PASS	SVTYPE=BND;MATEID=r_298_1	TR:VR	187:14	13:0
chr2	121091730	r_298_1	C	C]chr2:121090525]	.	PASS	SVTYPE=BND;MATEID=r_298_0	TR:VR	187:14	13:0
chr3	105501520	r_367	A	<DUP>	.	PASS	END=105560248;SVTYPE=DUP;SVLEN=58728	TR:VR	93:5	33:0
chr3	77159199	r_363_0	A	A]chr3:130680706]	.	PASS	SVTYPE=BND;MATEID=r_363_1	TR:VR	72:5	24:0
chr3	130680706	r_363_1	A	A]chr3:77159199]	.	PASS	SVTYPE=BND;MATEID=r_363_0	TR:VR	72:5	24:0
chr6	4997992	r_411	A	<DEL>	.	PASS	END=5023738;SVTYPE=DEL;SVLEN=-25746;SVINSLEN=3;SVINSSEQ=GAA	TR:VR	45:11	23:0
chr8	119739305	r_521_0	C	[chr8:122246136[A	.	PASS	SVTYPE=BND;MATEID=r_521_1	TR:VR	113:13	30:0
chr8	122246136	r_521_1	A	[chr8:119739305[A	.	PASS	SVTYPE=BND;MATEID=r_521_0	TR:VR	113:13	30:0
chr8	73136970	r_500_0	G	[chr8:118192845[G	.	PASS	SVTYPE=BND;MATEID=r_500_1	TR:VR	93:6	25:0
chr8	118192845	r_500_1	G	[chr8:73136970[G	.	PASS	SVTYPE=BND;MATEID=r_500_0	TR:VR	93:6	25:0
chrX	12108974	d_1693	G	<DEL>	.	PASS	END=12111920;SVTYPE=DEL;SVLEN=-2946;SVINSLEN=4;SVINSSEQ=TTTT	TR:VR	31:11	17:0
chrY	10660834	d_1705	C	<DEL>	.	Too_low_VAF	END=10660953;SVTYPE=DEL;SVLEN=-119;SVINSLEN=44;SVINSSEQ=ATTTCTTTCGACAGGATCTCCCTCTGTAACCCAGGCTGCAAGGC	TR:VR	70:3	22:0
chr19	20519474	r_162_0	T	]chr2:120897351]G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_162_1	TR:VR	176:6	32:0
chr2	120897351	r_162_1	G	G[chr19:20519474[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_162_0	TR:VR	176:6	32:0
chr2	116535679	r_244	A	<DEL>	.	Too_low_VAF	END=119432174;SVTYPE=DEL;SVLEN=-2896495	TR:VR	285:14	21:0
chr2	121310696	r_299_0	A	A]chr9:22271584]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_299_1	TR:VR	169:3	31:0
chr9	22271584	r_299_1	G	G]chr2:121310696]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_299_0	TR:VR	169:3	31:0
chr2	201230007	r_318	C	<DEL>	.	PASS	END=201339362;SVTYPE=DEL;SVLEN=-109355	TR:VR	61:7	26:0
chr3	77159929	r_364	A	<DUP>	.	PASS	END=141465121;SVTYPE=DUP;SVLEN=64305192	TR:VR	65:7	17:0
chr5	89527734	i_1232	T	<INS>	.	PASS	END=89527734;SVTYPE=INS;SVINSLEN=324;SVINSSEQ=TAAAATGTTATTATTAAACTGATGAGAAAATATAAAGGTTTATTACTGGATTAAATAAGTTTTTCCATATGCTTGAATTTTTTATACACACAGTATATACTCTATTATATGTATACACAGAATACAACTCTATCAGTATTGAACTTAGTTTGTCATTCCATAAAATGGCCATAGATGGCCAGATCAAGTAATCCTACTCATTTTACCCTGTATTACTGAAAATAAAAATGGGGGGGGGGCAAATAAAGACTTTAATATCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT	TR:VR	44:6	13:0
chr8	22740082	d_1514	T	<DEL>	.	PASS	END=22740168;SVTYPE=DEL;SVLEN=-86	TR:VR	31:12	14:0
chr8	7358517	r_435_0	G	[chr8:143267640[G	.	PASS	SVTYPE=BND;MATEID=r_435_1	TR:VR	91:28	31:0
chr8	143267640	r_435_1	G	[chr8:7358517[G	.	PASS	SVTYPE=BND;MATEID=r_435_0	TR:VR	91:28	31:0
chr9	21140690	r_529_0	C	C]chr9:31555662]	.	PASS	SVTYPE=BND;MATEID=r_529_1	TR:VR	67:8	31:0
chr9	31555662	r_529_1	T	T]chr9:21140690]	.	PASS	SVTYPE=BND;MATEID=r_529_0	TR:VR	67:8	31:0
chrX	122065404	d_1696	C	<DEL>	.	PASS	END=122065919;SVTYPE=DEL;SVLEN=-515	TR:VR	26:14	14:0
chr15	38716128	d_602	C	<DEL>	.	Too_small_size	END=38716170;SVTYPE=DEL;SVLEN=-42	TR:VR	44:12	4:0
chr17	21247285	r_123_0	A	A]chr17:61174991]	.	PASS	SVTYPE=BND;MATEID=r_123_1	TR:VR	84:15	14:0
chr17	61174991	r_123_1	C	C]chr17:21247285]	.	PASS	SVTYPE=BND;MATEID=r_123_0	TR:VR	84:15	14:0
chr2	116892491	r_245_0	C	C]chr2:121312557]	.	PASS	SVTYPE=BND;MATEID=r_245_1	TR:VR	223:19	27:0
chr2	121312557	r_245_1	A	A]chr2:116892491]	.	PASS	SVTYPE=BND;MATEID=r_245_0	TR:VR	223:19	27:0
chr2	121312160	r_300_0	T	]chr9:24105025]A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_300_1	TR:VR	167:5	29:0
chr9	24105025	r_300_1	A	A[chr2:121312160[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_300_0	TR:VR	167:5	29:0
chr3	77179046	r_365_0	T	[chr3:141465266[AGTACCACAT	.	PASS	SVTYPE=BND;MATEID=r_365_1;SVINSLEN=9;SVINSSEQ=AGTACCACA	TR:VR	67:5	20:0
chr3	141465266	r_365_1	T	[chr3:77179046[TGTGGTACTT	.	PASS	SVTYPE=BND;MATEID=r_365_0;SVINSLEN=9;SVINSSEQ=TGTGGTACT	TR:VR	67:5	20:0
chr8	121964125	r_522_0	C	[chr8:142248814[T	.	PASS	SVTYPE=BND;MATEID=r_522_1	TR:VR	103:12	26:0
chr8	142248814	r_522_1	T	[chr8:121964125[T	.	PASS	SVTYPE=BND;MATEID=r_522_0	TR:VR	103:12	26:0
chr8	7369594	r_436	A	<DEL>	.	PASS	END=101252905;SVTYPE=DEL;SVLEN=-93883311;SVINSLEN=14;SVINSSEQ=AAGGACATAAATTT	TR:VR	121:30	36:0
chr9	21463218	r_530	A	<DUP>	.	PASS	END=28828222;SVTYPE=DUP;SVLEN=7365004	TR:VR	44:7	25:0
chrUn_KI270442v1	58411	d_1638	G	<INS>	.	PASS	END=58404;SVTYPE=INS;SVINSLEN=188;SVINSSEQ=GAATGGAATGTAAAGGAATAGAATGAAATGTAAAGGAATGGAATGGAATAGAATGGAGTAAAATGGAGAGGAAAGGAGTGGAATGGAATGGACTGGAGTGGGGAAGGATGGAGTGGTGTGGCGTGCAAACAAATGGAACTGAATGGAATGGAATGGAGTGGAGTGGAGTTTAGTGGAAGGTAAAGGAG	TR:VR	110:13	47:1
chr12	71733887	r_67	A	<DUP>	.	PASS	END=71747028;SVTYPE=DUP;SVLEN=13141	TR:VR	52:12	29:0
chr17	21749155	r_124	A	<DUP>	.	PASS	END=60858264;SVTYPE=DUP;SVLEN=39109109	TR:VR	81:8	44:0
chr19	48331362	d_865	G	<DEL>	.	PASS	END=48331497;SVTYPE=DEL;SVLEN=-135	TR:VR	58:12	7:0
chr2	116933194	r_246	A	<DUP>	.	PASS	END=116940425;SVTYPE=DUP;SVLEN=7231	TR:VR	97:13	20:0
chr2	121335769	r_301_0	T	]chr4:133944471]G	.	PASS	SVTYPE=BND;MATEID=r_301_1	TR:VR	170:11	27:0
chr4	133944471	r_301_1	G	G[chr2:121335769[	.	PASS	SVTYPE=BND;MATEID=r_301_0	TR:VR	170:11	27:0
chr20	28842025	i_797	G	<INS>	.	PASS	END=28842025;SVTYPE=INS;SVINSLEN=171;SVINSSEQ=CTGTTTTGAAACAGTCTTTTTTCGAATCTGCAAGTGGATATTTGGAGCCCTTTGAGACCTATAGTGGAGAAGGAAATATCTTCACATAAGAACTATGCAGAAGAATTCTGCGAAACTACTTTCTGATGTTTGCATCCATCTCACAGAGTAGAACCTTTCTTTTGATTGAAC	TR:VR	111:6	61:0
chr5	97806036	i_1233	T	<INS>	.	PASS	END=97806039;SVTYPE=INS;SVINSLEN=82;SVINSSEQ=AATAAAAAAAAAAAAAAAAAAAAAAATAACAATAAAATGAGATAAAATCTACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	33:9	21:0
chr8	75391739	i_1385	C	<INS>	.	PASS	END=75391739;SVTYPE=INS;SVINSLEN=444;SVINSSEQ=TAATGCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAGCATATTTTTTTTTTTATTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTTCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAATATTCCATGGTGTAT	TR:VR	48:8	20:0
chr9	21492137	r_531_0	T	T]chr9:21492549]	.	PASS	SVTYPE=BND;MATEID=r_531_1	TR:VR	29:10	12:0
chr9	21492549	r_531_1	T	T]chr9:21492137]	.	PASS	SVTYPE=BND;MATEID=r_531_0	TR:VR	29:10	12:0
chrX	125566070	i_1547	A	<INS>	.	PASS	END=125566082;SVTYPE=INS;SVINSLEN=300;SVINSSEQ=GGTCCAGGCCAGGTGCAGTGGCTCACACCTGTAATCTCAGCATTTTGAGAGGCCAAGGCGGACGGATCACGAGGTCAGGAGATCGAGACGATCCTGGCTAACATGGTGAAACCCCGTCTCTATTAAAAATACAAAAAATTAGCCGGGCATGGTGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCAGAGGCAGAGCTTGCAGTGAGCCAAGATCGTATCACTGCACTCCAGGATGGGTGACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAT	TR:VR	27:4	15:0
chr1	156088195	r_23	T	<DUP>	.	PASS	END=156101442;SVTYPE=DUP;SVLEN=13247	TR:VR	54:6	22:0
chr15	49050761	r_97_0	A	]chr5:52531092]CC	.	PASS	SVTYPE=BND;MATEID=r_97_1;SVINSLEN=1;SVINSSEQ=C	TR:VR	76:5	27:0
chr5	52531092	r_97_1	C	CG[chr15:49050761[	.	PASS	SVTYPE=BND;MATEID=r_97_0;SVINSLEN=1;SVINSSEQ=G	TR:VR	76:5	27:0
chr17	21756066	r_125	C	<DEL>	.	Too_low_VAF	END=26618719;SVTYPE=DEL;SVLEN=-4862653	TR:VR	131:5	278:0
chr17	80260104	r_151_0	G	G[chr9:127571839[	.	PASS	SVTYPE=BND;MATEID=r_151_1	TR:VR	82:8	23:0
chr9	127571839	r_151_1	A	]chr17:80260104]A	.	PASS	SVTYPE=BND;MATEID=r_151_0	TR:VR	82:8	23:0
chr2	116934011	r_247_0	C	C]chr2:116935691]	.	PASS	SVTYPE=BND;MATEID=r_247_1	TR:VR	89:14	17:0
chr2	116935691	r_247_1	G	G]chr2:116934011]	.	PASS	SVTYPE=BND;MATEID=r_247_0	TR:VR	89:14	17:0
chr2	121336001	r_302_0	C	C]chr4:135663605]	.	PASS	SVTYPE=BND;MATEID=r_302_1	TR:VR	162:11	23:0
chr4	135663605	r_302_1	A	A]chr2:121336001]	.	PASS	SVTYPE=BND;MATEID=r_302_0	TR:VR	162:11	23:0
chr2	87410908	d_925	G	<DEL>	.	Too_small_size;Too_low_VAF	END=87410952;SVTYPE=DEL;SVLEN=-44;SVINSLEN=1;SVINSSEQ=C	TR:VR	87:3	33:0
chr22	46095604	i_996	A	<INS>	.	PASS	END=46095604;SVTYPE=INS;SVINSLEN=162;SVINSSEQ=GGGCATTGGGGTGGTCCCAGCCAGCCCAGGGCGGCAGGTGAGGGCATTGGGGTGGTCCCAGCCAGCCCAGGGCGGCAGGTGAGGGCATTGGGGTGGTCCCAGCCCAGGGCGGCAGGTGAGGGCATTGGGGTGGTCCCAGGCAGCCCGGGGCAGCAGGTGAGG	TR:VR	46:14	11:0
chr5	98075907	i_1234	T	<INS>	.	PASS	END=98075907;SVTYPE=INS;SVINSLEN=339;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATCGTTTGACTTGATTTATTACACAACAAAACCACCAGAAAATCAATGAGACAACAGACATAGCCACCGGTGTTGTTACTTATAGTCTGCTATTTTATCCATGACATCTTCAGGCTGACTGAAAATAATAGCACATATTGAAACTTGCATTCCGTTTCACCACTGAAAGTCTTTGGACAGTCTTCCTTGGTCATTCAGGGTTTTGGTGAGTTTTTCTAGTTCCCTTTAGGACTTACCAAGCACTCTTTTAGGTTCACAAAGGGT	TR:VR	29:8	14:0
chr8	40161160	r_464_0	C	[chr8:108392247[TTAT	.	PASS	SVTYPE=BND;MATEID=r_464_1;SVINSLEN=3;SVINSSEQ=TTA	TR:VR	87:19	29:0
chr8	108392247	r_464_1	T	[chr8:40161160[TAAT	.	PASS	SVTYPE=BND;MATEID=r_464_0;SVINSLEN=3;SVINSSEQ=TAA	TR:VR	87:19	29:0
chr9	22917026	r_532_0	T	[chr9:28924865[T	.	PASS	SVTYPE=BND;MATEID=r_532_1	TR:VR	36:6	23:0
chr9	28924865	r_532_1	T	[chr9:22917026[T	.	PASS	SVTYPE=BND;MATEID=r_532_0	TR:VR	36:6	23:0
chrX	1263861	d_1684	C	<DEL>	.	PASS	END=1264369;SVTYPE=DEL;SVLEN=-508;SVINSLEN=52;SVINSSEQ=TCTACATCAATGTCAAAAGGAAGATATGAGCCTTTGACAAGAATATCCACCA	TR:VR	30:3	8:0
chr14	25210551	r_77_0	T	TCACCCACTCCCGATAGAGCAGTTTTCATACACTGATTTTGTAGAATCTGCTTGTGGATATTTGGAGCTCTTTGAGGAATTCGTTGTAAACAGGATATCCTCACATACAAACTAGACAGAAGCATTCTCAGAAACAGCTCTGTGA]chrUn_KI270538v1:63213]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_77_1;SVINSLEN=144;SVINSSEQ=CACCCACTCCCGATAGAGCAGTTTTCATACACTGATTTTGTAGAATCTGCTTGTGGATATTTGGAGCTCTTTGAGGAATTCGTTGTAAACAGGATATCCTCACATACAAACTAGACAGAAGCATTCTCAGAAACAGCTCTGTGA	TR:VR	88:4	43:0
chrUn_KI270538v1	63213	r_77_1	A	ATCACAGAGCTGTTTCTGAGAATGCTTCTGTCTAGTTTGTATGTGAGGATATCCTGTTTACAACGAATTCCTCAAAGAGCTCCAAATATCCACAAGCAGATTCTACAAAATCAGTGTATGAAAACTGCTCTATCGGGAGTGGGTG]chr14:25210551]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_77_0;SVINSLEN=144;SVINSSEQ=TCACAGAGCTGTTTCTGAGAATGCTTCTGTCTAGTTTGTATGTGAGGATATCCTGTTTACAACGAATTCCTCAAAGAGCTCCAAATATCCACAAGCAGATTCTACAAAATCAGTGTATGAAAACTGCTCTATCGGGAGTGGGTG	TR:VR	88:4	43:0
chr16	35681875	i_417	C	<INS>	.	PASS	END=35681944;SVTYPE=INS;SVINSLEN=305;SVINSSEQ=TGAGTTTAACTTTTGTTTTTATTTAACAGGTTGGCAACACTCTTCTGTAAAATCTACAAAAGACATTTCTGAGATTATTAAGGTGTACTGAATAACAAAATATCCCATGATAACAACTAAAAACAAGCTATTCGTGAAAATGCTTTGTGATGTGTAAATTCATCTTACAGAGTTAAACTTCTGTTTTGATTTGACAGGTTAAAAACACTCGTTTTATACTATCAGCAAGCAGACATTTCTGAGTCCATCGAGGCCAACAGTGAAAAACTGAAATTTCCATGATAAAAACCAGAAACACCAGCTAT	TR:VR	37:4	10:0
chr17	80260199	r_152_0	G	]chr2:20453062]C	.	PASS	SVTYPE=BND;MATEID=r_152_1	TR:VR	90:6	23:0
chr2	20453062	r_152_1	C	C[chr17:80260199[	.	PASS	SVTYPE=BND;MATEID=r_152_0	TR:VR	90:6	23:0
chr2	116935115	r_248_0	G	[chr2:121089810[C	.	PASS	SVTYPE=BND;MATEID=r_248_1	TR:VR	254:14	27:0
chr2	121089810	r_248_1	C	[chr2:116935115[C	.	PASS	SVTYPE=BND;MATEID=r_248_0	TR:VR	254:14	27:0
chr2	121379458	r_303_0	T	[chr4:173905746[G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_303_1	TR:VR	185:7	20:0
chr4	173905746	r_303_1	G	[chr2:121379458[G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_303_0	TR:VR	185:7	20:0
chr2	87414365	d_926	C	<INS>	.	Too_low_VAF	END=87414350;SVTYPE=INS;SVINSLEN=153;SVINSSEQ=CAGCCAAGCCAGCCATGCCTGTAGCAAGCCAAGCCAGCCAAGCCAGGCAAGACAGCCAAGCCAGCCAGGCAGCCAAGCCAGCCAAGCCACCAAGCCAGCCAAGCCACCCAGCCAGCCAAGCCAATGAAGCCAGCCAGCCAGCCCAGCCTGCCA	TR:VR	116:3	51:0
chr21	45988415	i_942	A	<INS>	.	PASS	END=45988415;SVTYPE=INS;SVINSLEN=356;SVINSSEQ=CGGCGGGGCTCCAGATGGAGGGGACGGCGGGGTCCAGATGGGAGGGGACGGCGAGGGCTTCCAGATGGAGGGGACGGCGGGGGTCCAGATGGAGGGGGACGGCGGGGCTCCAGATGGAGGGGACGGCGGGGGTCCAGATGGAGGGGACGGCGGGGTCCAGATGGAGGGGACGGCGGGGTCCAGATGGAGGGGACGGCGGGGTCCAGATGGAGGGGACGGCGGGGTCCAGATGGAGGGGATGTCGTGGGGCTCCAGATGGAGGGGACGGCGGGGTCCAGATGGAGGGGACGGCGGGGTCTCAGAGGCCGGCGGGGTCCAGATGGAGGGGACGGCGAGGTCCAGATGGAGGGGATGTC	TR:VR	47:7	6:0
chr5	47048076	d_1368	C	<INS>	.	PASS	END=47048169;SVTYPE=INS;SVINSLEN=93;SVINSSEQ=TTTTTGTAATATCTGCAAGTGGATATTTGGAGCGATTTGAGGCCTAAGATGGAAAAGGAAATATCTTCACATACAAACTAGACAGAAGCATTC	TR:VR	14:5	6:0
chr8	76756721	r_501	C	<DEL>	.	PASS	END=131970054;SVTYPE=DEL;SVLEN=-55213333	TR:VR	91:8	24:0
chr9	26412740	r_533	A	<DUP>	.	PASS	END=31827015;SVTYPE=DUP;SVLEN=5414275;SVINSLEN=25;SVINSSEQ=TCATATGCCTGTTTGTCATTTGTAT	TR:VR	63:4	30:0
chr1	157971014	r_25	C	<DUP>	.	PASS	END=158024016;SVTYPE=DUP;SVLEN=53002	TR:VR	60:6	17:0
chr1	2664812	d_10	T	<DEL>	.	Too_low_VAF	END=2664904;SVTYPE=DEL;SVLEN=-92;SVINSLEN=11;SVINSSEQ=GAGCATCTGAC	TR:VR	220:8	74:1
chr16	35714977	r_117	C	<DEL>	.	PASS	END=35807696;SVTYPE=DEL;SVLEN=-92719;SVINSLEN=119;SVINSSEQ=AAGAATCTCACCCACTAGAATGCCTGGGATCACTCGGATGTCTCTATTATTAGATTGCCTGGGTTTAGCTAGGAGTCTCTCCCATTTGCCTGGGGCTGCTGGTCCTATAGTAGGGTCTA	TR:VR	57:6	36:0
chr2	121417721	r_304_0	C	C]chr4:136580786]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_304_1	TR:VR	185:4	21:0
chr4	136580786	r_304_1	A	A]chr2:121417721]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_304_0	TR:VR	185:4	21:0
chr3	108044902	r_369	A	<DEL>	.	PASS	END=129164556;SVTYPE=DEL;SVLEN=-21119654	TR:VR	86:6	25:0
chr4	56685454	r_387_0	C	C[chr9:31816073[	.	PASS	SVTYPE=BND;MATEID=r_387_1	TR:VR	68:10	32:0
chr9	31816073	r_387_1	T	]chr4:56685454]T	.	PASS	SVTYPE=BND;MATEID=r_387_0	TR:VR	68:10	32:0
chr5	47052785	i_1212	T	<INS>	.	PASS	END=47052785;SVTYPE=INS;SVINSLEN=174;SVINSSEQ=TTTGGATGGGTCATTCAACTCACAGATTTGAGTATTCCTTTTGAGAGAGCAGTTTTGAAACAGTCTTTTTGTAGTATCTGCAAGTGGATAGTTTTAGCGATGTGAGGCCTAAGATGGAAAAGGAAATATCTACACACATACAAACTAAACAGAAGCATTCTCAGAAACTCCTCT	TR:VR	16:4	7:0
chr8	76988952	r_502_0	G	[chr8:143073912[CTG	.	PASS	SVTYPE=BND;MATEID=r_502_1;SVINSLEN=2;SVINSSEQ=CT	TR:VR	68:15	21:0
chr8	143073912	r_502_1	G	[chr8:76988952[AGG	.	PASS	SVTYPE=BND;MATEID=r_502_0;SVINSLEN=2;SVINSSEQ=AG	TR:VR	68:15	21:0
chr9	26811764	r_534_0	A	A]chr9:42988083]	.	PASS	SVTYPE=BND;MATEID=r_534_1	TR:VR	38:8	29:0
chr9	42988083	r_534_1	C	C]chr9:26811764]	.	PASS	SVTYPE=BND;MATEID=r_534_0	TR:VR	38:8	29:0
chr1	16227835	r_1	G	<DUP>	.	Too_low_VAF	END=16476376;SVTYPE=DUP;SVLEN=248541	TR:VR	92:4	23:0
chr15	54183066	r_99_0	G	G[chr7:103135262[	.	PASS	SVTYPE=BND;MATEID=r_99_1	TR:VR	65:15	37:0
chr7	103135262	r_99_1	G	]chr15:54183066]G	.	PASS	SVTYPE=BND;MATEID=r_99_0	TR:VR	65:15	37:0
chr2	117500783	r_249	A	<DUP>	.	Too_low_VAF	END=121696903;SVTYPE=DUP;SVLEN=4196120	TR:VR	231:9	24:0
chr2	121730763	r_305_0	T	[chr9:28780527[G	.	PASS	SVTYPE=BND;MATEID=r_305_1	TR:VR	164:9	30:0
chr9	28780527	r_305_1	G	[chr2:121730763[G	.	PASS	SVTYPE=BND;MATEID=r_305_0	TR:VR	164:9	30:0
chr20	28940389	r_326_0	G	[chr20:29211312[TTGGAGCGCTTTGCGGCCAGTGGTAGAAAAACAAATATCTTCATATAAAATCTAGACAGAAGCAATCTGGGAAACTTCTTTGTGATGTGTGCTTTCATCTCACAGAGTTAAACCTTTGTTTTGATTGAGCAGTTTTGAAACTCTTTCATCTCACAGAGTTAAACCTTTCTTTTGATTGAGCAT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_326_1;SVINSLEN=182;SVINSSEQ=TTGGAGCGCTTTGCGGCCAGTGGTAGAAAAACAAATATCTTCATATAAAATCTAGACAGAAGCAATCTGGGAAACTTCTTTGTGATGTGTGCTTTCATCTCACAGAGTTAAACCTTTGTTTTGATTGAGCAGTTTTGAAACTCTTTCATCTCACAGAGTTAAACCTTTCTTTTGATTGAGCA	TR:VR	131:3	40:0
chr20	29211312	r_326_1	T	[chr20:28940389[TGCTCAATCAAAAGAAAGGTTTAACTCTGTGAGATGAAAGAGTTTCAAAACTGCTCAATCAAAACAAAGGTTTAACTCTGTGAGATGAAAGCACACATCACAAAGAAGTTTCCCAGATTGCTTCTGTCTAGATTTTATATGAAGATATTTGTTTTTCTACCACTGGCCGCAAAGCGCTCCAAT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_326_0;SVINSLEN=182;SVINSSEQ=TGCTCAATCAAAAGAAAGGTTTAACTCTGTGAGATGAAAGAGTTTCAAAACTGCTCAATCAAAACAAAGGTTTAACTCTGTGAGATGAAAGCACACATCACAAAGAAGTTTCCCAGATTGCTTCTGTCTAGATTTTATATGAAGATATTTGTTTTTCTACCACTGGCCGCAAAGCGCTCCAA	TR:VR	131:3	40:0
chr8	126360891	r_523	C	<DEL>	.	Too_low_VAF	END=126757761;SVTYPE=DEL;SVLEN=-396870	TR:VR	151:6	30:0
chr8	77121193	r_503	G	<DUP>	.	PASS	END=140280123;SVTYPE=DUP;SVLEN=63158930	TR:VR	67:10	22:0
chr9	28924876	r_535_0	C	C]chr9:28925001]	.	PASS	SVTYPE=BND;MATEID=r_535_1	TR:VR	22:6	11:0
chr9	28925001	r_535_1	A	A]chr9:28924876]	.	PASS	SVTYPE=BND;MATEID=r_535_0	TR:VR	22:6	11:0
chrUn_GL000224v1	151070	d_1600	A	<DEL>	.	Too_low_VAF	END=151120;SVTYPE=DEL;SVLEN=-50	TR:VR	66:3	34:0
chr1	16227890	r_2_0	C	]chr20:62501165]G	.	PASS	SVTYPE=BND;MATEID=r_2_1	TR:VR	82:5	23:0
chr20	62501165	r_2_1	G	G[chr1:16227890[	.	PASS	SVTYPE=BND;MATEID=r_2_0	TR:VR	82:5	23:0
chr14	45521179	r_78	T	<DEL>	.	PASS	END=45608027;SVTYPE=DEL;SVLEN=-86848;SVINSLEN=32;SVINSSEQ=CCCTTCTCACTGCATTGCCTTCCTTCCTTTAT	TR:VR	48:8	28:0
chr15	54183084	r_100_0	A	]chr7:103135254]AGT	.	PASS	SVTYPE=BND;MATEID=r_100_1;SVINSLEN=2;SVINSSEQ=AG	TR:VR	65:6	37:0
chr7	103135254	r_100_1	T	TCT[chr15:54183084[	.	PASS	SVTYPE=BND;MATEID=r_100_0;SVINSLEN=2;SVINSSEQ=CT	TR:VR	65:6	37:0
chr17_GL000205v2_random	32681	d_780	C	<INS>	.	PASS	END=32718;SVTYPE=INS;SVINSLEN=84;SVINSSEQ=CGAAATCCTATTGAGGGAAAAACTTTTAGACTCATGTAGCAGTGTTCTGTAATCGTACGTGAGGGACAAACACTGAGAACCCAA	TR:VR	160:9	54:1
chr2	117866305	r_250	G	<DUP>	.	Too_low_VAF	END=120315653;SVTYPE=DUP;SVLEN=2449348	TR:VR	230:3	27:0
chr2	121831708	r_306_0	C	]chr4:133489159]A	.	PASS	SVTYPE=BND;MATEID=r_306_1	TR:VR	145:8	28:0
chr4	133489159	r_306_1	A	A[chr2:121831708[	.	PASS	SVTYPE=BND;MATEID=r_306_0	TR:VR	145:8	28:0
chr8	12725937	r_440	T	<DUP>	.	PASS	END=14510928;SVTYPE=DUP;SVLEN=1784991	TR:VR	38:10	23:0
chr8	77298581	r_504_0	C	[chr8:140280191[G	.	PASS	SVTYPE=BND;MATEID=r_504_1	TR:VR	72:8	17:0
chr8	140280191	r_504_1	G	[chr8:77298581[G	.	PASS	SVTYPE=BND;MATEID=r_504_0	TR:VR	72:8	17:0
chr9	31540727	r_536_0	G	[chr9:31638444[A	.	PASS	SVTYPE=BND;MATEID=r_536_1	TR:VR	67:5	29:0
chr9	31638444	r_536_1	A	[chr9:31540727[A	.	PASS	SVTYPE=BND;MATEID=r_536_0	TR:VR	67:5	29:0
chr1	16228050	r_3_0	G	G]chr9:125332656]	.	PASS	SVTYPE=BND;MATEID=r_3_1	TR:VR	54:5	20:0
chr9	125332656	r_3_1	A	A]chr1:16228050]	.	PASS	SVTYPE=BND;MATEID=r_3_0	TR:VR	54:5	20:0
chr2	121889702	r_307_0	G	G]chr4:145618266]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_307_1	TR:VR	126:6	30:0
chr4	145618266	r_307_1	A	A]chr2:121889702]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_307_0	TR:VR	126:6	30:0
chr20	29231456	i_802	G	<INS>	.	Too_small_size;Too_low_VAF	END=29231456;SVTYPE=INS;SVINSLEN=23;SVINSSEQ=GTTCAACTCTGTGAGATGAATGC	TR:VR	87:3	23:0
chr5	47060641	d_1370	T	<INS>	.	PASS	END=47060751;SVTYPE=INS;SVINSLEN=287;SVINSSEQ=TCAACTCACAGAGCTGAACCGTTCCTTTAAAGAGAGCAGTTTTGAAACAGTCTTTTTGTAGTATCTGCAAGTGGATATTTGGAGAGATTTGAGGCCTATGATGGAAAAGGAAATATCTTCACTTACAAAAACTATTCAGAAGTATTCTCGGAAACTGCTTTGTGATGTGTGCATTCAACTAGCACACTTGAACCTTTCTGTTGATAGAGCAGTGTTGAGACACACTTTTTGTAGGATTCTGCAAGTGTTCATTTGGAGCACTTTGTTGCATATGGTGGAAAACGGAA	TR:VR	21:3	7:0
chr8	77303315	r_505	C	<DEL>	.	PASS	END=134369018;SVTYPE=DEL;SVLEN=-57065703	TR:VR	124:31	15:0
chr14	73582509	r_79	T	<DUP>	.	PASS	END=73703750;SVTYPE=DUP;SVLEN=121241	TR:VR	54:16	24:0
chr3	90472170	i_1057	C	<INS>	.	PASS	END=90472170;SVTYPE=INS;SVINSLEN=224;SVINSSEQ=TAGGAAAAAAAGTAGTTGCAGATTTACTGAAAAGAGTGTTTCAAAACTGCTCTATGAAAATGTATGTTCAACACTGAGAATTGAATGCAAACATCTCAAAGAAGTTTCTGAAAATCCTTACTGTCAAGTTTTTGTGTGTAGATATTTCTTTTTCCACAATAGTCCCCAAAGCTCTCCAAATGTCCACTTGCAGATTCTACAAAAAGCGTGTTTCAAAACTGCTC	TR:VR	50:6	8:0
chr4	29103864	i_1125	A	<INS>	.	PASS	END=29103864;SVTYPE=INS;SVINSLEN=193;SVINSSEQ=ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAATCGTTTGACTTGATTTATTACACAACAAAACCACCAGAAAATCAATGAGACAACAGACATAGCCACCGGTGTTGTTACTTATAGTCTGCTATTTTATCCATGACATA	TR:VR	32:7	15:0
chr4	76233715	r_388	A	<DUP>	.	PASS	END=76252911;SVTYPE=DUP;SVLEN=19196	TR:VR	39:7	24:0
chr8	77728906	r_506	A	<DUP>	.	PASS	END=134370399;SVTYPE=DUP;SVLEN=56641493	TR:VR	121:30	21:0
chr9	33305136	r_537_0	A	A]chr9:33703353]	.	PASS	SVTYPE=BND;MATEID=r_537_1	TR:VR	57:4	32:0
chr9	33703353	r_537_1	G	G]chr9:33305136]	.	PASS	SVTYPE=BND;MATEID=r_537_0	TR:VR	57:4	32:0
chr17_GL000205v2_random	33197	i_518	C	<INS>	.	Too_low_VAF	END=33198;SVTYPE=INS;SVINSLEN=200;SVINSSEQ=AGTGTTCTGGAATCCTATGTGAGGGACAAATATTCAGGACCCTCGCAGCAGTGTTCTGGAATCCTGTGTGAGGGACAAACATTCAGATACAGAGAAGGAATGTTCTGGACCTCATCTATGTCACCAAACCTTCAGACCCTTCGCAGCATTGTTCTGGAATCCCAGAATGTGTGAGACAAACATTCAGACGCCAGCAGCAG	TR:VR	160:3	55:1
chr18	53781054	i_544	A	<INS>	.	PASS	END=53781054;SVTYPE=INS;SVINSLEN=998;SVINSSEQ=GAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCACTTGATTTTTAGTAGATTTTATCTCATTTTATTGTTATTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGAACTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTG	TR:VR	31:5	15:0
chr2	122302543	r_308_0	A	A]chr2:123193425]	.	PASS	SVTYPE=BND;MATEID=r_308_1	TR:VR	169:107	24:0
chr2	123193425	r_308_1	C	C]chr2:122302543]	.	PASS	SVTYPE=BND;MATEID=r_308_0	TR:VR	169:107	24:0
chr3	113063775	r_370	G	<DUP>	.	PASS	END=113350873;SVTYPE=DUP;SVLEN=287098	TR:VR	81:8	32:0
chr8	79405667	r_507_0	A	[chr8:79406244[A	.	PASS	SVTYPE=BND;MATEID=r_507_1	TR:VR	59:17	12:0
chr8	79406244	r_507_1	A	[chr8:79405667[A	.	PASS	SVTYPE=BND;MATEID=r_507_0	TR:VR	59:17	12:0
chr9	34183193	r_538_0	G	G]chr9:42981411]	.	PASS	SVTYPE=BND;MATEID=r_538_1	TR:VR	55:8	28:0
chr9	42981411	r_538_1	C	C]chr9:34183193]	.	PASS	SVTYPE=BND;MATEID=r_538_0	TR:VR	55:8	28:0
chr1	184940186	r_26	G	<DUP>	.	PASS	END=185132438;SVTYPE=DUP;SVLEN=192252	TR:VR	85:7	33:0
chr15	58467139	r_101_0	T	[chr2:69707072[G	.	PASS	SVTYPE=BND;MATEID=r_101_1	TR:VR	66:6	21:0
chr2	69707072	r_101_1	G	[chr15:58467139[G	.	PASS	SVTYPE=BND;MATEID=r_101_0	TR:VR	66:6	21:0
chr17	26655336	r_127_0	G	[chr17:61174389[CAGTTTTGAAACACTCTTTTTGTAGATTCTGCAAGTGGACATTTAGAGTGCTTTGAGGCCTATGTTGAAGAGGGGAATAGCTTCACATGAAAAGTAGACAGAAGCATTCTCAGAAACTTCTTTGTC	.	PASS	SVTYPE=BND;MATEID=r_127_1;SVINSLEN=125;SVINSSEQ=CAGTTTTGAAACACTCTTTTTGTAGATTCTGCAAGTGGACATTTAGAGTGCTTTGAGGCCTATGTTGAAGAGGGGAATAGCTTCACATGAAAAGTAGACAGAAGCATTCTCAGAAACTTCTTTGT	TR:VR	81:14	23:0
chr17	61174389	r_127_1	C	[chr17:26655336[ACAAAGAAGTTTCTGAGAATGCTTCTGTCTACTTTTCATGTGAAGCTATTCCCCTCTTCAACATAGGCCTCAAAGCACTCTAAATGTCCACTTGCAGAATCTACAAAAAGAGTGTTTCAAAACTGC	.	PASS	SVTYPE=BND;MATEID=r_127_0;SVINSLEN=125;SVINSSEQ=ACAAAGAAGTTTCTGAGAATGCTTCTGTCTACTTTTCATGTGAAGCTATTCCCCTCTTCAACATAGGCCTCAAAGCACTCTAAATGTCCACTTGCAGAATCTACAAAAAGAGTGTTTCAAAACTG	TR:VR	81:14	23:0
chr3	113700761	r_371	A	<DUP>	.	PASS	END=113991438;SVTYPE=DUP;SVLEN=290677	TR:VR	60:6	21:0
chr4	34084397	i_1127	T	<INS>	.	PASS	END=34084397;SVTYPE=INS;SVINSLEN=428;SVINSSEQ=AAAGACTTTGGAAGCTATATACACCATGGAATATTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGAAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAATAAAAAAAAAATATGCTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	27:7	11:0
chr5	139561507	i_1255	C	<INS>	.	PASS	END=139561507;SVTYPE=INS;SVINSLEN=199;SVINSSEQ=GCTGATCCTGTTGGCCAGGCTGGTCTTGAACTCCTGGCCTCATGATTCATCTGCCTCAGACTACCAAAGTGCTGGGATTACAGGTGTGAGCCGCTGCGCCTGGCCTTAAGTGCTTTCTTAAAAAATAGTTTAGTGTATTTTAATAGCAAACTCAAAGGAACAGTACAGAGACAGACAACATTAAAAACATACTTGCATG	TR:VR	35:13	14:0
chr9	36226739	r_539	T	<DUP>	.	PASS	END=36351990;SVTYPE=DUP;SVLEN=125251	TR:VR	60:8	25:0
chr1	186391282	r_27_0	T	]chr4:55399935]C	.	PASS	SVTYPE=BND;MATEID=r_27_1	TR:VR	66:5	25:0
chr4	55399935	r_27_1	C	C[chr1:186391282[	.	PASS	SVTYPE=BND;MATEID=r_27_0	TR:VR	66:5	25:0
chr15	58492791	r_102_0	C	C]chr2:69741129]	.	PASS	SVTYPE=BND;MATEID=r_102_1	TR:VR	67:8	29:0
chr2	69741129	r_102_1	G	G]chr15:58492791]	.	PASS	SVTYPE=BND;MATEID=r_102_0	TR:VR	67:8	29:0
chr2	118424548	r_251_0	T	[chr9:29305926[AAATTTTAGTGTTTGGGAGCAGCTATG	.	PASS	SVTYPE=BND;MATEID=r_251_1;SVINSLEN=26;SVINSSEQ=AAATTTTAGTGTTTGGGAGCAGCTAT	TR:VR	126:7	34:0
chr9	29305926	r_251_1	G	[chr2:118424548[ATAGCTGCTCCCAAACACTAAAATTTG	.	PASS	SVTYPE=BND;MATEID=r_251_0;SVINSLEN=26;SVINSSEQ=ATAGCTGCTCCCAAACACTAAAATTT	TR:VR	126:7	34:0
chr2	219474071	r_319	A	<DUP>	.	PASS	END=219615835;SVTYPE=DUP;SVLEN=141764	TR:VR	81:14	25:0
chr5	139561979	d_1412	A	<DEL>	.	Too_small_size	END=139562022;SVTYPE=DEL;SVLEN=-43	TR:VR	35:12	14:0
chr5	47124255	i_1217	A	<INS>	.	PASS	END=47124255;SVTYPE=INS;SVINSLEN=271;SVINSSEQ=ACCTTTCTTTTGAGAGATCAGTTTTGCAAGAGTCTTTTTGTAGTATCTCCAAGTGGATATTTGGAGTGATTTGAGGCCTAAGATGGAAAAGAAAATATCTTCACATAAAAACTAGACGGAAGCATTCGCAGAAACTCCTTTGTGTTGTGTGTGTTCATTTCACAGAGTTGAATCTTTCTTTTTTTTTAATTTTTTTTTTAATTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTGTACA	TR:VR	58:3	24:0
chrY	56837739	d_1760	G	<DEL>	.	Too_low_VAF	END=56837876;SVTYPE=DEL;SVLEN=-137	TR:VR	459:4	154:0
chr1	186687709	r_28_0	G	G[chr4:55378084[	.	PASS	SVTYPE=BND;MATEID=r_28_1	TR:VR	52:4	33:0
chr4	55378084	r_28_1	G	]chr1:186687709]G	.	PASS	SVTYPE=BND;MATEID=r_28_0	TR:VR	52:4	33:0
chr2	118430563	r_252_0	G	GTAGA]chr9:30325029]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_252_1;SVINSLEN=4;SVINSSEQ=TAGA	TR:VR	112:5	27:0
chr9	30325029	r_252_1	T	TTCTA]chr2:118430563]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_252_0;SVINSLEN=4;SVINSSEQ=TCTA	TR:VR	112:5	27:0
chr2	125590062	r_309	T	<DEL>	.	Too_low_VAF	END=125592628;SVTYPE=DEL;SVLEN=-2566	TR:VR	75:3	17:0
chr22	49029647	r_347_0	G	[chr4:185239771[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_347_1	TR:VR	81:3	41:0
chr4	185239771	r_347_1	T	[chr22:49029647[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_347_0	TR:VR	81:3	41:0
chr5	139562250	r_406	C	<DEL>	.	PASS	END=139610152;SVTYPE=DEL;SVLEN=-47902	TR:VR	55:12	27:0
chr8	8091763	r_437_0	A	ACACAAAATTCC]chr8:12570301]	.	PASS	SVTYPE=BND;MATEID=r_437_1;SVINSLEN=11;SVINSSEQ=CACAAAATTCC	TR:VR	57:3	40:0
chr8	12570301	r_437_1	G	GGGAATTTTGTG]chr8:8091763]	.	PASS	SVTYPE=BND;MATEID=r_437_0;SVINSLEN=11;SVINSSEQ=GGAATTTTGTG	TR:VR	57:3	40:0
chr13	112779869	r_76	A	<DEL>	.	PASS	END=113054521;SVTYPE=DEL;SVLEN=-274652;SVINSLEN=15;SVINSSEQ=AAATTCAAAATTTGA	TR:VR	28:6	23:0
chr15	70666821	r_103	T	<DUP>	.	PASS	END=70894902;SVTYPE=DUP;SVLEN=228081	TR:VR	66:6	25:0
chr2	118436375	r_253_0	A	]chr9:30828442]A	.	PASS	SVTYPE=BND;MATEID=r_253_1	TR:VR	124:9	27:0
chr9	30828442	r_253_1	A	A[chr2:118436375[	.	PASS	SVTYPE=BND;MATEID=r_253_0	TR:VR	124:9	27:0
chr2	125591336	r_310_0	T	T]chr2:125592791]	.	PASS	SVTYPE=BND;MATEID=r_310_1	TR:VR	74:44	19:0
chr2	125592791	r_310_1	A	A]chr2:125591336]	.	PASS	SVTYPE=BND;MATEID=r_310_0	TR:VR	74:44	19:0
chr4	39446925	r_384	A	<DUP>	.	PASS	END=39667327;SVTYPE=DUP;SVLEN=220402	TR:VR	70:6	22:0
chr5	139615907	d_1413	C	<DEL>	.	PASS	END=139617125;SVTYPE=DEL;SVLEN=-1218	TR:VR	38:11	15:0
chr8	81820812	r_508_0	A	A]chr8:81875394]	.	PASS	SVTYPE=BND;MATEID=r_508_1	TR:VR	115:7	17:0
chr8	81875394	r_508_1	A	A]chr8:81820812]	.	PASS	SVTYPE=BND;MATEID=r_508_0	TR:VR	115:7	17:0
chr2	108783403	r_194_0	T	[chrX:77025639[C	.	PASS	SVTYPE=BND;MATEID=r_194_1	TR:VR	74:5	24:0
chrX	77025639	r_194_1	C	[chr2:108783403[C	.	PASS	SVTYPE=BND;MATEID=r_194_0	TR:VR	74:5	24:0
chr2	118455819	r_254_0	T	T]chr9:29316530]	.	PASS	SVTYPE=BND;MATEID=r_254_1	TR:VR	130:9	27:0
chr9	29316530	r_254_1	A	A]chr2:118455819]	.	PASS	SVTYPE=BND;MATEID=r_254_0	TR:VR	130:9	27:0
chr22	49265450	d_1184	C	<DEL>	.	PASS	END=49265631;SVTYPE=DEL;SVLEN=-181;SVINSLEN=120;SVINSSEQ=TTCCCCGGTGGAGGGAGAGGAGGGAGACCCAGAGCTTCCCGGTGGAGGAGAGCGGGGAGGCCCAGAGCTTCCCGGTGGGAGGGAGAGGGGAGAGGCCCAGAGCTTCCCCGGTGGAGGAGA	TR:VR	55:3	10:0
chr5	142014070	d_1414	A	<DEL>	.	PASS	END=142015036;SVTYPE=DEL;SVLEN=-966	TR:VR	27:8	17:0
chr8	13550092	r_442	G	<DUP>	.	Too_low_VAF	END=44925050;SVTYPE=DUP;SVLEN=31374958	TR:VR	120:4	36:0
chr8	81959620	r_509_0	G	[chr8:111789635[A	.	PASS	SVTYPE=BND;MATEID=r_509_1	TR:VR	120:33	21:0
chr8	111789635	r_509_1	A	[chr8:81959620[A	.	PASS	SVTYPE=BND;MATEID=r_509_0	TR:VR	120:33	21:0
chr1	27853387	d_19	C	<DEL>	.	PASS	END=27854057;SVTYPE=DEL;SVLEN=-670;SVINSLEN=148;SVINSSEQ=AGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGGTCAGCCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCAGGAGGGAGGTGGGGGGGTCAGCGCCC	TR:VR	38:14	4:0
chr2	118505569	r_255_0	T	[chr2:118507108[G	.	PASS	SVTYPE=BND;MATEID=r_255_1	TR:VR	119:20	17:0
chr2	118507108	r_255_1	G	[chr2:118505569[G	.	PASS	SVTYPE=BND;MATEID=r_255_0	TR:VR	119:20	17:0
chr2	222499519	d_1010	G	<DEL>	.	PASS	END=222500152;SVTYPE=DEL;SVLEN=-633	TR:VR	19:5	21:0
chr3	11587	d_1212	C	<INS>	.	Too_low_VAF	END=11699;SVTYPE=INS;SVINSLEN=147;SVINSSEQ=CGCGCCGGCGCAGGCGCAGAGAGAGGCGCGCCGCGCCGGGCGCAGCGCAGAGAGGCGCGGCGCGCCGGCGCAGGCGCAGAGAGGCGCGCGCGCCGGCGAAGGGCGCAGAGAGAGCGCGCGCCGGCGCGGGCGCAGCGCAGAGAGCGA	TR:VR	135:3	65:1
chr5	47141587	d_1372	A	<INS>	.	PASS	END=47141588;SVTYPE=INS;SVINSLEN=270;SVINSSEQ=TTCGCAGAAACTCCTTTGTGTTGTGTGTGTTCATTTCACAGAGTTGAATCTTTCTTTTTTTTTTAATTTTTTTTTAATTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATCTTTCTTTTGATAGAGCAGTTTTGAAACGCTTCTTTTGTAGAATCTGCTTGTGGATATTTGGAGCTCTTTTAGGATTTCGTTGTAAACGGGATATCTTTGCATACAATCTAGTCAAAAGGAT	TR:VR	42:5	17:0
chr8	13550092	r_441	G	<DUP>	.	PASS	END=44123531;SVTYPE=DUP;SVLEN=30573439	TR:VR	109:6	32:0
chr8	81961135	r_510_0	C	C]chr8:143285891]	.	PASS	SVTYPE=BND;MATEID=r_510_1	TR:VR	144:36	22:0
chr8	143285891	r_510_1	T	T]chr8:81961135]	.	PASS	SVTYPE=BND;MATEID=r_510_0	TR:VR	144:36	22:0
chr1	27853478	d_20	T	<DEL>	.	PASS	END=27854137;SVTYPE=DEL;SVLEN=-659;SVINSLEN=89;SVINSSEQ=CAGCGCCCCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGTGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTG	TR:VR	39:11	4:0
chr18	6364457	r_155_0	A	[chr8:50731509[CTTCTGTT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_155_1;SVINSLEN=7;SVINSSEQ=CTTCTGT	TR:VR	88:3	28:0
chr8	50731509	r_155_1	T	[chr18:6364457[ACAGAAGT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_155_0;SVINSLEN=7;SVINSSEQ=ACAGAAG	TR:VR	88:3	28:0
chr19	2939083	i_583	T	<INS>	.	PASS	END=2939083;SVTYPE=INS;SVINSLEN=176;SVINSSEQ=GAGGGAATGACGCCATCCTTACCCAAGGAGGCAGTGAGGGAATGACACCACCCTTACCCAAGGAGGCAGTGAGGGAATGACGCCACCCTTACCCAAGGAGGCAGTGAGGGAATGACACCACCCTTACCCAAGGAGGCAGTGAGGGAATGACGCCACCCTTACCCAAGGAGGCAGTG	TR:VR	33:6	13:0
chr2	109558669	r_195_0	C	[chr2:110999695[A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_195_1	TR:VR	88:3	28:0
chr2	110999695	r_195_1	A	[chr2:109558669[A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_195_0	TR:VR	88:3	28:0
chr2	118540321	r_256_0	T	T[chrX:78225228[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_256_1	TR:VR	181:7	32:0
chrX	78225228	r_256_1	A	]chr2:118540321]A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_256_0	TR:VR	181:7	32:0
chr3	116399078	r_372	A	<DEL>	.	PASS	END=116827949;SVTYPE=DEL;SVLEN=-428871	TR:VR	69:4	30:0
chr6	124960989	r_418	T	<DUP>	.	PASS	END=125159237;SVTYPE=DUP;SVLEN=198248	TR:VR	59:9	31:0
chr7	361914	i_1322	C	<INS>	.	PASS	END=361914;SVTYPE=INS;SVINSLEN=368;SVINSSEQ=CTCAGCCTCCCTGTCCCGACTCCCTCCCTCCCACTCACGCCGCTGCCTCCCTGTCCCGACTCCCTCCCACTCACGCCTCAGCCTCCCTGTCCCGACTCCCCCTCCCACTCACGCCTCAGGCCTCCCTGTCCCGACTCCTCCCACTCACGCTCCGCCTCCCTGTCCGGACTCCCTCCCACTCACGCCTCAGCCTCCCTGTCCCGACTCCCCTCCCCACTCACGCCTCAGCCTCCCTGTCCCGACTCCCCTCCCACTCACGCCTCAGCCTCCCCTGTCCTGACTCCTCCCACCACGCCTCAGCCTCCTGTCCTGACTCCCTCCACTCACGCCTCAGCCTCCCTGTCCTGACTCCCTCCCACTCACGCCTC	TR:VR	37:7	11:0
chr8	13550262	r_443_0	T	T]chr8:143285103]	.	PASS	SVTYPE=BND;MATEID=r_443_1	TR:VR	91:22	33:0
chr8	143285103	r_443_1	G	G]chr8:13550262]	.	PASS	SVTYPE=BND;MATEID=r_443_0	TR:VR	91:22	33:0
chr8	43448954	r_465	A	<DUP>	.	PASS	END=73137206;SVTYPE=DUP;SVLEN=29688252	TR:VR	106:8	24:0
chr8	81976108	r_511	T	<DUP>	.	PASS	END=129045241;SVTYPE=DUP;SVLEN=47069133	TR:VR	114:36	32:0
chr2	118709735	r_257	C	<DUP>	.	Too_low_VAF	END=120195107;SVTYPE=DUP;SVLEN=1485372	TR:VR	332:13	24:0
chr2	89792980	d_934	A	<DEL>	.	PASS	END=89793732;SVTYPE=DEL;SVLEN=-752;SVINSLEN=187;SVINSSEQ=AACGATTCCATTCGATGATTCCATTCAATTCCATTCGATTATGATTGCATTTGATTCCATTCGCTGATTGCATTTGATTCCATTCGATGATAATTTCATTCGAGTCCATTCGACATTTCCATTCCATTCCATTCGAAGATGATTCCATTCGATTCCATTTGATGATTCTATTCGATTCTATTCGATC	TR:VR	66:12	18:0
chr22	49276647	i_1006	T	<INS>	.	PASS	END=49276647;SVTYPE=INS;SVINSLEN=114;SVINSSEQ=CGAGTTTTAAAGCTTTCTGCACACTTTATATAGAGATTTTAAGTATGACTTGTGCATCCTATGTATAGACTTTATACTTGCTTTGTGCTGTTAACGGTATCTTATTTTACATCA	TR:VR	43:3	7:0
chr3	116709335	r_373	T	<DEL>	.	PASS	END=116762761;SVTYPE=DEL;SVLEN=-53426	TR:VR	43:5	33:0
chr8	81976280	r_512	C	<DEL>	.	PASS	END=143285678;SVTYPE=DEL;SVLEN=-61309398	TR:VR	107:36	22:0
chrY	11304081	i_1567	T	<INS>	.	Too_low_VAF	END=11304081;SVTYPE=INS;SVINSLEN=284;SVINSSEQ=TGCATTCCAATCCATTCCATTCCACTCCAATTTTCCATTCCACTCCACTCCACTGAGGCCTGCTCCACTGCATTCCATTCCACTCCATTCTCACTCCATTCCATTCCACTGCACTCCTGGCCATTCCACTCCACTCCCACTTAAATGGCTCCCTCCCCCATTAACTTCCACTCCACTCCATTGTACACCTTTCCACCCCTGCTCCACTGCATTCCACTCCATTCCACTCAACACTTCTCAGAACATTCCTGGCCAAGACCATTCCATTCCAGATGCTAGGGTCT	TR:VR	522:8	197:1
chr1	201169430	r_29_0	C	]chr22:40998115]G	.	PASS	SVTYPE=BND;MATEID=r_29_1	TR:VR	77:5	29:0
chr22	40998115	r_29_1	G	G[chr1:201169430[	.	PASS	SVTYPE=BND;MATEID=r_29_0	TR:VR	77:5	29:0
chr10	24474375	r_36_0	A	[chr5:61155859[T	.	PASS	SVTYPE=BND;MATEID=r_36_1	TR:VR	59:8	31:0
chr5	61155859	r_36_1	T	[chr10:24474375[T	.	PASS	SVTYPE=BND;MATEID=r_36_0	TR:VR	59:8	31:0
chr13	113083800	d_302	T	<DEL>	.	PASS	END=113083847;SVTYPE=DEL;SVLEN=-47	TR:VR	27:9	17:0
chr17	82133593	d_759	G	<DEL>	.	PASS	END=82134403;SVTYPE=DEL;SVLEN=-810	TR:VR	37:5	11:0
chr17_GL000205v2_random	37104	d_786	G	<INS>	.	Too_low_VAF	END=37090;SVTYPE=INS;SVINSLEN=82;SVINSSEQ=GACAAACATTAAAACAACAGCGAAAGTGTTCTGGAATCCTATGTTATGAACAAACATTCAGACCCTCGTCGCAGTGTTCTGG	TR:VR	161:4	59:0
chr2	118867524	d_988	C	<INS>	.	Too_low_VAF	END=118867545;SVTYPE=INS;SVINSLEN=85;SVINSSEQ=ATATATTATATAATATATAACATATAATATATATTATATATAACAATATATAATATATAAATATATATTATATATTATATATAAT	TR:VR	145:3	13:0
chr4	99448520	r_389	T	<DUP>	.	PASS	END=99464475;SVTYPE=DUP;SVLEN=15955	TR:VR	44:4	31:0
chr5	149667983	r_407	C	<DUP>	.	PASS	END=150076930;SVTYPE=DUP;SVLEN=408947	TR:VR	76:11	26:0
chr6	134350343	r_419	T	<DUP>	.	PASS	END=134577403;SVTYPE=DUP;SVLEN=227060	TR:VR	54:6	32:0
chr8	136233516	r_524_0	A	A]chr8:141192462]	.	PASS	SVTYPE=BND;MATEID=r_524_1	TR:VR	47:18	26:0
chr8	141192462	r_524_1	G	G]chr8:136233516]	.	PASS	SVTYPE=BND;MATEID=r_524_0	TR:VR	47:18	26:0
chr8	8368831	r_438	T	<DUP>	.	PASS	END=17828917;SVTYPE=DUP;SVLEN=9460086	TR:VR	51:17	22:0
chr1	201169606	r_30_0	T	T]chr7:134637826]	.	PASS	SVTYPE=BND;MATEID=r_30_1	TR:VR	66:5	38:0
chr7	134637826	r_30_1	T	T]chr1:201169606]	.	PASS	SVTYPE=BND;MATEID=r_30_0	TR:VR	66:5	38:0
chr17	82161680	r_153	C	<DEL>	.	PASS	END=82181991;SVTYPE=DEL;SVLEN=-20311	TR:VR	65:6	23:0
chr2	111006924	r_196_0	C	C]chr2:111441357]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_196_1	TR:VR	83:4	33:0
chr2	111441357	r_196_1	C	C]chr2:111006924]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_196_0	TR:VR	83:4	33:0
chr2	1417264	d_899	T	<INS>	.	PASS	END=1417316;SVTYPE=INS;SVINSLEN=52;SVINSSEQ=GACTCACATCTGCAATCCCAACACAGTATCATCAGGCCAGTGCCGTGACTCA	TR:VR	45:3	10:0
chr8	13764448	r_444	A	<DEL>	.	PASS	END=141472578;SVTYPE=DEL;SVLEN=-127708130	TR:VR	30:5	41:0
chrX	156030382	i_1551	A	<INS>	.	Too_low_VAF	END=156030382;SVTYPE=INS;SVINSLEN=597;SVINSSEQ=GGTTAGGGTTAGGGTTAGGGGTTAGGGTTAGGGGGTTGGGGTTAGGGTTAGGGTTAGGGGGTTAGGGTTAGGGTTGGGGTTAGGGTTAGGGGTTAGGGTTTAGGGTTAGGGTTAGGGTTAGGTTAGGGTTGAGGCTGAGGCCAGGCCAGGTTAGGAGTTGAGGCTAGGCAGCCAGGGTTGGCCAGGTTGGGGTTGCCAGGTTGCCAGGTTGGGGTTGGGGTTGGGGTTGAGGGCCAGGCCAGGGGTTAGGGCCAGGCCAGGTTAGGGCCAGGGGCCAGGCCAGGGCCAGGTTGCCAGGGCCAGGGCCAGGGCCAGGCCAGGCAGGGGTTGGGGCCAGGGGCCAGGCCAGGCCAGGGCCAGGGCCAGGCCAGGCCAGGGCCAGGCCAGGGTTGAGGGTTGGGGCAGGGTTGAGGCTGAGGGCTGGGGTTGGGGTTGGGGTTGGCCAGGAGGTTGGGAGTTGGGTTTAGGGCCAGGGTTAGGGTTAGGGTTGGGGTTAGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTCTGGGAGTTGGGGGGTAGGGGTTGAGGTTAGGGTTGAGGTTAGGGTTAGGGTTGGGGTTGGGGTTGG	TR:VR	250:5	105:0
chr1	203288902	r_31_0	G	]chr8:9202253]G	.	PASS	SVTYPE=BND;MATEID=r_31_1	TR:VR	56:18	21:0
chr8	9202253	r_31_1	G	G[chr1:203288902[	.	PASS	SVTYPE=BND;MATEID=r_31_0	TR:VR	56:18	21:0
chr11	127132617	i_177	C	<INS>	.	PASS	END=127132617;SVTYPE=INS;SVINSLEN=64;SVINSSEQ=AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	31:4	19:0
chr16	11405055	r_107	G	<DUP>	.	PASS	END=11547639;SVTYPE=DUP;SVLEN=142584	TR:VR	77:12	19:0
chr2	111408845	r_197	G	<DUP>	.	Too_low_VAF	END=119286011;SVTYPE=DUP;SVLEN=7877166	TR:VR	206:5	20:0
chr2	14638821	r_182	G	<DUP>	.	PASS	END=15040006;SVTYPE=DUP;SVLEN=401185;SVINSLEN=9;SVINSSEQ=ATCCATCTT	TR:VR	64:13	25:0
chr22	49802695	i_1007	G	<INS>	.	PASS	END=49802695;SVTYPE=INS;SVINSLEN=143;SVINSSEQ=GGGGGCCGAGACCAATGCCTCCACTCTCTTCCTTTCCCCAACATCGCGGGGGCCGAGACCAATGCCTCCCTCTCTTCCCTTTCCCCAACATCGCGGGGGCCGAGACCAATGCCTCCACTGTCTTCCTTTCCCCAACATCGCAG	TR:VR	42:3	6:0
chr6	65351105	i_1291	T	<INS>	.	PASS	END=65351105;SVTYPE=INS;SVINSLEN=93;SVINSSEQ=TAACTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGATATTAAAGTCTTTATTTGCCCCCCCCCATTTTTATTTTCAGTAATACAGGGT	TR:VR	31:5	12:0
chr7	42809491	d_1474	A	<DEL>	.	PASS	END=42811362;SVTYPE=DEL;SVLEN=-1871	TR:VR	22:4	17:0
chr8	139623852	r_525	G	<DUP>	.	PASS	END=143057898;SVTYPE=DUP;SVLEN=3434046	TR:VR	36:14	29:0
chr1	203381574	r_32_0	A	A]chr8:143392823]	.	PASS	SVTYPE=BND;MATEID=r_32_1	TR:VR	72:18	22:0
chr8	143392823	r_32_1	C	C]chr1:203381574]	.	PASS	SVTYPE=BND;MATEID=r_32_0	TR:VR	72:18	22:0
chr17_KI270729v1_random	141136	d_793	C	<INS>	.	Too_small_size	END=141119;SVTYPE=INS;SVINSLEN=45;SVINSSEQ=CATTCTTGTCCATTCAGTGATGATTCCATTCGAATCCATTTGATG	TR:VR	28:3	15:0
chr2	111415370	r_198	G	<DEL>	.	Too_low_VAF	END=116547688;SVTYPE=DEL;SVLEN=-5132318	TR:VR	149:4	28:0
chr20	64287228	d_1080	T	<DEL>	.	Too_low_VAF	END=64287289;SVTYPE=DEL;SVLEN=-61;SVINSLEN=7;SVINSSEQ=AGGGTCA	TR:VR	183:4	85:1
chr3	129892174	i_1071	C	<INS>	.	PASS	END=129892174;SVTYPE=INS;SVINSLEN=82;SVINSSEQ=GTCTAAAATTTTCCTATGCTGCTGATCAGCAATCTATAAGCAGCTCAAAACTCTTCAGAAATTAAAAGGTTACCACCCACAG	TR:VR	44:17	18:0
chr1	36447125	i_16	T	<INS>	.	PASS	END=36447125;SVTYPE=INS;SVINSLEN=750;SVINSSEQ=TACCAAGTCTAGTGTTTTATGCAATGAATTCAGGCCTCAGCTGAAAGACTTGAAGGCTGGGTGCTGGAACTGTCTGAAGTTCACTCCACACCCAGCTCATTTGTGTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTACAGACAGGGTTTTGCCATGTTGCCCAGGCTGATCTCAAGTGATCTGCCCGCCTTGGCCTCCCAAAGTATCAGCATTACAGGCATGAGCCACCATTTAGAGAAATTAGGCTCCTGTTTAAACAAAATAATGACATTTGTAAATTGCTACTTGGTATGATACATTTTATAAAAGTAACAAGAACTCAAAGAAGCGGGAGATCAGTGCTGTTTGCAATGGTCAAGCAGTACTGAGAATGGGATTTGGGGAGCCTGGAATGCTTAAAATTATGGGTAGGAAAATGTATATAAGTCAGAAAAAAATAATTACAAAGTATATAAAAAGTCTAAGGTTGCCAAATATTTATGAATTGATGGTTGATCCATTAAAAAACTAGCACAGTACTTTCCTACATTTTTTGAGATTATATCTTGTCATCCCTCAGTACTGTTCCTTCTATGAAATACATACCTAATTCTAAATGTATCACAGACTAAATTATTGCACTGATTCTGCCATCAGTACTACTGTTGTACTGCACAGCCAAGATTTTAACTATCTCTGCAATCTAAATTCAAATAGTAGTTGGAGCATAAGGTAGTTCATCAGACAAAAGCTTGATTGTATCCAACT	TR:VR	53:13	14:0
chr11	132339038	i_179	T	<INS>	.	PASS	END=132339038;SVTYPE=INS;SVINSLEN=1758;SVINSSEQ=AACACTAAAATTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTAGATTTTATCTCATTTTATTGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTGTTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAATGCTTTTACACTGTTGGTGGGACTGTAAACTAGTTCA	TR:VR	27:3	9:0
chr2	111437102	r_199_0	G	[chr2:111466251[A	.	PASS	SVTYPE=BND;MATEID=r_199_1	TR:VR	80:4	26:0
chr2	111466251	r_199_1	A	[chr2:111437102[A	.	PASS	SVTYPE=BND;MATEID=r_199_0	TR:VR	80:4	26:0
chr2	118868075	d_992	A	<INS>	.	Too_low_VAF	END=118868104;SVTYPE=INS;SVINSLEN=30;SVINSSEQ=TAGTATATATATTATATATAATATATATAT	TR:VR	144:3	15:0
chr20	8240431	r_322	G	<DEL>	.	PASS	END=8604551;SVTYPE=DEL;SVLEN=-364120;SVINSLEN=3;SVINSSEQ=TGT	TR:VR	58:6	17:0
chr22	50029095	i_1008	A	<INS>	.	PASS	END=50029095;SVTYPE=INS;SVINSLEN=1689;SVINSSEQ=TCCTGAAGACCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCACACACACTCGTAAAGACCCCATCACACCATCCTGAAGACCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCACACACCCTCGTAAAGACCCCATCACACCATCCTGAAGACCCCACACACCCTCAAAGACCCCATCACACCGTCCTAAAGACCCCCACATACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCACACACCCTCGTAAAGACCCCCATCACGCTGTCCTAAAGACCCCCACATACCCTCGTAAAGACCCCCATCACACCATCCTAAAGACCCCACATACCCTCGTAAAGACCCCCATCACACCGTCCCAAAGACCCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCCACACACACTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCCACACACACTCGTAAAGACCCCATCACACCATCCTGAAGACCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCCACACACACTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCCACACACACTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCCACACACACTCGTAAAGACCCCATCACACCATCCTGAAGACCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCACACACCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCACACACACTCGTAAAGACCCCATCACACCATCCTGAAGACCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTAAAGACCCCACACACACTCGTAAAGACCCCATCACACCATCCTGAAGACCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCACACACACTCGTAAAGACCCCATCACACCATCCTGAAGACCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCACACACACTCGTGAAAGACCCCATCACACCATCCTGAAGACCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCACACACCCTCGTAAAGACCCCATCACACCGTCCTGAAGACCCCACACACCCTCGTAAAGACCCCATCACACCGT	TR:VR	55:3	12:0
chr8	140281189	r_526	T	<DEL>	.	PASS	END=142027760;SVTYPE=DEL;SVLEN=-1746571;SVINSLEN=1;SVINSSEQ=T	TR:VR	29:8	29:0
chr9	43195766	i_1418	A	<INS>	.	PASS	END=43195766;SVTYPE=INS;SVINSLEN=169;SVINSSEQ=TATTTGCATTTAATTCACAGAGTAGAAACTTCCTTTTCATAGATCACTTTTGATGCACTCCTTTAGTAGAATCTGAAGGGGATATTTGGACCGCTTTGAGGCATTCGATGGAAACGGGAATATCTTCACATAATCACTAGACAAGGGTTCTCTGAAACTTCTTTGTGCT	TR:VR	26:3	12:0
chr16	11716400	i_403	T	<INS>	.	PASS	END=11716400;SVTYPE=INS;SVINSLEN=682;SVINSSEQ=TGTATTTAGTAGAGATGGGGGTTTCACCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAAATGATCCGCCTGCCTCGGCCTCCCAAAGTGCTAGTATTACAGGCGTGAGCCATCTCGCCCAGCCTAGACACGGTTTTAAAAAGAGCAGACAGCTAAATTATATGAAACTAAACGACTGCCATTTACTCAGTCAGACTGTTGTTGTCAGCTGGGATTTGAGGCTTGGTGTGGTCACACCGTCTGATTTTCTTCTTATAAACACTGGAAATCTGGGTTTTACTCAAAATCTTCTGATTTTCAATGGTAGCAATTAATTTCCTTAAAAAATTTAAATGCTAAGCAGACCAAACAAAACCCATCTGCAGGCTGAATATGGCCCATGGCGCCGGCTCTGCAATCTCTGGTTTAAGAAACAGCAAACACCATCGGGAGCCACTTCTGCAGGTGTCTAAGGCTGTCATCCTGCCATTTGTTTCTCCCTAGAAGCTCCAATAACTGTACTACCTTATCCCCGGGGAGCCACACGCAGCCTCGTTTAACTAATGGTGAAGGGAGCCCCCAGAAAGGTGGGTCTCAATGCTCAACAGCTGCCTGGTTCACCCTCCTTCCCAGGGGCTGTTGTGTATCTTGCAAATAGAAATGGCCGGGCGTGGTGGTTCATGGCTGTAATCCCAGCAC	TR:VR	42:12	13:0
chr19	54596580	d_877	G	<DEL>	.	PASS	END=54596891;SVTYPE=DEL;SVLEN=-311	TR:VR	54:5	19:0
chr2	112036556	r_200_0	A	[chr2:114293120[A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_200_1	TR:VR	143:3	28:0
chr2	114293120	r_200_1	A	[chr2:112036556[A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_200_0	TR:VR	143:3	28:0
chr2	119001337	r_258_0	A	]chr9:28928809]G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_258_1	TR:VR	185:6	22:0
chr9	28928809	r_258_1	G	G[chr2:119001337[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_258_0	TR:VR	185:6	22:0
chr2	89795310	d_938	T	<DEL>	.	Too_small_size;Too_low_VAF	END=89795336;SVTYPE=DEL;SVLEN=-26	TR:VR	69:3	18:0
chr20	8326517	d_1020	T	<DEL>	.	PASS	END=8327836;SVTYPE=DEL;SVLEN=-1319	TR:VR	43:7	19:0
chr21	7228475	d_1084	T	<DEL>	.	Too_low_VAF	END=7228577;SVTYPE=DEL;SVLEN=-102	TR:VR	68:3	27:0
chr3	130681136	r_374_0	G	[chr3:131095151[T	.	PASS	SVTYPE=BND;MATEID=r_374_1	TR:VR	67:6	25:0
chr3	131095151	r_374_1	T	[chr3:130681136[T	.	PASS	SVTYPE=BND;MATEID=r_374_0	TR:VR	67:6	25:0
chr8	140287366	r_527_0	A	[chr8:142216702[C	.	PASS	SVTYPE=BND;MATEID=r_527_1	TR:VR	44:22	22:0
chr8	142216702	r_527_1	C	[chr8:140287366[C	.	PASS	SVTYPE=BND;MATEID=r_527_0	TR:VR	44:22	22:0
chr8	88157885	r_514	T	<DEL>	.	Too_low_VAF	END=88372286;SVTYPE=DEL;SVLEN=-214401	TR:VR	87:4	32:0
chr10	38930838	r_37_0	T	[chr22_KI270735v1_random:30997[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_37_1	TR:VR	184:4	82:0
chr22_KI270735v1_random	30997	r_37_1	T	[chr10:38930838[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_37_0	TR:VR	184:4	82:0
chr19	54644728	i_646	G	<INS>	.	PASS	END=54644728;SVTYPE=INS;SVINSLEN=131;SVINSSEQ=GGTATTGTTCAGTGGGATTTGAGAGGATGCCTTAGATTAGAGGGTATTGTTCAGTGGGATTTGGAGAGGATGCCTTTAGGTGATTAGAGGATATTGTTCAGTGGGATTTGGAGGATGCCTTAGATTAGAAG	TR:VR	45:5	12:0
chr2	112134395	r_201	A	<DUP>	.	PASS	END=115423866;SVTYPE=DUP;SVLEN=3289471	TR:VR	132:11	29:0
chr2	119016830	r_259	A	<DEL>	.	Too_low_VAF	END=120881976;SVTYPE=DEL;SVLEN=-1865146	TR:VR	300:3	24:0
chr3	130700098	r_375	T	<DEL>	.	PASS	END=130953263;SVTYPE=DEL;SVLEN=-253165	TR:VR	90:6	28:0
chr8	14030012	r_445	C	<DUP>	.	PASS	END=76975369;SVTYPE=DUP;SVLEN=62945357;SVINSLEN=3;SVINSSEQ=AAA	TR:VR	64:10	23:0
chr2	112212245	r_202_0	C	C]chr2:115315475]	.	PASS	SVTYPE=BND;MATEID=r_202_1	TR:VR	150:12	23:0
chr2	115315475	r_202_1	T	T]chr2:112212245]	.	PASS	SVTYPE=BND;MATEID=r_202_0	TR:VR	150:12	23:0
chr2	119030367	r_260_0	A	]chr9:22298978]CATTATTT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_260_1;SVINSLEN=7;SVINSSEQ=CATTATT	TR:VR	164:4	25:0
chr9	22298978	r_260_1	T	TAATAATG[chr2:119030367[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_260_0;SVINSLEN=7;SVINSSEQ=AATAATG	TR:VR	164:4	25:0
chr21	7957281	d_1104	C	<DEL>	.	Too_small_size;Too_low_VAF	END=7957321;SVTYPE=DEL;SVLEN=-40	TR:VR	461:3	205:1
chr3	130726323	r_376_0	G	[chr3:131079849[T	.	PASS	SVTYPE=BND;MATEID=r_376_1	TR:VR	73:9	18:0
chr3	131079849	r_376_1	T	[chr3:130726323[T	.	PASS	SVTYPE=BND;MATEID=r_376_0	TR:VR	73:9	18:0
chr5	17033780	d_1360	A	<DEL>	.	PASS	END=17033857;SVTYPE=DEL;SVLEN=-77	TR:VR	30:5	14:0
chr6	72943911	r_417	C	<DEL>	.	PASS	END=72971597;SVTYPE=DEL;SVLEN=-27686	TR:VR	45:8	35:0
chr8	94924156	d_1533	G	<DEL>	.	PASS	END=94924242;SVTYPE=DEL;SVLEN=-86	TR:VR	49:5	15:0
chr2	112514236	r_203_0	G	G]chr2:115815451]	.	PASS	SVTYPE=BND;MATEID=r_203_1	TR:VR	148:12	24:0
chr2	115815451	r_203_1	G	G]chr2:112514236]	.	PASS	SVTYPE=BND;MATEID=r_203_0	TR:VR	148:12	24:0
chr2	119064759	r_261_0	G	]chr4:61808838]A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_261_1	TR:VR	179:8	22:0
chr4	61808838	r_261_1	A	A[chr2:119064759[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_261_0	TR:VR	179:8	22:0
chr3	131078248	r_377_0	C	C]chr3:131081809]	.	PASS	SVTYPE=BND;MATEID=r_377_1	TR:VR	38:9	20:0
chr3	131081809	r_377_1	G	G]chr3:131078248]	.	PASS	SVTYPE=BND;MATEID=r_377_0	TR:VR	38:9	20:0
chr3	95972587	d_1230	G	<DEL>	.	PASS	END=95973855;SVTYPE=DEL;SVLEN=-1268;SVINSLEN=70;SVINSSEQ=TTTCTATTGTTTATTAATTAACAAATAATTAACCATCAGATCTTGTGAGACTTATTCGCTATCATAAGAA	TR:VR	43:10	16:0
chrUn_KI270467v1	3620	d_1657	A	<INS>	.	Too_low_VAF	END=3687;SVTYPE=INS;SVINSLEN=67;SVINSSEQ=GAATATATATTTGGTGTACTTTGATATTTTATGTACAGAATATAATATATATTTGATGTACGTTCAT	TR:VR	623:3	666:1
chr1	41234276	d_23	T	<DEL>	.	PASS	END=41234624;SVTYPE=DEL;SVLEN=-348;SVINSLEN=160;SVINSSEQ=TTGAGACGGAGTCTCACCGTGAAACCCTGTATCTGCAAAAAAGATTCAGTTCAAAAGTCATTCTCTCTCTCTGGAACCTTTCCAAATGTCACTTCCCTCCTTCTGCCTTGGCCATCAGTTGTTCCTGCCCTAGTGTTCCCATAGTACTTTGAATATGTTT	TR:VR	31:5	15:0
chr2	119069496	r_262_0	G	G[chr9:34174333[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_262_1	TR:VR	171:8	32:0
chr9	34174333	r_262_1	C	]chr2:119069496]C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_262_0	TR:VR	171:8	32:0
chr3	131080162	d_1233	C	<DEL>	.	PASS	END=131080393;SVTYPE=DEL;SVLEN=-231	TR:VR	35:9	14:0
chr8	45461256	r_475	T	<DEL>	.	PASS	END=46613259;SVTYPE=DEL;SVLEN=-1152003	TR:VR	105:18	23:0
chr9	10373	d_1547	C	<DEL>	.	PASS	END=10418;SVTYPE=DEL;SVLEN=-45;SVINSLEN=14;SVINSSEQ=TACCCCTGGCCTGG	TR:VR	45:9	14:0
chr1	218119674	d_142	A	<DEL>	.	PASS	END=218119731;SVTYPE=DEL;SVLEN=-57	TR:VR	33:5	7:0
chr2	119086177	r_263_0	C	[chr9:21132887[C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_263_1	TR:VR	196:9	30:0
chr9	21132887	r_263_1	C	[chr2:119086177[C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_263_0	TR:VR	196:9	30:0
chr22	18418674	i_967	T	<INS>	.	Too_low_VAF	END=18418675;SVTYPE=INS;SVINSLEN=565;SVINSSEQ=TATGTATTACATATAACATACTATATATTATGTATTATATATAACATACTATATATTATATATTATATATATTAATATATTAAAAATATGTAATAAATATGTAATTATAAATATGATTATAATATAAACTAAAATATAATACAAATTATATTTATTTTTATATTATATTTTATATCATACATTATATATAATAAAAATATATATAAGTATTATATATTTTAAATATAAATATATTATATATATTATGTTAAATTCATTATATATATTAAAAATATTATATATTTATAATATATATTTATATATTATGTATCTGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	TR:VR	362:3	218:1
chr4_GL000008v2_random	7576	d_1334	G	<DEL>	.	Too_small_size;Too_low_VAF	END=7606;SVTYPE=DEL;SVLEN=-30	TR:VR	523:3	271:1
chr9	105629982	r_542_0	G	G]chr9:105634200]	.	PASS	SVTYPE=BND;MATEID=r_542_1	TR:VR	27:7	15:0
chr9	105634200	r_542_1	T	T]chr9:105629982]	.	PASS	SVTYPE=BND;MATEID=r_542_0	TR:VR	27:7	15:0
chr9	63797664	r_540_0	T	]chrUn_KI270435v1:32879]A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_540_1	TR:VR	153:3	60:0
chrUn_KI270435v1	32879	r_540_1	A	A[chr9:63797664[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_540_0	TR:VR	153:3	60:0
chrY	56841313	i_1592	C	<INS>	.	PASS	END=56841313;SVTYPE=INS;SVINSLEN=614;SVINSSEQ=CGCAGGGAGGGGGCATTGTGACATATTTCTGAACTGATCATCCAGGAGATGTAACTATTCTCCAGGCTTTGACTAAAGAGCGTCGGAAGGTGTTGGGAGAGCCTCAGCCGGAATTTCATGGATGGACAAGGGCACAGAGAGGCCAGCGGGCTCCCTTGCACGTCAGCCGGGGTGCGCAATGAGCGCAGGTCTAGCCAGGAGGCATGGCAAAGAGAGCTAGAGGTCTGCGTTCTGCCGCCAGGCGCTCCATGGTGGCAGCTGGGAGGCTGCAGGGGCACGGGCGGGCCGGTGACGGTAGCGCGGAGGCGCAGAGGAGGCGAGCCGCTGGGGCGGTGTCAGGCCTGGACGCTGGGTGGGCCGGTGTTTCGCGGGACGTGGGTCTCCACCCAGCCCAAGGGAGGATGCATTTTCCGGGGGTGGGAGCTGGGGATGGGGAGGGGGTGGTCAGGCCGGGGTGGGGTGGTGGAAAGGCATGAGAGCTCTGTGGGGGCTGCTCCCAAAGCACAGGTGGCTGCCCGCAAACCCGCTTGTGTGCAGTAGGCGGCCCACCTGCTGGTACCTGGGCCAGCTCTGGGATCCCCGGGATGCCCAGGAAAGAATTGCTGCTCCCCGCT	TR:VR	201:11	47:1
chr12	32393752	r_57_0	T	[chr12:32620942[C	.	PASS	SVTYPE=BND;MATEID=r_57_1	TR:VR	50:5	23:0
chr12	32620942	r_57_1	C	[chr12:32393752[C	.	PASS	SVTYPE=BND;MATEID=r_57_0	TR:VR	50:5	23:0
chr14_GL000225v1_random	126347	d_587	C	<DEL>	.	Too_low_VAF	END=126743;SVTYPE=DEL;SVLEN=-396;SVINSLEN=30;SVINSSEQ=ATTTGTCTAGGCTCTGCCTACAGGGCATTG	TR:VR	854:6	737:0
chr16	70101328	r_119	G	<DUP>	.	PASS	END=70249005;SVTYPE=DUP;SVLEN=147677;SVINSLEN=1;SVINSSEQ=T	TR:VR	68:6	34:0
chr2	119093872	r_264	G	<DUP>	.	Too_low_VAF	END=121701867;SVTYPE=DUP;SVLEN=2607995	TR:VR	326:6	22:0
chr9	105630013	r_543_0	G	[chr9:105653257[C	.	PASS	SVTYPE=BND;MATEID=r_543_1	TR:VR	33:6	21:0
chr9	105653257	r_543_1	C	[chr9:105630013[C	.	PASS	SVTYPE=BND;MATEID=r_543_0	TR:VR	33:6	21:0
chrX	1588506	d_1690	C	<INS>	.	Too_small_size;Too_low_VAF	END=1588471;SVTYPE=INS;SVINSLEN=21;SVINSSEQ=CTCTCCTCCCCTTCCCCTCCC	TR:VR	244:4	105:1
chr1	21949341	r_4_0	T	]chr5:36535009]A	.	PASS	SVTYPE=BND;MATEID=r_4_1	TR:VR	76:7	19:0
chr5	36535009	r_4_1	A	A[chr1:21949341[	.	PASS	SVTYPE=BND;MATEID=r_4_0	TR:VR	76:7	19:0
chr11	77595751	d_211	G	<DEL>	.	PASS	END=77596270;SVTYPE=DEL;SVLEN=-519	TR:VR	31:11	14:0
chr12	33058067	r_58	G	<DEL>	.	PASS	END=33183328;SVTYPE=DEL;SVLEN=-125261;SVINSLEN=2;SVINSSEQ=TG	TR:VR	72:7	17:0
chr16	18364890	d_614	G	<DEL>	.	PASS	END=18365528;SVTYPE=DEL;SVLEN=-638	TR:VR	24:4	12:0
chr16	70204828	r_120	A	<DUP>	.	PASS	END=70282888;SVTYPE=DUP;SVLEN=78060;SVINSLEN=220;SVINSSEQ=TCAAAGCACCTCTGCCCGGCCACCCCTACTGGGAAGTGAGGAGCCCCTCAGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCTCCACCCGGCCAGCTGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCTGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCA	TR:VR	99:12	30:0
chr17	30753614	r_130	C	<DUP>	.	PASS	END=30975723;SVTYPE=DUP;SVLEN=222109	TR:VR	74:9	17:0
chr17_GL000205v2_random	11334	i_486	G	<INS>	.	Too_low_VAF	END=11335;SVTYPE=INS;SVINSLEN=98;SVINSSEQ=GACAAACATTCGGACCCCAGATGTAGTGTTTTCGAATACTATGTGTAGGACAAACATTCAAACAACGGCGGGAGAATTATGGAATTCTATGTTTCGGA	TR:VR	160:3	75:1
chr2	113575608	r_204_0	A	[chr2:113576286[T	.	PASS	SVTYPE=BND;MATEID=r_204_1	TR:VR	40:9	23:0
chr2	113576286	r_204_1	T	[chr2:113575608[T	.	PASS	SVTYPE=BND;MATEID=r_204_0	TR:VR	40:9	23:0
chr2	119094295	r_265	A	<DEL>	.	Too_low_VAF	END=121701828;SVTYPE=DEL;SVLEN=-2607533	TR:VR	326:9	23:0
chrUn_KI270538v1	80878	d_1661	T	<DEL>	.	Too_low_VAF	END=81193;SVTYPE=DEL;SVLEN=-315;SVINSLEN=140;SVINSSEQ=TTGTATGTGAAGATATTTCCTTATCCATCATAGGCCTCAAATCGCTCCAAATATCCACTTGCAGATACTACAAAAGGACTGTTTCAACACTGCTCTCTCAAATGGAAGGTTCAACTCTGTGAGTTGAATGCACACATCAC	TR:VR	120:5	79:1
chrY	56843821	i_1593	G	<INS>	.	Too_low_VAF	END=56843821;SVTYPE=INS;SVINSLEN=260;SVINSSEQ=TCTAGGCACTGCCTACTACAGGGGACGTGGTACATATCTGCACTGATCACCCAGGTGATAGACTCTTGTCATATATCTGCCTACTTGACACTTGTGACACATCCTGAACTCCACTCAAGAGTGACAAACTCACTGTCTAGGCTCTGCCTACATGGGCTTTGTGACACATCTCTTCACACAGTCACTCCTGGGGAGGAACTCTTGTCTACGCTCTGCCACAAGGGCTTTGTTATACTGTGACTTCAAAAGCTGATATAGTC	TR:VR	227:6	49:0
chr11	81614028	r_50_0	A	ACTTATTGAGGGCTGTGAGCCAAGATTCGGAAC]chr3:112166388]	.	PASS	SVTYPE=BND;MATEID=r_50_1;SVINSLEN=32;SVINSSEQ=CTTATTGAGGGCTGTGAGCCAAGATTCGGAAC	TR:VR	57:7	23:0
chr3	112166388	r_50_1	T	TGTTCCGAATCTTGGCTCACAGCCCTCAATAAG]chr11:81614028]	.	PASS	SVTYPE=BND;MATEID=r_50_0;SVINSLEN=32;SVINSSEQ=GTTCCGAATCTTGGCTCACAGCCCTCAATAAG	TR:VR	57:7	23:0
chr12	33205703	r_59_0	T	TG]chr8:43653119]	.	PASS	SVTYPE=BND;MATEID=r_59_1;SVINSLEN=1;SVINSSEQ=G	TR:VR	93:6	21:0
chr8	43653119	r_59_1	G	GC]chr12:33205703]	.	PASS	SVTYPE=BND;MATEID=r_59_0;SVINSLEN=1;SVINSSEQ=C	TR:VR	93:6	21:0
chr17	31465195	r_131	T	<DUP>	.	PASS	END=31477325;SVTYPE=DUP;SVLEN=12130	TR:VR	50:4	22:0
chr19	54737197	d_880	A	<DEL>	.	PASS	END=54737520;SVTYPE=DEL;SVLEN=-323;SVINSLEN=3;SVINSSEQ=GCG	TR:VR	59:5	8:0
chr2	119146160	r_266_0	A	A]chr2:121049485]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_266_1	TR:VR	354:3	24:0
chr2	121049485	r_266_1	C	C]chr2:119146160]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_266_0	TR:VR	354:3	24:0
chr11	84126717	r_51	T	<DUP>	.	PASS	END=84143122;SVTYPE=DUP;SVLEN=16405	TR:VR	36:6	21:0
chr16	76292277	i_431	C	<INS>	.	PASS	END=76292277;SVTYPE=INS;SVINSLEN=782;SVINSSEQ=AAGAATTTATGGCACTTCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAATAACAATAAAATGAGATAAAATCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	33:7	16:0
chr19	54738094	i_651	C	<INS>	.	PASS	END=54738094;SVTYPE=INS;SVINSLEN=406;SVINSSEQ=AGCCTCTTGAGTAGATGGCATTACAGGTGTCTGCCACCAGGCACGGCTAATTTTTGAATGTTTAGCAGAGACACGGTTTCACTATGTTGGCCAGGCTGCTCTCAAACTCCTCATCTCAGTTGATTCGCCCACCTCGGCTTCCAAACATGCTGGGGGAAACTTGATTTTCTATAGCATTATGTTACTGGATATTTCCGTAAAATTTAAAATGAGGGAGGGACAGAGACAGAGAGGGAGCAAACTCCAGAGTTGGGACTCTGGAATCTTGGGTCATGAGACAAATTATAGATAAAACTATAAAAATCCAGAATTTACATGTGTGGTTTTTGCTGATAAAGTACAATTCGAAGATTGTAAATAATTGCATAATCCTTTCCTGGGAATTTAAATCATTTTAACTGGTTTT	TR:VR	60:7	9:0
chr2	113665423	r_205_0	G	G]chr2:116523138]	.	PASS	SVTYPE=BND;MATEID=r_205_1	TR:VR	169:13	28:0
chr2	116523138	r_205_1	C	C]chr2:113665423]	.	PASS	SVTYPE=BND;MATEID=r_205_0	TR:VR	169:13	28:0
chr2	119146375	r_267_0	C	[chr9:32383582[C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_267_1	TR:VR	197:8	29:0
chr9	32383582	r_267_1	C	[chr2:119146375[C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_267_0	TR:VR	197:8	29:0
chr6	157607417	r_421	C	<DUP>	.	PASS	END=157795356;SVTYPE=DUP;SVLEN=187939	TR:VR	49:8	26:0
chr7	104944283	r_431	T	<DUP>	.	PASS	END=104948640;SVTYPE=DUP;SVLEN=4357	TR:VR	48:12	15:0
chrX	23662437	r_552	G	<DUP>	.	PASS	END=23923421;SVTYPE=DUP;SVLEN=260984	TR:VR	74:7	18:0
chr1	230304872	r_33	T	<DUP>	.	PASS	END=230315889;SVTYPE=DUP;SVLEN=11017	TR:VR	44:5	19:0
chr18	7931933	r_156	A	<DEL>	.	PASS	END=8209385;SVTYPE=DEL;SVLEN=-277452	TR:VR	54:6	30:0
chr19	54738664	i_652	T	<INS>	.	Too_small_size	END=54738664;SVTYPE=INS;SVINSLEN=39;SVINSSEQ=TATGGGCCTGGAGTGGAGATCTGGGCCTGGAGGGGATAT	TR:VR	58:7	9:0
chr2	113675437	r_206	A	<DUP>	.	PASS	END=116496733;SVTYPE=DUP;SVLEN=2821296	TR:VR	159:12	31:0
chr20	15261565	r_323	T	<DEL>	.	PASS	END=15313718;SVTYPE=DEL;SVLEN=-52153	TR:VR	65:8	26:0
chr21	7968045	d_1108	T	<INS>	.	Too_low_VAF	END=7968159;SVTYPE=INS;SVINSLEN=115;SVINSSEQ=CACAGACGTAAAAATTTGTTTTGATTGATCAGTTTGGAAACAGTCTTTTTGTAGAGTCTGCAAATGGATGTTTGGATTGCTTTGAGGCCTATGTTGAGAAAGGTAATATGTTCAC	TR:VR	269:13	113:1
chr7	105409048	r_432_0	T	T[chr8:143321938[	.	PASS	SVTYPE=BND;MATEID=r_432_1	TR:VR	58:15	19:0
chr8	143321938	r_432_1	A	]chr7:105409048]A	.	PASS	SVTYPE=BND;MATEID=r_432_0	TR:VR	58:15	19:0
chr16	78468557	d_718	T	<DEL>	.	PASS	END=78472934;SVTYPE=DEL;SVLEN=-4377	TR:VR	44:10	21:0
chr17	37462306	r_132_0	G	[chr20:50522325[C	.	PASS	SVTYPE=BND;MATEID=r_132_1	TR:VR	100:13	30:0
chr20	50522325	r_132_1	C	[chr17:37462306[C	.	PASS	SVTYPE=BND;MATEID=r_132_0	TR:VR	100:13	30:0
chr19	54738755	i_653	G	<INS>	.	PASS	END=54738755;SVTYPE=INS;SVINSLEN=249;SVINSSEQ=TGGAGAGAGGAACCTGGAGAAGAGATAGGAACCTGGATGGGAGGTAGGAGCCTAGGGTGGAGATATGGGACTGGAGTGGAGATATGGGACTGGAGTAGAGATATGGGCCTGGAGTGGAGTTATGGGCCTGGAGTGAAGTTATGGGCCTGGAGGTGGAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAGGTGCAGATATGGACCTGGAGTGGAGATATGGCCCTGGAGTGGAGATGTGGGTCTGGAG	TR:VR	58:9	9:0
chr2	113689664	r_207_0	A	A]chr2:116535377]	.	PASS	SVTYPE=BND;MATEID=r_207_1	TR:VR	184:10	23:0
chr2	116535377	r_207_1	A	A]chr2:113689664]	.	PASS	SVTYPE=BND;MATEID=r_207_0	TR:VR	184:10	23:0
chr2	119289579	d_994	G	<DEL>	.	Too_low_VAF	END=119290723;SVTYPE=DEL;SVLEN=-1144	TR:VR	162:7	10:0
chr20	33055576	r_327	G	<DUP>	.	PASS	END=50794264;SVTYPE=DUP;SVLEN=17738688	TR:VR	95:16	16:0
chr11	135040963	d_233	T	<DEL>	.	PASS	END=135041040;SVTYPE=DEL;SVLEN=-77	TR:VR	36:7	20:0
chr17	37653460	r_133_0	C	]chr2:236131576]G	.	PASS	SVTYPE=BND;MATEID=r_133_1	TR:VR	67:5	27:0
chr2	236131576	r_133_1	G	G[chr17:37653460[	.	PASS	SVTYPE=BND;MATEID=r_133_0	TR:VR	67:5	27:0
chr18	79534965	i_560	G	<INS>	.	PASS	END=79534965;SVTYPE=INS;SVINSLEN=186;SVINSSEQ=CAGTCGATGTCCTTTAGAATGTGTTTATGTCTTTGGTAGTCGATGTCCTTTAGAATGTGTTTATGTCTTTGGTCGATCGATGTCCTTTAGAATGTGTTTATGTCTTTGGTATTGGTCGATGTCCTTTAGAATGTGTTTATGTCTTTGGTAGTCGATGTCCTTTAGAATGTGTTTATGTCTTTTGAT	TR:VR	30:3	9:0
chr2	113854471	r_208_0	A	]chrX:77332723]C	.	PASS	SVTYPE=BND;MATEID=r_208_1	TR:VR	84:5	28:0
chrX	77332723	r_208_1	C	C[chr2:113854471[	.	PASS	SVTYPE=BND;MATEID=r_208_0	TR:VR	84:5	28:0
chr2	119469856	r_268_0	T	T[chr4:136733231[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_268_1	TR:VR	196:6	24:0
chr4	136733231	r_268_1	C	]chr2:119469856]C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_268_0	TR:VR	196:6	24:0
chr21	7291071	d_1090	T	<INS>	.	PASS	END=7291160;SVTYPE=INS;SVINSLEN=277;SVINSSEQ=GAAACTTTCTTTTGATTGAGGAGTTTTGAAACACTGTTTTGTAGAATCTGCAAGAGGATGTTTGGAGGGCTTTGAGGCCTATTGTGGAAAAGGAAATAATTTCACATAAAAACTACTCTGAAACATTCTGAGAAACTAATCATTCTGAGAAGCTAATTTGTGATGAGTGCATTCATCACATAGATTTGAACTTTTCTTTTGATTGAGCAGTTTTGAAACACTCTTTCTGTAGAATCTGCAAGTGGATATTTAGAGGGATTTTAGGCCTATTTTGGAA	TR:VR	113:10	49:1
chr4	133957839	r_390_0	C	[chr4:171206324[C	.	PASS	SVTYPE=BND;MATEID=r_390_1	TR:VR	47:9	27:0
chr4	171206324	r_390_1	C	[chr4:133957839[C	.	PASS	SVTYPE=BND;MATEID=r_390_0	TR:VR	47:9	27:0
chr7	1128625	d_1467	T	<INS>	.	PASS	END=1128752;SVTYPE=INS;SVINSLEN=309;SVINSSEQ=CTCGGCTCATCCCACCGTCACCCGGGCTGGAGTGCAGTGGCGCCATCTCGGCTCATCTCACCGTCACCCGGGCTGGAGTGCAGTGGCACAATCTCGGCTCATCCCACCGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCATCCCACCGTCACCCGGGCTGGAGTGCAGTGGCACGATCTCGGCTCATCCCACCGTCACCCGGGCTGGAGTGCAGTGGCACCATCTCGGCTCATCCCACCGTCACCCGGGCTGGAGTGCAGTGGCACGATCTCGGCTCATCCCACCGTCACCCGGGCTGGAGT	TR:VR	32:10	8:0
chr9	127569110	r_544	C	<DUP>	.	PASS	END=127577541;SVTYPE=DUP;SVLEN=8431	TR:VR	26:3	14:0
chr9	89651763	r_541	G	<DEL>	.	PASS	END=132694576;SVTYPE=DEL;SVLEN=-43042813	TR:VR	54:3	28:0
chr11	95442261	r_52_0	A	A[chr3:181475043[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_52_1	TR:VR	72:3	38:1
chr3	181475043	r_52_1	A	]chr11:95442261]A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_52_0	TR:VR	72:3	38:1
chr16	27244063	r_111_0	T	[chr16:27244962[A	.	PASS	SVTYPE=BND;MATEID=r_111_1	TR:VR	46:30	13:0
chr16	27244962	r_111_1	A	[chr16:27244063[A	.	PASS	SVTYPE=BND;MATEID=r_111_0	TR:VR	46:30	13:0
chr17	37687964	r_134_0	C	[chr17:42265576[C	.	PASS	SVTYPE=BND;MATEID=r_134_1	TR:VR	107:6	30:0
chr17	42265576	r_134_1	C	[chr17:37687964[C	.	PASS	SVTYPE=BND;MATEID=r_134_0	TR:VR	107:6	30:0
chr2	113999882	r_209	T	<DUP>	.	Too_low_VAF	END=119671431;SVTYPE=DUP;SVLEN=5671549	TR:VR	257:8	23:0
chr2	119469885	r_269_0	C	]chr4:156227143]AA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_269_1;SVINSLEN=1;SVINSSEQ=A	TR:VR	193:9	25:0
chr4	156227143	r_269_1	A	AT[chr2:119469885[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_269_0;SVINSLEN=1;SVINSSEQ=T	TR:VR	193:9	25:0
chr20	35241945	r_328_0	A	[chr9:125163116[A	.	PASS	SVTYPE=BND;MATEID=r_328_1	TR:VR	61:4	20:0
chr9	125163116	r_328_1	A	[chr20:35241945[A	.	PASS	SVTYPE=BND;MATEID=r_328_0	TR:VR	61:4	20:0
chr4	133973582	r_391_0	T	T]chr4:156240748]	.	PASS	SVTYPE=BND;MATEID=r_391_1	TR:VR	48:10	32:0
chr4	156240748	r_391_1	C	C]chr4:133973582]	.	PASS	SVTYPE=BND;MATEID=r_391_0	TR:VR	48:10	32:0
chr8	46637089	r_476	A	<DEL>	.	PASS	END=142474808;SVTYPE=DEL;SVLEN=-95837719	TR:VR	121:41	22:0
chr1	73343620	d_25	A	<DEL>	.	PASS	END=73344773;SVTYPE=DEL;SVLEN=-1153	TR:VR	37:12	14:0
chr16	27244387	r_112	C	<DEL>	.	PASS	END=27247932;SVTYPE=DEL;SVLEN=-3545;SVINSLEN=17;SVINSSEQ=CACAAAAAACATTCCAC	TR:VR	49:29	15:0
chr17	37776620	d_746	A	<DEL>	.	PASS	END=37776936;SVTYPE=DEL;SVLEN=-316	TR:VR	62:12	9:0
chr2	114008699	r_210	C	<DUP>	.	Too_low_VAF	END=119840777;SVTYPE=DUP;SVLEN=5832078	TR:VR	258:7	26:0
chr2	119475941	r_270_0	C	C]chr9:31902735]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_270_1	TR:VR	194:7	22:0
chr9	31902735	r_270_1	A	A]chr2:119475941]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_270_0	TR:VR	194:7	22:0
chr20	35630815	r_329_0	T	T]chr20:62519389]	.	PASS	SVTYPE=BND;MATEID=r_329_1	TR:VR	80:11	21:0
chr20	62519389	r_329_1	T	T]chr20:35630815]	.	PASS	SVTYPE=BND;MATEID=r_329_0	TR:VR	80:11	21:0
chr3	141441854	d_1242	T	<DEL>	.	PASS	END=141441997;SVTYPE=DEL;SVLEN=-143	TR:VR	30:7	9:0
chr4	135662015	r_392	T	<DUP>	.	PASS	END=173913952;SVTYPE=DUP;SVLEN=38251937	TR:VR	49:11	21:0
chr5	107424439	r_405	A	<DEL>	.	PASS	END=107493983;SVTYPE=DEL;SVLEN=-69544	TR:VR	67:4	26:0
chr8	46642290	r_477	G	<DUP>	.	PASS	END=81962874;SVTYPE=DUP;SVLEN=35320584	TR:VR	119:30	23:0
chr12	100241918	d_264	C	<DEL>	.	PASS	END=100246898;SVTYPE=DEL;SVLEN=-4980	TR:VR	38:6	21:0
chr17	37811532	r_135	T	<DEL>	.	PASS	END=42527937;SVTYPE=DEL;SVLEN=-4716405	TR:VR	110:9	32:0
chr17_GL000205v2_random	14713	i_492	C	<DEL>	.	Too_small_size;Too_low_VAF	END=14762;SVTYPE=DEL;SVLEN=-49	TR:VR	159:3	67:0
chr2	114028706	r_211	G	<DEL>	.	Too_low_VAF	END=117263099;SVTYPE=DEL;SVLEN=-3234393	TR:VR	170:8	33:0
chr2	119512122	r_271_0	T	[chr9:21492174[A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_271_1	TR:VR	202:10	24:0
chr9	21492174	r_271_1	A	[chr2:119512122[A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_271_0	TR:VR	202:10	24:0
chr22_KI270736v1_random	154019	r_349_0	A	[chrY:56837852[CACAAAGCACCCTGTGGTCAGATCCTAGAGAATAGTTATAGTGAGGCAGATGGAGTGGAAAGGAATGGAGTGGATTGGAATAAAATGGAGTCGATTGGAGCAGAGTGGACTGGAAGGGAATACA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_349_1;SVINSLEN=123;SVINSSEQ=CACAAAGCACCCTGTGGTCAGATCCTAGAGAATAGTTATAGTGAGGCAGATGGAGTGGAAAGGAATGGAGTGGATTGGAATAAAATGGAGTCGATTGGAGCAGAGTGGACTGGAAGGGAATAC	TR:VR	927:6	487:1
chrY	56837852	r_349_1	A	[chr22_KI270736v1_random:154019[GTATTCCCTTCCAGTCCACTCTGCTCCAATCGACTCCATTTTATTCCAATCCACTCCATTCCTTTCCACTCCATCTGCCTCACTATAACTATTCTCTAGGATCTGACCACAGGGTGCTTTGTGA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_349_0;SVINSLEN=123;SVINSSEQ=GTATTCCCTTCCAGTCCACTCTGCTCCAATCGACTCCATTTTATTCCAATCCACTCCATTCCTTTCCACTCCATCTGCCTCACTATAACTATTCTCTAGGATCTGACCACAGGGTGCTTTGTG	TR:VR	927:6	487:1
chr3	14158715	r_350	T	<DUP>	.	PASS	END=14440672;SVTYPE=DUP;SVLEN=281957	TR:VR	70:7	26:0
chr4	136563410	r_393	C	<DUP>	.	PASS	END=136610509;SVTYPE=DUP;SVLEN=47099	TR:VR	40:7	30:0
chr5	179411906	d_1424	G	<DEL>	.	PASS	END=179412046;SVTYPE=DEL;SVLEN=-140	TR:VR	52:7	14:0
chr2	114038795	r_212_0	G	[chr2:114039164[T	.	PASS	SVTYPE=BND;MATEID=r_212_1	TR:VR	100:24	21:0
chr2	114039164	r_212_1	T	[chr2:114038795[T	.	PASS	SVTYPE=BND;MATEID=r_212_0	TR:VR	100:24	21:0
chr2	119517027	r_272_0	A	A[chr4:130712187[	.	PASS	SVTYPE=BND;MATEID=r_272_1	TR:VR	195:11	28:0
chr4	130712187	r_272_1	G	]chr2:119517027]G	.	PASS	SVTYPE=BND;MATEID=r_272_0	TR:VR	195:11	28:0
chr3	14218580	r_352	T	<DUP>	.	PASS	END=14234964;SVTYPE=DUP;SVLEN=16384	TR:VR	78:15	25:0
chr4	136676413	r_394	G	<DUP>	.	PASS	END=171210326;SVTYPE=DUP;SVLEN=34533913	TR:VR	41:7	22:0
chr8	48800682	r_479	G	<DEL>	.	PASS	END=65185001;SVTYPE=DEL;SVLEN=-16384319	TR:VR	109:13	38:0
chr16	27294930	i_407	A	<INS>	.	PASS	END=27294930;SVTYPE=INS;SVINSLEN=309;SVINSSEQ=TATAAAATATATATTAAATATATATTATATATTATATATAAAATATATATTAAATATATATTATATATTATATATAAAATATATATTAAATATATATTATATATTATATATAGTATATTATACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC	TR:VR	73:7	15:0
chr19	54834531	d_884	A	<DEL>	.	PASS	END=54834604;SVTYPE=DEL;SVLEN=-73;SVINSLEN=53;SVINSSEQ=GGAACCCGGAGGTCTAGATAGAGCCTGGAGAGAAGATATTGGCCTGGGATGGA	TR:VR	47:3	23:0
chr2	114039154	r_213_0	G	G]chr2:122038294]	.	PASS	SVTYPE=BND;MATEID=r_213_1	TR:VR	230:24	35:0
chr2	122038294	r_213_1	A	A]chr2:114039154]	.	PASS	SVTYPE=BND;MATEID=r_213_0	TR:VR	230:24	35:0
chr2	119521805	r_273_0	A	A[chr9:28928069[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_273_1	TR:VR	173:7	27:0
chr9	28928069	r_273_1	G	]chr2:119521805]G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_273_0	TR:VR	173:7	27:0
chr4	136733127	r_395	A	<DEL>	.	PASS	END=173931950;SVTYPE=DEL;SVLEN=-37198823	TR:VR	49:7	32:0
chr13	63028414	r_75_0	A	[chrUn_KI270442v1:38294[G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_75_1	TR:VR	123:4	53:1
chrUn_KI270442v1	38294	r_75_1	G	[chr13:63028414[G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_75_0	TR:VR	123:4	53:1
chr16	27502415	r_113_0	G	G[chrUn_GL000220v1:102455[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_113_1	TR:VR	561:3	377:0
chrUn_GL000220v1	102455	r_113_1	C	]chr16:27502415]C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_113_0	TR:VR	561:3	377:0
chr2	114237220	r_214_0	G	[chr2:122038320[T	.	PASS	SVTYPE=BND;MATEID=r_214_1	TR:VR	215:22	30:0
chr2	122038320	r_214_1	T	[chr2:114237220[T	.	PASS	SVTYPE=BND;MATEID=r_214_0	TR:VR	215:22	30:0
chr2	119522100	r_274_0	G	[chr2:120871785[C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_274_1	TR:VR	310:10	29:0
chr2	120871785	r_274_1	C	[chr2:119522100[C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_274_0	TR:VR	310:10	29:0
chr5	50496438	i_1226	T	<INS>	.	PASS	END=50496438;SVTYPE=INS;SVINSLEN=3908;SVINSSEQ=AAAGAAAGAATTTTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGCGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCGATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATTAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGTTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAAGTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAATCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAGCTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	40:9	11:0
chr8	142480904	r_528	G	<DEL>	.	PASS	END=143214601;SVTYPE=DEL;SVLEN=-733697	TR:VR	94:36	21:0
chr8	51528148	i_1380	C	<INS>	.	PASS	END=51528148;SVTYPE=INS;SVINSLEN=96;SVINSSEQ=AATGAGAACTCCTGGCTGGGCACAGTGGCTCATTCATGCCTGTAATCCCAGCACTTTTGGAGGCTGAGACAGGTGGATCACCTGAGGTCAGGAGTA	TR:VR	66:9	14:0
chr1	245974587	d_147	A	<DEL>	.	PASS	END=245975774;SVTYPE=DEL;SVLEN=-1187;SVINSLEN=156;SVINSSEQ=AGCCATCGTCTCCGGCCCAGGGAAAGCCATCGTCTCCGGCCCAGGGAAAGCCATCGTCTCCGGCCCAGGGAAAGCCATCGTCTCCGGCCCAGGGGAAAGCCATCGTCTCCGGCCCAGGGAAAGCCATCGTCTCCGGCCCAGGGAAAGCCATCGTCT	TR:VR	27:4	6:0
chr1	89725642	r_13	G	<DUP>	.	PASS	END=89865220;SVTYPE=DUP;SVLEN=139578	TR:VR	66:6	24:0
chr16	27676384	r_114_0	C	C]chrM:13167]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_114_1	TR:VR	551:8	513:0
chrM	13167	r_114_1	A	A]chr16:27676384]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_114_0	TR:VR	551:8	513:0
chr17	41704209	r_136_0	A	[chr17:44041448[T	.	PASS	SVTYPE=BND;MATEID=r_136_1	TR:VR	97:13	32:0
chr17	44041448	r_136_1	T	[chr17:41704209[T	.	PASS	SVTYPE=BND;MATEID=r_136_0	TR:VR	97:13	32:0
chr17_KI270730v1_random	76916	d_801	A	<INS>	.	PASS	END=76974;SVTYPE=INS;SVINSLEN=83;SVINSSEQ=ACGAATGGAATGGCATTGAATTTAATGGAATTTAATGGAATCGAAAGGTATAGAATGGAATAGAGCATAATCGAAAGATATCA	TR:VR	111:14	47:1
chr2	114368596	r_215_0	A	[chr2:115816385[A	.	PASS	SVTYPE=BND;MATEID=r_215_1	TR:VR	202:17	22:0
chr2	115816385	r_215_1	A	[chr2:114368596[A	.	PASS	SVTYPE=BND;MATEID=r_215_0	TR:VR	202:17	22:0
chr2	119528172	r_275_0	C	C[chr4:156175117[	.	PASS	SVTYPE=BND;MATEID=r_275_1	TR:VR	174:11	30:0
chr4	156175117	r_275_1	C	]chr2:119528172]C	.	PASS	SVTYPE=BND;MATEID=r_275_0	TR:VR	174:11	30:0
chr2	32069478	i_708	T	<INS>	.	PASS	END=32069478;SVTYPE=INS;SVINSLEN=102;SVINSSEQ=CTCAACTCTGTGGTTAACTATCAAGGAGCTGGTAATATGCTGCACTGCCTATATATGATCAAATAGAAACGAGTTGAATAGGCAGTCTCTTCAAAGGTTTCC	TR:VR	37:8	6:0
chr8	51802167	r_481	C	<DEL>	.	PASS	END=69904015;SVTYPE=DEL;SVLEN=-18101848	TR:VR	114:8	22:0
chr16	27676384	r_115_0	C	C]chrM:13167]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_115_1	TR:VR	554:4	511:0
chrM	13167	r_115_1	A	A]chr16:27676384]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_115_0	TR:VR	554:4	511:0
chr17	41886870	r_137_0	T	T]chr17:42560850]	.	PASS	SVTYPE=BND;MATEID=r_137_1	TR:VR	95:17	21:0
chr17	42560850	r_137_1	G	G]chr17:41886870]	.	PASS	SVTYPE=BND;MATEID=r_137_0	TR:VR	95:17	21:0
chr2	114485437	r_216_0	A	A]chr2:120285613]	.	PASS	SVTYPE=BND;MATEID=r_216_1	TR:VR	270:24	20:0
chr2	120285613	r_216_1	A	A]chr2:114485437]	.	PASS	SVTYPE=BND;MATEID=r_216_0	TR:VR	270:24	20:0
chr2	119546339	r_276	A	<DUP>	.	PASS	END=122050013;SVTYPE=DUP;SVLEN=2503674	TR:VR	269:19	32:0
chr22	24470145	r_339_0	T	]chr3:50756812]C	.	PASS	SVTYPE=BND;MATEID=r_339_1	TR:VR	116:14	27:0
chr3	50756812	r_339_1	C	C[chr22:24470145[	.	PASS	SVTYPE=BND;MATEID=r_339_0	TR:VR	116:14	27:0
chr3	149204777	d_1243	A	<DEL>	.	PASS	END=149205374;SVTYPE=DEL;SVLEN=-597;SVINSLEN=9;SVINSSEQ=TGTCAATGA	TR:VR	28:4	13:0
chr8	52381767	r_482_0	T	T]chr8:55301410]	.	PASS	SVTYPE=BND;MATEID=r_482_1	TR:VR	108:16	25:0
chr8	55301410	r_482_1	G	G]chr8:52381767]	.	PASS	SVTYPE=BND;MATEID=r_482_0	TR:VR	108:16	25:0
chrUn_GL000214v1	85777	r_546_0	C	]chrUn_KI270744v1:33218]T	.	PASS	SVTYPE=BND;MATEID=r_546_1	TR:VR	97:9	36:1
chrUn_KI270744v1	33218	r_546_1	T	T[chrUn_GL000214v1:85777[	.	PASS	SVTYPE=BND;MATEID=r_546_0	TR:VR	97:9	36:1
chr13	92413975	i_234	T	<INS>	.	PASS	END=92413975;SVTYPE=INS;SVINSLEN=196;SVINSSEQ=TTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAATCGTTTGACTTGATTTATATTACACAACAAAACCACCAGAAAATCAATGAGACAACAGACATAGCCACCGGTGTTGTTACTTATAGTCTGCTATTTTATCCTATTATTGAGAGCAACCAGACACAGAAATAAAAACTTACTGTGCTCAGGGGTAAT	TR:VR	16:3	13:0
chr17	42359356	r_138_0	G	[chr17:44150291[A	.	PASS	SVTYPE=BND;MATEID=r_138_1	TR:VR	121:11	27:0
chr17	44150291	r_138_1	A	[chr17:42359356[A	.	PASS	SVTYPE=BND;MATEID=r_138_0	TR:VR	121:11	27:0
chr2	114680711	r_217_0	A	A]chr2:116431101]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_217_1	TR:VR	169:3	31:0
chr2	116431101	r_217_1	A	A]chr2:114680711]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_217_0	TR:VR	169:3	31:0
chr2	90365978	r_192_0	T	[chr2:91439670[A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_192_1	TR:VR	290:6	108:0
chr2	91439670	r_192_1	A	[chr2:90365978[A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_192_0	TR:VR	290:6	108:0
chr22	24680426	r_340_0	G	G[chr3:50528031[	.	PASS	SVTYPE=BND;MATEID=r_340_1	TR:VR	110:13	29:0
chr3	50528031	r_340_1	C	]chr22:24680426]C	.	PASS	SVTYPE=BND;MATEID=r_340_0	TR:VR	110:13	29:0
chr4	146618993	r_396_0	A	]chr7:63032569]T	.	PASS	SVTYPE=BND;MATEID=r_396_1	TR:VR	60:5	34:0
chr7	63032569	r_396_1	T	T[chr4:146618993[	.	PASS	SVTYPE=BND;MATEID=r_396_0	TR:VR	60:5	34:0
chr5	181477723	r_410_0	A	]chr6:170743762]G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_410_1	TR:VR	108:3	61:0
chr6	170743762	r_410_1	G	G[chr5:181477723[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_410_0	TR:VR	108:3	61:0
chr8	52416179	r_483_0	A	[chr8:79888744[CCGC	.	PASS	SVTYPE=BND;MATEID=r_483_1;SVINSLEN=3;SVINSSEQ=CCG	TR:VR	72:4	37:0
chr8	79888744	r_483_1	C	[chr8:52416179[CGGC	.	PASS	SVTYPE=BND;MATEID=r_483_0;SVINSLEN=3;SVINSSEQ=CGG	TR:VR	72:4	37:0
chrUn_KI270757v1	3688	i_1501	C	<INS>	.	PASS	END=3688;SVTYPE=INS;SVINSLEN=685;SVINSSEQ=TGTGAAGGTATTCCCTTTTCCACCATAGGCCTCAAACCGCTCACAAATATCCCTCTGCAGATACAACAAAGGGACTGTTTCCAATCTGCTCAATCAAAAGATAGGCTCAACAACGTGAGATGAATGTACACGTCACAAAGAAGTTTCTCAGAATGCTTCTGTCTAGTTTTAATGTGAAGATATTTACTTTTTCACCATAGGCCTCAAAACACGCAAAACATCCATTTGCAAATTCCACAAAAAGACTGTTTCCAAACTGTTCAATCAAAAGAAAGGTTCAACTCTGTGAGGTGAAAACACACATCACGAAGAAGTTTCTCAGAAAGCTTCTGTCTAGTTTTTATGTGAGTATATTTCCTATTTCACCACAGGCCTCAAAGGAATCCCAAATATCCCTTTGCAGATTCTACAAAAAGAGTGTTTCTGAACTGCTCAATGAAAAGAAAGTTTCAACTCTGTGAGGTGAATGCACACATAAAAAGAAGTTTCTCAGAATGCTTCTGTATAGTTTATATGTGAAGATATTACTTTTTCACCATAGGCCTCTAAGTGCTCAGAAATATCCCTTTGCACTTTGTATAAAAAGACTATTTCAAAACTGCTCAATGAAAAGAAAGATTCATCTCTGTGTGATGAATGCACACATAAAAAATAAGTTTCTCAGAATGCTTCCGTCTGGTTTAAT	TR:VR	23:6	11:0
chr1	246234402	d_149	G	<INS>	.	PASS	END=246234396;SVTYPE=INS;SVINSLEN=87;SVINSSEQ=AAGCACTCCTCAATTCACACTGTGATGAACATACACCAGAGGAGAAGTGCTCCTTCCACTCACACTGTGATGAACATGTACCACATG	TR:VR	31:4	19:0
chr10	42066930	d_177	G	<DEL>	.	Too_low_VAF	END=42066997;SVTYPE=DEL;SVLEN=-67;SVINSLEN=13;SVINSSEQ=GAATTATTCAAAT	TR:VR	489:5	165:1
chr14_GL000225v1_random	107355	i_353	G	<INS>	.	Too_low_VAF	END=107355;SVTYPE=INS;SVINSLEN=395;SVINSSEQ=CCACGTGGCATCAACTAGAACCTCTAGCTCTCTTTGCCGGCCTCCTGGCTAGATCTAGGTGCAGTGCGCACCCCCGGCTGTCAGTGCAAGGGAGCCTACTGGCCTCTCTGTGCCCTTGTCCATCCATGAAATTCTAGCTGAGGCTCTCCCAACACCTTGCGAAGCTCTTTAGTCAAAGCCTGGAGAATACTTCTACATCTCCTTGACGATCAGTTCAGAAATATGTCACAATGCCCCCTCCCTGCGGAGCGTATAGAAGATTTGCATCATTTGGGTGATCAGTGAAGATATATATCACAATGTCCTCCGCTGTACAAAAAGCCTGGAAATGATTTACATCACCTCGGTGATCAGTGCATAGGTATGTCAGAAATCCCCAGTAGGCTGAACCTAGA	TR:VR	511:3	230:1
chr16	29974556	r_116	A	<DEL>	.	PASS	END=30400344;SVTYPE=DEL;SVLEN=-425788	TR:VR	84:5	22:0
chr17	42524447	r_139_0	G	G]chr17:42538847]	.	PASS	SVTYPE=BND;MATEID=r_139_1	TR:VR	96:11	24:0
chr17	42538847	r_139_1	C	C]chr17:42524447]	.	PASS	SVTYPE=BND;MATEID=r_139_0	TR:VR	96:11	24:0
chr2	114886535	r_218_0	T	]chr9:28780854]G	.	PASS	SVTYPE=BND;MATEID=r_218_1	TR:VR	127:8	29:0
chr9	28780854	r_218_1	G	G[chr2:114886535[	.	PASS	SVTYPE=BND;MATEID=r_218_0	TR:VR	127:8	29:0
chr2	119628775	r_277_0	A	]chr9:22199185]A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_277_1	TR:VR	212:4	31:0
chr9	22199185	r_277_1	A	A[chr2:119628775[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_277_0	TR:VR	212:4	31:0
chr2	32869285	d_915	A	<DEL>	.	PASS	END=32869453;SVTYPE=DEL;SVLEN=-168;SVINSLEN=165;SVINSSEQ=GCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTG	TR:VR	20:4	9:0
chr22	31914976	r_341	G	<DUP>	.	PASS	END=31934920;SVTYPE=DUP;SVLEN=19944	TR:VR	96:11	17:0
chr3	170254727	r_378	T	<DUP>	.	PASS	END=170427136;SVTYPE=DUP;SVLEN=172409	TR:VR	102:11	28:0
chr12	11031476	i_190	A	<INS>	.	Too_small_size	END=11031476;SVTYPE=INS;SVINSLEN=49;SVINSSEQ=TGGCCCCAGGGCTGAGCAGTAGCAAGGTTTCAGCTCTTAAAGACTGTGT	TR:VR	36:4	7:0
chr16	31104615	i_408	T	<INS>	.	PASS	END=31104615;SVTYPE=INS;SVINSLEN=298;SVINSSEQ=CCAGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGTGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTGCC	TR:VR	55:4	10:0
chr17	43846781	r_140	T	<DUP>	.	PASS	END=44015045;SVTYPE=DUP;SVLEN=168264	TR:VR	78:4	17:0
chr19	38540490	i_630	T	<INS>	.	Too_low_VAF	END=38540490;SVTYPE=INS;SVINSLEN=59;SVINSSEQ=AAACCTCCAATCATATACTACAGTATAATAAACCTCCAATCATATACTACAGTGTAACA	TR:VR	97:4	8:0
chr19	56061328	r_178_0	G	[chr19:56064903[C	.	PASS	SVTYPE=BND;MATEID=r_178_1	TR:VR	84:8	6:0
chr19	56064903	r_178_1	C	[chr19:56061328[C	.	PASS	SVTYPE=BND;MATEID=r_178_0	TR:VR	84:8	6:0
chr2	115057150	r_219	C	<DUP>	.	PASS	END=116388941;SVTYPE=DUP;SVLEN=1331791	TR:VR	210:14	24:0
chr2	119635962	r_278_0	A	AGCACTGTCATTCTTTTTGTTGTTGTTGT]chr2:121416706]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_278_1;SVINSLEN=28;SVINSSEQ=GCACTGTCATTCTTTTTGTTGTTGTTGT	TR:VR	369:5	26:0
chr2	121416706	r_278_1	A	AACAACAACAACAAAAAGAATGACAGTGC]chr2:119635962]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_278_0;SVINSLEN=28;SVINSSEQ=ACAACAACAACAAAAAGAATGACAGTGC	TR:VR	369:5	26:0
chr21	7923192	i_864	A	<INS>	.	Too_small_size;Too_low_VAF	END=7923192;SVTYPE=INS;SVINSLEN=36;SVINSSEQ=AATCCATTCCATTCCAATTCATTCCATTCATTTCCA	TR:VR	159:7	44:1
chr22	37018801	r_342_0	G	[chr22:37669450[T	.	PASS	SVTYPE=BND;MATEID=r_342_1	TR:VR	108:9	30:0
chr22	37669450	r_342_1	T	[chr22:37018801[T	.	PASS	SVTYPE=BND;MATEID=r_342_0	TR:VR	108:9	30:0
chr5	1956076	i_1190	C	<INS>	.	PASS	END=1956076;SVTYPE=INS;SVINSLEN=271;SVINSSEQ=GTTTGGTGCGTGGATCTCTGTGGGGTGTGCACCGAGATGGGGGACTGTGGGGTCATTTGGTGCGTGGATGTCTGTGGAAAATTGTGCACTGAGATGGGGACTGTGGGGTCATTTGGTGGATGGATCTCTGTGGGGTGTGCACTGAGATGGGAGCTGCAGGGTCATTTGGTGCGTGGATCTCTGTGGGGCGTGCACTGAGATGGGGGACTGTGGGGTCATTTGGTGCGTGGATCTCTGTGGGGTGTGCACTGAGATGGGGACTGTGGGGTTG	TR:VR	30:5	12:0
chr8	53157436	r_485	T	<DUP>	.	PASS	END=119283322;SVTYPE=DUP;SVLEN=66125886	TR:VR	91:9	34:0
chr9	136632476	i_1430	A	<INS>	.	PASS	END=136632476;SVTYPE=INS;SVINSLEN=636;SVINSSEQ=GGGAGGCACCGTCTCACCTCCCACAGACACCGAGAGAGTGAACGTTTGAGAACGAGAGAAGGCGCCATCTCACCTCCCACAGACAGCGAGAGAGTGAACGTGTCAGGAAGGAGAGGAGGTGTCTGCCTCACCTCCCACAGACGCCGTGACAGAGTAGAAGAGGTGTCAGGAAGGAGAGGAGGCGCTCGTCTCACCTCCCACAGACGCCGACAGAGTGAAAGTGTCAGGAAGGAGAGGAGGCGCTCGTCTCACCTCCCACAGACACCGAGAGAGTGAACGTGTCAGGAAGGAGAGGAGGCGCCATCTCACCTCCCACAGACACCGAGAGTGAACGTGTCAGGAAGGAGAGGAGGTGTCGTCTCACCTCCCACAGACACCGAGAGAGTGAACGTTTAGGAACGAGAGAAGGCGCCATCTCACCTCCCACAGACAGCGAGAAAGTGAACGTGTCAGAAGGAGAGGAGGCGTCAGTCTCACCTCCCACAGACACCGAGAGAGTGAACGTGTCAGGAAGGACAGGAGGCGCCATCTCACCTCCCACAGACAGCGAGAGAGTGAACGTGTCAGGGAAGGAGAGGGAGGCACCATCTCACCTCCCGCAGACACCGACAGAGTGAACATGTCAGGAAGGAGAGG	TR:VR	37:9	6:0
chr12	11031710	i_191	G	<INS>	.	PASS	END=11031710;SVTYPE=INS;SVINSLEN=135;SVINSSEQ=CTGATTGGTGCCTTTTACAGAGAGCTGATTGGTGCATTTTACAATCCTCTGGCTAGCTAGAGTGCTGATTGGTGCATTTTTACAGAGTGTTGACTGGTGCATTTTATAATTCCCATGCTACCTAAAGAGTGCTGA	TR:VR	36:4	6:0
chr17	44151023	r_141_0	T	TGGGG]chr17:44175407]	.	PASS	SVTYPE=BND;MATEID=r_141_1;SVINSLEN=4;SVINSSEQ=GGGG	TR:VR	90:15	27:0
chr17	44175407	r_141_1	A	ACCCC]chr17:44151023]	.	PASS	SVTYPE=BND;MATEID=r_141_0;SVINSLEN=4;SVINSSEQ=CCCC	TR:VR	90:15	27:0
chr2	115230693	r_220	G	<DUP>	.	Too_low_VAF	END=119677038;SVTYPE=DUP;SVLEN=4446345	TR:VR	304:9	29:0
chr2	119671246	r_279_0	C	[chr2:119671426[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_279_1	TR:VR	210:8	13:0
chr2	119671426	r_279_1	T	[chr2:119671246[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_279_0	TR:VR	210:8	13:0
chr22	10691589	r_333_0	A	]chrUn_KI270746v1:14193]C	.	PASS	SVTYPE=BND;MATEID=r_333_1	TR:VR	70:5	37:0
chrUn_KI270746v1	14193	r_333_1	C	C[chr22:10691589[	.	PASS	SVTYPE=BND;MATEID=r_333_0	TR:VR	70:5	37:0
chr22	37195813	r_343_0	G	G]chr22:37792349]	.	PASS	SVTYPE=BND;MATEID=r_343_1	TR:VR	112:6	26:0
chr22	37792349	r_343_1	A	A]chr22:37195813]	.	PASS	SVTYPE=BND;MATEID=r_343_0	TR:VR	112:6	26:0
chr3	38084374	i_1040	G	<INS>	.	PASS	END=38084374;SVTYPE=INS;SVINSLEN=2765;SVINSSEQ=ATGGTGGTAGTAGTGGTAGTAGTAGTAGTGGTGGTGGTAGTAGTAGTGGTAGTAGTAGTAGTGGTGGTGGTGGTGGTGGTAGTAGTAATAGTAGTGGTGGTGGTGGTAGTAGTGGTGGTAGTAGTAGTGGTAGTAGCAGTAGTGGTAGTAGTAGCAGTGGTGGTGGTAGCAGCAGTGGCAGTAGTAGTGGCAGCAGCAGCAGTGGGGGCAGTGGTAGCAGCAGTGGCAGCAGTAGTAGTGGCAGCAGCAGCAGTGGTGGTGGCAGCAGTGGTGGTAGTAGTGGTAGCAGCAGCAGTGGTGGTAGTAGTGGTGGTAGTAGTGGCAATAGTAGCAGTGGTGGTGGTAGTAGTAGTAGTGGTTGTGGTGGTAGTAGTAGTGGCAGCAGTAGTAGTGGCAGCAGCAGCAGTGGTGGTGGTAGTAGCGGCAGTAGTAGTGGCAACAGTAGTGGTGGTGGTGGCAGTAGTAGTGGTGGTTGTGGTAGCAGCAGTGGCAGCAGCAGCAGCGGCAGCAGCAGCAGCGGCGGCGGCAGCAGCGGCGGTGGCAGCAGTGGCAGCAGCAGCAGCGGCGGCGGCAGCAGTGGCGGTGGCAGCAGCGGTGGCGGCAGCAGCGGCAGCAGCAGCAGCGGCGGCGGCAGCAGTGGCGGCGGCAGCAGCGGCGGCAGCAGCGGCAACAGTGGCGGCGGCAGCAGCAGCAGCGGCTGCGGTGGTAGCAGCAGCAGCAGCAGCGGCGGCGGCGGCAGCGGCGGTAGCAGTAGTGGTGGTGGCAGCGGCGGCGGCAGCAGTGGCAACAGCAGCAGTGGCGGCGGCGGCAGCAGCAGCGGCGGCTGCAGCAGCAGCAGCGGCAGCAGCAGCAGCGGCAGCAGCAGCAGCGGCGGCAGCAGCAGCGGCGGCAGCAGCGGCACAGCAGCAGTGGCGGCGGCGGCAGCAGCGGCGGCGGCAGCAGCGGCGGCAGCAGCAGCAGCAGCAGCAGCGGCGGCAGCAGCGGCGGCGGCAGCAGCGGCAACAGTGGCGGCGGCAGCAGCAGCAGCGGCTGTGGTGGCAGCAGTGGCAGCAGCAGTGGCGGCGGTGGCGGCGGCGGCAGCAGCAGCGGCGGCGGCAGCAGCAGCAGCAGCAGCGGCGGCGGCAGCAGCGGTGGCAGCAGCAGCAGCAGCGGCGGCGGCAGCAGCAGCAGCGGCGGCTGTGGCAGCAGCAGCGGCAGCAGCAGCAGCGGCAGCAGCAGCAGCGGCGGCGGCAGCAGCAGCGGCGGGCAGTGGCGGCAGCAGCAGTGGCAGCAGCAGCAGCGGCGGCGGCAGCAGCGGCGGCAGCAGCAGCGGCGGCGGCAGCAGTGGCAGCAGCAGCGGCGGCGGCGGCAGCAGCGGCGGCAGCAGCGGCAACAGCAGTGGCAGCAGCAGCAGCGGCGGCGGCGGCAGTAGCAGCGGCAGCAGCAGTGGCAGCAGCAGCGGCAGGCAGCAGCGGCGGCGGCAGCAGCAGCGGCGGCAGCAGCAGCAGCAGCAGCAGCGGCGGCGGCAGCAGCGGCGGCAGTAGTGGCAACAGTAGCAGCGGCGGCGGCGGCAGCAGCAGCGGCGTTGCGGCAGCAGTAGTGGCAGCAGCAGTTGTAGCAGCAGCGGCGGTAGTAGTGGCGGTGGGCAGCGGCGGCAGCAGCAGCGGCAGCAGCAGTGGCAGCAGCAGCAGCAGCAGTGGCGGCGGCAGCAGCGGCGGCAGCAGCGGCAACAGCAGCAGCGGCGGCGGCGGCAGCAGCAGCGGCGGCTGCGGCAGCAGCAGCGTAGCAGCAGCAGCAGCAGCAGCGGCGGCGGCAGCAGCGGCGGCGGCAGCAGCGGCGGCAGCAGCAGCAGCAGCAGCGGCGGCGGCAGCAGCAGCAGCAGCAGCGGCGGCGGCAGTGGCGGCAGCAGCAGCGGCAACAGCAGCAGCGGCGGCGGCGGCAGCAGCAGCGGCGGCTGTGGCAGCAGCAGCGGCGGCTGCGGCAGCAGCAGCGGCAGCAGCAGCAGCAGCAGTGGCGGCGGCAGCAGTGGCGGCGGCAGCAGCGGCGGCAGCAGCGGCGGCAGCAGCAGCAGCGGCGGCAGCAGCAGCAGCAGCGGCGGCGGCAGCAGCGGCGGCAGCAGCGGCAACAGCAGCAGTGGTGGCGGCAGCAGCAGCAGCGGCAGCGGCGGCAGCAGCAGCGGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGCGGCGGCAGCAGCGGCAGCAGCAGCGGCGGCAGCGGGCAGCAGCGGCGAATCGCGGCAGCAGCAGCGGCGGCGGCAGCAGCGGCGGCGGCAGCAGCGGCAGCAGCAGCAGCGGCGGCGGGCAGCGGCAGCAGCAGCGGCAGCAGCAGCGGCGGCGGCAGCAGCAGCAGCAGTGCGGCGGCGGCAGCAGCAGCAGCGGCGGCGGCGGCAGCGGCGGCGGTGGCAGCAGCAGTGGCGGCGGCGGCAGCAGCGGTGGTGGTGGCAGCAGCAGCGGCAGCAGCAGCAGTGGTGGCGGTAGCAGTGGCGGCAGCAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGTAGCAGCAGCGGTGGCGGCAGCAGCGGCGGTAGCAGCAGCGGCAGCAGCAGCAGCGGCAGCAGCAGCGGCGGCGGCAGCAGCAGCAGCAGCAGCGGTGGTGGCAGCAGCGGCGGTAGTAGTGGTGGCAGCAGCGGCGGCAGCAGTGGCGGTGGTGGCGGTAGCAGTGGCGGCGGCGGCAGCAGTAGTGGTGGCGGCAGTAGTGGCGGTAGTA	TR:VR	52:7	15:0
chr7	134630215	r_433	G	<DUP>	.	PASS	END=134639696;SVTYPE=DUP;SVLEN=9481	TR:VR	34:9	26:0
chr8	53291610	r_486	A	<DUP>	.	PASS	END=79406244;SVTYPE=DUP;SVLEN=26114634	TR:VR	116:17	26:0
chr12	111290877	r_68_0	T	[chr17:28747814[C	.	PASS	SVTYPE=BND;MATEID=r_68_1	TR:VR	81:10	26:0
chr17	28747814	r_68_1	C	[chr12:111290877[C	.	PASS	SVTYPE=BND;MATEID=r_68_0	TR:VR	81:10	26:0
chr16	33338722	i_409	T	<INS>	.	PASS	END=33338722;SVTYPE=INS;SVINSLEN=52;SVINSSEQ=GGCTTGGCCGGCTGTGCTGGCTTGGCTGGCTTGGCTGGCTGGCTGACCGTGT	TR:VR	83:5	42:1
chr2	115298073	r_221_0	T	[chr9:30824357[A	.	PASS	SVTYPE=BND;MATEID=r_221_1	TR:VR	130:11	19:0
chr9	30824357	r_221_1	A	[chr2:115298073[A	.	PASS	SVTYPE=BND;MATEID=r_221_0	TR:VR	130:11	19:0
chr4	156228232	i_1156	C	<INS>	.	PASS	END=156228331;SVTYPE=INS;SVINSLEN=331;SVINSSEQ=GGGCAAATCACTAGAGGGCAGGAGTTTGAGACCAGCCTGGCCAACATGGTAAAACCCTGTCTCTACTAAAAATACAAACAATTAGTCGGGCATGGTGGCGGGCACCTGTAATCCCAGCTACTTGGGATTTTTTGAGACAGAGTCTCACTCTCTCTCCCAGGCTGGAGTGCAGTGGCACAATCTCGGCTCACTGCAAGCTCCACTTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACCTGCCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTAGCTGGGTGA	TR:VR	26:8	13:0
chr12	111468055	r_69_0	A	A]chr17:28948213]	.	PASS	SVTYPE=BND;MATEID=r_69_1	TR:VR	87:7	27:0
chr17	28948213	r_69_1	T	T]chr12:111468055]	.	PASS	SVTYPE=BND;MATEID=r_69_0	TR:VR	87:7	27:0
chr17	45531025	r_142	T	<DUP>	.	PASS	END=64877269;SVTYPE=DUP;SVLEN=19346244	TR:VR	58:3	19:0
chr2	115298264	r_222_0	T	T[chr9:30313434[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_222_1	TR:VR	138:4	26:0
chr9	30313434	r_222_1	A	]chr2:115298264]A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_222_0	TR:VR	138:4	26:0
chr2	119762266	r_280_0	C	[chr9:30827880[G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_280_1	TR:VR	200:7	26:0
chr9	30827880	r_280_1	G	[chr2:119762266[G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_280_0	TR:VR	200:7	26:0
chr21	21444254	i_924	T	<INS>	.	PASS	END=21444254;SVTYPE=INS;SVINSLEN=170;SVINSSEQ=TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCAT	TR:VR	36:4	10:0
chr4	158497004	r_397	T	<DEL>	.	PASS	END=158538780;SVTYPE=DEL;SVLEN=-41776	TR:VR	27:7	34:0
chr7	148812408	r_434	T	<DEL>	.	PASS	END=148832633;SVTYPE=DEL;SVLEN=-20225	TR:VR	27:6	28:0
chr7	62850717	i_1351	T	<INS>	.	PASS	END=62850717;SVTYPE=INS;SVINSLEN=889;SVINSSEQ=TGGAAATTCTATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGCATATTTTTTTTTTATTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTTCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAATATTCCATGATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCAT	TR:VR	26:4	17:0
chr2	115320135	r_223_0	T	T]chr2:119802503]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_223_1	TR:VR	275:5	21:0
chr2	119802503	r_223_1	G	G]chr2:115320135]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_223_0	TR:VR	275:5	21:0
chr3	46054453	r_355_0	C	CTTTGGCCTTTTTTGGCTTTCAACAGTTTTTATTGCAGGATATTCTGTCTTTCATTATAAGCCTAAGTGAACCCCAAAATGTCCCTTTGAAGATTCTACAAAAACAATGTTTACAAACTGCTGAATGTAAAGAAAGGTTTAACTCTCTGAGGTGAATCCACACATTACAAACCC[chr8:46493738[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_355_1;SVINSLEN=173;SVINSSEQ=TTTGGCCTTTTTTGGCTTTCAACAGTTTTTATTGCAGGATATTCTGTCTTTCATTATAAGCCTAAGTGAACCCCAAAATGTCCCTTTGAAGATTCTACAAAAACAATGTTTACAAACTGCTGAATGTAAAGAAAGGTTTAACTCTCTGAGGTGAATCCACACATTACAAACCC	TR:VR	94:3	20:0
chr8	46493738	r_355_1	G	]chr3:46054453]GGGTTTGTAATGTGTGGATTCACCTCAGAGAGTTAAACCTTTCTTTACATTCAGCAGTTTGTAAACATTGTTTTTGTAGAATCTTCAAAGGGACATTTTGGGGTTCACTTAGGCTTATAATGAAAGACAGAATATCCTGCAATAAAAACTGTTGAAAGCCAAAAAAGGCCAAAG	.	Too_low_VAF	SVTYPE=BND;MATEID=r_355_0;SVINSLEN=173;SVINSSEQ=GGGTTTGTAATGTGTGGATTCACCTCAGAGAGTTAAACCTTTCTTTACATTCAGCAGTTTGTAAACATTGTTTTTGTAGAATCTTCAAAGGGACATTTTGGGGTTCACTTAGGCTTATAATGAAAGACAGAATATCCTGCAATAAAAACTGTTGAAAGCCAAAAAAGGCCAAA	TR:VR	94:3	20:0
chr4	159146180	r_398	T	<DUP>	.	PASS	END=159824078;SVTYPE=DUP;SVLEN=677898	TR:VR	44:4	30:0
chr6	170146050	i_1310	A	<INS>	.	PASS	END=170146050;SVTYPE=INS;SVINSLEN=1688;SVINSSEQ=GGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTGGGTGAGGGGGTGTGGTGGAGGTGGGTGAGGTGTGTAGGAGGGTTTGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGGGTGTAGGTGGGTGAGGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTTTGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGAGGGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGGGTGAGGTGTGTAGGAGGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTGTAGGAGGGTGTAGGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTTTGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGGTGAGGTGTGTAGGAGGGGTGAGGTGTGTAGGAGGGTTTGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGAGGTGTGTAGGTGGGTTTGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGTGGTGTGTAGGGAGGGTGAGGTGTGTAGGAGGGTGAGGGGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGGTGTGTAGGAGGGTGAGGTGTGTAGGGGAGGGGTGAGGTGTGTAGGAGGGTTTGGTGTGTAGGAGGTGGGTGAGGTGTGTGTGTAGGAGGGTGAGGGGTGTAGGTG	TR:VR	28:6	15:0
chr8	15417270	r_446_0	C	[chr8:69533587[T	.	PASS	SVTYPE=BND;MATEID=r_446_1	TR:VR	47:9	29:0
chr8	69533587	r_446_1	T	[chr8:15417270[T	.	PASS	SVTYPE=BND;MATEID=r_446_0	TR:VR	47:9	29:0
chr17	46231902	r_143_0	G	[chr17:46277011[C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_143_1	TR:VR	182:7	43:0
chr17	46277011	r_143_1	C	[chr17:46231902[C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_143_0	TR:VR	182:7	43:0
chr19	57018057	i_659	C	<INS>	.	PASS	END=57018057;SVTYPE=INS;SVINSLEN=439;SVINSSEQ=CCTCCATCCCAGTCCCCTCTTCTCCCTCCCCTTCCCTCCGTCTCCATCTCCTCTTCTCCTTCCTCTTCCCTCCCTCTCTGTCCCCTCTTCTCCCTCCCCTTCCCTCCATCTCATCTCCTCTTCTCCCTCCCCTTCCCTTCCTCTCATCCCCTCTTCTCCCTCCCCCCTCCCTCTGATCCCCTCTTATCCCTCCACTTCCCTCCATCTCATCCCCTCTCCCCTCCCTTCTCTCCCCTCCATCTCTCCGTTCCTCTTCTCCCCTCCCCTTCCCTCCCTCTCATCCCCTCTTCTTCCCCTCCCCTTCCCTCCCTCTGATCCCCTCTTATCCCTCCACTTCCCTCCCTCTCATCCCCTCTTCTCCTCCCCCTTCCCTCCGTCCTCATCTCCTCTTCTCCTTCCTCTTCCCTCCCTCTCATCCCCCTCTTCACTCCTCCCCTTC	TR:VR	66:5	15:0
chr2	115386251	r_224_0	A	[chr9:42981634[T	.	PASS	SVTYPE=BND;MATEID=r_224_1	TR:VR	125:9	32:0
chr9	42981634	r_224_1	T	[chr2:115386251[T	.	PASS	SVTYPE=BND;MATEID=r_224_0	TR:VR	125:9	32:0
chr2	38010854	r_185_0	A	AATCTC]chr20:29386058]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_185_1;SVINSLEN=5;SVINSSEQ=ATCTC	TR:VR	96:4	28:0
chr20	29386058	r_185_1	A	AGAGAT]chr2:38010854]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_185_0;SVINSLEN=5;SVINSSEQ=GAGAT	TR:VR	96:4	28:0
chr8	15474294	r_447	A	<DEL>	.	PASS	END=19307970;SVTYPE=DEL;SVLEN=-3833676	TR:VR	48:5	26:0
chr8	55315684	r_487	A	<DUP>	.	PASS	END=79405509;SVTYPE=DUP;SVLEN=24089825	TR:VR	94:11	20:0
chrY	11326951	d_1734	C	<DEL>	.	Too_low_VAF	END=11327844;SVTYPE=DEL;SVLEN=-893;SVINSLEN=4;SVINSSEQ=CAAC	TR:VR	582:4	216:1
chr14	106788135	d_317	T	<DEL>	.	PASS	END=106788460;SVTYPE=DEL;SVLEN=-325	TR:VR	33:4	16:0
chr17	47230913	r_144_0	T	[chr17:80259734[C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_144_1	TR:VR	94:4	27:0
chr17	80259734	r_144_1	C	[chr17:47230913[C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_144_0	TR:VR	94:4	27:0
chr17_GL000205v2_random	22026	i_502	C	<INS>	.	Too_low_VAF	END=22026;SVTYPE=INS;SVINSLEN=100;SVINSSEQ=ATTCAGATTCCTGTAGCAGTGTTCTGGAATCCCTAGTGAGGGGACCAACATTTTGAACCTGGCAGCAGTGTTCTGGAATCCTATGTGAGGGACAAACATT	TR:VR	150:4	51:0
chr17_KI270730v1_random	96555	d_808	A	<DEL>	.	Too_low_VAF	END=96652;SVTYPE=DEL;SVLEN=-97;SVINSLEN=81;SVINSSEQ=ACTGAGATTGTGCACCTCAGTGCAGCCTGGGTGATAGAGTGAGACCCTGTCAAAAGAAAGGAATGGAAGGAATGGATTTAG	TR:VR	183:4	72:0
chr19	38675482	r_165_0	C	[chr19:38676560[A	.	PASS	SVTYPE=BND;MATEID=r_165_1	TR:VR	106:7	13:0
chr19	38676560	r_165_1	A	[chr19:38675482[A	.	PASS	SVTYPE=BND;MATEID=r_165_0	TR:VR	106:7	13:0
chr2	115386487	r_225	G	<DEL>	.	Too_low_VAF	END=119069425;SVTYPE=DEL;SVLEN=-3682938	TR:VR	256:8	33:0
chr2	119874434	r_281_0	C	C]chr2:120952655]	.	PASS	SVTYPE=BND;MATEID=r_281_1	TR:VR	342:30	24:0
chr2	120952655	r_281_1	G	G]chr2:119874434]	.	PASS	SVTYPE=BND;MATEID=r_281_0	TR:VR	342:30	24:0
chr2	158657083	r_313_0	G	[chr2:158700370[T	.	PASS	SVTYPE=BND;MATEID=r_313_1	TR:VR	58:8	30:0
chr2	158700370	r_313_1	T	[chr2:158657083[T	.	PASS	SVTYPE=BND;MATEID=r_313_0	TR:VR	58:8	30:0
chr2	41959981	r_186	T	<DUP>	.	PASS	END=41964068;SVTYPE=DUP;SVLEN=4087;SVINSLEN=1;SVINSSEQ=A	TR:VR	28:3	15:0
chr2	90388583	i_736	C	<INS>	.	Too_low_VAF	END=90388583;SVTYPE=INS;SVINSLEN=505;SVINSSEQ=ATCACTTGGGCCCAGGAGTTCAAGACCAGCCTGGGCAACATAGTGAGACACTGTCTTTACAAAAAAAAAAAAAAAAATTAGCCAGGTGTGGTGGCACGTACCTGTGATTCCAGCTACTCAAGAGGCTGAGGTGGGAGGATTGCTTGAGCTTGGGAAGTTGAGGCTTCAGTGAGCCAAGATTGAGCCACTGCATTCCAGCCTGGGCAACAGAGCAAGACCCTTTCTGGCAAAAAAAAAAAAAAAAAAGAAAAGAGAAAGTCTGGGCACAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCAGATCACTGGAGGTCAGGAGTTTGAGACCAGCCTGGGCAACATGGTGAAAACCCATCTCTACTAAACATACAAATATTAGCCAGGAGTGGTTGTGTGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCGGGAAAATCACTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCTGAGATGGGGCCACATCA	TR:VR	228:6	210:0
chr4	1643461	r_383	G	<DUP>	.	PASS	END=1950356;SVTYPE=DUP;SVLEN=306895	TR:VR	67:10	16:0
chr8	15484461	r_448	A	<DUP>	.	PASS	END=142017145;SVTYPE=DUP;SVLEN=126532684	TR:VR	43:14	29:0
chr8	56131521	d_1529	C	<DEL>	.	PASS	END=56131608;SVTYPE=DEL;SVLEN=-87	TR:VR	74:29	15:0
chr10	1037910	r_34_0	C	]chr11:33997926]CCC	.	PASS	SVTYPE=BND;MATEID=r_34_1;SVINSLEN=2;SVINSSEQ=CC	TR:VR	67:9	21:0
chr11	33997926	r_34_1	C	CGG[chr10:1037910[	.	PASS	SVTYPE=BND;MATEID=r_34_0;SVINSLEN=2;SVINSSEQ=GG	TR:VR	67:9	21:0
chr10	53933417	d_182	T	<DEL>	.	PASS	END=53934554;SVTYPE=DEL;SVLEN=-1137	TR:VR	16:3	29:0
chr12	116980470	r_70	T	<DUP>	.	PASS	END=117212372;SVTYPE=DUP;SVLEN=231902	TR:VR	61:5	25:0
chr14_KI270723v1_random	33874	r_95_0	C	]chrY:11305276]CACTTTGTTGATCAGTTCAGAGATGTGTT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_95_1;SVINSLEN=28;SVINSSEQ=CACTTTGTTGATCAGTTCAGAGATGTGT	TR:VR	461:5	218:1
chrY	11305276	r_95_1	T	TACACATCTCTGAACTGATCAACAAAGTG[chr14_KI270723v1_random:33874[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_95_0;SVINSLEN=28;SVINSSEQ=ACACATCTCTGAACTGATCAACAAAGTG	TR:VR	461:5	218:1
chr19	58602908	r_179_0	T	T]chr19:58605488]	.	PASS	SVTYPE=BND;MATEID=r_179_1	TR:VR	52:6	28:0
chr19	58605488	r_179_1	A	A]chr19:58602908]	.	PASS	SVTYPE=BND;MATEID=r_179_0	TR:VR	52:6	28:0
chr2	115406097	r_226_0	T	[chr2:119059798[G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_226_1	TR:VR	238:9	33:0
chr2	119059798	r_226_1	G	[chr2:115406097[G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_226_0	TR:VR	238:9	33:0
chr2	120131429	r_282	T	<DUP>	.	Too_low_VAF	END=121285846;SVTYPE=DUP;SVLEN=1154417	TR:VR	296:3	26:0
chr2	158686949	r_314_0	T	T]chr2:158725229]	.	PASS	SVTYPE=BND;MATEID=r_314_1	TR:VR	55:5	36:0
chr2	158725229	r_314_1	C	C]chr2:158686949]	.	PASS	SVTYPE=BND;MATEID=r_314_0	TR:VR	55:5	36:0
chr2	43635591	r_187_0	G	]chr5:175872402]C	.	PASS	SVTYPE=BND;MATEID=r_187_1	TR:VR	83:6	29:0
chr5	175872402	r_187_1	C	C[chr2:43635591[	.	PASS	SVTYPE=BND;MATEID=r_187_0	TR:VR	83:6	29:0
chr20	28521217	r_324_0	T	TCTGTAAGTGGAAACTTGGAATGCTTTGAGGCCTATGGTGGAAAAGGAAATATCTTCCCATAAAAAGTAGACAGAAGAATTCTCCGTAACTACTTTGTGATGTGTGTACTCAACTCACAGAGTTGAACTTTTCTTTTGAAAGAGAAGTTTTGAAACACTCTTTTCG[chr9:40953480[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_324_1;SVINSLEN=165;SVINSSEQ=CTGTAAGTGGAAACTTGGAATGCTTTGAGGCCTATGGTGGAAAAGGAAATATCTTCCCATAAAAAGTAGACAGAAGAATTCTCCGTAACTACTTTGTGATGTGTGTACTCAACTCACAGAGTTGAACTTTTCTTTTGAAAGAGAAGTTTTGAAACACTCTTTTCG	TR:VR	236:4	92:0
chr9	40953480	r_324_1	A	]chr20:28521217]CGAAAAGAGTGTTTCAAAACTTCTCTTTCAAAAGAAAAGTTCAACTCTGTGAGTTGAGTACACACATCACAAAGTAGTTACGGAGAATTCTTCTGTCTACTTTTTATGGGAAGATATTTCCTTTTCCACCATAGGCCTCAAAGCATTCCAAGTTTCCACTTACAGA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_324_0;SVINSLEN=165;SVINSSEQ=CGAAAAGAGTGTTTCAAAACTTCTCTTTCAAAAGAAAAGTTCAACTCTGTGAGTTGAGTACACACATCACAAAGTAGTTACGGAGAATTCTTCTGTCTACTTTTTATGGGAAGATATTTCCTTTTCCACCATAGGCCTCAAAGCATTCCAAGTTTCCACTTACAG	TR:VR	236:4	92:0
chr22	38964074	r_344	C	<DEL>	.	PASS	END=38970137;SVTYPE=DEL;SVLEN=-6063;SVINSLEN=49;SVINSSEQ=CTGTCCCCGGACGGGGACTCCCTTGCATGAGACAGCTGGCCAAGGAGAG	TR:VR	49:4	8:0
chr7	70702732	r_427	G	<DEL>	.	PASS	END=70726742;SVTYPE=DEL;SVLEN=-24010	TR:VR	37:4	19:0
chr8	59723604	r_488	C	<DUP>	.	PASS	END=77289710;SVTYPE=DUP;SVLEN=17566106	TR:VR	86:19	23:0
chr10	1038063	r_35_0	C	C[chr2:20451763[	.	PASS	SVTYPE=BND;MATEID=r_35_1	TR:VR	59:8	22:0
chr2	20451763	r_35_1	C	]chr10:1038063]C	.	PASS	SVTYPE=BND;MATEID=r_35_0	TR:VR	59:8	22:0
chr10	56132648	i_89	T	<INS>	.	PASS	END=56132648;SVTYPE=INS;SVINSLEN=223;SVINSSEQ=AAAATTTCCTTTCCCCCGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAGAAAGAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	25:8	13:0
chr12	117606726	r_71_0	T	TCCCTCCCTCCCTCCCTCCCTCC]chr22:46470005]	.	PASS	SVTYPE=BND;MATEID=r_71_1;SVINSLEN=22;SVINSSEQ=CCCTCCCTCCCTCCCTCCCTCC	TR:VR	101:8	39:0
chr22	46470005	r_71_1	G	GGGAGGGAGGGAGGGAGGGAGGG]chr12:117606726]	.	PASS	SVTYPE=BND;MATEID=r_71_0;SVINSLEN=22;SVINSSEQ=GGAGGGAGGGAGGGAGGGAGGG	TR:VR	101:8	39:0
chr16	948944	d_608	A	<INS>	.	PASS	END=948953;SVTYPE=INS;SVINSLEN=106;SVINSSEQ=CGACAGAGTCAGAGACGACAGAGTCAGAGCCAACGACAGAGTCAGCCAACGACAGAGTCAGAGCCAACGACAGAGTCAGCCAACGACAGTCAGCCAACGACAGAGT	TR:VR	34:6	10:0
chr17	48340804	r_146_0	G	[chr19:45667494[A	.	PASS	SVTYPE=BND;MATEID=r_146_1	TR:VR	86:7	30:0
chr19	45667494	r_146_1	A	[chr17:48340804[A	.	PASS	SVTYPE=BND;MATEID=r_146_0	TR:VR	86:7	30:0
chr2	120285847	r_283_0	A	[chr2:120756229[A	.	PASS	SVTYPE=BND;MATEID=r_283_1	TR:VR	306:19	30:0
chr2	120756229	r_283_1	A	[chr2:120285847[A	.	PASS	SVTYPE=BND;MATEID=r_283_0	TR:VR	306:19	30:0
chr2	43933544	r_188_0	T	T[chr5:175826364[	.	PASS	SVTYPE=BND;MATEID=r_188_1	TR:VR	69:11	15:0
chr5	175826364	r_188_1	A	]chr2:43933544]A	.	PASS	SVTYPE=BND;MATEID=r_188_0	TR:VR	69:11	15:0
chr20	28728979	r_325_0	C	]chrY:10933070]AAA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_325_1;SVINSLEN=2;SVINSSEQ=AA	TR:VR	210:3	58:1
chrY	10933070	r_325_1	A	ATT[chr20:28728979[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_325_0;SVINSLEN=2;SVINSSEQ=TT	TR:VR	210:3	58:1
chr22	10721231	d_1146	C	<DEL>	.	Too_low_VAF	END=10721296;SVTYPE=DEL;SVLEN=-65	TR:VR	129:3	49:0
chr3	51857063	r_356	A	<DEL>	.	Too_low_VAF	END=57439976;SVTYPE=DEL;SVLEN=-5582913;SVINSLEN=124;SVINSSEQ=TCCAGAACATCAGAAGGAACAAACTCCAGACACACCATCTTTAAGAACTGTAACATTCACTGCAAGGGTCCGTGGCTTCACTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCTGGACATA	TR:VR	85:3	33:0
chr7	76515456	r_428	G	<DEL>	.	PASS	END=76527666;SVTYPE=DEL;SVLEN=-12210	TR:VR	38:12	12:0
chr8	60440459	r_489	T	<DUP>	.	PASS	END=140651723;SVTYPE=DUP;SVLEN=80211264	TR:VR	74:24	26:0
chr17	48567883	r_147_0	A	A]chr19:45820888]	.	PASS	SVTYPE=BND;MATEID=r_147_1	TR:VR	109:7	18:0
chr19	45820888	r_147_1	C	C]chr17:48567883]	.	PASS	SVTYPE=BND;MATEID=r_147_0	TR:VR	109:7	18:0
chr19	39411859	r_166	C	<DUP>	.	PASS	END=39471256;SVTYPE=DUP;SVLEN=59397	TR:VR	274:82	20:0
chr2	115424388	r_228_0	C	[chr2:122130164[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_228_1	TR:VR	223:5	31:0
chr2	122130164	r_228_1	T	[chr2:115424388[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_228_0	TR:VR	223:5	31:0
chr2	120305847	d_996	C	<DEL>	.	Too_small_size;Too_low_VAF	END=120305891;SVTYPE=DEL;SVLEN=-44	TR:VR	142:7	14:0
chr3	54276778	d_1217	A	<DEL>	.	PASS	END=54281893;SVTYPE=DEL;SVLEN=-5115	TR:VR	49:9	17:0
chr5	34385375	r_404	A	<DUP>	.	PASS	END=34851348;SVTYPE=DUP;SVLEN=465973	TR:VR	75:14	14:0
chr7	87054415	r_429_0	G	G]chr7:87141186]	.	PASS	SVTYPE=BND;MATEID=r_429_1	TR:VR	43:6	23:0
chr7	87141186	r_429_1	T	T]chr7:87054415]	.	PASS	SVTYPE=BND;MATEID=r_429_0	TR:VR	43:6	23:0
chr8	17324286	r_450_0	T	[chr8:44775574[A	.	PASS	SVTYPE=BND;MATEID=r_450_1	TR:VR	58:3	12:0
chr8	44775574	r_450_1	A	[chr8:17324286[A	.	PASS	SVTYPE=BND;MATEID=r_450_0	TR:VR	58:3	12:0
chr8	60468919	r_490	C	<DEL>	.	PASS	END=140866344;SVTYPE=DEL;SVLEN=-80397425	TR:VR	64:15	30:0
chrX	68349391	i_1537	T	<INS>	.	PASS	END=68349391;SVTYPE=INS;SVINSLEN=316;SVINSSEQ=AAAAAGTCAGGAAATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGAAGGCCGAGGCAGGCAGATCACGAGGTCAGGAGATGGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGAAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	TR:VR	36:3	8:0
chr11	33997732	r_47_0	A	]chr9:127572110]A	.	PASS	SVTYPE=BND;MATEID=r_47_1	TR:VR	64:8	24:0
chr9	127572110	r_47_1	A	A[chr11:33997732[	.	PASS	SVTYPE=BND;MATEID=r_47_0	TR:VR	64:8	24:0
chr19	39678859	r_167	T	<DUP>	.	PASS	END=41558952;SVTYPE=DUP;SVLEN=1880093	TR:VR	169:10	34:0
chr2	115432223	r_229	A	<DEL>	.	Too_low_VAF	END=120996418;SVTYPE=DEL;SVLEN=-5564195;SVINSLEN=34;SVINSSEQ=AAAAAGCTGGATTGAGGATGTGGTAGGTTAGATG	TR:VR	280:4	25:0
chr2	120313689	r_284	A	<DUP>	.	Too_low_VAF	END=121836452;SVTYPE=DUP;SVLEN=1522763	TR:VR	275:3	30:0
chr2	164624790	r_315	C	<DEL>	.	PASS	END=164657129;SVTYPE=DEL;SVLEN=-32339	TR:VR	44:6	32:0
chr22	40489990	r_345	C	<DUP>	.	PASS	END=40744635;SVTYPE=DUP;SVLEN=254645;SVINSLEN=1;SVINSSEQ=A	TR:VR	86:6	26:0
chr4	49647701	d_1302	A	<DEL>	.	Too_low_VAF	END=49647904;SVTYPE=DEL;SVLEN=-203;SVINSLEN=73;SVINSSEQ=CCCGAATGGAATGGAATGGAATGGAATAGAATGGTATGGAATGGAATTGAATGGAAAGGAATCAACACGAAGG	TR:VR	230:5	56:0
chr6	2324971	d_1431	C	<DEL>	.	PASS	END=2325436;SVTYPE=DEL;SVLEN=-465	TR:VR	33:4	19:0
chr7	87137733	r_430_0	C	[chr7:87141227[A	.	PASS	SVTYPE=BND;MATEID=r_430_1	TR:VR	31:6	15:0
chr7	87141227	r_430_1	A	[chr7:87137733[A	.	PASS	SVTYPE=BND;MATEID=r_430_0	TR:VR	31:6	15:0
chr8	17324289	r_451_0	C	[chr8:44916115[G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_451_1	TR:VR	97:4	25:0
chr8	44916115	r_451_1	G	[chr8:17324289[G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_451_0	TR:VR	97:4	25:0
chr8	64034220	r_491_0	A	AC]chr8:111943887]	.	PASS	SVTYPE=BND;MATEID=r_491_1;SVINSLEN=1;SVINSSEQ=C	TR:VR	74:10	30:0
chr8	111943887	r_491_1	T	TG]chr8:64034220]	.	PASS	SVTYPE=BND;MATEID=r_491_0;SVINSLEN=1;SVINSSEQ=G	TR:VR	74:10	30:0
chrUn_KI270757v1	69169	i_1508	A	<INS>	.	PASS	END=69169;SVTYPE=INS;SVINSLEN=343;SVINSSEQ=GATATGTTCAACTCTGTGTGTTGAATGCACACACGACAAAGAAGTTTCTCAGAATGCTCCTGTGTAGTTTTTTTGTTAAGATATTTTCTTTTTCTCTATACTCTGCAAAGGGCTCTTAATATCCGCTTGCAGATTCTACAAAAAGAAGGTTTCCAAACTGCTCTAACAAAAGATAGGTTCAACTCTTTGAGTTGAATGCTCACATCACAAAGAAGTTTCTCAGATTGATTCACTGTAGTTTTTATGTGAAGATATTTCCTCTTCCAACATAGGCATCAAAGGGCTCCAAATATCCACTTACAGATTCTACAAAAAGAGAGTTCCAAAACGCTCTATAAAAAGA	TR:VR	260:13	67:1
chr19	39850473	r_168	C	<DEL>	.	Too_low_VAF	END=39877412;SVTYPE=DEL;SVLEN=-26939	TR:VR	214:5	21:0
chr2	115707920	r_230_0	C	[chr2:121542392[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_230_1	TR:VR	204:7	30:0
chr2	121542392	r_230_1	T	[chr2:115707920[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_230_0	TR:VR	204:7	30:0
chr2	120813229	r_285_0	C	]chr9:28883487]TTGGC	.	Too_low_VAF	SVTYPE=BND;MATEID=r_285_1;SVINSLEN=4;SVINSSEQ=TTGG	TR:VR	166:8	34:0
chr9	28883487	r_285_1	C	CCCAA[chr2:120813229[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_285_0;SVINSLEN=4;SVINSSEQ=CCAA	TR:VR	166:8	34:0
chr22_KI270736v1_random	173978	d_1207	A	<DEL>	.	Too_low_VAF	END=174161;SVTYPE=DEL;SVLEN=-183;SVINSLEN=3;SVINSSEQ=TTG	TR:VR	406:9	139:0
chr8	17324289	r_449_0	C	[chr8:44114410[G	.	PASS	SVTYPE=BND;MATEID=r_449_1	TR:VR	99:8	34:0
chr8	44114410	r_449_1	G	[chr8:17324289[G	.	PASS	SVTYPE=BND;MATEID=r_449_0	TR:VR	99:8	34:0
chr8	65195310	r_492	A	<DEL>	.	PASS	END=65573801;SVTYPE=DEL;SVLEN=-378491	TR:VR	74:12	28:0
chrX	108048001	i_1543	T	<INS>	.	PASS	END=108048001;SVTYPE=INS;SVINSLEN=65;SVINSSEQ=ACACATATATATATATACACATATATATATATATATACACACACACACACACACACACACACACA	TR:VR	24:3	14:0
chrX	75747115	d_1694	C	<DEL>	.	Too_small_size	END=75747125;SVTYPE=DEL;SVLEN=-10;SVINSLEN=1;SVINSSEQ=T	TR:VR	17:4	14:0
chr12	39023266	r_61_0	T	[chr17:4323677[T	.	PASS	SVTYPE=BND;MATEID=r_61_1	TR:VR	64:11	16:0
chr17	4323677	r_61_1	T	[chr12:39023266[T	.	PASS	SVTYPE=BND;MATEID=r_61_0	TR:VR	64:11	16:0
chr17	59687254	r_148	A	<DEL>	.	PASS	END=59843775;SVTYPE=DEL;SVLEN=-156521	TR:VR	65:6	32:0
chr18	80075731	d_842	G	<INS>	.	PASS	END=80075709;SVTYPE=INS;SVINSLEN=98;SVINSSEQ=AGCACAGGGTCCCAGAGCACAGAATCCCAGAGCACAGGGTCCCAGAGCACAGAATCCCAGAGCACAGGGTCCCAGAGCACAGGGTCCCAGAGCACAGG	TR:VR	44:4	11:0
chr2	115710689	r_231_0	T	T[chr9:28899174[	.	PASS	SVTYPE=BND;MATEID=r_231_1	TR:VR	82:5	42:0
chr9	28899174	r_231_1	C	]chr2:115710689]C	.	PASS	SVTYPE=BND;MATEID=r_231_0	TR:VR	82:5	42:0
chr2	120825265	r_286_0	A	AGAG[chr9:21999459[	.	PASS	SVTYPE=BND;MATEID=r_286_1;SVINSLEN=3;SVINSSEQ=GAG	TR:VR	165:9	26:0
chr9	21999459	r_286_1	T	]chr2:120825265]CTCT	.	PASS	SVTYPE=BND;MATEID=r_286_0;SVINSLEN=3;SVINSSEQ=CTC	TR:VR	165:9	26:0
chr2	170076111	r_316_0	A	[chr2:188580425[C	.	PASS	SVTYPE=BND;MATEID=r_316_1	TR:VR	46:5	29:0
chr2	188580425	r_316_1	C	[chr2:170076111[C	.	PASS	SVTYPE=BND;MATEID=r_316_0	TR:VR	46:5	29:0
chr2	6325343	d_910	C	<DEL>	.	PASS	END=6325448;SVTYPE=DEL;SVLEN=-105	TR:VR	23:4	19:0
chr22	10722284	i_953	T	<INS>	.	PASS	END=10722284;SVTYPE=INS;SVINSLEN=161;SVINSSEQ=TGCATTCTATTTCATTCCATTCGAGTCCATTCCTTTCTATTCCATTCGAGTCAATTCCATTCCATTCCATTCGTGTGCATTCCATTCCATTCCATTCCGTTTCACTCGAGTGGATTCCTTTCAATTCCATTCCATTGGAGTCCCTTCCGTTCCATTCGAGT	TR:VR	133:14	56:1
chr6	24688739	r_412	T	<DUP>	.	PASS	END=24951421;SVTYPE=DUP;SVLEN=262682	TR:VR	49:6	27:0
chr8	17328769	r_452	C	<DEL>	.	PASS	END=77299941;SVTYPE=DEL;SVLEN=-59971172	TR:VR	100:27	16:0
chr8	65610197	r_493	A	<DEL>	.	PASS	END=140552613;SVTYPE=DEL;SVLEN=-74942416	TR:VR	70:12	31:0
chr12	39198621	r_62_0	A	A]chr17:4546853]	.	PASS	SVTYPE=BND;MATEID=r_62_1	TR:VR	62:4	30:0
chr17	4546853	r_62_1	T	T]chr12:39198621]	.	PASS	SVTYPE=BND;MATEID=r_62_0	TR:VR	62:4	30:0
chr17	59836430	d_749	T	<DEL>	.	PASS	END=59842668;SVTYPE=DEL;SVLEN=-6238;SVINSLEN=1;SVINSSEQ=T	TR:VR	35:8	24:0
chr2	115796336	r_232	G	<DUP>	.	PASS	END=121647364;SVTYPE=DUP;SVLEN=5851028	TR:VR	210:15	18:0
chr2	120872072	r_287_0	A	A[chr4:133939526[	.	PASS	SVTYPE=BND;MATEID=r_287_1	TR:VR	178:10	31:0
chr4	133939526	r_287_1	A	]chr2:120872072]A	.	PASS	SVTYPE=BND;MATEID=r_287_0	TR:VR	178:10	31:0
chr2	170076400	r_317_0	A	A]chr2:201783231]	.	PASS	SVTYPE=BND;MATEID=r_317_1	TR:VR	52:5	30:0
chr2	201783231	r_317_1	A	A]chr2:170076400]	.	PASS	SVTYPE=BND;MATEID=r_317_0	TR:VR	52:5	30:0
chr2	90394189	i_738	C	<INS>	.	Too_low_VAF	END=90394189;SVTYPE=INS;SVINSLEN=104;SVINSSEQ=AATGAATGGAATCAAATGGAATCATCTAATGGACGCGAATGGAATCATCATCGAAAGCAATGAAATGTAATTCAATCGAATGGACATGAATGGAATCATCATTG	TR:VR	197:7	196:1
chr22	10722264	d_1150	T	<DEL>	.	Too_low_VAF	END=10722378;SVTYPE=DEL;SVLEN=-114;SVINSLEN=24;SVINSSEQ=TCCACTTCATTCCATTCGACTCCA	TR:VR	134:3	56:0
chr8	17777517	r_453	C	<DEL>	.	PASS	END=141194721;SVTYPE=DEL;SVLEN=-123417204	TR:VR	42:11	27:0
chr8	70039959	r_494_0	G	[chr8:121945295[T	.	PASS	SVTYPE=BND;MATEID=r_494_1	TR:VR	96:7	23:0
chr8	121945295	r_494_1	T	[chr8:70039959[T	.	PASS	SVTYPE=BND;MATEID=r_494_0	TR:VR	96:7	23:0
chrX	78476771	r_553_0	A	A]chrX:78477548]	.	PASS	SVTYPE=BND;MATEID=r_553_1	TR:VR	27:3	17:0
chrX	78477548	r_553_1	G	G]chrX:78476771]	.	PASS	SVTYPE=BND;MATEID=r_553_0	TR:VR	27:3	17:0
chr11	430789	i_132	G	<INS>	.	PASS	END=430789;SVTYPE=INS;SVINSLEN=385;SVINSSEQ=GGGGCGTCCGCCGGGTATCTGGGGGCGTCTGCGGGTGTGTGGGGGCTCCCGCGGGTATCTGGGGGGCTTCTGCGGGGGTGTGGGGCTCCCGCGGGTATCTGGGGGCGTCTGCGGGGTGTGGGGGCTCCCGCGGGTATCTGGGGGCGTCCGCGGGGGTGTGGGGGCTCCCGCGGGTATCTGGGGGGGCTTCTGCGGGGGTGTGGGGGGCTCCCGCGGGTATCTGGGGGGCGTCCGCGGGGGTGTGGGGGCTCCCGCGGGTATCTGGGGGCGCATCTGCGAGGGTGTGGGGGCTCCCGCGGGTATCTGGGGGCGTCCGCGGGGTGTGGGGGCTCCCGCGGGTATCTGGGGGCGTCTGCGGGGGTGTGGGGGGCTCCCGCGGGTATCT	TR:VR	20:3	8:0
chr17	59866123	r_149	A	<DEL>	.	PASS	END=59901902;SVTYPE=DEL;SVLEN=-35779;SVINSLEN=3;SVINSSEQ=TAA	TR:VR	54:4	15:0
chr17_GL000205v2_random	24786	i_508	T	<INS>	.	PASS	END=24787;SVTYPE=INS;SVINSLEN=50;SVINSSEQ=GGAGTTTTATGTGAGGGAAAAACGTTCAGACAATCATAGCAGAATTCTGG	TR:VR	142:8	43:0
chr19	40722959	r_170	T	<DEL>	.	PASS	END=41529354;SVTYPE=DEL;SVLEN=-806395	TR:VR	191:11	24:0
chr2	115801433	r_233_0	G	]chr9:28756759]T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_233_1	TR:VR	122:4	24:0
chr9	28756759	r_233_1	T	T[chr2:115801433[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_233_0	TR:VR	122:4	24:0
chr2	120876486	r_288_0	C	[chr2:120976616[G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_288_1	TR:VR	282:4	24:0
chr2	120976616	r_288_1	G	[chr2:120876486[G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_288_0	TR:VR	282:4	24:0
chr3	63775157	r_357	A	<DUP>	.	PASS	END=63870746;SVTYPE=DUP;SVLEN=95589;SVINSLEN=11;SVINSSEQ=TCTTAGATGGT	TR:VR	81:7	25:0
chr8	100448343	r_515	G	<DUP>	.	PASS	END=111270398;SVTYPE=DUP;SVLEN=10822055;SVINSLEN=17;SVINSSEQ=TTCTCAAAAGCTTTCTT	TR:VR	114:25	21:0
chr8	17785072	r_454	A	<DUP>	.	PASS	END=141440385;SVTYPE=DUP;SVLEN=123655313	TR:VR	41:11	23:0
chr8	70596810	r_495_0	C	[chr8:127167916[A	.	PASS	SVTYPE=BND;MATEID=r_495_1	TR:VR	165:27	34:0
chr8	127167916	r_495_1	A	[chr8:70596810[A	.	PASS	SVTYPE=BND;MATEID=r_495_0	TR:VR	165:27	34:0
chrUn_GL000216v2	50511	d_1581	T	<DEL>	.	Too_small_size;Too_low_VAF	END=50533;SVTYPE=DEL;SVLEN=-22	TR:VR	115:4	34:0
chrUn_KI270442v1	23716	d_1633	G	<DEL>	.	PASS	END=23771;SVTYPE=DEL;SVLEN=-55	TR:VR	113:10	20:0
chr12	126500201	r_74	C	<DEL>	.	PASS	END=126524474;SVTYPE=DEL;SVLEN=-24273;SVINSLEN=116;SVINSSEQ=AACTTTTGTTTTAGGTTTGGGGTACATGTGCAGGCTGGTTTCTTTGAGTAATCAATTTGTGTTTTATATGAATTAAATATTTCTAATATTAATGAAGGGGTCAAAAATATATTTTC	TR:VR	51:6	28:0
chr12	40510607	i_208	A	<INS>	.	PASS	END=40510679;SVTYPE=INS;SVINSLEN=390;SVINSSEQ=AAATTACTTGGTAAATATTCTGTCACATGTATATCGTATGAAGAATATGCAGATTACTATTAGGCATAAAAAGTCCAGTTTACAGCTGGGCATGGTGACTCATGCCTGTAATCCCAGAACTTTGAGAGTCCAAGGCGTGAGGATCACTTAAGCCAAGGAGATTGAGACCAGCCTGGGCGATATGGTGCAACCCTGTCTCTACAAATAATAATAACAATAATAACAAAAATTAGCTGGGCATGGTGGCATGTGCTTGTAGTCCCAGCTACTCGGAAGGCTAAGGCTGGAGGATGGCTTGAGCCCAGGAGGTGGAGGTTGCAGTGAACTAAGATTGTGCCACTATGCTCCAGCCTGGGTAAGAGTGAGACTGTCTGAAAAAAAAAAAATCAC	TR:VR	27:5	10:0
chr15	19816961	r_96_0	T	[chrX:127447702[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_96_1	TR:VR	72:3	33:0
chrX	127447702	r_96_1	T	[chr15:19816961[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_96_0	TR:VR	72:3	33:0
chr17	59867083	i_461	C	<INS>	.	PASS	END=59867211;SVTYPE=INS;SVINSLEN=243;SVINSSEQ=CACGCCCACCAGTTTCAGTTTTTTACCACTTGTATTTGAATCTAGAAAAGCTACTTTTTAATATTCCCATTCTAACTTAAATGATCACTTCATTTGCAAGAAAGTCTTAATGAAATGTCAGATTTTTCTGGCTTTTACTTTTTCTTCATAGCAGAGTTGATGAGACTAAACATAATATCAAGGAATCAATAAATTTAAATAGTAATCTTTAATCACCCAAAGAGCATTATTATTCTTGTGAAT	TR:VR	24:5	8:0
chr19	41052188	r_171	T	<DUP>	.	Too_low_VAF	END=41529346;SVTYPE=DUP;SVLEN=477158;SVINSLEN=14;SVINSSEQ=CTGTCTCCAAAAAA	TR:VR	196:5	20:0
chr2	120888350	r_289_0	C	[chr2:120959244[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_289_1	TR:VR	270:9	29:0
chr2	120959244	r_289_1	T	[chr2:120888350[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_289_0	TR:VR	270:9	29:0
chr22	10722804	d_1152	T	<INS>	.	PASS	END=10722949;SVTYPE=INS;SVINSLEN=165;SVINSSEQ=CCATTCGAGTGTATTCCATTTCATTCCTCTTTAGTCCATTCCATTCCATTCGACTCCATTCCAATCCATTACATTCCATTCGAGTCCATTCCATTTCATTCAAGTCCTTTCCATTCCATTTCATTCGAGTCCATTCCATTCCACTCCTTTCTATTCAATCCAAGT	TR:VR	133:16	55:1
chr5	126562578	i_1252	G	<INS>	.	PASS	END=126562578;SVTYPE=INS;SVINSLEN=244;SVINSSEQ=GTGGCTCATCTGCCCCAGCCTCCCAAGTAGCTGGGACTACAAGCACACGCCACCATGCCCGGCTGTTTTTTTGTATTTCTAGTAGAGACAGGGTTTCACCATATTGGCCAGGCTGGTCCGGAACACTTGACCTCAGGTGATCCGCCCACCTCAGCCTCCCAAAGTGCAGGGATTACAGACATGAGCCACCGTGTTTGGCTCCAATCTGCAGTTCTTTCTTGCTTATTATTTAAGCTGTGCGCAG	TR:VR	48:4	13:0
chr8	100576394	r_516_0	G	G]chr8:103010244]	.	PASS	SVTYPE=BND;MATEID=r_516_1	TR:VR	125:31	29:0
chr8	103010244	r_516_1	G	G]chr8:100576394]	.	PASS	SVTYPE=BND;MATEID=r_516_0	TR:VR	125:31	29:0
chr8	17830114	r_455	G	<DUP>	.	PASS	END=140841864;SVTYPE=DUP;SVLEN=123011750;SVINSLEN=1;SVINSSEQ=T	TR:VR	45:16	21:0
chr8	70600368	r_496_0	T	T]chr8:111796478]	.	PASS	SVTYPE=BND;MATEID=r_496_1	TR:VR	132:33	26:0
chr8	111796478	r_496_1	C	C]chr8:70600368]	.	PASS	SVTYPE=BND;MATEID=r_496_0	TR:VR	132:33	26:0
chr1	144463081	r_20	G	<DUP>	.	Too_low_VAF	END=149104102;SVTYPE=DUP;SVLEN=4641021	TR:VR	90:3	38:0
chr15	19821806	i_373	C	<INS>	.	PASS	END=19821809;SVTYPE=INS;SVINSLEN=59;SVINSSEQ=AATTAAAACTGAAAGTTTTAACTCTGTGAAATGAATGCACACATCACAAAGTAGTTTCT	TR:VR	45:4	14:0
chr19	41538493	d_862	T	<DEL>	.	PASS	END=41543951;SVTYPE=DEL;SVLEN=-5458	TR:VR	107:12	17:0
chr2	120888371	r_290_0	C	C]chr2:120888862]	.	PASS	SVTYPE=BND;MATEID=r_290_1	TR:VR	144:9	14:0
chr2	120888862	r_290_1	A	A]chr2:120888371]	.	PASS	SVTYPE=BND;MATEID=r_290_0	TR:VR	144:9	14:0
chr2	69973103	r_190	C	<DUP>	.	PASS	END=70148058;SVTYPE=DUP;SVLEN=174955	TR:VR	71:10	23:0
chr3	64172643	r_358	C	<DUP>	.	Too_low_VAF	END=64192228;SVTYPE=DUP;SVLEN=19585	TR:VR	83:4	22:0
chr8	100789031	r_517	A	<DUP>	.	PASS	END=143220118;SVTYPE=DUP;SVLEN=42431087	TR:VR	104:28	28:0
chr8	18379859	r_456_0	A	A]chr8:59745007]	.	PASS	SVTYPE=BND;MATEID=r_456_1	TR:VR	62:12	30:0
chr8	59745007	r_456_1	A	A]chr8:18379859]	.	PASS	SVTYPE=BND;MATEID=r_456_0	TR:VR	62:12	30:0
chr1	248945919	i_70	G	<INS>	.	Too_low_VAF	END=248945919;SVTYPE=INS;SVINSLEN=254;SVINSSEQ=GGTTTAGGGGCCAGGGGGCCAGGGGCCAGGGGCCAGGGGGCCAGGCCAGGCCAGGGCCAGGCTCAGGGCCAGGGCCAGGGCCAGGCCAAGGGCCAGGGGCCAGGGCCAGGCCAGGCCAGGCAGGGCCAGGGCCGTGGCCAGCCAGGCCAGGGCCAGGGCCAGGGTCAGGGTCAGGGTCCAGGGTTATGGGCCAGTGTTGCGCAGGGGGTTGGGGTTAGGGTTAGGGCCTAGGGTTGGGAAGGGGTTAGGGTTAG	TR:VR	236:3	101:1
chr11	47594733	r_48	G	<DUP>	.	PASS	END=47748103;SVTYPE=DUP;SVLEN=153370	TR:VR	58:5	33:0
chr12	45490342	r_63	T	<DUP>	.	PASS	END=45636787;SVTYPE=DUP;SVLEN=146445	TR:VR	66:7	20:0
chr17	61174351	d_750	C	<DEL>	.	PASS	END=61174885;SVTYPE=DEL;SVLEN=-534	TR:VR	61:8	7:0
chr19	42079185	d_863	G	<DEL>	.	PASS	END=42079246;SVTYPE=DEL;SVLEN=-61	TR:VR	87:9	18:0
chr2	116020262	r_236	G	<DEL>	.	Too_low_VAF	END=116177495;SVTYPE=DEL;SVLEN=-157233	TR:VR	212:4	35:0
chr2	120892788	r_291_0	C	C]chr4:173932749]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_291_1	TR:VR	160:7	33:0
chr4	173932749	r_291_1	C	C]chr2:120892788]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_291_0	TR:VR	160:7	33:0
chr8	18471600	r_457	G	<DUP>	.	PASS	END=142208238;SVTYPE=DUP;SVLEN=123736638	TR:VR	41:13	30:0
chr10	80249776	r_41	A	<DUP>	.	PASS	END=80550725;SVTYPE=DUP;SVLEN=300949	TR:VR	46:3	25:0
chr19	42079259	r_172_0	A	A]chr19:42079668]	.	PASS	SVTYPE=BND;MATEID=r_172_1	TR:VR	88:9	18:0
chr19	42079668	r_172_1	C	C]chr19:42079259]	.	PASS	SVTYPE=BND;MATEID=r_172_0	TR:VR	88:9	18:0
chr2	116051222	r_237	G	<DUP>	.	Too_low_VAF	END=120953516;SVTYPE=DUP;SVLEN=4902294	TR:VR	240:10	23:0
chr2	120892948	r_292_0	A	[chr4:136595717[AAT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_292_1;SVINSLEN=2;SVINSSEQ=AA	TR:VR	163:8	24:0
chr4	136595717	r_292_1	T	[chr2:120892948[TTT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_292_0;SVINSLEN=2;SVINSSEQ=TT	TR:VR	163:8	24:0
chr8	105147921	d_1535	T	<DEL>	.	Too_small_size	END=105147961;SVTYPE=DEL;SVLEN=-40	TR:VR	49:4	12:0
chr8	18660046	r_458	T	<DEL>	.	PASS	END=76147354;SVTYPE=DEL;SVLEN=-57487308	TR:VR	92:17	26:0
chrX	90325382	r_554_0	T	]chrY:3900131]A	.	PASS	SVTYPE=BND;MATEID=r_554_1	TR:VR	27:6	16:0
chrY	3900131	r_554_1	A	A[chrX:90325382[	.	PASS	SVTYPE=BND;MATEID=r_554_0	TR:VR	27:6	16:0
chr10	84157180	r_42_0	T	[chr11:33953396[A	.	PASS	SVTYPE=BND;MATEID=r_42_1	TR:VR	76:14	33:0
chr11	33953396	r_42_1	A	[chr10:84157180[A	.	PASS	SVTYPE=BND;MATEID=r_42_0	TR:VR	76:14	33:0
chr11	48911732	i_144	C	<INS>	.	PASS	END=48911732;SVTYPE=INS;SVINSLEN=514;SVINSSEQ=TGTCTACTTTTTATGTGAAAATATTTCCTTATCTACCATAGGCCTCAAAGCGCTCCAAATATCCACTTGCAGTTTCTACAAAAAGAATGTTTCAAAAATGCTCTATCAAAAGGAAGGTTCAAATCTGTGAGTTGAATGCACACATAACAAAGGTGTTCCTGAGAATGCTTCTGTCTCATTTGCATGTGAAGATATTCCCCTTTCCATCGAAGGCCTCAAAGCAGTCCCAATGTACACTTGCACATTCTACAAAAAGAGTTTTTCAAAACTGCTCTATCAAAAGGAAGGTTCAACTCTGTGAGCTGAATGCACACATAACAAAGAAGTTTCTGAGAATGACTCTGTCTAGTTTTTATGTGTAGATATTTCCGTTTCCAATGAAGGCCTCAAAGGAGTCCAAATATCCACTTGCATATTCTACAAAAAGATTGTTTAAAAACTGCTCTATCAAAAGGAAGGTTCAAGTCTGTGAGTTGAATGGACACATAAAAAAGTAGTTTCTGAGAATGCTTTT	TR:VR	33:8	14:0
chr19	18441979	i_594	A	<INS>	.	PASS	END=18441979;SVTYPE=INS;SVINSLEN=738;SVINSSEQ=CCTCCCTGCCGCGCGCCCGCCTGACCGCCTTCCTGCCTTCCCGACGCGCGGCCCCAGGCGCGTGCCTCCTGCACACCCTGCAAATGGCCACGCCTCAGCGCCCAGCACACGCAACACCACACGCTGACACCCACACCACACATCGACAAACCACACACCGAGCACACCAACTAGCACATACCACATCGCACACATCCTAACACCACCGCTTCGACACCGCCCGCTGGCGCGCGCGCCGCGCGCAGCACACCCAGCACGCCCTCGCACACCAGCGCGCCACACACATGACCGGTTCCCAACACACCACACACATCCCATCACACACCACGCGCCCCACCACACACATCGGCCCAACACACACCAGCACACCACACACCCAGGTCACACCACACCACACACACCCACACCCACAACACACACCCCACATCCCAACACATACCCCATCCCGCACAATCACGCGCATCCTCACCACACACATCCCCAACACACACCACACCCACACCTGCACACCCCAACACACACCACACACCAACACACCCACACACCCACCCACACACCACACACACACCCACACACCCACTGTCACACCACACCCACACCCCAACACACACCACACCCACACCTACACACCCCAACACACCAAACACCCCCACACACATACACACCCCACTCCACACACCCCACAAACCCACACCACTGTCACACCACACCCACATACACCACACACACCACTTACAC	TR:VR	37:4	16:0
chr19	7837460	r_159_0	T	[chr20:49669048[G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_159_1	TR:VR	68:3	26:0
chr20	49669048	r_159_1	G	[chr19:7837460[G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_159_0	TR:VR	68:3	26:0
chr2	116180332	r_238_0	G	G[chr9:22278195[	.	PASS	SVTYPE=BND;MATEID=r_238_1	TR:VR	131:7	25:0
chr9	22278195	r_238_1	G	]chr2:116180332]G	.	PASS	SVTYPE=BND;MATEID=r_238_0	TR:VR	131:7	25:0
chr2	120897914	r_293_0	T	[chr2:121416427[GATGAAAGACACTGCTGTGACTCTTGT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_293_1;SVINSLEN=26;SVINSSEQ=GATGAAAGACACTGCTGTGACTCTTG	TR:VR	312:5	26:0
chr2	121416427	r_293_1	T	[chr2:120897914[CAAGAGTCACAGCAGTGTCTTTCATCT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_293_0;SVINSLEN=26;SVINSSEQ=CAAGAGTCACAGCAGTGTCTTTCATC	TR:VR	312:5	26:0
chr2	186552748	d_1002	T	<DEL>	.	PASS	END=186553069;SVTYPE=DEL;SVLEN=-321	TR:VR	34:4	6:0
chr20	62242427	r_330_0	T	[chr20:62501564[C	.	PASS	SVTYPE=BND;MATEID=r_330_1	TR:VR	84:11	23:0
chr20	62501564	r_330_1	C	[chr20:62242427[C	.	PASS	SVTYPE=BND;MATEID=r_330_0	TR:VR	84:11	23:0
chr3	195727076	r_379	G	<DEL>	.	Too_low_VAF	END=195746134;SVTYPE=DEL;SVLEN=-19058	TR:VR	85:3	37:0
chr8	19603714	r_459	G	<DEL>	.	PASS	END=140660223;SVTYPE=DEL;SVLEN=-121056509	TR:VR	40:10	23:0
chr8	71901749	d_1530	C	<DEL>	.	PASS	END=71909528;SVTYPE=DEL;SVLEN=-7779	TR:VR	83:6	21:0
chr10	84235476	r_43_0	A	A]chr11:10423853]	.	PASS	SVTYPE=BND;MATEID=r_43_1	TR:VR	63:12	27:0
chr11	10423853	r_43_1	C	C]chr10:84235476]	.	PASS	SVTYPE=BND;MATEID=r_43_0	TR:VR	63:12	27:0
chr17	65081533	r_150_0	C	C[chr19:8917714[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_150_1	TR:VR	71:3	29:0
chr19	8917714	r_150_1	C	]chr17:65081533]C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_150_0	TR:VR	71:3	29:0
chr19	7926083	r_160_0	T	T]chr20:49780711]	.	PASS	SVTYPE=BND;MATEID=r_160_1	TR:VR	69:7	24:0
chr20	49780711	r_160_1	T	T]chr19:7926083]	.	PASS	SVTYPE=BND;MATEID=r_160_0	TR:VR	69:7	24:0
chr2	116385148	r_239_0	G	[chr2:120954139[A	.	PASS	SVTYPE=BND;MATEID=r_239_1	TR:VR	257:16	22:0
chr2	120954139	r_239_1	A	[chr2:116385148[A	.	PASS	SVTYPE=BND;MATEID=r_239_0	TR:VR	257:16	22:0
chr2	120936370	r_294	T	<DUP>	.	PASS	END=120955988;SVTYPE=DUP;SVLEN=19618	TR:VR	223:14	22:0
chr22	43432483	i_990	G	<INS>	.	PASS	END=43432483;SVTYPE=INS;SVINSLEN=483;SVINSSEQ=AGGGAGAGAGAGAAAGGGAGGAGAGAGAGAGAAAGGGAGGAGAGAGAAAGAGAGAGAGAGAGAGAAAGGGAGGAGAGAGAGATAAAGGGAGGAGAGAGAGATAAAGGGAGGAGAGAGAGAGAAAGGGAGGAGAGAGAGATAAAGGGAGGGAGAGAGAGAGAGAGAAAGGGAGGGAGAGAGAAAGAAAGGGAGAGAGAGAAAGGGAGAGAGAGAGAAAGGGAGAGAGAGAGAAAGGGAGGGAGAGAGAGAAAGGGAGGGAGAGAGAGAGAGAAAAAGGGAGAGAGAGAGAGAAAGGGAGGGAGAGAGAGAAAGGGAGGGGAGAGAGAGAGAAAGGGAGGGAGAGAGAGAGATAAAGGGAGGAGAGAGAGAGAAAGGGAGAGAGAGAGAGAAAGGGAGGGAGAGAGAGAGAGAAAGGGAGGAGAGAGAGAGAGAAAGGGAGAGGAGAGAGAGATAAAGGGAGGAGAGAGAGAAAGGGAGAGAGAG	TR:VR	58:6	22:0
chr3	195746512	r_380	T	<DEL>	.	PASS	END=195749161;SVTYPE=DEL;SVLEN=-2649;SVINSLEN=29;SVINSSEQ=TAATTATAATTATTAAATAATTAAATAAT	TR:VR	60:3	19:0
chr3	76540143	r_359_0	A	A]chr3:141273633]	.	PASS	SVTYPE=BND;MATEID=r_359_1	TR:VR	77:7	25:0
chr3	141273633	r_359_1	T	T]chr3:76540143]	.	PASS	SVTYPE=BND;MATEID=r_359_0	TR:VR	77:7	25:0
chr8	118303379	r_518_0	A	ATATCACCACAGGATTCCATTCCAGAACTGTCTTCTATCTG]chr8:119183261]	.	PASS	SVTYPE=BND;MATEID=r_518_1;SVINSLEN=40;SVINSSEQ=TATCACCACAGGATTCCATTCCAGAACTGTCTTCTATCTG	TR:VR	125:13	28:0
chr8	119183261	r_518_1	A	ACAGATAGAAGACAGTTCTGGAATGGAATCCTGTGGTGATA]chr8:118303379]	.	PASS	SVTYPE=BND;MATEID=r_518_0;SVINSLEN=40;SVINSSEQ=CAGATAGAAGACAGTTCTGGAATGGAATCCTGTGGTGATA	TR:VR	125:13	28:0
chr8	19900878	r_460	G	<DUP>	.	PASS	END=77119976;SVTYPE=DUP;SVLEN=57219098	TR:VR	65:15	23:0
chr8	72659042	r_497	G	<DUP>	.	PASS	END=79436079;SVTYPE=DUP;SVLEN=6777037	TR:VR	103:17	25:0
chr1	2649072	i_3	C	<INS>	.	PASS	END=2649073;SVTYPE=INS;SVINSLEN=125;SVINSSEQ=AGAGCAGCACCACAGCAGGTGAGCATCTGACAGTCTGGAACAGAGCACCCACACCCCCAGGTGGGCATCTGACAGCCTGGAGCAGCACCCACACCCCCAGGTGAGCATCTGAGAGTCTGGAGCAG	TR:VR	81:32	17:0
chr11	48912413	i_146	T	<INS>	.	PASS	END=48912414;SVTYPE=INS;SVINSLEN=173;SVINSSEQ=TCAGTCTAGTTTTTATGTGAAGGTATTCCTGTTTCCATCAAAGGCCTCAAAGCCGTCCAAATATTCAAATGCAGATTCTGCAAAAACAGTTTTTCAAAACTACTCTATCAAAAGGAAGATTCAAATCTGTGAGTTGAATGTCATCATCATAAAGAAATTTTGGAGAATGCTTC	TR:VR	32:5	16:0
chr17	1250244	i_443	C	<INS>	.	PASS	END=1250244;SVTYPE=INS;SVINSLEN=218;SVINSSEQ=CCTTGCTGGGGGCTGTGGAGGGAAGATCATGGGGACCCTTGCTGGGGACTGTGGAGGGAAGATCATGGGGACCCTTGCTGGGGGCTGTGGAGGGAAGATCATGGGGACCCTTGCTGGGGGCTGTGGAGGGAAGATCATGGGGACCCTTGCTGGGGACTGTGGAGGGAAGATCATGGGGACCCTTGCTGGGGGCTGTGGAGGGAAGATCATGGGGACTC	TR:VR	18:3	12:0
chr2	116442184	r_240_0	A	[chr2:116450650[A	.	PASS	SVTYPE=BND;MATEID=r_240_1	TR:VR	130:13	14:0
chr2	116450650	r_240_1	A	[chr2:116442184[A	.	PASS	SVTYPE=BND;MATEID=r_240_0	TR:VR	130:13	14:0
chr2	120985181	r_295_0	T	[chr2:122011908[G	.	PASS	SVTYPE=BND;MATEID=r_295_1	TR:VR	333:41	19:0
chr2	122011908	r_295_1	G	[chr2:120985181[G	.	PASS	SVTYPE=BND;MATEID=r_295_0	TR:VR	333:41	19:0
chr21	45345513	i_934	G	<INS>	.	PASS	END=45345513;SVTYPE=INS;SVINSLEN=154;SVINSSEQ=AATTGGTTAGACGTCCCTGGCGGGGTGTGTCGCTTCCCACTGGATTTTCAACACAGGGAATTGGTTAGACGTCCCTGGCGGGGTGTGTCGCTTCCCACTGGATTTTCAACGCAGGGAATTGGTTACACGTCCCTGGCGGGGTGTGTCGCTTCCA	TR:VR	45:4	14:0
chr3	77129364	r_360	T	<DUP>	.	PASS	END=130793481;SVTYPE=DUP;SVLEN=53664117	TR:VR	73:11	19:0
chr8	118303425	r_519_0	A	[chr8:120472049[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_519_1	TR:VR	124:5	33:0
chr8	120472049	r_519_1	T	[chr8:118303425[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_519_0	TR:VR	124:5	33:0
chr8	20277869	r_461_0	A	[chr8:81960950[C	.	PASS	SVTYPE=BND;MATEID=r_461_1	TR:VR	160:37	16:0
chr8	81960950	r_461_1	C	[chr8:20277869[C	.	PASS	SVTYPE=BND;MATEID=r_461_0	TR:VR	160:37	16:0
chr8	72841069	r_498_0	T	T]chr8:142412105]	.	PASS	SVTYPE=BND;MATEID=r_498_1	TR:VR	95:41	25:0
chr8	142412105	r_498_1	A	A]chr8:72841069]	.	PASS	SVTYPE=BND;MATEID=r_498_0	TR:VR	95:41	25:0
chr16	34584905	d_634	T	<INS>	.	Too_low_VAF	END=34585034;SVTYPE=INS;SVINSLEN=129;SVINSSEQ=CATCGAATGAACTCGAATGGAATCATCATGGAATGGAATCGAATAGAATCATTGAATGGACTCGAATGTAGTGATCAAAAGGACTCGAAAGGCATTAACGAATGGACTCGAATGGAATCATTGAATGGA	TR:VR	291:3	98:1
chr2	116443012	r_241	A	<DEL>	.	Too_low_VAF	END=121091186;SVTYPE=DEL;SVLEN=-4648174	TR:VR	265:13	21:0
chr2	120998310	r_296_0	C	C]chr2:121320564]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_296_1	TR:VR	317:4	28:0
chr2	121320564	r_296_1	G	G]chr2:120998310]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_296_0	TR:VR	317:4	28:0
chr20	63051204	i_836	T	<INS>	.	PASS	END=63051204;SVTYPE=INS;SVINSLEN=275;SVINSSEQ=CTCCCTGGTGCAGAGAATCATGCTCTGTAGTGTCCTCCCCAGTGCAGAGAATCATGCTCTGTGGTGTCCTCACCCCGGTGCAGAGAATCATGCTCTGTAGTGTCCTCCCGGTGCAGAGAATCATGCTCTGTAGTGTCCTCCTCTCCGGTGCAGAATCATGCTTTGTAGTGTCCTGCCCCAGTGCAGAGAATCATGCTCTGCAGTGTGTCCTCCCCCGGTGCAGAGAATCATGCTCTGTAGTGTCCTCCTGGTGCAGAAAATCATGCTCAGTGTCC	TR:VR	45:4	12:0
chr3	77129636	r_361	T	<DEL>	.	PASS	END=141399197;SVTYPE=DEL;SVLEN=-64269561	TR:VR	74:11	29:0
chr5	13419021	r_402_0	A	[chrY:9941132[G	.	PASS	SVTYPE=BND;MATEID=r_402_1	TR:VR	36:5	24:0
chrY	9941132	r_402_1	G	[chr5:13419021[G	.	PASS	SVTYPE=BND;MATEID=r_402_0	TR:VR	36:5	24:0
chr6	47386842	r_416	C	<DUP>	.	PASS	END=47639495;SVTYPE=DUP;SVLEN=252653	TR:VR	59:8	26:0
chr8	118354953	r_520	A	<DEL>	.	PASS	END=119183275;SVTYPE=DEL;SVLEN=-828322;SVINSLEN=1;SVINSSEQ=T	TR:VR	110:9	20:0
chr8	20282407	r_462_0	A	A]chr8:129394488]	.	PASS	SVTYPE=BND;MATEID=r_462_1	TR:VR	117:40	23:0
chr8	129394488	r_462_1	A	A]chr8:20282407]	.	PASS	SVTYPE=BND;MATEID=r_462_0	TR:VR	117:40	23:0
chr8	72883370	r_499	G	<DUP>	.	PASS	END=120838973;SVTYPE=DUP;SVLEN=47955603	TR:VR	90:13	30:0
chrX	99229169	i_1541	G	<INS>	.	PASS	END=99229169;SVTYPE=INS;SVINSLEN=1601;SVINSSEQ=TTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTGTTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAATAACAATAAAATGAGATAAAATCTACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	27:10	9:0