##fileformat=VCFv4.3 ##fileDate=20230117 ##source=nanomonsv-0.5.0 ##reference=/projects/jfan_prj/jfan_prj/Nanopore_Testing/2021_nanopore_sv_testing/scratch/depth_testing/POG/COLO829/hg38_no_alt.fa ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##ALT= ##ALT= ##ALT= ##FORMAT= ##FORMAT= #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT TUMOR CONTROL chr1 100364846 r_33 A . PASS END=100395977;SVTYPE=DUP;SVLEN=31131;SVINSLEN=3;SVINSSEQ=TTC TR:VR 68:8 23:0 chr1 222939409 r_84 A . PASS END=222944019;SVTYPE=DUP;SVLEN=4610 TR:VR 72:4 17:0 chr10 29356433 r_105 C . Too_low_VAF END=29376870;SVTYPE=DUP;SVLEN=20437;SVINSLEN=32;SVINSSEQ=GGTGTGATATGGTGAGATATGAGAGATGGGGG TR:VR 95:4 33:0 chr12 104050181 r_222_0 C [chr12:104050409[T . PASS SVTYPE=BND;MATEID=r_222_1 TR:VR 41:9 21:0 chr12 104050409 r_222_1 T [chr12:104050181[T . PASS SVTYPE=BND;MATEID=r_222_0 TR:VR 41:9 21:0 chr12 21684273 r_194 C . PASS END=21765097;SVTYPE=DUP;SVLEN=80824 TR:VR 76:7 28:0 chr14 38410996 d_441 C . PASS END=38411088;SVTYPE=DEL;SVLEN=-92 TR:VR 46:8 22:0 chr16 24953608 r_328 A . PASS END=24971625;SVTYPE=DUP;SVLEN=18017 TR:VR 78:14 30:0 chr17 74921984 r_405 G . PASS END=74925263;SVTYPE=DUP;SVLEN=3279 TR:VR 65:4 15:0 chr20 4921169 d_1054 C . Too_small_size END=4921212;SVTYPE=DEL;SVLEN=-43 TR:VR 46:5 18:0 chr21 7248796 d_1113 A . Too_low_VAF END=7248893;SVTYPE=INS;SVINSLEN=97;SVINSSEQ=AAGAAAGATTGAACTCTGTCAGATGAACGCACACATCACAAAGAAGTTTCACAGAATTCTTTTGTCTAGTTTTTATGTGAAGATATTTCCTTTCCCA TR:VR 176:6 88:1 chr3 42342451 r_550_0 C C[chr4:9384760[ . PASS SVTYPE=BND;MATEID=r_550_1 TR:VR 63:6 35:0 chr4 9384760 r_550_1 A ]chr3:42342451]A . PASS SVTYPE=BND;MATEID=r_550_0 TR:VR 63:6 35:0 chr5 91718675 r_648 G . PASS END=91736589;SVTYPE=DUP;SVLEN=17914;SVINSLEN=11;SVINSSEQ=TTTAGAAATAT TR:VR 61:10 29:0 chr7 19588918 d_1446 C . PASS END=19589037;SVTYPE=DEL;SVLEN=-119 TR:VR 43:22 18:0 chr8 29458391 d_1492 A . PASS END=29458445;SVTYPE=DEL;SVLEN=-54 TR:VR 24:14 20:0 chrY 56840221 d_1825 T . Too_low_VAF END=56842008;SVTYPE=DEL;SVLEN=-1787;SVINSLEN=15;SVINSSEQ=GCCTACATGTGGGCT TR:VR 361:5 224:1 chr1 100368842 d_26 T . PASS END=100369871;SVTYPE=DEL;SVLEN=-1029 TR:VR 43:17 15:0 chr1 159626745 r_56 T . PASS END=159649395;SVTYPE=DUP;SVLEN=22650 TR:VR 93:10 40:0 chr10 29937221 r_106_0 A [chr4:157806373[CC . PASS SVTYPE=BND;MATEID=r_106_1;SVINSLEN=1;SVINSSEQ=C TR:VR 113:21 40:0 chr4 157806373 r_106_1 C [chr10:29937221[GC . PASS SVTYPE=BND;MATEID=r_106_0;SVINSLEN=1;SVINSSEQ=G TR:VR 113:21 40:0 chr11 39214230 r_145 A . PASS END=39218409;SVTYPE=DUP;SVLEN=4179 TR:VR 41:4 26:0 chr13 73869619 r_249 A . PASS END=73881807;SVTYPE=DUP;SVLEN=12188 TR:VR 53:3 29:0 chr16 29468349 d_660 T . Too_small_size END=29468386;SVTYPE=DEL;SVLEN=-37 TR:VR 46:4 22:0 chr17 46261601 i_447 T . Too_low_VAF END=46261601;SVTYPE=INS;SVINSLEN=616;SVINSSEQ=AAGGTTTCACCATGTTGACCAGGCCTGACCTCGACCTCATGATCCGCCCGCCCTGGCCTCCCAAAAGTGCTGGAATTACAGGCATGAGCCACTGTGCCCGGCCTTATTTATTTATTTATTTATTTAGAGACAGAGTTTCCTGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCCGATCACCTGAGGTCGGGAGTTCGAGACCAGCCTGACCAACATGGAGAAACCCCGTCTCTCCTAAAAATACAAAATTAGCCGGGCGTGGTGGCACGCGCCTGTAATCCCATCTACTATGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGTGGCAGAGGTTGGGGCGAGTGAAGATCGTGCCATTGCACTCCAGCTTGGGTGACAAGAGGGAAACTCCGTCTCAAAACAACAACAACAAAAGATAGAGAGACAGTTTCCCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGCGATCTCAGCTCACCGCAATCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGCAGCTGGGATTATAGGCATGCGCCAGCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACG TR:VR 127:3 36:0 chr17 75213785 r_406 C . PASS END=75241915;SVTYPE=DUP;SVLEN=28130 TR:VR 135:11 38:0 chr19 42308697 d_872 C . Too_small_size END=42308734;SVTYPE=DEL;SVLEN=-37 TR:VR 33:17 26:0 chr2 116359520 r_475 A . PASS END=116363140;SVTYPE=DUP;SVLEN=3620 TR:VR 42:4 16:0 chr2 42810659 r_450 G . PASS END=42820846;SVTYPE=DUP;SVLEN=10187 TR:VR 56:14 20:0 chr3 43594695 d_1193 T . PASS END=43594772;SVTYPE=DEL;SVLEN=-77 TR:VR 26:16 17:0 chr5 92549944 d_1355 T . PASS END=92550236;SVTYPE=DEL;SVLEN=-292 TR:VR 32:5 17:0 chr8 101507477 d_1531 T . PASS END=101507722;SVTYPE=DEL;SVLEN=-245;SVINSLEN=2;SVINSSEQ=TT TR:VR 92:9 19:0 chr8 29655288 d_1493 A . PASS END=29655335;SVTYPE=DEL;SVLEN=-47 TR:VR 21:9 18:0 chr8 61202587 r_750_0 G [chr9:12556897[T . PASS SVTYPE=BND;MATEID=r_750_1 TR:VR 141:16 36:0 chr9 12556897 r_750_1 T [chr8:61202587[T . PASS SVTYPE=BND;MATEID=r_750_0 TR:VR 141:16 36:0 chr9 134075676 r_817 G . PASS END=134095508;SVTYPE=DUP;SVLEN=19832 TR:VR 55:4 34:0 chrX 154455953 r_834 T . PASS END=154457047;SVTYPE=DUP;SVLEN=1094 TR:VR 23:5 19:0 chr10 116195984 r_134_0 T [chr5:28050863[G . PASS SVTYPE=BND;MATEID=r_134_1 TR:VR 83:8 50:0 chr5 28050863 r_134_1 G [chr10:116195984[G . PASS SVTYPE=BND;MATEID=r_134_0 TR:VR 83:8 50:0 chr10 29937360 r_107_0 C C[chr19:32871366[ . PASS SVTYPE=BND;MATEID=r_107_1 TR:VR 106:21 27:0 chr19 32871366 r_107_1 A ]chr10:29937360]A . PASS SVTYPE=BND;MATEID=r_107_0 TR:VR 106:21 27:0 chr11 42490184 r_146 C . PASS END=42517266;SVTYPE=DUP;SVLEN=27082 TR:VR 69:10 30:0 chr12 104924775 r_224 C . Too_low_VAF END=116147757;SVTYPE=DEL;SVLEN=-11222982 TR:VR 91:4 45:0 chr12 25337214 r_195 A . PASS END=25364565;SVTYPE=DUP;SVLEN=27351 TR:VR 83:6 33:0 chr13 82690548 d_416 T . Too_small_size END=82690585;SVTYPE=DEL;SVLEN=-37 TR:VR 37:8 16:0 chr14_GL000225v1_random 104704 d_584 G . Too_low_VAF END=104804;SVTYPE=DEL;SVLEN=-100 TR:VR 211:3 148:1 chr16 30172826 i_392 A . PASS END=30172851;SVTYPE=INS;SVINSLEN=145;SVINSSEQ=GAAGAAGAAGAAGAAGGAAACCTAGTTCAAATTTTGATAAGGAAAAAAAAAGAGAGAATTTGTTGCTTCACATAATGGAAAGGATCTAGCTTCTCAAGTGCGGCTGGACCCAGGGCGGGCTCCGGGAGTCTGTCTTGTTCTCTCC TR:VR 27:3 28:0 chr17 46546197 r_372_0 T T[chr19:19146484[ . PASS SVTYPE=BND;MATEID=r_372_1 TR:VR 123:7 76:0 chr19 19146484 r_372_1 G ]chr17:46546197]G . PASS SVTYPE=BND;MATEID=r_372_0 TR:VR 123:7 76:0 chr17 75538446 r_407 C . PASS END=77645800;SVTYPE=DUP;SVLEN=2107354 TR:VR 158:16 41:0 chr19 42720821 r_432 T . PASS END=42739690;SVTYPE=DUP;SVLEN=18869 TR:VR 60:6 37:0 chr2 43477649 r_451 A . PASS END=43629736;SVTYPE=DUP;SVLEN=152087 TR:VR 85:9 31:0 chr20 50710034 r_522 C . PASS END=50732134;SVTYPE=DUP;SVLEN=22100 TR:VR 134:10 32:0 chr3 46054453 r_551_0 C CTTTGGCCTTTTTTGGCTTTCAACAGTTTTTATTGCAGGATATTCTGTCTTTCATTATAAGCCTAAGTGAACCCCAAAATGTCCCTTTGAAGATTCTACAAAAACAATGTTTACAAACTGCTGAATGTAAAGAAAGGTTTAACTCTCTGAGGTGAATCCACACATTACAAACCC[chr8:46493738[ . PASS SVTYPE=BND;MATEID=r_551_1;SVINSLEN=173;SVINSSEQ=TTTGGCCTTTTTTGGCTTTCAACAGTTTTTATTGCAGGATATTCTGTCTTTCATTATAAGCCTAAGTGAACCCCAAAATGTCCCTTTGAAGATTCTACAAAAACAATGTTTACAAACTGCTGAATGTAAAGAAAGGTTTAACTCTCTGAGGTGAATCCACACATTACAAACCC TR:VR 89:5 43:1 chr8 46493738 r_551_1 G ]chr3:46054453]GGGTTTGTAATGTGTGGATTCACCTCAGAGAGTTAAACCTTTCTTTACATTCAGCAGTTTGTAAACATTGTTTTTGTAGAATCTTCAAAGGGACATTTTGGGGTTCACTTAGGCTTATAATGAAAGACAGAATATCCTGCAATAAAAACTGTTGAAAGCCAAAAAAGGCCAAAG . PASS SVTYPE=BND;MATEID=r_551_0;SVINSLEN=173;SVINSSEQ=GGGTTTGTAATGTGTGGATTCACCTCAGAGAGTTAAACCTTTCTTTACATTCAGCAGTTTGTAAACATTGTTTTTGTAGAATCTTCAAAGGGACATTTTGGGGTTCACTTAGGCTTATAATGAAAGACAGAATATCCTGCAATAAAAACTGTTGAAAGCCAAAAAAGGCCAAA TR:VR 89:5 43:1 chr4 137448540 d_1290 T . Too_small_size END=137448586;SVTYPE=DEL;SVLEN=-46 TR:VR 30:14 14:0 chr4 49280146 d_1257 A . Too_low_VAF END=49280231;SVTYPE=INS;SVINSLEN=88;SVINSSEQ=GACTGGGGAGTAACTCAGTGAAACTGGTGAGTTTGGTGGTGACTCCAGCTGGGTGCCTGGAACTGACTCCAACTGAAATCTGGGTGTG TR:VR 598:4 437:0 chr5 111627842 r_651 A . PASS END=111629411;SVTYPE=DUP;SVLEN=1569 TR:VR 27:4 29:0 chr5 93276358 r_649 T . PASS END=129879536;SVTYPE=DEL;SVLEN=-36603178 TR:VR 62:8 41:0 chrX 155793385 d_1764 G . Too_small_size END=155793421;SVTYPE=DEL;SVLEN=-36 TR:VR 30:12 12:0 chr1 101258746 r_35 A . PASS END=101274710;SVTYPE=DUP;SVLEN=15964 TR:VR 53:8 25:0 chr1 161093141 r_57 G . PASS END=229617590;SVTYPE=DUP;SVLEN=68524449 TR:VR 100:17 34:0 chr10 116196182 r_135_0 T T[chr12:55930999[ . PASS SVTYPE=BND;MATEID=r_135_1 TR:VR 95:7 45:0 chr12 55930999 r_135_1 T ]chr10:116196182]T . PASS SVTYPE=BND;MATEID=r_135_0 TR:VR 95:7 45:0 chr11 44678564 r_147 C . PASS END=44859970;SVTYPE=DUP;SVLEN=181406 TR:VR 72:9 43:0 chr12 105073865 r_225 A . Too_low_VAF END=105086852;SVTYPE=DUP;SVLEN=12987 TR:VR 82:3 29:0 chr16 31885895 r_329 C . PASS END=31907041;SVTYPE=DUP;SVLEN=21146 TR:VR 77:6 39:0 chr17 46731652 r_373_0 A ]chr2:233630795]G . PASS SVTYPE=BND;MATEID=r_373_1 TR:VR 74:7 39:0 chr2 233630795 r_373_1 G G[chr17:46731652[ . PASS SVTYPE=BND;MATEID=r_373_0 TR:VR 74:7 39:0 chr17 76065956 r_408 T . Too_low_VAF END=76075925;SVTYPE=DUP;SVLEN=9969 TR:VR 123:3 25:0 chr19 43209806 r_433 T . PASS END=43249963;SVTYPE=DUP;SVLEN=40157 TR:VR 71:7 35:0 chr2 46870024 r_452_0 T TCTAATTCAGTTAGTGTAGTATC[chr4:39864618[ . PASS SVTYPE=BND;MATEID=r_452_1;SVINSLEN=22;SVINSSEQ=CTAATTCAGTTAGTGTAGTATC TR:VR 83:11 22:0 chr4 39864618 r_452_1 A ]chr2:46870024]GATACTACACTAACTGAATTAGA . PASS SVTYPE=BND;MATEID=r_452_0;SVINSLEN=22;SVINSSEQ=GATACTACACTAACTGAATTAG TR:VR 83:11 22:0 chr20 50727339 r_523 A . PASS END=50752373;SVTYPE=DUP;SVLEN=25034 TR:VR 135:17 33:0 chr3 121331304 r_570 C . PASS END=121337909;SVTYPE=DUP;SVLEN=6605 TR:VR 52:8 32:0 chr3 4737911 r_545 G . PASS END=4783029;SVTYPE=DUP;SVLEN=45118 TR:VR 76:13 28:0 chr6 6428198 d_1383 T . Too_small_size END=6428234;SVTYPE=DEL;SVLEN=-36 TR:VR 31:10 19:0 chr7 21912268 d_1447 C . PASS END=21912318;SVTYPE=DEL;SVLEN=-50 TR:VR 52:27 20:0 chr8 101704746 r_765 C . Too_low_VAF END=101712637;SVTYPE=DUP;SVLEN=7891;SVINSLEN=10;SVINSSEQ=AATTTTGTTT TR:VR 132:3 27:0 chrUn_KI270538v1 58079 d_1705 G . PASS END=58181;SVTYPE=DEL;SVLEN=-102;SVINSLEN=101;SVINSSEQ=CAGTTTCTGAGAATGCTTCTGTCTAGTTTGTGTGTGAAGATAGTTCCTTTCCCATCATAGGCCTCTAATCGATCTAGATATCCACTTGCAAATAATACAAA TR:VR 45:4 17:0 chr1 16544084 r_5_0 C [chr1:16731348[G . Too_low_VAF SVTYPE=BND;MATEID=r_5_1 TR:VR 172:3 103:0 chr1 16731348 r_5_1 G [chr1:16544084[G . Too_low_VAF SVTYPE=BND;MATEID=r_5_0 TR:VR 172:3 103:0 chr1 2680361 d_8 G . Too_low_VAF END=2680503;SVTYPE=INS;SVINSLEN=227;SVINSSEQ=ACTGGAACAGCACCGACACCCTCAGGTGAGCATCTCGACAGCCTGGAACAGCACCCACACCCCAGGAGAGCATCTGACAGCCTGGAAAAGGGGCACCCACACACCCAGGTGAGCATCTGACAGCCTGGAACAGCACCCTGCACCCCCAGGTGCGCACGTGACAGCCTGGAACAGCACCCACACACCCAGGCGAGCATCGGACAGCCTGGAGCAGCACCCACACACCC TR:VR 138:6 89:1 chr10 34566585 r_109 T . PASS END=34641579;SVTYPE=DEL;SVLEN=-74994 TR:VR 101:10 41:0 chr10 72418438 d_292 C . Too_small_size END=72418477;SVTYPE=DEL;SVLEN=-39 TR:VR 31:14 17:0 chr11 4560712 d_312 G . PASS END=4562247;SVTYPE=DEL;SVLEN=-1535;SVINSLEN=1;SVINSSEQ=G TR:VR 26:8 26:0 chr12 107544986 d_371 A . PASS END=107545044;SVTYPE=DEL;SVLEN=-58 TR:VR 49:9 24:0 chr13 89730713 r_250_0 T ]chr2:121100372]C . PASS SVTYPE=BND;MATEID=r_250_1 TR:VR 73:7 43:0 chr2 121100372 r_250_1 C C[chr13:89730713[ . PASS SVTYPE=BND;MATEID=r_250_0 TR:VR 73:7 43:0 chr16 3282878 r_322_0 C C]chr3:161967404] . PASS SVTYPE=BND;MATEID=r_322_1 TR:VR 75:8 22:0 chr3 161967404 r_322_1 C C]chr16:3282878] . PASS SVTYPE=BND;MATEID=r_322_0 TR:VR 75:8 22:0 chr17 16118517 d_761 A . PASS END=16118598;SVTYPE=DEL;SVLEN=-81 TR:VR 44:6 14:0 chr17 46738410 r_374_0 A ]chr20:53642055]C . PASS SVTYPE=BND;MATEID=r_374_1 TR:VR 98:6 37:0 chr20 53642055 r_374_1 C C[chr17:46738410[ . PASS SVTYPE=BND;MATEID=r_374_0 TR:VR 98:6 37:0 chr19 433790 i_550 T . PASS END=433790;SVTYPE=INS;SVINSLEN=438;SVINSSEQ=GGCGCTTCATCGTGAGTGAGATAGTGAGTGAGAGATAAGAGGAGGCCGGGCAGATACACGGCGCCCCATTGTGAGCCTGTGATTGAGTGAGTGAGTGAGATCCTGAGTGAGATCATGAGTGAGTGAGATCATGAGTGAGATCATGAGTGAGTGAGATCATGAGTGAGTGAGATCGTGACTGAGATCATGAGTCTGTGAGTGAGATCATGAGTGAGTGAGATCATGAGATCGTGAGTGAGATGATGAGTCTGAGTGAGATCGTGAGTCTGTGAGTGAGATAGTGAGTGAGACTGAGTGAGATCATGAGTCTGTGAGATAGTGAGCAAGTGAGTGAGATCGTGAGTCTGTGAGTGAGTGAAATCATGAGTGAGATCGTGAGCCTGTGAGATTGTGAGTGAGATTGTGAGTCTGTGAGTAAGTGAAATCATGAGTGAGTGA TR:VR 28:3 19:0 chr2 120556302 r_476 T . PASS END=122134835;SVTYPE=DUP;SVLEN=1578533 TR:VR 61:9 37:0 chr2 48848395 r_453 C . PASS END=48857689;SVTYPE=DUP;SVLEN=9294 TR:VR 50:3 22:0 chr20 5096590 r_511 T . PASS END=5119884;SVTYPE=DUP;SVLEN=23294;SVINSLEN=6;SVINSSEQ=TACCTA TR:VR 74:14 42:0 chr4 138889507 d_1291 A . Too_small_size END=138889552;SVTYPE=DEL;SVLEN=-45;SVINSLEN=1;SVINSSEQ=G TR:VR 31:7 18:0 chr8 101987266 r_766 G . Too_low_VAF END=101993578;SVTYPE=DUP;SVLEN=6312 TR:VR 128:4 23:0 chr1 16623750 r_6 G . PASS END=16629021;SVTYPE=DUP;SVLEN=5271 TR:VR 115:6 92:0 chr1 224013873 d_215 T . PASS END=224013959;SVTYPE=DEL;SVLEN=-86 TR:VR 89:7 27:0 chr1 2935220 r_0_0 C ]chr17:66138288]G . Too_low_VAF SVTYPE=BND;MATEID=r_0_1 TR:VR 87:3 41:0 chr17 66138288 r_0_1 G G[chr1:2935220[ . Too_low_VAF SVTYPE=BND;MATEID=r_0_0 TR:VR 87:3 41:0 chr10 35998257 d_257 A . PASS END=35998308;SVTYPE=DEL;SVLEN=-51 TR:VR 74:27 12:0 chr10 73173590 d_293 G . Too_small_size END=73173634;SVTYPE=DEL;SVLEN=-44 TR:VR 42:11 24:0 chr12 29769873 d_356 C . Too_small_size END=29769910;SVTYPE=DEL;SVLEN=-37 TR:VR 36:9 17:0 chr13 89730906 r_251_0 A A]chr17:47769626] . PASS SVTYPE=BND;MATEID=r_251_1 TR:VR 83:7 36:0 chr17 47769626 r_251_1 A A]chr13:89730906] . PASS SVTYPE=BND;MATEID=r_251_0 TR:VR 83:7 36:0 chr16 48570209 r_333 T . PASS END=48579617;SVTYPE=DUP;SVLEN=9408 TR:VR 52:6 38:0 chr17 16162692 r_355_0 G [chr20:25756130[AATATTTAAGTAAATATTTCTTATG . Too_low_VAF SVTYPE=BND;MATEID=r_355_1;SVINSLEN=24;SVINSSEQ=AATATTTAAGTAAATATTTCTTAT TR:VR 136:3 78:0 chr20 25756130 r_355_1 G [chr17:16162692[ATAAGAAATATTTACTTAAATATTG . Too_low_VAF SVTYPE=BND;MATEID=r_355_0;SVINSLEN=24;SVINSSEQ=ATAAGAAATATTTACTTAAATATT TR:VR 136:3 78:0 chr17 46767095 r_375_0 G G[chrX:51606787[ . PASS SVTYPE=BND;MATEID=r_375_1 TR:VR 77:5 49:0 chrX 51606787 r_375_1 A ]chr17:46767095]A . PASS SVTYPE=BND;MATEID=r_375_0 TR:VR 77:5 49:0 chr18 79694308 i_535 C . PASS END=79694308;SVTYPE=INS;SVINSLEN=192;SVINSSEQ=GGGGGTGGGGTGGTCGGAGCAGCCCAGCTGGGACGGGAGTGTGGGGGTTGCGAGCTCCTAGGGACACTGAGTGCCGGGCAGCTCTCGTGTCCGCGGGGCGCGGTGGTCGGAGCAGCCCGGCTGGGATGGGAGTGTGGGGGCTACAGGCACCTAGGGGTGGGCGCTGAGTGCTGGGCGGTCTCATGTCCACGG TR:VR 41:3 19:0 chr2 208287267 r_501 T . PASS END=208301669;SVTYPE=DUP;SVLEN=14402 TR:VR 52:9 29:0 chr2 50020350 r_454 T . PASS END=50045956;SVTYPE=DUP;SVLEN=25606 TR:VR 58:9 33:0 chr20 51192528 r_524 C . PASS END=51216311;SVTYPE=DUP;SVLEN=23783 TR:VR 101:6 37:0 chr4 140407032 r_608 T . PASS END=140425443;SVTYPE=DUP;SVLEN=18411;SVINSLEN=2;SVINSSEQ=AA TR:VR 70:11 29:0 chr5 114846864 i_1032 A . PASS END=114846864;SVTYPE=INS;SVINSLEN=300;SVINSSEQ=GGAGCACCCAGATTCATAAAGCAAGTACTTAGAGACCAAAAAAGAGACACAGACTTCCACACAATAATAGTGGGAGATTTTAACACCCCACTGACAATATTAGACAGATTATTGGGACAGAAAATTAACAAAGATATTCAGGACTGGAACTCAGCACTGGATCAAGCAGACCTGATAGACATTTACAGAACTCTCCACCCAAAAGCAACAGAATATACATTCTTCCTATTGCTACACAGCATTTACTCCAACATTGGTCACATGATTGAAAGTAAAACACTCAGCAAATGCAAAAAACTG TR:VR 29:14 18:0 chr5 20005994 r_626 T . PASS END=20845496;SVTYPE=DUP;SVLEN=839502 TR:VR 89:7 52:0 chr6 64452964 i_1087 C . PASS END=64452965;SVTYPE=INS;SVINSLEN=51;SVINSSEQ=CTTGCCCAACACCAAAAACAACACCAAAAACAACACCAAAAACAACACCAA TR:VR 38:13 22:0 chr8 102798919 d_1532 T . PASS END=102798972;SVTYPE=DEL;SVLEN=-53 TR:VR 93:22 18:0 chr1 167553514 r_58_0 C C[chr13:95393250[ . PASS SVTYPE=BND;MATEID=r_58_1 TR:VR 93:7 54:0 chr13 95393250 r_58_1 G ]chr1:167553514]G . PASS SVTYPE=BND;MATEID=r_58_0 TR:VR 93:7 54:0 chr1 225539512 r_85 T . PASS END=225560907;SVTYPE=DUP;SVLEN=21395 TR:VR 145:23 32:0 chr1 2935403 r_1 T . Too_low_VAF END=25672449;SVTYPE=DEL;SVLEN=-22737046 TR:VR 79:3 45:0 chr10 3634942 r_91_0 G [chr13:92305177[GA . PASS SVTYPE=BND;MATEID=r_91_1;SVINSLEN=1;SVINSSEQ=G TR:VR 69:7 29:0 chr13 92305177 r_91_1 A [chr10:3634942[CA . PASS SVTYPE=BND;MATEID=r_91_0;SVINSLEN=1;SVINSSEQ=C TR:VR 69:7 29:0 chr12 3003148 r_185 G . PASS END=3011675;SVTYPE=DUP;SVLEN=8527 TR:VR 58:11 18:0 chr13 91799212 r_252_0 T ]chr14:89640994]C . PASS SVTYPE=BND;MATEID=r_252_1 TR:VR 62:8 40:0 chr14 89640994 r_252_1 C C[chr13:91799212[ . PASS SVTYPE=BND;MATEID=r_252_0 TR:VR 62:8 40:0 chr14 42595213 r_263 T . PASS END=42603686;SVTYPE=DUP;SVLEN=8473 TR:VR 48:5 34:0 chr16 33336944 d_661 G . PASS END=33337021;SVTYPE=DEL;SVLEN=-77;SVINSLEN=17;SVINSSEQ=CTGGCTGTGTGGCTTGG TR:VR 105:8 41:0 chr16 50867966 d_721 T . PASS END=50870321;SVTYPE=DEL;SVLEN=-2355 TR:VR 41:13 25:0 chr17 47769392 r_376_0 T [chr2:121079025[G . PASS SVTYPE=BND;MATEID=r_376_1 TR:VR 83:7 40:0 chr2 121079025 r_376_1 G [chr17:47769392[G . PASS SVTYPE=BND;MATEID=r_376_0 TR:VR 83:7 40:0 chr20 53641874 r_525_0 C [chr5:149766280[T . PASS SVTYPE=BND;MATEID=r_525_1 TR:VR 90:7 32:0 chr5 149766280 r_525_1 T [chr20:53641874[T . PASS SVTYPE=BND;MATEID=r_525_0 TR:VR 90:7 32:0 chr3 125247304 d_1217 A . PASS END=125247776;SVTYPE=DEL;SVLEN=-472 TR:VR 48:18 25:0 chr3 49969279 r_552 T . PASS END=49978905;SVTYPE=DUP;SVLEN=9626 TR:VR 38:6 17:0 chr4 141529165 r_609_0 T T]chr4:156779657] . PASS SVTYPE=BND;MATEID=r_609_1 TR:VR 55:13 38:0 chr4 156779657 r_609_1 G G]chr4:141529165] . PASS SVTYPE=BND;MATEID=r_609_0 TR:VR 55:13 38:0 chr5 114869531 i_1033 T . PASS END=114869531;SVTYPE=INS;SVINSLEN=303;SVINSSEQ=GGAACACCCAGATTCATAAAGCAATTCGTTAGAGACCTACAAAGAGACTTAGACTCCCACACAATAATAATGGGAGACTTTAACAACCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTTAACAAGGATATCCAGGAATTGAACCCATCTCTGCACCAAGTGGACCTAATAGACATCTACAGAACTCTCCACCCCAAACAACAGAGTATACATTCTTCTCAGCACCACACCACACTTATTCCAAAATTGACCACTTAGTTGGAAGTAAAGCACTCCTCAGCAAATGTAAAAGAACAG TR:VR 28:10 23:0 chr6 64860860 r_695 A . PASS END=64865177;SVTYPE=DUP;SVLEN=4317 TR:VR 29:3 19:0 chr8 103015175 r_767 A . Too_low_VAF END=103062610;SVTYPE=DUP;SVLEN=47435 TR:VR 242:11 37:0 chr8 38956663 r_744 G . PASS END=38963539;SVTYPE=DUP;SVLEN=6876 TR:VR 132:22 15:0 chr8 62639324 r_751 G . Too_low_VAF END=63182392;SVTYPE=DUP;SVLEN=543068 TR:VR 183:8 43:0 chr1 167553550 r_59_0 G ]chr13:95393218]C . PASS SVTYPE=BND;MATEID=r_59_1 TR:VR 93:15 54:0 chr13 95393218 r_59_1 C C[chr1:167553550[ . PASS SVTYPE=BND;MATEID=r_59_0 TR:VR 93:15 54:0 chr1 227474482 d_216 T . PASS END=227474532;SVTYPE=DEL;SVLEN=-50 TR:VR 83:9 25:0 chr10 37077352 r_110_0 T T[chr4:165186737[ . PASS SVTYPE=BND;MATEID=r_110_1 TR:VR 106:19 43:0 chr4 165186737 r_110_1 C ]chr10:37077352]C . PASS SVTYPE=BND;MATEID=r_110_0 TR:VR 106:19 43:0 chr12 30717627 d_357 T . Too_small_size END=30717662;SVTYPE=DEL;SVLEN=-35 TR:VR 44:13 18:0 chr17 16518809 i_431 T . PASS END=16518809;SVTYPE=INS;SVINSLEN=292;SVINSSEQ=GGGATTACGGGCGTGAGGCACCGCGCCCGGCCTGTCACTGTTTTGCTTTAAAAATTTCAGTGATCATCCTTGACTATAAACTCCCACTTGCATTGGTTTTCTAGGGCTGCAGCAACAAAGTACCATAAACTGGGAGACTTAAAACAATAGAAATTCTTCTCTCACTGTTTGGAAGCCGGAAGTCTGAAATCAAGGCATCAGCAGGGTTGGTTCTTCTGGAGGCTCCGAGGGAGAGGCGCTCCATTCTTCCCTTCCAGCTTCTGGGGCTGCCAGCAACCCTTGGTGTGCCCCA TR:VR 42:8 21:0 chr17 49439708 d_773 A . Too_small_size END=49439746;SVTYPE=DEL;SVLEN=-38 TR:VR 42:7 25:0 chr2 211485485 r_502_0 G [chr8:90849731[T . PASS SVTYPE=BND;MATEID=r_502_1 TR:VR 153:56 36:0 chr8 90849731 r_502_1 T [chr2:211485485[T . PASS SVTYPE=BND;MATEID=r_502_0 TR:VR 153:56 36:0 chr2 91477126 i_688 C . Too_low_VAF END=91477126;SVTYPE=INS;SVINSLEN=379;SVINSSEQ=CTCCGGCTTTCTGCCGCCGCGGCTTTTTTTGCCTCCGCGACTTTTTTCCCGACCTTTTTGCCCCCCGCCGCCGTGGCTTTTTGCCCGTCGCGGCTTTTTCACCCCCCCCCGCCGCCGCGGATTTTTCCCCCCTGCCGACGCGGCTTTTTGCCCGCCCGGCTTTTTGCCACCCCCGCCCCCTGCCGCCGCGGTTTTTTTTGCCGGACGCGGGTTTTGCGCCCCCGCCCCAGGACTTTCTGCCCGCCGCGGCTTTTTGCCCCCTGCCGCCGCGGCTTTTTTTGCCTCCGCGGCTTTTTGCCCGACCCGGCTTTTTGCCCCCCCGGCCGCTGTGGCTTTTTGCCGCCGCGGCTTTCACCCACCCCGCCGCCATGGCTTTCTC TR:VR 115:5 68:0 chr20 55846253 r_526 A . PASS END=55859839;SVTYPE=DUP;SVLEN=13586 TR:VR 51:3 16:0 chr4 141766428 r_610 A . PASS END=159917298;SVTYPE=DUP;SVLEN=18150870;SVINSLEN=3;SVINSSEQ=AGG TR:VR 71:18 41:0 chr6 110345367 i_1090 G . Too_small_size END=110345367;SVTYPE=INS;SVINSLEN=39;SVINSSEQ=CGATTCCTCAAAGAGCTAAAAGCAGAACTACCATTCAAC TR:VR 18:7 15:0 chrUn_KI270589v1 10539 i_1367 A . PASS END=10540;SVTYPE=INS;SVINSLEN=344;SVINSSEQ=AGATATTTCCTTTTCTACAATAGACCTCAAAGTGCTCCAAATGTCCACTTGCAGATCCTTCAGAAAGAGAATTTCAAAACAGCTCAATCAAAAGAAAGGTTTAACTCTGTGAGATGAATACACACATCACAAAGAAGTTTCCCAGATTGCTTTTGTCTAGATTTTATGTGAAGATATTTCCTTTTCTACCATAGGCCAAAAAGCACTCCAAATATGCACTTGAAGATTCTACAAAAACATTGTTTCCATTCTGCTCAAACAAAAGAAAGATTCAACTCCATGAGATAAATGCACACATCACAAAGAGGTTTCTCAGAATTCTTCTCTCTAGTTTTTATATGAAG TR:VR 39:4 23:0 chr1 167847646 r_60_0 T [chr17:74049980[C . Too_low_VAF SVTYPE=BND;MATEID=r_60_1 TR:VR 140:3 33:0 chr17 74049980 r_60_1 C [chr1:167847646[C . Too_low_VAF SVTYPE=BND;MATEID=r_60_0 TR:VR 140:3 33:0 chr1 231788312 d_217 A . PASS END=231788379;SVTYPE=DEL;SVLEN=-67 TR:VR 56:21 19:0 chr10 37077359 r_111_0 G [chr4:165104431[A . PASS SVTYPE=BND;MATEID=r_111_1 TR:VR 112:29 34:0 chr4 165104431 r_111_1 A [chr10:37077359[A . PASS SVTYPE=BND;MATEID=r_111_0 TR:VR 112:29 34:0 chr10 78129112 d_294 G . PASS END=78130508;SVTYPE=DEL;SVLEN=-1396 TR:VR 39:20 20:0 chr12 109549713 r_226 G . Too_low_VAF END=109571784;SVTYPE=DUP;SVLEN=22071 TR:VR 76:3 40:0 chr13 93888825 r_253 A . PASS END=93917935;SVTYPE=DUP;SVLEN=29110;SVINSLEN=5;SVINSSEQ=GGGAG TR:VR 74:4 26:0 chr14 44994642 r_265 T . PASS END=45310047;SVTYPE=DEL;SVLEN=-315405 TR:VR 70:11 39:0 chr16 51267300 r_334 G . PASS END=51271239;SVTYPE=DUP;SVLEN=3939 TR:VR 45:9 24:0 chr17 50970839 d_774 G . PASS END=50970932;SVTYPE=DEL;SVLEN=-93 TR:VR 46:24 17:0 chr17 79232209 i_458 C . PASS END=79232219;SVTYPE=INS;SVINSLEN=90;SVINSSEQ=CCAGCTTTTTTTTTTTTTTTTTTTTTTTGGCATATGGATGATTTGTTTGTTCCAGCACTCGTTGAAAAGACTATGTATGTGTGGTTTGGA TR:VR 47:13 22:0 chr19 4493335 i_559 T . PASS END=4493371;SVTYPE=INS;SVINSLEN=372;SVINSSEQ=ATGTGTATGTGTGTTATCTGTGTGGTGTGTTGTCTGTGTGGTGTCTGGTGTCTGATGTGTTTGTGTGTGTGTGTCTGTGTGTGTGTGTGTGGTATGTGTGTTATCTGTGTGTGTGGTCTGTGTGTGTGTGTGTGTTATCTGTGTGTGTTGTATCGGTGTGTGTTATCTGTGTGTGTGTGTGTGCGTGTGCATGCGTATGTGTGTGTCTGTTATCTGTGTGTGTTTTCTCTGTATCTGTGTGTGTGTGTATCTATGTGTGTGTAGTGTGTTATCTGTGTGTGTGGTGTGTGTAAGTGTGTGTTATCTGTGTGTGTTATCTGTATCTGTGTTTGGTGTGTGTGGTGTCTGTGGTGTGTGTGGCGAGACACCAAC TR:VR 31:3 25:0 chr2 211487930 r_503_0 A A]chr8:90852828] . PASS SVTYPE=BND;MATEID=r_503_1 TR:VR 149:52 38:0 chr8 90852828 r_503_1 C C]chr2:211487930] . PASS SVTYPE=BND;MATEID=r_503_0 TR:VR 149:52 38:0 chr2 56532260 r_455 A . PASS END=56795054;SVTYPE=DUP;SVLEN=262794 TR:VR 80:9 42:0 chr2 91477127 i_689 C . Too_low_VAF END=91477127;SVTYPE=INS;SVINSLEN=1661;SVINSSEQ=GCCGCCGCGACTTTTGCCCGCCGCGGCTTTTTACCCCCCGCCGCCGTGGCTTTTTGCCCCACTGCCGCCGCGGCTTTTGCCCCCACCCCGCCTCGGCTTTTTGCCCGCCGCGGCTTTGTTGTGACCCCCCTCGCCACCGCGGCTTTATGTCCCCCCCCCGCCGCCGCGGCTTTTTGCCCGCCGCGGGCTTTTTACGCCCCCCCGCCGCCGTGGCTTTTTCCCCACGGCGGTTTTTTGCACCCCCCCCCCCCCCCCCGCCGCCTCGGGTTTATGCCCACCGCGGCTTTTTGCACCCCGCCGCCGCAGCTTTTTTGTCCACCGCGGCTTTTTGCGCCCCCGCCGCCGCGGCTTTTTGTTGCCGCGGCTTTTTACCCGCTCCAGCTTTTTGCCCCACTGCCGCCGCGGGGTTTTGCCCGCCCCGGCTTTTTGCCCACCCCCGGCTTTTTGCCCCCGCCGCCGCCGCGGCTTTTTGTTCCCCCCCCCCCCCCCGGCCGCTTTTTGTTCCCCGCCGCCACGGCTTTTTGCCGGTCAGCGGCTTTGCCCCCCCGCCGCCGCGGCTTTTTGACCCCAACGCCGCGGCTTTTTCCCCCCCACGCCGCCGCGCCGGCACGCGCCCGCCACGGCTTTCCCCCCCCGCCGCCGTGGCTTTTTGCCCAACCCCGGCTTTTTGCCCGACTCGGCTTTTTAACCCCCCTGCCGGTGCCGCACTTATTTGCCCGCAGCGGCTTTTTGCACCCCCGCCGCCGCGGCTTTTTGTCCCCCCGCCGCGGGTTTTTTGCCCCCCCACGCGGCCGCGGCTTTTTGTCCCCCGCCGCCGCGGCTTTCTGCGCGCTGCGGCACCCCGCCCCCACGGCTTTCTGCCCACCGCGGCTTTTTGCCAGACCCGGCTTTTTTGATCCCCCGCCGCCGCGGCTTTTTGCCGGCCGCGGCTCTTTTCCCCCACCGCCGCGGCTTTTTGCCAGACCCGGCTTTTTGAACCCCCGCCGCCGCGGCTTTTTGCCCCCCGCCACCGCGGCCTTTTTGCCCGCTGCGGGTTTTTACCCCACGCCGCCGCAGCTTTTTGCCGGACCCGGCTTTTGCTCCCCCCGCCGCCGCCGCCGCCGCCGCCCCGGTGCCGCGGTTATTTGCCCGTCGCGGCTTTTTGCCCCCTGCTGCCGCGACTTTTTGCTCGACCCGGCTTTTTGCCCCCCGACGTCGCGGCTTTTTGCCCCCCGCCGCCGCGGCTTTTTCACCCCCTCCGCCGCGGCTTTTTGCCCGCTCCGGCTTTTTGCCCCCCGCCTCCCGGCTTTCTGCCGCCGCGGCTTTTTTTGCCTCCGCGACTTTTTTCCCGACCTTTTTGCCCCCCCCGCCGCCGTGGCTTTTTGCCCGTCGCGGCTTTTTCACCCCCCCCGCCGCCGCGGATTTTTCCCCCCTGCCGACGCGGCTTTTTGCCCGCCCCGGCTTTTTGCCACCCCCGCCCCCTGCCGCCGCGGTTTTTTTTGCCGGACGCGGGTTTTGCCCCCCGCCCCCAGGACTTTCTGCCCGCCGCGGCTTTTTGCCCCCTGCCGCCGCGGCTTTTTTTGCCTCCGCGGCTTTTTGCCCGACCCGGCTTTTTGCCCCCCCGGCCGCTGTGGCTTTTTGCCGCCGCGGCTTTGCCACCCCGCCGCCATGGCTTTTTCTCG TR:VR 115:5 68:1 chr20 56735765 r_527 T . PASS END=56780341;SVTYPE=DUP;SVLEN=44576 TR:VR 70:9 34:0 chr4 1427386 r_588_0 A A]chr7:148830744] . PASS SVTYPE=BND;MATEID=r_588_1 TR:VR 70:5 41:0 chr7 148830744 r_588_1 C C]chr4:1427386] . PASS SVTYPE=BND;MATEID=r_588_0 TR:VR 70:5 41:0 chr6 111202533 r_702 T . PASS END=111225794;SVTYPE=DUP;SVLEN=23261;SVINSLEN=8;SVINSSEQ=TTCAGGGG TR:VR 29:5 28:0 chr1 109979901 r_36_0 G ]chr2:197992867]T . PASS SVTYPE=BND;MATEID=r_36_1 TR:VR 63:6 43:0 chr2 197992867 r_36_1 T T[chr1:109979901[ . PASS SVTYPE=BND;MATEID=r_36_0 TR:VR 63:6 43:0 chr1 31789240 r_15 C . PASS END=31793873;SVTYPE=DUP;SVLEN=4633 TR:VR 43:3 28:0 chr10 37177239 r_112_0 C C]chr20:53689432] . PASS SVTYPE=BND;MATEID=r_112_1 TR:VR 76:27 51:0 chr20 53689432 r_112_1 T T]chr10:37177239] . PASS SVTYPE=BND;MATEID=r_112_0 TR:VR 76:27 51:0 chr10 79045375 r_121 C . PASS END=79052062;SVTYPE=DUP;SVLEN=6687 TR:VR 35:8 17:0 chr11 4749927 r_139 A . PASS END=4763711;SVTYPE=DUP;SVLEN=13784 TR:VR 40:8 22:0 chr12 11027726 r_189 G . PASS END=11028440;SVTYPE=DEL;SVLEN=-714 TR:VR 49:4 24:0 chr12 32731929 r_197_0 G ]chr13:35640044]G . PASS SVTYPE=BND;MATEID=r_197_1 TR:VR 95:9 39:0 chr13 35640044 r_197_1 G G[chr12:32731929[ . PASS SVTYPE=BND;MATEID=r_197_0 TR:VR 95:9 39:0 chr13 95417197 r_254_0 G [chr8:114590054[G . PASS SVTYPE=BND;MATEID=r_254_1 TR:VR 174:22 36:0 chr8 114590054 r_254_1 G [chr13:95417197[G . PASS SVTYPE=BND;MATEID=r_254_0 TR:VR 174:22 36:0 chr14 45275278 d_447 A . PASS END=45275327;SVTYPE=DEL;SVLEN=-49 TR:VR 38:3 25:0 chr16 53137067 r_335_0 A [chr17:66138094[G . Too_low_VAF SVTYPE=BND;MATEID=r_335_1 TR:VR 82:3 36:0 chr17 66138094 r_335_1 G [chr16:53137067[G . Too_low_VAF SVTYPE=BND;MATEID=r_335_0 TR:VR 82:3 36:0 chr17 53839793 d_775 G . PASS END=53840332;SVTYPE=DEL;SVLEN=-539 TR:VR 61:21 12:0 chr18 80258291 r_420_0 T ]chr9:138237406]TAGGGTTAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTTAGGGTTAGGGT . PASS SVTYPE=BND;MATEID=r_420_1;SVINSLEN=59;SVINSSEQ=TAGGGTTAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTTAGGGTTAGGG TR:VR 150:10 118:1 chr9 138237406 r_420_1 T TCCCTAACCCTAACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTAACCCTA[chr18:80258291[ . PASS SVTYPE=BND;MATEID=r_420_0;SVINSLEN=59;SVINSSEQ=CCCTAACCCTAACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTAACCCTA TR:VR 150:10 118:1 chr19 45708751 r_434 G . PASS END=45731598;SVTYPE=DEL;SVLEN=-22847 TR:VR 86:22 34:0 chr2 124835105 r_477_0 A A[chr5:169160813[ . PASS SVTYPE=BND;MATEID=r_477_1 TR:VR 70:9 38:0 chr5 169160813 r_477_1 C ]chr2:124835105]C . PASS SVTYPE=BND;MATEID=r_477_0 TR:VR 70:9 38:0 chr2 57828201 r_456_0 A [chr8:40049262[A . PASS SVTYPE=BND;MATEID=r_456_1 TR:VR 133:7 37:0 chr8 40049262 r_456_1 A [chr2:57828201[A . PASS SVTYPE=BND;MATEID=r_456_0 TR:VR 133:7 37:0 chr2 90382791 d_953 G . Too_low_VAF END=90384365;SVTYPE=DEL;SVLEN=-1574;SVINSLEN=19;SVINSSEQ=TTGAATGGAATCAAATGGA TR:VR 592:3 371:1 chr22 17877558 i_831 T . PASS END=17877558;SVTYPE=INS;SVINSLEN=245;SVINSSEQ=GGAGGTTAGGGGGAGGTTATGGAGGTTAGGGGAGGTTATGGAGGTTAGGGAGGGTTATGGAGGTTAGGGAGGTTAGGGAGGTTAGGGGAGGTTAGGCGGAGGTTATGGAGGTTATGGAGGTTATGGAGGTGAGGGAGGTTATGGAAGTTATGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTTAGAGGGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTGAG TR:VR 22:3 17:0 chr4 142787652 r_611 C . PASS END=142806103;SVTYPE=DUP;SVLEN=18451 TR:VR 68:4 29:0 chr6 113624210 d_1406 C . Too_small_size END=113624256;SVTYPE=DEL;SVLEN=-46 TR:VR 13:6 25:0 chr7 33062891 r_723 G . PASS END=33086738;SVTYPE=DUP;SVLEN=23847 TR:VR 56:6 27:0 chr8 66215905 d_1514 G . PASS END=66216354;SVTYPE=DEL;SVLEN=-449 TR:VR 91:9 22:0 chr1 109980069 r_37_0 A A[chr2:198069404[ . PASS SVTYPE=BND;MATEID=r_37_1 TR:VR 66:6 44:0 chr2 198069404 r_37_1 G ]chr1:109980069]G . PASS SVTYPE=BND;MATEID=r_37_0 TR:VR 66:6 44:0 chr1 17224783 r_7_0 C ]chr3:187516361]T . PASS SVTYPE=BND;MATEID=r_7_1 TR:VR 59:15 42:0 chr3 187516361 r_7_1 T T[chr1:17224783[ . PASS SVTYPE=BND;MATEID=r_7_0 TR:VR 59:15 42:0 chr1 32768010 r_16_0 C [chr2:70431803[A . PASS SVTYPE=BND;MATEID=r_16_1 TR:VR 72:11 44:0 chr2 70431803 r_16_1 A [chr1:32768010[A . PASS SVTYPE=BND;MATEID=r_16_0 TR:VR 72:11 44:0 chr10 12386429 r_93 G . PASS END=12406323;SVTYPE=DUP;SVLEN=19894;SVINSLEN=24;SVINSSEQ=TGTTTTGCAACAAAAAAACAAAAA TR:VR 79:8 35:0 chr10 79131741 r_122 A . PASS END=79895700;SVTYPE=DUP;SVLEN=763959 TR:VR 63:6 30:0 chr11 48925909 i_172 G . PASS END=48925911;SVTYPE=INS;SVINSLEN=1020;SVINSSEQ=AAGGAAGTTATTCCTGTTTCCAACGAAGGCCTCAAAGCAGTGCAGATTCCACAAAAAGTGTGTGAAAACCGCTCTATGAAAAGGTATGTTCAAGTCTGTGAGTTGAATGCCATCATCACAAAGAAGTTTCTGAGAATGCTTCTATCTGGTTTTTATGTGAAGATATTTCCTTTTCTACCATAGGCCTGAAAGTAGCTCCAAATATCCACTTGCAGATTCTACAAAAAGAGTGTTTCAAAACTGCTCTATCAAAAAAAAGGTTCAACTCTGTGAGTTTAATGCACACATAACCAAGTAGTTCCTGAGAATGCTTCTGTCCAGTTTTTATGTGAAGATATTCTGGTTTCCAACGAATTCCTCAAAGCAGTCCTAATATCTACTTGCAGATTCTACAAAAAGAGTCTTTCAAAACTGCTCTATCAAAAGGAAGGTTCAACTCTGTGAGTTGAATGCACACTTAACAAAGAAGTTTCTGAGAATGCTTCTGTCTAGTGTTTATGTGAATATATTGCCTTTTCCAATGAATGCCTAACTGCACTCCAAATATCCACTTGCAGGTTCTACATAAAGAGAGTTTCAAAACTGCTCTTTCAAAAGTAAGGTTCAACAGTGTGAGTTGAATGCACACTGACAAAGAAGTTCCTGAGAATGCTTCTGTCTAGTGTTTATGTAAATATATTCCCGTTTCCAACGAAGGCCTCAAAGCGATCCAAATATCCACTTGCAGATTCTACAAAAAGAATTTTACAAAACTGCTCTGTGAAAAGGTATGTTCAAATTTGTGAGTTGAAGGCAATCATCCCAAAGAAGTTTCTGAGAATATTTCAGTCTAGCTTTTATGTGAAGATATTTCCTTTTCTACCATAGGCCTGAAAGTACTCCAAATATCCATTTGAAGATTATACAAAAAGAGTGTTTCAAAACTGCTCTATCAAAAGAAGGCTCAACTCTGTGAGTTGAATCCACACATAACAAAGAAGTTCCTGAGAATGCTTCTGTTTTGTATATATGTGAAGGAAG TR:VR 43:5 19:0 chr12 112799442 r_227 T . PASS END=112801644;SVTYPE=DUP;SVLEN=2202 TR:VR 47:4 14:0 chr12 32732599 r_198_0 C C]chr6:9453404] . PASS SVTYPE=BND;MATEID=r_198_1 TR:VR 84:7 30:0 chr6 9453404 r_198_1 T T]chr12:32732599] . PASS SVTYPE=BND;MATEID=r_198_0 TR:VR 84:7 30:0 chr13 114354032 i_265 G . PASS END=114354039;SVTYPE=INS;SVINSLEN=326;SVINSSEQ=TCAGGCCAGGCCTAGGCCTGGGCCAGGCCAGGGCCAGGGCCAGGGCCAGGGCCTAGGGCCAGGGCCAGGCCAGGCCAGGCCAGGCCAGGGCCAGGCCAGGGCCAGGCCAGGCCAGGCCAGGGCCAGTGGGCCAGGGGCCAGGGGCCAGGCCAGGCCAGGCCAGGGCCAGGCCAGGCCTGGGCCAGGGCCAGGGCCAGGGGCCAGGGCCAGGGCCAGGCCAGGGCCAGGCCAGGGCCAGGGCCAGGCCAGGCCAGGCCAGGCCAGGGCCAGGGCCAGGCCAGGCCAGGCCAGGCCAGGCCAGGGCCAGGCCAGGGGGGCCAGGGCCA TR:VR 28:4 30:0 chr13 95417367 r_255_0 T T]chr8:116045701] . PASS SVTYPE=BND;MATEID=r_255_1 TR:VR 165:22 33:0 chr8 116045701 r_255_1 T T]chr13:95417367] . PASS SVTYPE=BND;MATEID=r_255_0 TR:VR 165:22 33:0 chr14 47070343 d_448 T . Too_small_size END=47070389;SVTYPE=DEL;SVLEN=-46 TR:VR 45:23 26:0 chr16 53214236 d_723 T . Too_small_size END=53214275;SVTYPE=DEL;SVLEN=-39 TR:VR 48:14 16:0 chr17 80434590 r_409 C . PASS END=80766907;SVTYPE=DUP;SVLEN=332317 TR:VR 100:13 34:0 chr17_KI270729v1_random 223412 i_507 C . Too_small_size END=223412;SVTYPE=INS;SVINSLEN=35;SVINSSEQ=GAATGGAATGGAATGCACTTGATGGAATGGATTGG TR:VR 12:4 4:0 chr19 1033738 d_852 T . PASS END=1034120;SVTYPE=DEL;SVLEN=-382;SVINSLEN=139;SVINSSEQ=GAACGGGGGAGCGTGGGTGGGACGGTGTCTGGTGTAGACCGGGAGCGTGGGTGGGACACCGTGTCTGGTGTAGACGGGGAGCGTGGGTGGGACAGTGTCTGGTGTAGACCGGGAGCGTGGGTGGGACACGGTGTCTGGT TR:VR 33:8 25:0 chr19 46216399 r_435_0 T T]chr5:128517] . PASS SVTYPE=BND;MATEID=r_435_1 TR:VR 60:14 50:0 chr5 128517 r_435_1 G G]chr19:46216399] . PASS SVTYPE=BND;MATEID=r_435_0 TR:VR 60:14 50:0 chr2 21663802 r_440 C . Too_low_VAF END=21672245;SVTYPE=DUP;SVLEN=8443 TR:VR 76:3 31:0 chr2 58812433 r_457 C . PASS END=58818603;SVTYPE=DUP;SVLEN=6170 TR:VR 57:4 15:0 chr2 91478699 d_991 C . Too_low_VAF END=91478829;SVTYPE=INS;SVINSLEN=231;SVINSSEQ=CCCCCCCCCCCCGCCGCCGCGGCTTTTTGCCCCACCGCCCGCCGCGGTTCCCCGCCCCCCCCGCGCCTCGGCTTTTTGCCCGCCGCGGCTTTGTTGTGACCCCCTCGACGCACCGCGAAAACCCCTGTCCCCCCGCCGCCGCGGCTTTTGCCCGCCGCGGGCTTTTGCCCCCCGCCTCCGTGGCTTTCTGCCCCGCGGTTTTTTGCCCCCCCCCCCCCGCCGCCTCCGGCT TR:VR 93:4 61:0 chr22 17934858 r_537 A . PASS END=17945876;SVTYPE=DUP;SVLEN=11018 TR:VR 40:9 31:0 chr3 133345256 r_573 A . PASS END=133357742;SVTYPE=DUP;SVLEN=12486;SVINSLEN=1;SVINSSEQ=T TR:VR 70:5 34:0 chr4 143724131 r_612 A . PASS END=143732772;SVTYPE=DUP;SVLEN=8641;SVINSLEN=1;SVINSSEQ=C TR:VR 44:3 31:0 chr6 115302108 i_1091 T . PASS END=115302117;SVTYPE=INS;SVINSLEN=75;SVINSSEQ=TCACATCGACAGTTGCACCAATGGTTGGCAAAACTACAGGGGTCTTAGCACAAATCAAGGCAATGGCAACAAACC TR:VR 35:10 22:0 chr6 70777176 d_1399 T . PASS END=70777246;SVTYPE=DEL;SVLEN=-70 TR:VR 30:10 15:0 chr7 3391220 d_1440 A . PASS END=3391298;SVTYPE=DEL;SVLEN=-78 TR:VR 33:11 13:0 chr8 105879467 i_1229 C . PASS END=105879467;SVTYPE=INS;SVINSLEN=169;SVINSSEQ=ACACATATATATGTATTTACATATATATTCACACATATATATGTATTTACATATATATTCACACATATATATGTATTTACATATATATTCACACATATATATGTATTTACATATATATTCACACATATATATGTATTTACATATATATTCACACATATATATGTATTTA TR:VR 92:15 17:0 chr8 41605205 r_745_0 T [chr8:83098067[A . Too_low_VAF SVTYPE=BND;MATEID=r_745_1 TR:VR 196:3 40:0 chr8 83098067 r_745_1 A [chr8:41605205[A . Too_low_VAF SVTYPE=BND;MATEID=r_745_0 TR:VR 196:3 40:0 chr8 66337948 r_752 C . Too_low_VAF END=66356822;SVTYPE=DUP;SVLEN=18874 TR:VR 156:4 25:0 chr9 135754924 d_1603 T . Too_small_size END=135754965;SVTYPE=DEL;SVLEN=-41 TR:VR 21:6 18:0 chr1 17224977 r_8_0 G G[chr3:100118483[ . PASS SVTYPE=BND;MATEID=r_8_1 TR:VR 74:15 43:0 chr3 100118483 r_8_1 A ]chr1:17224977]A . PASS SVTYPE=BND;MATEID=r_8_0 TR:VR 74:15 43:0 chr1 32782836 r_17_0 T T]chr2:70432041] . PASS SVTYPE=BND;MATEID=r_17_1 TR:VR 74:12 42:0 chr2 70432041 r_17_1 T T]chr1:32782836] . PASS SVTYPE=BND;MATEID=r_17_0 TR:VR 74:12 42:0 chr10 8067540 r_92 C . PASS END=8080567;SVTYPE=DUP;SVLEN=13027 TR:VR 58:11 22:0 chr12 113335638 r_228 C . PASS END=113345481;SVTYPE=DUP;SVLEN=9843 TR:VR 77:6 20:0 chr13 95456280 r_256 C . PASS END=95472814;SVTYPE=DUP;SVLEN=16534 TR:VR 79:4 30:0 chr16 53275851 d_724 A . PASS END=53276043;SVTYPE=DEL;SVLEN=-192 TR:VR 46:4 14:0 chr17 80498058 i_459 G . PASS END=80498058;SVTYPE=INS;SVINSLEN=127;SVINSSEQ=TTGTGTGTATATGTGTGTGTGTGGTATGTATATGTGAGTGTGCCTCTGTGTGTGTGTTTTGTATATGTGTGTGTTGTGTGTGTGAGTATGAGTGTGTATGTGTGTATGTGTGTATGTGTGTTGTGTA TR:VR 55:6 19:0 chr19 46477968 d_874 C . PASS END=46478498;SVTYPE=DEL;SVLEN=-530 TR:VR 23:5 18:0 chr22 19798379 d_1161 G . Too_small_size END=19798418;SVTYPE=DEL;SVLEN=-39 TR:VR 20:6 20:0 chr3 141845813 r_574_0 C ]chr9:6636478]C . PASS SVTYPE=BND;MATEID=r_574_1 TR:VR 58:12 35:0 chr9 6636478 r_574_1 C C[chr3:141845813[ . PASS SVTYPE=BND;MATEID=r_574_0 TR:VR 58:12 35:0 chr4 189557647 r_623_0 C [chrUn_KI270754v1:3426[TTCCTACCAACCTTTCCTACACCAACCCTTTCCTACAACCCTTTCCTACACCAACCCTTTCCTACACCAACCCTTTCCTACACCACCCTTTCCCACCACCCACCCTTTCCTACACCACCCTTTCCTACACAACCCTTCCCTACACCACCCCTTTCCTACACACCCCTTTCCTACACCACCCACACTTTCCTACACCACCCTTTCCTACACCACCCTTTCCCACACCACCCTTTCCTACACCAACCCTTTCCTACACTCCCTACCCTTTTA . PASS SVTYPE=BND;MATEID=r_623_1;SVINSLEN=269;SVINSSEQ=TTCCTACCAACCTTTCCTACACCAACCCTTTCCTACAACCCTTTCCTACACCAACCCTTTCCTACACCAACCCTTTCCTACACCACCCTTTCCCACCACCCACCCTTTCCTACACCACCCTTTCCTACACAACCCTTCCCTACACCACCCCTTTCCTACACACCCCTTTCCTACACCACCCACACTTTCCTACACCACCCTTTCCTACACCACCCTTTCCCACACCACCCTTTCCTACACCAACCCTTTCCTACACTCCCTACCCTTTT TR:VR 46:4 25:0 chrUn_KI270754v1 3426 r_623_1 A [chr4:189557647[AAAAGGGTAGGGAGTGTAGGAAAGGGTTGGTGTAGGAAAGGGTGGTGTGGGAAAGGGTGGTGTAGGAAAGGGTGGTGTAGGAAAGTGTGGGTGGTGTAGGAAAGGGGTGTGTAGGAAAGGGGTGGTGTAGGGAAGGGTTGTGTAGGAAAGGGTGGTGTAGGAAAGGGTGGGTGGTGGGAAAGGGTGGTGTAGGAAAGGGTTGGTGTAGGAAAGGGTTGGTGTAGGAAAGGGTTGTAGGAAAGGGTTGGTGTAGGAAAGGTTGGTAGGAAA . PASS SVTYPE=BND;MATEID=r_623_0;SVINSLEN=269;SVINSSEQ=AAAAGGGTAGGGAGTGTAGGAAAGGGTTGGTGTAGGAAAGGGTGGTGTGGGAAAGGGTGGTGTAGGAAAGGGTGGTGTAGGAAAGTGTGGGTGGTGTAGGAAAGGGGTGTGTAGGAAAGGGGTGGTGTAGGGAAGGGTTGTGTAGGAAAGGGTGGTGTAGGAAAGGGTGGGTGGTGGGAAAGGGTGGTGTAGGAAAGGGTTGGTGTAGGAAAGGGTTGGTGTAGGAAAGGGTTGTAGGAAAGGGTTGGTGTAGGAAAGGTTGGTAGGAA TR:VR 46:4 25:0 chr5 25876132 r_629 T . Too_low_VAF END=26171460;SVTYPE=DUP;SVLEN=295328;SVINSLEN=26;SVINSSEQ=TGCTGGTTGGTGCGTTTACAATCCTT TR:VR 65:3 38:0 chr6 117176753 r_703 G . PASS END=117195707;SVTYPE=DUP;SVLEN=18954 TR:VR 59:3 39:0 chr1 118752710 r_38_0 G [chr12:96566419[C . PASS SVTYPE=BND;MATEID=r_38_1 TR:VR 100:8 42:0 chr12 96566419 r_38_1 C [chr1:118752710[C . PASS SVTYPE=BND;MATEID=r_38_0 TR:VR 100:8 42:0 chr1 172649642 r_61 G . PASS END=172672888;SVTYPE=DUP;SVLEN=23246 TR:VR 139:8 20:0 chr13 97372459 r_257_0 C CAGAGAGTTGGCCTTAGGAAGAATTTATTGGAAATTAGTTGATAATATGTCATAAAGGTCTTACCACATCTTCTGAACTCTCCTCCAAAGA[chr15:91792679[ . PASS SVTYPE=BND;MATEID=r_257_1;SVINSLEN=90;SVINSSEQ=AGAGAGTTGGCCTTAGGAAGAATTTATTGGAAATTAGTTGATAATATGTCATAAAGGTCTTACCACATCTTCTGAACTCTCCTCCAAAGA TR:VR 57:7 38:0 chr15 91792679 r_257_1 T ]chr13:97372459]TCTTTGGAGGAGAGTTCAGAAGATGTGGTAAGACCTTTATGACATATTATCAACTAATTTCCAATAAATTCTTCCTAAGGCCAACTCTCTT . PASS SVTYPE=BND;MATEID=r_257_0;SVINSLEN=90;SVINSSEQ=TCTTTGGAGGAGAGTTCAGAAGATGTGGTAAGACCTTTATGACATATTATCAACTAATTTCCAATAAATTCTTCCTAAGGCCAACTCTCT TR:VR 57:7 38:0 chr16 57155654 d_725 T . Too_small_size END=57155693;SVTYPE=DEL;SVLEN=-39 TR:VR 32:7 21:0 chr2 125365991 r_480 A . PASS END=125371120;SVTYPE=DUP;SVLEN=5129 TR:VR 38:4 19:0 chr4 14632006 d_1237 A . PASS END=14632319;SVTYPE=DEL;SVLEN=-313 TR:VR 39:14 10:0 chr5 31473643 r_630 A . PASS END=31486496;SVTYPE=DUP;SVLEN=12853 TR:VR 50:6 20:0 chr6 118411229 r_704 A . PASS END=119138266;SVTYPE=DUP;SVLEN=727037 TR:VR 69:12 36:0 chr8 106369348 r_768 A . Too_low_VAF END=106967949;SVTYPE=DUP;SVLEN=598601 TR:VR 223:4 47:0 chr1 119948968 d_29 G . Too_small_size END=119949004;SVTYPE=DEL;SVLEN=-36 TR:VR 30:12 19:0 chr1 174136405 i_42 A . Too_low_VAF END=174136405;SVTYPE=INS;SVINSLEN=90;SVINSSEQ=TATATATATATAACTTTCTGTTATATATATATATAACTTTCTGTTATATATATATGTAACTTTCTTAATTTATATATATAATTTCTTGTT TR:VR 77:3 10:0 chr1 3559753 r_2_0 T ]chr6:34622998]TAATCCCAAAG . PASS SVTYPE=BND;MATEID=r_2_1;SVINSLEN=10;SVINSSEQ=TAATCCCAAA TR:VR 77:9 32:0 chr6 34622998 r_2_1 G GTTTGGGATTA[chr1:3559753[ . PASS SVTYPE=BND;MATEID=r_2_0;SVINSLEN=10;SVINSSEQ=TTTGGGATTA TR:VR 77:9 32:0 chr10 82731542 r_123 T . PASS END=83985566;SVTYPE=DUP;SVLEN=1254024 TR:VR 64:13 37:0 chr11 49094749 r_148_0 G G]chr11:89734857] . PASS SVTYPE=BND;MATEID=r_148_1 TR:VR 58:4 30:0 chr11 89734857 r_148_1 G G]chr11:49094749] . PASS SVTYPE=BND;MATEID=r_148_0 TR:VR 58:4 30:0 chr14_GL000225v1_random 28375 d_479 A . Too_low_VAF END=28642;SVTYPE=DEL;SVLEN=-267;SVINSLEN=133;SVINSSEQ=GGATATCTGAACTGATCACCCAGGTAGCTGAGAAGTCTTACTCTGAGAGGCTCTGTCATCTGTGGGCATTGTGTCAAATATCTACAGGAAATTTCACATATCTCTACACTGACTTCACCTAAGTAATGTAACC TR:VR 229:3 164:0 chr16 58997533 i_401 A . Too_small_size END=58997533;SVTYPE=INS;SVINSLEN=44;SVINSSEQ=GATGCCTGGCATCTGGGAGATGTCTGGCACTGGGAGATGTCTGG TR:VR 32:6 24:0 chr17 59542994 d_778 C . PASS END=59543060;SVTYPE=DEL;SVLEN=-66 TR:VR 52:9 20:0 chr19 18686992 d_857 C . Too_small_size END=18687032;SVTYPE=DEL;SVLEN=-40 TR:VR 20:4 26:0 chr2 64376187 i_638 C . PASS END=64376187;SVTYPE=INS;SVINSLEN=89;SVINSSEQ=ATCACCACCATCACCACCATACCACTACCACCACCACCACCATCACCACCATCACCACCATACCACTACCACCACCACCACCATCACCA TR:VR 37:7 10:0 chr5 31851553 r_631 T . PASS END=31875599;SVTYPE=DUP;SVLEN=24046 TR:VR 54:11 35:0 chr6 76512708 d_1402 A . PASS END=76512776;SVTYPE=DEL;SVLEN=-68 TR:VR 33:18 25:0 chr8 106569144 r_769 A . Too_low_VAF END=106913443;SVTYPE=DUP;SVLEN=344299 TR:VR 244:9 48:0 chr1 120706754 i_24 T . PASS END=120706754;SVTYPE=INS;SVINSLEN=87;SVINSSEQ=TTGTTTGTTTTTGGTTTTGGCTGATGGTCCCTCATTGTCACATCTCTTTCTCTGACACTCCTGCCTCCTTTTTCTATAGGGACCCCT TR:VR 30:10 23:0 chr1 175543040 r_62_0 G ]chr11:84442815]T . PASS SVTYPE=BND;MATEID=r_62_1 TR:VR 130:9 38:0 chr11 84442815 r_62_1 T T[chr1:175543040[ . PASS SVTYPE=BND;MATEID=r_62_0 TR:VR 130:9 38:0 chr10 84294688 r_124_0 A ]chr12:48933225]GGTTCAGT . PASS SVTYPE=BND;MATEID=r_124_1;SVINSLEN=7;SVINSSEQ=GGTTCAG TR:VR 74:11 32:0 chr12 48933225 r_124_1 T TCTGAACC[chr10:84294688[ . PASS SVTYPE=BND;MATEID=r_124_0;SVINSLEN=7;SVINSSEQ=CTGAACC TR:VR 74:11 32:0 chr12 116274275 r_231 T . PASS END=116297787;SVTYPE=DUP;SVLEN=23512 TR:VR 85:8 39:0 chr16 34241660 d_664 T . PASS END=34242837;SVTYPE=DEL;SVLEN=-1177 TR:VR 48:16 27:0 chr16 60344857 r_336 T . PASS END=60355179;SVTYPE=DUP;SVLEN=10322 TR:VR 53:14 21:0 chr17 59747049 r_378 G . PASS END=77743404;SVTYPE=DUP;SVLEN=17996355 TR:VR 115:22 27:0 chr17 80743817 d_801 A . PASS END=80743845;SVTYPE=INS;SVINSLEN=135;SVINSSEQ=CTGTCCTGGCTACTAGCACTGTCCTGGTTACTAGCACAGCCCTGGCTACTAGCACAGCCCCATTACTAGCACAGCCCTGGCTACTAGCACTGTCCTGGTTACTAGCACAGCCCTGGCTACTAGCACTGTCCTGGT TR:VR 59:7 20:0 chr2 22170123 d_913 A . PASS END=22170447;SVTYPE=DEL;SVLEN=-324 TR:VR 51:13 16:0 chr2 65471313 r_458 A . PASS END=69855806;SVTYPE=DEL;SVLEN=-4384493 TR:VR 66:5 48:0 chr5 35348579 r_632 T . PASS END=35357241;SVTYPE=DUP;SVLEN=8662 TR:VR 39:5 24:0 chr7 4146470 i_1128 C . PASS END=4146470;SVTYPE=INS;SVINSLEN=174;SVINSSEQ=ACCTGCTCTCTCCGACACGTGAGCATTGCATTCACACCTTCTGCCTCACACCTGCTCTCTCAGACATGTGAGCATTTCGTGACACACTTTCAGCCTCACACCTGCTCTCTCAGACATGTGAGCATTGCATGACACACTTTCAGCCTCACAGCTGCTCTCTCAGACATGTGAGCA TR:VR 36:7 20:0 chr8 108128295 d_1534 G . Too_small_size END=108128330;SVTYPE=DEL;SVLEN=-35 TR:VR 97:13 20:0 chr1 120706833 i_25 A . PASS END=120706833;SVTYPE=INS;SVINSLEN=89;SVINSSEQ=GGGACCCCTTTGTTTGTTTTTGGTTTTGGCTGATGGTCCCTCATTGTCACATCTCTTTCTCTGACACTCCTGCCTCCTTTTTCTATAGG TR:VR 30:10 23:0 chr1 175543215 r_63_0 C C[chr11:84069355[ . PASS SVTYPE=BND;MATEID=r_63_1 TR:VR 126:9 39:0 chr11 84069355 r_63_1 C ]chr1:175543215]C . PASS SVTYPE=BND;MATEID=r_63_0 TR:VR 126:9 39:0 chr1 3605140 r_3_0 A A[chr6:34589312[ . PASS SVTYPE=BND;MATEID=r_3_1 TR:VR 65:8 43:0 chr6 34589312 r_3_1 C ]chr1:3605140]C . PASS SVTYPE=BND;MATEID=r_3_0 TR:VR 65:8 43:0 chr10 39529471 i_127 G . PASS END=39529471;SVTYPE=INS;SVINSLEN=245;SVINSSEQ=TTTTTAAACGCTCTTTTTTTAGAATCTGCAAGTGGATATTTGGAGCGCTCTGAGGGTTATGGTGGAAAAGGAAATATCTTCACATAAACACTAGACAGAAGCTAGTGCATATTTGGAGCACTTTGAGGCCTATGTTGGAAATGGAAATATCTTCATACAAAAACTAGACAGAATCATTCTCAGAAACTACTTTGTGATGTGTGCATTCAACTCACAGAGTTGAACTATTATTTTGATACAGAAGT TR:VR 41:9 28:0 chr12 122434725 r_232_0 T [chr6:122153704[G . PASS SVTYPE=BND;MATEID=r_232_1 TR:VR 75:14 38:0 chr6 122153704 r_232_1 G [chr12:122434725[G . PASS SVTYPE=BND;MATEID=r_232_0 TR:VR 75:14 38:0 chr14 52368913 r_266 G . PASS END=52381306;SVTYPE=DUP;SVLEN=12393 TR:VR 42:3 26:0 chr15 17047547 i_348 A . PASS END=17047547;SVTYPE=INS;SVINSLEN=205;SVINSSEQ=ATCAGACAGAAGCATTCGTAGAAACTTCTTTTTGACGTGTGCATTCATCTCACAGATTTGAACCTTTCTTTTGATTGAACAGTTTTGAAACCATCTTATAGCAGAATCTGCAAGTGTATATTTGGAGCGCATGTGGAATATGGTGGAAAAGGAATCTTCTTCACATAAAAACTAGAAAGAAGCATTCTGAGAAACTTCTTTGTGA TR:VR 59:4 36:0 chr16 63394435 r_337 G . PASS END=63397723;SVTYPE=DUP;SVLEN=3288 TR:VR 44:4 21:0 chr17 59904743 r_379 C . Too_low_VAF END=73169259;SVTYPE=DUP;SVLEN=13264516 TR:VR 135:3 36:0 chr2 127578065 d_1024 T . PASS END=127578208;SVTYPE=DEL;SVLEN=-143 TR:VR 20:4 29:0 chr2 66553222 i_639 A . PASS END=66553233;SVTYPE=INS;SVINSLEN=51;SVINSSEQ=AAAAGCAGGTGGTTTAACTTTTTCCCTAACCCTAACCCTAACCCTAACCCT TR:VR 24:6 20:0 chr3 150608806 r_575 G . PASS END=151179836;SVTYPE=DUP;SVLEN=571030;SVINSLEN=9;SVINSSEQ=TTAGATATT TR:VR 108:21 38:0 chr3 60755381 r_553 A . PASS END=61343971;SVTYPE=DUP;SVLEN=588590;SVINSLEN=2;SVINSSEQ=CC TR:VR 62:9 40:0 chr6 125373542 d_1409 A . PASS END=125373591;SVTYPE=DEL;SVLEN=-49 TR:VR 13:8 14:0 chr6 17878886 r_678 C . PASS END=17882841;SVTYPE=DUP;SVLEN=3955 TR:VR 54:10 24:0 chr6 82297836 r_696_0 T T]chr6:82309208] . PASS SVTYPE=BND;MATEID=r_696_1 TR:VR 41:4 27:0 chr6 82309208 r_696_1 C C]chr6:82297836] . PASS SVTYPE=BND;MATEID=r_696_0 TR:VR 41:4 27:0 chr8 108380844 d_1535 C . Too_low_VAF;Too_small_size END=108380887;SVTYPE=DEL;SVLEN=-43;SVINSLEN=2;SVINSSEQ=AC TR:VR 110:3 20:0 chr8 43238080 d_1498 T . Too_low_VAF END=43238197;SVTYPE=DEL;SVLEN=-117;SVINSLEN=29;SVINSSEQ=TTACAGAATAAAACATATAGTTTGGGTAA TR:VR 434:5 182:0 chr1 37156554 d_14 G . Too_small_size END=37156595;SVTYPE=DEL;SVLEN=-41 TR:VR 37:6 14:0 chr10 84857747 r_125_0 G G[chr12:48760839[ . PASS SVTYPE=BND;MATEID=r_125_1 TR:VR 84:13 37:0 chr12 48760839 r_125_1 A ]chr10:84857747]A . PASS SVTYPE=BND;MATEID=r_125_0 TR:VR 84:13 37:0 chr12 123911309 i_210 G . Too_small_size END=123911309;SVTYPE=INS;SVINSLEN=42;SVINSSEQ=GGGGTCTGTCCTGGGGGGTCTGTCCTGGGGGGGTCTGTCCTG TR:VR 37:19 17:0 chr12 37852744 r_199 C . PASS END=38215571;SVTYPE=DUP;SVLEN=362827;SVINSLEN=127;SVINSSEQ=CCATAGGCCTCAAAGCACCCTCAAATGTCCCCATGCAGATTCTACAAAAAGACTGTTTCCAAACTGCTCAATCAAAAGAAAGGTACAACTCTGTGAGTTCAATGCACACATCACAAAGACGTTTCTC TR:VR 87:10 46:0 chr14 102403746 r_290 A . PASS END=102408849;SVTYPE=DUP;SVLEN=5103 TR:VR 47:10 22:0 chr14 55176255 d_452 C . Too_small_size END=55176293;SVTYPE=DEL;SVLEN=-38 TR:VR 47:11 22:0 chr16 34590539 d_666 A . Too_low_VAF END=34590648;SVTYPE=DEL;SVLEN=-109;SVINSLEN=11;SVINSSEQ=TGATTTCACTC TR:VR 675:3 339:1 chr17 59910318 r_380_0 C C]chr17:68588551] . Too_low_VAF SVTYPE=BND;MATEID=r_380_1 TR:VR 147:5 42:0 chr17 68588551 r_380_1 G G]chr17:59910318] . Too_low_VAF SVTYPE=BND;MATEID=r_380_0 TR:VR 147:5 42:0 chr2 227506499 d_1038 T . PASS END=227506546;SVTYPE=DEL;SVLEN=-47 TR:VR 39:13 13:0 chr6 12662187 r_674 A . PASS END=12678495;SVTYPE=DUP;SVLEN=16308 TR:VR 79:18 27:0 chr6 82297849 r_697_0 C [chr6:82309242[G . PASS SVTYPE=BND;MATEID=r_697_1 TR:VR 41:5 27:0 chr6 82309242 r_697_1 G [chr6:82297849[G . PASS SVTYPE=BND;MATEID=r_697_0 TR:VR 41:5 27:0 chr1 178209358 r_64 T . Too_low_VAF END=178212873;SVTYPE=DUP;SVLEN=3515 TR:VR 93:4 25:0 chr1 37326832 r_18 A . PASS END=37340163;SVTYPE=DUP;SVLEN=13331 TR:VR 57:9 24:0 chr10 85269573 r_126 T . PASS END=85342678;SVTYPE=DUP;SVLEN=73105 TR:VR 56:3 39:0 chr14 102429562 r_291_0 T T[chr7:66054729[ . PASS SVTYPE=BND;MATEID=r_291_1 TR:VR 71:10 34:0 chr7 66054729 r_291_1 C ]chr14:102429562]C . PASS SVTYPE=BND;MATEID=r_291_0 TR:VR 71:10 34:0 chr14 56437635 i_297 C . PASS END=56437635;SVTYPE=INS;SVINSLEN=302;SVINSSEQ=TTTCAGTTCCTTTTGAGATGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCACAATCTTGGCTCACTGCAGCCTCCATCTCCTGGGTTCAAGCAGTTCTCCTGTCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACACGCCATCACGCCCAGGTAATTTTTTGTATTTTTAGTAGATATGGGGTTTCACCATGTTGTCCAGGCTGGTTGTGAACTCCTGAGCTCAGGCAGTCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATAAGCCACCGTACCTGGCCTACTT TR:VR 35:3 15:0 chr14_GL000225v1_random 111210 d_591 A . Too_low_VAF END=111344;SVTYPE=INS;SVINSLEN=135;SVINSSEQ=ATACCCCTCTAGGCAGAGTATAGAGAAGAGTTCCATCACCTGGGTGATCAGTGCAGAAATATGCCACAATGCCGCCAGTAGGCAGGTATAGACAAGAGTTTCATCACCTGCGTGATCACTGCAGAGATATGTCAC TR:VR 401:3 266:0 chr19 21010234 i_568 G . PASS END=21010258;SVTYPE=INS;SVINSLEN=277;SVINSSEQ=TGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAGCTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 44:15 28:0 chr19 50981651 i_589 G . PASS END=50981651;SVTYPE=INS;SVINSLEN=372;SVINSSEQ=GGGAACAGAGACCAGAGAGAGAGGGGAACAGAGACCCAGAGAGAGAGGGACAGAGACCCACAGAGAGAGGAGGGGGAACAGAGACCAGAGAGAGAGGGTGGACAGAGACAGAGATCCAGAGAGAGGGCAGACAGAGACCCAGAGAGAGAGGGACAGAGACCAGAGGCCCAGGGGAGGGGGAACAGAGACCAGAGAGAGAGGGGGACAGAGACCCAGAGAGAGAGGGACAGAGACCCAGAAAGAGAGGAGGGGGAACAGAGACCCAGAGAGAGAGGGGGACAGAGACACAGAGAGAGGGGAACAGAGATCCAGAGAGAAAGGCAGACAGAGACCCAGAGAGAGGGGGACAGAGCTCCCCAGGGAGAGGGGGTA TR:VR 32:3 11:0 chr2 130993104 r_481 G . PASS END=131046374;SVTYPE=DUP;SVLEN=53270 TR:VR 50:7 40:0 chr2 233609603 r_506_0 A [chrX:34367110[A . PASS SVTYPE=BND;MATEID=r_506_1 TR:VR 67:10 34:0 chrX 34367110 r_506_1 A [chr2:233609603[A . PASS SVTYPE=BND;MATEID=r_506_0 TR:VR 67:10 34:0 chr2 6779789 d_910 A . PASS END=6781094;SVTYPE=DEL;SVLEN=-1305;SVINSLEN=7;SVINSSEQ=CCTCACA TR:VR 62:10 16:0 chr21 7936263 d_1119 T . Too_low_VAF END=7936306;SVTYPE=INS;SVINSLEN=43;SVINSSEQ=CAAATCCATGCTATTCGAATAAATTCCATTCGAGACCATTCCT TR:VR 287:5 200:1 chr22 28601259 r_538 G . PASS END=28718105;SVTYPE=DUP;SVLEN=116846 TR:VR 55:13 28:0 chr3 64823704 r_554_0 G [chr6:131773521[G . PASS SVTYPE=BND;MATEID=r_554_1 TR:VR 75:26 41:0 chr6 131773521 r_554_1 G [chr3:64823704[G . PASS SVTYPE=BND;MATEID=r_554_0 TR:VR 75:26 41:0 chr6 21415206 r_679 G . PASS END=21589053;SVTYPE=DUP;SVLEN=173847 TR:VR 103:19 41:0 chr6 82298310 r_698_0 C [chr6:82307972[A . PASS SVTYPE=BND;MATEID=r_698_1 TR:VR 41:4 25:0 chr6 82307972 r_698_1 A [chr6:82298310[A . PASS SVTYPE=BND;MATEID=r_698_0 TR:VR 41:4 25:0 chr8 114012791 r_770 G . PASS END=114022838;SVTYPE=DUP;SVLEN=10047;SVINSLEN=1;SVINSSEQ=A TR:VR 166:14 22:0 chr8 70155644 r_753 C . Too_low_VAF END=70172156;SVTYPE=DUP;SVLEN=16512;SVINSLEN=16;SVINSSEQ=CCATAAACAAACAAAA TR:VR 131:6 19:0 chr1 180292357 d_198 T . Too_small_size END=180292394;SVTYPE=DEL;SVLEN=-37 TR:VR 72:6 17:0 chr1 237883054 d_222 G . PASS END=237883131;SVTYPE=DEL;SVLEN=-77 TR:VR 41:16 18:0 chr14 56437944 d_453 A . PASS END=56438125;SVTYPE=DEL;SVLEN=-181 TR:VR 36:3 15:0 chr17 60167397 r_382 G . Too_low_VAF END=60182764;SVTYPE=DUP;SVLEN=15367 TR:VR 111:5 25:0 chr17_KI270730v1_random 104887 d_831 T . Too_low_VAF END=104997;SVTYPE=DEL;SVLEN=-110;SVINSLEN=10;SVINSSEQ=GGAGTGGAAA TR:VR 219:5 99:1 chr2 234117126 d_1039 T . PASS END=234117186;SVTYPE=DEL;SVLEN=-60 TR:VR 32:6 18:0 chr22 32491227 r_539_0 G ]chr8:93200185]A . PASS SVTYPE=BND;MATEID=r_539_1 TR:VR 119:9 43:0 chr8 93200185 r_539_1 A A[chr22:32491227[ . PASS SVTYPE=BND;MATEID=r_539_0 TR:VR 119:9 43:0 chr3 16146889 r_546 T . PASS END=16152813;SVTYPE=DUP;SVLEN=5924 TR:VR 47:7 24:0 chr5 37385979 r_633 T . PASS END=37839360;SVTYPE=DUP;SVLEN=453381;SVINSLEN=2;SVINSSEQ=AA TR:VR 79:11 49:0 chr6 21519600 r_680 A . PASS END=21528307;SVTYPE=DUP;SVLEN=8707 TR:VR 78:6 24:0 chr6 82298735 r_699_0 T T]chr6:82387549] . PASS SVTYPE=BND;MATEID=r_699_1 TR:VR 62:4 35:0 chr6 82387549 r_699_1 G G]chr6:82298735] . PASS SVTYPE=BND;MATEID=r_699_0 TR:VR 62:4 35:0 chr8 114999857 r_771 T . PASS END=115007496;SVTYPE=DUP;SVLEN=7639;SVINSLEN=1;SVINSSEQ=G TR:VR 193:32 14:0 chr8 142012786 i_1257 C . PASS END=142012786;SVTYPE=INS;SVINSLEN=657;SVINSSEQ=CACCACCACACTCCGTCACCACCATCACCATCAGCACCCCCATCATTACGTCATCACCACCACCATCACCACCATCACCATCAGCACCCCCATCATGCCATCATCACCAACACCTCCATCACCACCGGCACCATCAGCACCCCCATCATTACGTCATTATCACCATCACCTCCATCACCACCGTCACCATCAGCACCCCCATCGTTACATCATTATCACCACCACCTCCATCATCACCGTCACCATCAGCACCCCCATCGTTACATCATCACCAGCACCTCCATCACCACCATCACCATCAGCACCCCCATCATTACCATCATTATCACCACCACCTCATCACCACCATCACCATCAGTACCCCCATCATCATTACATCATCACCACCTCCATCACCACCATCACCATCAGCACCTCCATCATTACATCGTTATCACCACCACCTCCATCACCACCGTCACCATCAGCACTCCCATCATTACATCATCACCACCACCTCCATCACCACCGTCACCATCAGCACCCCCATCGTTACATCATTATCACCATCACCTCCATCACCACCGTCACCATCAGCACCCCCATCGTTACATCATTATCACCATCACCTTCATCATCACCGTCACCATCAGCACCCCATCGTTCATCATTATCACC TR:VR 109:6 15:0 chrX 19843745 d_1733 G . PASS END=19843813;SVTYPE=DEL;SVLEN=-68 TR:VR 21:6 21:0 chr1 40534606 d_15 A . Too_small_size END=40534651;SVTYPE=DEL;SVLEN=-45 TR:VR 34:17 10:0 chr16 36169146 i_398 C . PASS END=36169147;SVTYPE=INS;SVINSLEN=51;SVINSSEQ=AATGACTCCATTCAAGTCCGTTTGATGTTTCCTTTCAATTCCATTCGATGA TR:VR 48:4 28:0 chr17 60282050 r_383 T . Too_low_VAF END=60293167;SVTYPE=DUP;SVLEN=11117 TR:VR 118:5 21:0 chr19 53165510 r_437 A . PASS END=53182857;SVTYPE=DUP;SVLEN=17347 TR:VR 54:7 26:0 chr2 234573 d_884 T . PASS END=234682;SVTYPE=DEL;SVLEN=-109 TR:VR 46:24 7:0 chr22 32570023 r_540_0 C C[chr8:93200228[ . PASS SVTYPE=BND;MATEID=r_540_1 TR:VR 115:11 45:0 chr8 93200228 r_540_1 T ]chr22:32570023]T . PASS SVTYPE=BND;MATEID=r_540_0 TR:VR 115:11 45:0 chr3 161603142 r_576 T . PASS END=161629038;SVTYPE=DUP;SVLEN=25896 TR:VR 91:16 27:0 chr5 122298232 d_1360 A . PASS END=122298283;SVTYPE=DEL;SVLEN=-51 TR:VR 18:12 12:0 chr5 37646451 r_634 A . PASS END=37825841;SVTYPE=DUP;SVLEN=179390 TR:VR 92:16 46:0 chr6 22791438 d_1385 G . Too_small_size END=22791475;SVTYPE=DEL;SVLEN=-37 TR:VR 31:10 22:0 chr8 115130249 d_1537 A . PASS END=115130308;SVTYPE=DEL;SVLEN=-59 TR:VR 137:27 18:0 chrX 20305957 r_822_0 G [chrX:44988554[T . PASS SVTYPE=BND;MATEID=r_822_1 TR:VR 52:9 34:0 chrX 44988554 r_822_1 T [chrX:20305957[T . PASS SVTYPE=BND;MATEID=r_822_0 TR:VR 52:9 34:0 chr10 130086197 d_304 C . PASS END=130087360;SVTYPE=DEL;SVLEN=-1163 TR:VR 28:7 21:0 chr14 61084910 d_455 C . Too_small_size END=61084945;SVTYPE=DEL;SVLEN=-35 TR:VR 27:4 22:0 chr16 3868031 r_323 T . PASS END=3876617;SVTYPE=DUP;SVLEN=8586 TR:VR 54:10 21:0 chr17 60496939 r_384 T . Too_low_VAF END=73051419;SVTYPE=DUP;SVLEN=12554480 TR:VR 155:6 44:0 chr2 235163221 r_507 T . PASS END=235353841;SVTYPE=DUP;SVLEN=190620 TR:VR 73:4 42:0 chr3 69488013 r_555_0 T T[chr6:151920152[ . PASS SVTYPE=BND;MATEID=r_555_1 TR:VR 83:10 44:0 chr6 151920152 r_555_1 T ]chr3:69488013]T . PASS SVTYPE=BND;MATEID=r_555_0 TR:VR 83:10 44:0 chr4 152296897 d_1294 A . PASS END=152297130;SVTYPE=DEL;SVLEN=-233 TR:VR 60:7 15:0 chr5 37732720 r_635 A . PASS END=37752527;SVTYPE=DUP;SVLEN=19807 TR:VR 137:30 36:0 chr6 139734439 r_705 A . PASS END=139740439;SVTYPE=DUP;SVLEN=6000 TR:VR 52:6 27:0 chr6 2362936 r_668_0 A A]chr6:167961721] . PASS SVTYPE=BND;MATEID=r_668_1 TR:VR 54:5 45:0 chr6 167961721 r_668_1 G G]chr6:2362936] . PASS SVTYPE=BND;MATEID=r_668_0 TR:VR 54:5 45:0 chr7 50594301 r_724 C . PASS END=57284273;SVTYPE=DEL;SVLEN=-6689972 TR:VR 54:10 40:0 chr8 116392902 r_772 G . Too_low_VAF END=116416000;SVTYPE=DUP;SVLEN=23098 TR:VR 193:3 27:0 chr8 70877099 r_755 C . PASS END=70882197;SVTYPE=DUP;SVLEN=5098 TR:VR 114:15 29:0 chrX 20311250 r_823_0 C C]chrX:45010569] . PASS SVTYPE=BND;MATEID=r_823_1 TR:VR 57:10 33:0 chrX 45010569 r_823_1 A A]chrX:20311250] . PASS SVTYPE=BND;MATEID=r_823_0 TR:VR 57:10 33:0 chr10 9502810 d_242 A . Too_small_size END=9502851;SVTYPE=DEL;SVLEN=-41;SVINSLEN=1;SVINSSEQ=G TR:VR 40:9 29:0 chr14 61580161 i_298 A . PASS END=61580182;SVTYPE=INS;SVINSLEN=92;SVINSSEQ=GAACATAATTTGAATAGCTACAATAAATGTTGAATAGGATTTCTGAAGAAGAAAATAAGGAAGAACAGTATTTGAAGAGACAAGTAGTAGAG TR:VR 38:4 17:0 chr14_GL000225v1_random 34337 d_487 A . Too_low_VAF END=35027;SVTYPE=DEL;SVLEN=-690;SVINSLEN=9;SVINSSEQ=TCGCAATAT TR:VR 608:4 391:1 chr17 22101594 i_438 A . PASS END=22101594;SVTYPE=INS;SVINSLEN=351;SVINSSEQ=AATTCATATTTATGAAATTCATAAATATGAGGTGGAGAGGAGAATGGCACAGGTCAAACGCTCATGAAGATCAGTGTCATATCTAAGGAAATAGGTTGTTACAGGTTAATAGAGCCCTAAGAACCCAAAGATAAGTGATCAATATTTGATTAGAATCCAGATATATCAAACTATGTGTCCCATCTATTCAAGTAGCTCTTTCTAGTACGCATGCTGTCTCTGTACCAAGAGGCAGTTGGGAACACACACACACACACACACACACACACACACACACACACACACACTCCTAAACTGGGAATACCAGTTCAGAAGCAGATCCCTGCAGTTTGGCTGCATATATTTTTGGAT TR:VR 40:3 24:0 chr17 60497159 r_385 G . Too_low_VAF END=61697067;SVTYPE=DEL;SVLEN=-1199908 TR:VR 152:6 30:0 chr17 81174268 r_412 C . PASS END=81181044;SVTYPE=DUP;SVLEN=6776 TR:VR 55:5 24:0 chr19 21722734 r_426_0 A AAAAAAA]chr2:174087503] . Too_low_VAF SVTYPE=BND;MATEID=r_426_1;SVINSLEN=6;SVINSSEQ=AAAAAA TR:VR 80:3 40:1 chr2 174087503 r_426_1 T TTTTTTT]chr19:21722734] . Too_low_VAF SVTYPE=BND;MATEID=r_426_0;SVINSLEN=6;SVINSSEQ=TTTTTT TR:VR 80:3 40:1 chr2 138369756 r_482 T . PASS END=138376175;SVTYPE=DUP;SVLEN=6419 TR:VR 29:4 22:0 chr2 73993160 r_459 G . PASS END=74841399;SVTYPE=DUP;SVLEN=848239 TR:VR 44:8 24:0 chr20 29096249 i_746 A . Too_low_VAF END=29096249;SVTYPE=INS;SVINSLEN=61;SVINSSEQ=TAGTAATATTTACATAGAATTCACATAGAATATTTACTTTCACAAAGTCTGAGGGACTTTC TR:VR 272:3 167:0 chr3 164095133 i_877 C . Too_small_size END=164095133;SVTYPE=INS;SVINSLEN=44;SVINSSEQ=AAATATTTAATGAGTACTGTGTACTTACTGTGTGCAAGGCACAA TR:VR 29:8 16:0 chr3 69674302 r_556_0 C ]chr7:16185235]G . PASS SVTYPE=BND;MATEID=r_556_1 TR:VR 66:7 30:0 chr7 16185235 r_556_1 G G[chr3:69674302[ . PASS SVTYPE=BND;MATEID=r_556_0 TR:VR 66:7 30:0 chr4 152866 r_586 T . PASS END=181408;SVTYPE=DUP;SVLEN=28542 TR:VR 69:6 33:0 chr5 37967993 r_636 A . PASS END=38001496;SVTYPE=DUP;SVLEN=33503 TR:VR 67:6 36:0 chr6 140100099 d_1410 C . PASS END=140100164;SVTYPE=DEL;SVLEN=-65 TR:VR 42:7 19:0 chr6 87712823 r_700 T . PASS END=113990498;SVTYPE=DEL;SVLEN=-26277675 TR:VR 48:18 40:0 chr8 116989996 r_773 T . PASS END=117028685;SVTYPE=DUP;SVLEN=38689 TR:VR 245:14 38:0 chr8 142088870 d_1560 C . Too_small_size END=142088911;SVTYPE=DEL;SVLEN=-41 TR:VR 85:23 19:0 chr10 131125342 d_305 T . PASS END=131125389;SVTYPE=DEL;SVLEN=-47 TR:VR 22:7 23:0 chr14 62550345 r_267_0 A [chr2:89799403[T . Too_low_VAF SVTYPE=BND;MATEID=r_267_1 TR:VR 124:5 77:0 chr2 89799403 r_267_1 T [chr14:62550345[T . Too_low_VAF SVTYPE=BND;MATEID=r_267_0 TR:VR 124:5 77:0 chr16 71840484 r_339_0 G ]chr4:27128935]T . PASS SVTYPE=BND;MATEID=r_339_1 TR:VR 74:10 53:0 chr4 27128935 r_339_1 T T[chr16:71840484[ . PASS SVTYPE=BND;MATEID=r_339_0 TR:VR 74:10 53:0 chr19 21787361 d_859 C . Too_small_size END=21787404;SVTYPE=DEL;SVLEN=-43 TR:VR 33:5 23:0 chr19 54737197 d_877 A . PASS END=54737520;SVTYPE=DEL;SVLEN=-323;SVINSLEN=3;SVINSSEQ=GCG TR:VR 36:4 28:0 chr2 139126501 d_1025 A . Too_small_size END=139126537;SVTYPE=DEL;SVLEN=-36 TR:VR 20:6 24:0 chr2 236526123 r_508 T . PASS END=237250569;SVTYPE=DUP;SVLEN=724446 TR:VR 65:11 46:0 chr3 164240699 d_1221 T . PASS END=164240775;SVTYPE=DEL;SVLEN=-76 TR:VR 25:6 12:0 chr3 69674429 r_557_0 G G[chr8:80720678[ . PASS SVTYPE=BND;MATEID=r_557_1 TR:VR 139:7 33:0 chr8 80720678 r_557_1 T ]chr3:69674429]T . PASS SVTYPE=BND;MATEID=r_557_0 TR:VR 139:7 33:0 chr4 156859008 r_614 T . PASS END=156880487;SVTYPE=DUP;SVLEN=21479 TR:VR 65:8 26:0 chr8 117159856 d_1538 G . Too_low_VAF END=117159903;SVTYPE=DEL;SVLEN=-47 TR:VR 107:3 14:0 chr8 72784509 r_756 A . Too_low_VAF END=72793328;SVTYPE=DUP;SVLEN=8819 TR:VR 157:3 24:0 chrUn_GL000220v1 115658 d_1624 C . Too_low_VAF END=116319;SVTYPE=DEL;SVLEN=-661;SVINSLEN=4;SVINSSEQ=CGGG TR:VR 475:18 576:0 chr1 244200370 r_86 A . Too_low_VAF END=244210132;SVTYPE=DUP;SVLEN=9762 TR:VR 66:3 27:0 chr10 96817784 d_296 T . PASS END=96817839;SVTYPE=DEL;SVLEN=-55 TR:VR 26:12 17:0 chr12 4657946 r_186_0 T ]chr17:46731760]T . PASS SVTYPE=BND;MATEID=r_186_1 TR:VR 78:6 47:0 chr17 46731760 r_186_1 T T[chr12:4657946[ . PASS SVTYPE=BND;MATEID=r_186_0 TR:VR 78:6 47:0 chr14_GL000225v1_random 113222 d_595 G . PASS END=113439;SVTYPE=DEL;SVLEN=-217;SVINSLEN=86;SVINSSEQ=GTTTACATCACCTGGGTGATCAGTGCAGAGATATGTCACAATGTCCCCACTGTAGCCAGAGCCTAGACAAAGTGTTACATCAGCTG TR:VR 177:9 127:0 chr17 81221934 r_413 C . Too_low_VAF END=81543180;SVTYPE=DEL;SVLEN=-321246 TR:VR 76:3 36:0 chr19 22642011 i_571 T . PASS END=22642011;SVTYPE=INS;SVINSLEN=89;SVINSSEQ=CTTGAACTCCCGACCTCAGGTGAGCTGCCCGCCTTGGCCTCCAAAGAGCTATTACAGGTGTGAGCCTCCACTCCTGGCCAGCCACTGCC TR:VR 42:8 14:0 chr19 54738094 i_591 C . PASS END=54738094;SVTYPE=INS;SVINSLEN=408;SVINSSEQ=AGCCTCTTGAGTAGATGGCATTACAGGTGTCTGCCACCAGGCACGGCTAATTTTTGAATGTTTAGCAGAGACACGGTTTCACTATGTTGGCCAGGCTGCTCTCAAACTCCTCATCTCAGTTGATTCGCCCACCTCGGCTTCCAAACATGCTGGGGGAAACTTGATTTTCTATAGCATTATGTTACTGGATATTTCCGTAAAATTTAAAATGAGGGAGGGACAGAGACAGAGAGGGAGCAAACTCCAGAGTTGGGACTCTGGAATCTTGGGTCATGAGACAAATTATAGATAAAACTATAAAAATCCAGAATTTACATGTGTGGTTTTTTGCTGATAAAGTACAATTCGGAAGATTGTAAATAATTGCATAATCCTTTCCTGGGAATTTAAATCATTTTAACTGGTTTT TR:VR 34:4 28:0 chr2 139361313 r_483 C . PASS END=140323746;SVTYPE=DUP;SVLEN=962433;SVINSLEN=3;SVINSSEQ=TTA TR:VR 48:6 40:0 chr2 237494148 r_509 T . PASS END=237521390;SVTYPE=DUP;SVLEN=27242 TR:VR 47:7 34:0 chr2 77257231 r_461 G . PASS END=77318976;SVTYPE=DUP;SVLEN=61745 TR:VR 62:9 33:0 chr3 166664369 r_577 C . PASS END=166672225;SVTYPE=DUP;SVLEN=7856 TR:VR 43:3 25:0 chr3 71026550 r_558 T . PASS END=71089848;SVTYPE=DEL;SVLEN=-63298 TR:VR 60:6 35:0 chr4 15728471 d_1238 A . PASS END=15728666;SVTYPE=DEL;SVLEN=-195 TR:VR 40:17 28:0 chr5 128378250 d_1362 A . PASS END=128378332;SVTYPE=DEL;SVLEN=-82 TR:VR 18:11 21:0 chr6 9063468 r_671 T . PASS END=9455372;SVTYPE=DUP;SVLEN=391904;SVINSLEN=39;SVINSSEQ=GACCCAGTTTTTCAAGTGTAGTCAATTTTATGCAGCCTC TR:VR 58:10 33:0 chr7 5456663 r_721 A . Too_low_VAF END=7280991;SVTYPE=DUP;SVLEN=1824328 TR:VR 71:3 36:0 chr1 13608923 r_4 C . PASS END=13676583;SVTYPE=DEL;SVLEN=-67660 TR:VR 53:4 27:0 chr1 181254847 r_65 C . PASS END=181318870;SVTYPE=DUP;SVLEN=64023 TR:VR 149:8 33:0 chr1 244962243 r_87_0 A [chr9:17656057[T . PASS SVTYPE=BND;MATEID=r_87_1 TR:VR 70:12 38:0 chr9 17656057 r_87_1 T [chr1:244962243[T . PASS SVTYPE=BND;MATEID=r_87_0 TR:VR 70:12 38:0 chr1 47273798 r_20 G . PASS END=47285134;SVTYPE=DUP;SVLEN=11336 TR:VR 39:5 25:0 chr11 55068356 i_177 T . PASS END=55068373;SVTYPE=INS;SVINSLEN=187;SVINSSEQ=GAGATGGTGGCACACATAACAAGGTTGTTACTAAGACAGCTTTCTTCCAGTTTTTATCCTGGGATATTAGCTTTTTGCCATTGGCCTCAATAAGCTCCCAAATGTTCATTCACAGAATTGAGAAAAAGGTGTTTCCAAAGTGTTGAATCAAAAGAAAACTTTAACCCTGTGAGAAGATTGTTCACAC TR:VR 52:5 32:0 chr12 4658172 r_187_0 T T]chr7:30535238] . PASS SVTYPE=BND;MATEID=r_187_1 TR:VR 67:7 48:0 chr7 30535238 r_187_1 T T]chr12:4658172] . PASS SVTYPE=BND;MATEID=r_187_0 TR:VR 67:7 48:0 chr16 72523794 r_340_0 T T[chr4:27128751[ . PASS SVTYPE=BND;MATEID=r_340_1 TR:VR 93:10 52:0 chr4 27128751 r_340_1 A ]chr16:72523794]A . PASS SVTYPE=BND;MATEID=r_340_0 TR:VR 93:10 52:0 chr17 61710071 r_386_0 T [chr17:71236605[T . Too_low_VAF SVTYPE=BND;MATEID=r_386_1 TR:VR 168:8 36:0 chr17 71236605 r_386_1 T [chr17:61710071[T . Too_low_VAF SVTYPE=BND;MATEID=r_386_0 TR:VR 168:8 36:0 chr17_KI270730v1_random 7867 i_508 T . PASS END=7868;SVTYPE=INS;SVINSLEN=137;SVINSSEQ=GGAACAAAACGGAACGGAACAGAAAGGAACGGAACGAAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGAAATGGAATGGAAAGTAATAGAATGGAATGGAACCGTTTGGAAGGGAATGGAATGG TR:VR 86:6 43:1 chr19 54738664 i_592 T . Too_small_size END=54738664;SVTYPE=INS;SVINSLEN=39;SVINSSEQ=TATGGGCCTGGAGTGGAGATCTGGGCCTGGAGGGGATAT TR:VR 34:5 29:0 chr2 140852663 d_1026 T . Too_small_size END=140852705;SVTYPE=DEL;SVLEN=-42 TR:VR 19:3 20:0 chr20 9702816 r_512 A . PASS END=9708053;SVTYPE=DUP;SVLEN=5237 TR:VR 61:6 28:0 chr22 36289693 r_541 T . PASS END=36296564;SVTYPE=DUP;SVLEN=6871 TR:VR 40:7 21:0 chr3 75669597 r_559_0 G GTT[chrY:11309246[ . Too_low_VAF SVTYPE=BND;MATEID=r_559_1;SVINSLEN=2;SVINSSEQ=TT TR:VR 602:5 520:1 chrY 11309246 r_559_1 G ]chr3:75669597]AAG . Too_low_VAF SVTYPE=BND;MATEID=r_559_0;SVINSLEN=2;SVINSSEQ=AA TR:VR 602:5 520:1 chr5 42033066 d_1333 C . PASS END=42033114;SVTYPE=DEL;SVLEN=-48 TR:VR 29:6 23:0 chr6 142873884 r_708 A . PASS END=142877539;SVTYPE=DUP;SVLEN=3655 TR:VR 46:6 23:0 chr6 94436710 d_1405 G . PASS END=94436762;SVTYPE=DEL;SVLEN=-52 TR:VR 16:10 29:0 chr8 118301666 r_774_0 C C]chr8:124393987] . Too_low_VAF SVTYPE=BND;MATEID=r_774_1 TR:VR 191:7 37:0 chr8 124393987 r_774_1 T T]chr8:118301666] . Too_low_VAF SVTYPE=BND;MATEID=r_774_0 TR:VR 191:7 37:0 chr1 18153251 r_10 C . PASS END=40928078;SVTYPE=DUP;SVLEN=22774827 TR:VR 50:4 37:0 chr1 47463854 i_18 A . PASS END=47463854;SVTYPE=INS;SVINSLEN=82;SVINSSEQ=TTTTTTTTCCACTTGTCAAGAGCCAGAAAAAAGCTGAAGGTATAAAGTTCAGAACTGGCAGGGCTGGAGGGCAGACATGATT TR:VR 35:9 18:0 chr10 97337980 d_298 T . Too_small_size END=97338018;SVTYPE=DEL;SVLEN=-38 TR:VR 31:7 29:0 chr12 47054587 r_201 C . PASS END=47061899;SVTYPE=DUP;SVLEN=7312 TR:VR 54:15 27:0 chr14 64166034 r_270 T . Too_low_VAF END=65101909;SVTYPE=DUP;SVLEN=935875 TR:VR 64:3 42:0 chr16 72889871 r_341 A . PASS END=72905458;SVTYPE=DUP;SVLEN=15587 TR:VR 58:5 18:0 chr17_KI270730v1_random 87563 d_823 G . Too_low_VAF END=88216;SVTYPE=DEL;SVLEN=-653;SVINSLEN=3;SVINSSEQ=ATG TR:VR 214:4 119:1 chr19 23395586 r_427 G . PASS END=23423392;SVTYPE=DUP;SVLEN=27806 TR:VR 72:7 41:0 chr19 54755881 d_878 G . PASS END=54755871;SVTYPE=INS;SVINSLEN=84;SVINSSEQ=ATTGGAGATATGGGCCCAGGGTGGAGATCTGAGCCTGGATTGGAGATATGGGCCTGGATTGGCGATATGGGCTTAGGGTGGAAC TR:VR 38:8 26:0 chr22 38057981 d_1170 C . PASS END=38068827;SVTYPE=DEL;SVLEN=-10846 TR:VR 26:3 23:0 chr3 78175611 d_1202 C . Too_small_size END=78175655;SVTYPE=DEL;SVLEN=-44 TR:VR 26:10 22:0 chr4 158520847 d_1295 A . PASS END=158521235;SVTYPE=DEL;SVLEN=-388 TR:VR 54:12 24:0 chr5 43086249 r_637_0 T [chr7:80914419[TTTTTTTTTTTTTTTTTTTTTTTA . PASS SVTYPE=BND;MATEID=r_637_1;SVINSLEN=23;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTT TR:VR 68:4 44:1 chr7 80914419 r_637_1 A [chr5:43086249[AAAAAAAAAAAAAAAAAAAAAAAA . PASS SVTYPE=BND;MATEID=r_637_0;SVINSLEN=23;SVINSSEQ=AAAAAAAAAAAAAAAAAAAAAAA TR:VR 68:4 44:1 chr6 146162554 r_709_0 C [chr6:146615842[T . PASS SVTYPE=BND;MATEID=r_709_1 TR:VR 103:12 27:0 chr6 146615842 r_709_1 T [chr6:146162554[T . PASS SVTYPE=BND;MATEID=r_709_0 TR:VR 103:12 27:0 chr6 9455113 r_672 T . PASS END=9683922;SVTYPE=DUP;SVLEN=228809 TR:VR 62:10 33:0 chr8 118552926 d_1539 T . PASS END=118553011;SVTYPE=DEL;SVLEN=-85 TR:VR 105:15 18:0 chr1 18180072 r_11 A . PASS END=40928113;SVTYPE=DEL;SVLEN=-22748041 TR:VR 60:5 40:0 chr1 48092531 r_21 A . PASS END=48723720;SVTYPE=DUP;SVLEN=631189;SVINSLEN=16;SVINSSEQ=GTTATATAACAAGTAC TR:VR 63:4 42:0 chr10 132791193 r_137 C . PASS END=132806046;SVTYPE=DUP;SVLEN=14853 TR:VR 47:3 27:0 chr10 98605024 r_128 A . PASS END=98608371;SVTYPE=DUP;SVLEN=3347;SVINSLEN=5;SVINSSEQ=CACTT TR:VR 30:5 30:0 chr12 47850933 r_202_0 A ]chr9:127667158]C . Too_low_VAF SVTYPE=BND;MATEID=r_202_1 TR:VR 81:4 36:0 chr9 127667158 r_202_1 C C[chr12:47850933[ . Too_low_VAF SVTYPE=BND;MATEID=r_202_0 TR:VR 81:4 36:0 chr14 64493779 r_271 G . PASS END=64503661;SVTYPE=DUP;SVLEN=9882 TR:VR 67:15 26:0 chr16 73280102 d_727 C . Too_small_size END=73280139;SVTYPE=DEL;SVLEN=-37 TR:VR 32:5 17:0 chr4 159696565 d_1296 A . PASS END=159696631;SVTYPE=DEL;SVLEN=-66 TR:VR 47:7 18:0 chr5 43709804 r_638 C . PASS END=43716833;SVTYPE=DUP;SVLEN=7029 TR:VR 44:3 16:0 chr6 146169342 r_710_0 A ATATATATAAAAACATATTTATATATAT]chr6:146633333] . PASS SVTYPE=BND;MATEID=r_710_1;SVINSLEN=27;SVINSSEQ=TATATATAAAAACATATTTATATATAT TR:VR 100:6 30:0 chr6 146633333 r_710_1 T TATATATATAAATATGTTTTTATATATA]chr6:146169342] . PASS SVTYPE=BND;MATEID=r_710_0;SVINSLEN=27;SVINSSEQ=ATATATATAAATATGTTTTTATATATA TR:VR 100:6 30:0 chr6 25733746 r_681_0 T T]chr6:166711231] . PASS SVTYPE=BND;MATEID=r_681_1 TR:VR 86:10 37:0 chr6 166711231 r_681_1 T T]chr6:25733746] . PASS SVTYPE=BND;MATEID=r_681_0 TR:VR 86:10 37:0 chrX 27738307 r_824 C . PASS END=27742131;SVTYPE=DUP;SVLEN=3824 TR:VR 37:3 19:0 chr1 182654727 i_44 T . PASS END=182654779;SVTYPE=INS;SVINSLEN=294;SVINSSEQ=CCCTGGCATCAAAATAGGATCCTACAGCCCATCTGCTCCTGTAATTCCTACTGGCTTTAAGAATGTGTGTTTCTGTCTTGTAAGTCACCTCTCATCCACCAGCCCAGGGGTAGTGATTTATTCCAGCCGAGTGGCACTGGGGAGGAGCCTGCCTTTGGGGAACAGAAGGGGAAGCCAAGAGGGACAGAGAGGCTTGCTCTAGGCGGGTGGGCCTGTGGTCAAGGCTGTGCCTGGAGAGGCTGCTGCAAGATGAGACAGCTGCCTGCAGGTTGGAATCTCTCCAGGGGCCGGTGA TR:VR 69:4 18:0 chr10 98646494 r_129_0 A A[chr7:147639464[ . Too_low_VAF SVTYPE=BND;MATEID=r_129_1 TR:VR 62:3 34:0 chr7 147639464 r_129_1 G ]chr10:98646494]G . Too_low_VAF SVTYPE=BND;MATEID=r_129_0 TR:VR 62:3 34:0 chr12 129088686 i_219 C . PASS END=129088687;SVTYPE=INS;SVINSLEN=548;SVINSSEQ=CCTGACCGGGTGTCCTCCATGACCGGGTGTCCTCCATGACCGGGGTGTCCTCCATGACCGGGTGTCCTCCATGACCGGGGTGTCCTCCCTGACCGGGGTGTCCTCTATGACCGGGTGTCCTCCCTGACCGGGATGTCCTCCCTGACCGGGGGTGTCCTCCATGACCGGGGTGTCCTCCATGACCGGGGTGTCCTCCATGACCGGGGTGTCCTCCCTGACCGGGGTGTCCCCATGACCGGGGTGTCCTCCATGACCGGGTGTCCTCCATGACCGGGATGTCCTCCATGACCGGGTGTCCTCCATGACCGGGTGTCCTCCATGACCGGGGGTGTCCTCCATGACCGGGTGTCCTCCATGACCGGGTGTCCTCCATGACCGGGGTGTCCTCCATGACCGGGGTGTCCTCCCTGACCGGGGCTGTCCTCCTGGACCCGGTGTCCTCCATGACCCGGTGTCCTCCCTGACCGGAGTCCTCCACACCGGGGTGTCCTCCATGACCGGGGCGTCCTCCCTGACCGGGGTGTCCTCCCTGACCGGGGTGTCCTCCA TR:VR 43:3 23:0 chr12 47861178 r_203_0 G G[chr9:127666967[ . Too_low_VAF SVTYPE=BND;MATEID=r_203_1 TR:VR 83:4 32:0 chr9 127666967 r_203_1 T ]chr12:47861178]T . Too_low_VAF SVTYPE=BND;MATEID=r_203_0 TR:VR 83:4 32:0 chr14 65303027 r_272 G . PASS END=65314181;SVTYPE=DUP;SVLEN=11154 TR:VR 48:5 20:0 chr15 29558694 r_299_0 C ]chr3:126864966]TTGTCTTCCACCCCTCCTCCACCTCCTCCACCTGGTCCTCCACCTCCTCCTCCCTCTTCCACCTCCTCCAACTCTTCCCC . Too_low_VAF SVTYPE=BND;MATEID=r_299_1;SVINSLEN=79;SVINSSEQ=TTGTCTTCCACCCCTCCTCCACCTCCTCCACCTGGTCCTCCACCTCCTCCTCCCTCTTCCACCTCCTCCAACTCTTCCC TR:VR 125:3 62:0 chr3 126864966 r_299_1 C CGGGAAGAGTTGGAGGAGGTGGAAGAGGGAGGAGGAGGTGGAGGACCAGGTGGAGGAGGTGGAGGAGGGGTGGAAGACAA[chr15:29558694[ . Too_low_VAF SVTYPE=BND;MATEID=r_299_0;SVINSLEN=79;SVINSSEQ=GGGAAGAGTTGGAGGAGGTGGAAGAGGGAGGAGGAGGTGGAGGACCAGGTGGAGGAGGTGGAGGAGGGGTGGAAGACAA TR:VR 125:3 62:0 chr16 77221804 d_728 C . PASS END=77221939;SVTYPE=DEL;SVLEN=-135 TR:VR 42:7 31:0 chr19 55172485 d_879 A . PASS END=55172698;SVTYPE=DEL;SVLEN=-213 TR:VR 26:13 20:0 chr2 143117813 d_1027 C . Too_small_size END=143117849;SVTYPE=DEL;SVLEN=-36 TR:VR 20:7 24:0 chr3 79603534 d_1203 T . PASS END=79603583;SVTYPE=DEL;SVLEN=-49 TR:VR 24:9 15:0 chr4 159832324 r_615 A . PASS END=159837971;SVTYPE=DUP;SVLEN=5647 TR:VR 58:5 19:0 chr4 52374209 r_595 A . PASS END=52382527;SVTYPE=DUP;SVLEN=8318 TR:VR 51:5 24:0 chr5 134359726 d_1364 G . PASS END=134359791;SVTYPE=DEL;SVLEN=-65 TR:VR 38:7 16:0 chr6 146988799 d_1411 G . Too_small_size END=146988845;SVTYPE=DEL;SVLEN=-46 TR:VR 39:8 20:0 chr6 26947664 r_682 T . PASS END=82298316;SVTYPE=DUP;SVLEN=55350652 TR:VR 58:5 48:0 chr6 9681853 r_673_0 T [chr6:10313309[T . PASS SVTYPE=BND;MATEID=r_673_1 TR:VR 56:8 39:0 chr6 10313309 r_673_1 T [chr6:9681853[T . PASS SVTYPE=BND;MATEID=r_673_0 TR:VR 56:8 39:0 chr8 76549378 d_1519 T . Too_small_size END=76549423;SVTYPE=DEL;SVLEN=-45 TR:VR 83:9 23:0 chr9 19083785 d_1580 G . Too_small_size END=19083826;SVTYPE=DEL;SVLEN=-41 TR:VR 32:6 30:0 chrX 32101207 d_1735 G . PASS END=32105155;SVTYPE=DEL;SVLEN=-3948 TR:VR 16:6 16:0 chr1 184397204 r_66 T . Too_low_VAF END=185287349;SVTYPE=DUP;SVLEN=890145 TR:VR 164:5 49:0 chr1 245976139 i_67 C . Too_low_VAF END=245976139;SVTYPE=INS;SVINSLEN=144;SVINSSEQ=CCAGGAAAGCCATCGTCTCTAGCCCAGGGAAAGCCATCGTCTCCTAGCCCAGGAAAGCCATCGTCTCCGGCTCTAGGGAAAGCCATCGTCTCCGGCCCAGGGAAAGCCATCGTCTCTAGCCTAGGGAAAGCCATCGTCTCTAGC TR:VR 71:3 16:0 chr10 98646512 r_130_0 A ]chr7:147639466]G . PASS SVTYPE=BND;MATEID=r_130_1 TR:VR 62:12 34:0 chr7 147639466 r_130_1 G G[chr10:98646512[ . PASS SVTYPE=BND;MATEID=r_130_0 TR:VR 62:12 34:0 chr14_GL000225v1_random 39538 d_493 G . Too_low_VAF END=40387;SVTYPE=DEL;SVLEN=-849;SVINSLEN=32;SVINSSEQ=CTGGGATATGTCACAAAGCACCCTGTAGGCAG TR:VR 635:4 426:1 chr15 31430273 r_300_0 A [chrX:14338775[T . PASS SVTYPE=BND;MATEID=r_300_1 TR:VR 69:12 42:0 chrX 14338775 r_300_1 T [chr15:31430273[T . PASS SVTYPE=BND;MATEID=r_300_0 TR:VR 69:12 42:0 chr22 41163742 d_1171 A . PASS END=41163951;SVTYPE=DEL;SVLEN=-209 TR:VR 22:8 28:0 chr4 52753776 r_596 G . PASS END=186361132;SVTYPE=DEL;SVLEN=-133607356 TR:VR 48:8 54:0 chr5 135534639 i_1040 A . PASS END=135534639;SVTYPE=INS;SVINSLEN=143;SVINSSEQ=GCTTGATTATTTTAACATAGGCAGAGAGTATTTATTCATTAATTCAACTAGTAATTTTTTTTTTTTCGAGAGAGGATCTTGCTCTATTGCCCAGGCTGGAGTGCAGTGGCATGATCATGGCTCACTGCAGCCTCGACCTCCTG TR:VR 28:7 18:0 chr6 147113976 r_711 T . PASS END=147135957;SVTYPE=DUP;SVLEN=21981 TR:VR 72:6 36:0 chr6 26958723 r_683 G . Too_low_VAF END=82365465;SVTYPE=DEL;SVLEN=-55406742 TR:VR 61:3 55:0 chr6 99003588 r_701 A . PASS END=99021357;SVTYPE=DUP;SVLEN=17769 TR:VR 29:5 31:0 chr8 119740145 r_776 A . Too_low_VAF END=124534098;SVTYPE=DUP;SVLEN=4793953 TR:VR 236:5 43:0 chr8 77539665 r_758 G . Too_low_VAF END=77541903;SVTYPE=DUP;SVLEN=2238 TR:VR 92:4 22:0 chr9 21596343 r_795_0 T ]chrX:666325]C . Too_low_VAF SVTYPE=BND;MATEID=r_795_1 TR:VR 61:3 41:0 chrX 666325 r_795_1 C C[chr9:21596343[ . Too_low_VAF SVTYPE=BND;MATEID=r_795_0 TR:VR 61:3 41:0 chr1 186671634 r_67 T . Too_low_VAF END=186685905;SVTYPE=DUP;SVLEN=14271 TR:VR 124:6 12:0 chr1 53857955 d_16 T . PASS END=53858054;SVTYPE=DEL;SVLEN=-99 TR:VR 31:3 15:0 chr11 101654988 d_341 T . Too_small_size END=101655028;SVTYPE=DEL;SVLEN=-40 TR:VR 29:18 23:0 chr11 58061014 r_150 C . PASS END=58071091;SVTYPE=DEL;SVLEN=-10077 TR:VR 46:7 29:0 chr15 31430562 r_301_0 C C]chrX:15177724] . PASS SVTYPE=BND;MATEID=r_301_1 TR:VR 58:12 39:0 chrX 15177724 r_301_1 T T]chr15:31430562] . PASS SVTYPE=BND;MATEID=r_301_0 TR:VR 58:12 39:0 chr2 147752086 d_1028 A . Too_small_size END=147752124;SVTYPE=DEL;SVLEN=-38 TR:VR 23:6 28:0 chr3 84869539 d_1204 T . PASS END=84869587;SVTYPE=DEL;SVLEN=-48 TR:VR 29:5 16:0 chr4 163078176 r_616_0 T T]chr4:186446820] . PASS SVTYPE=BND;MATEID=r_616_1 TR:VR 66:7 33:0 chr4 186446820 r_616_1 T T]chr4:163078176] . PASS SVTYPE=BND;MATEID=r_616_0 TR:VR 66:7 33:0 chr6 147411132 d_1412 T . Too_small_size END=147411169;SVTYPE=DEL;SVLEN=-37 TR:VR 35:9 16:0 chr6 2837815 d_1380 G . Too_small_size END=2837853;SVTYPE=DEL;SVLEN=-38 TR:VR 31:4 23:0 chr8 81280822 d_1520 T . Too_small_size END=81280863;SVTYPE=DEL;SVLEN=-41 TR:VR 96:10 22:0 chr9 21663731 r_796_0 G G[chrX:619513[ . PASS SVTYPE=BND;MATEID=r_796_1 TR:VR 58:9 34:0 chrX 619513 r_796_1 G ]chr9:21663731]G . PASS SVTYPE=BND;MATEID=r_796_0 TR:VR 58:9 34:0 chr1 55036973 i_19 A . PASS END=55036973;SVTYPE=INS;SVINSLEN=240;SVINSSEQ=AGAGTTAATCCTCAAACGGCATCTGCACAAATTGGAGGTGGGTGGTTTCTGGATCTTTTATCTAAGAATATTTTAATCTTGGGTTCTCATTGTTATGACAGTTCAAATTAAAATCACGTAAGTGTATTCTGAATAACACTTTAGAACTGAGAACTATCATGTCATTTCAGTGACTATGTTTTTTTCAAGTAATTCTACTTCCAATGGTATAGTCCCACTGAAAAAAAAAGAACTGAAGTA TR:VR 41:22 23:0 chr12 129089426 i_222 G . PASS END=129089426;SVTYPE=INS;SVINSLEN=215;SVINSSEQ=GGTGTCCTCCATGACCGGGGCGTCCTCCATGAGCCGGGCGTCCTCCATGACCGGGATGTCCTCCATGACCGGGTGTCCTCCATGACCGGGGTGTCCTCCATGACCGGGATGTCCTCCCTGACCGGGTGTCCTCCATGACCGGGGCGTCCTCCATGACCGGGTGTCCTCCATGACCGGGGTGTCCTCCATGACCGGGGTGTCCTCTCTTCTCCCAG TR:VR 41:9 23:0 chr14 66816688 r_273 T . PASS END=66827837;SVTYPE=DUP;SVLEN=11149 TR:VR 61:4 33:0 chr16 79927715 r_342 G . PASS END=89250693;SVTYPE=DEL;SVLEN=-9322978 TR:VR 59:12 30:0 chr2 86680417 r_462 T . PASS END=86690910;SVTYPE=DUP;SVLEN=10493 TR:VR 43:13 42:0 chr22 45739476 d_1172 G . PASS END=45739526;SVTYPE=DEL;SVLEN=-50 TR:VR 26:5 14:0 chr3 171139315 r_578 G . PASS END=171363399;SVTYPE=DUP;SVLEN=224084 TR:VR 61:8 40:0 chr3 85077561 r_561_0 C [chrX:142648676[G . PASS SVTYPE=BND;MATEID=r_561_1 TR:VR 72:4 33:0 chrX 142648676 r_561_1 G [chr3:85077561[G . PASS SVTYPE=BND;MATEID=r_561_0 TR:VR 72:4 33:0 chr4 163078218 r_617 T . PASS END=186447053;SVTYPE=DUP;SVLEN=23368835;SVINSLEN=3;SVINSSEQ=TAC TR:VR 66:5 33:0 chr5 14095779 r_625 A . PASS END=14138582;SVTYPE=DUP;SVLEN=42803 TR:VR 69:11 30:0 chr6 148598203 d_1413 A . Too_small_size END=148598238;SVTYPE=DEL;SVLEN=-35 TR:VR 34:7 19:0 chr6 30287604 r_684 G . PASS END=30305645;SVTYPE=DUP;SVLEN=18041 TR:VR 59:9 42:0 chr7 105346053 r_734 A . PASS END=105370571;SVTYPE=DUP;SVLEN=24518 TR:VR 28:3 29:0 chrX 38437035 d_1736 T . PASS END=38437454;SVTYPE=DEL;SVLEN=-419 TR:VR 31:11 13:0 chr1 55541059 d_17 A . Too_small_size END=55541102;SVTYPE=DEL;SVLEN=-43 TR:VR 30:5 20:0 chr11 10295453 r_140 T . PASS END=10297768;SVTYPE=DUP;SVLEN=2315 TR:VR 27:5 20:0 chr11 58420680 r_151 T . PASS END=59232666;SVTYPE=DUP;SVLEN=811986;SVINSLEN=28;SVINSSEQ=AATATCACAATTAAATATCACAATTAAA TR:VR 93:6 48:0 chr12 49548448 i_206 G . PASS END=49548448;SVTYPE=INS;SVINSLEN=76;SVINSSEQ=GGGAGGGAGGGCCTTCTGGAGTTGATAGGCTGAGTGGTTTGTGTGGCTGTGGGGATGGATGAGACTGAATGGGGAG TR:VR 44:6 12:0 chr13 19873191 r_236 T . PASS END=19883095;SVTYPE=DUP;SVLEN=9904 TR:VR 47:6 25:0 chr14 68576518 r_274 C . PASS END=68749639;SVTYPE=DUP;SVLEN=173121 TR:VR 48:6 38:0 chr15 38403750 d_642 G . PASS END=38404106;SVTYPE=DEL;SVLEN=-356 TR:VR 32:3 26:0 chr16 8054898 d_655 T . Too_small_size END=8054933;SVTYPE=DEL;SVLEN=-35 TR:VR 38:10 18:0 chr19 651702 r_421_0 A ]chr2:73611282]G . PASS SVTYPE=BND;MATEID=r_421_1 TR:VR 65:12 36:0 chr2 73611282 r_421_1 G G[chr19:651702[ . PASS SVTYPE=BND;MATEID=r_421_0 TR:VR 65:12 36:0 chr2 150929167 r_484 T . PASS END=150938291;SVTYPE=DUP;SVLEN=9124 TR:VR 38:4 23:0 chr2 239527539 d_1042 C . PASS END=239527656;SVTYPE=DEL;SVLEN=-117;SVINSLEN=53;SVINSSEQ=ACGAGAGTGCACTGTCACAAGGGTGCACCATCACCAAAGGTGTGCCATCACGA TR:VR 37:6 16:0 chr3 174165002 r_579 A . PASS END=174701644;SVTYPE=DUP;SVLEN=536642 TR:VR 72:5 36:0 chr3 85084685 r_562_0 A A]chrX:142649019] . PASS SVTYPE=BND;MATEID=r_562_1 TR:VR 76:4 36:0 chrX 142649019 r_562_1 T T]chr3:85084685] . PASS SVTYPE=BND;MATEID=r_562_0 TR:VR 76:4 36:0 chr4 59522106 d_1272 T . PASS END=59522156;SVTYPE=DEL;SVLEN=-50 TR:VR 33:3 13:0 chr5 144614152 d_1365 A . Too_small_size END=144614198;SVTYPE=DEL;SVLEN=-46 TR:VR 50:9 12:0 chr6 149410065 r_712 A . PASS END=149440538;SVTYPE=DUP;SVLEN=30473 TR:VR 68:8 29:0 chr7 11237100 d_1441 C . Too_small_size END=11237137;SVTYPE=DEL;SVLEN=-37 TR:VR 29:14 23:0 chr8 83326679 d_1522 A . PASS END=83327025;SVTYPE=DEL;SVLEN=-346 TR:VR 95:8 16:0 chr9 28189212 i_1285 T . PASS END=28189213;SVTYPE=INS;SVINSLEN=413;SVINSSEQ=GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAAGGGAGGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAAGGGAGGAAGGGAGGGAGGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAAGGGAGGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAAGGGAGGAAGGGAGGGAGGAAGGAAGGAAGGGAGGGAGGAAGGAAGGAA TR:VR 31:6 15:0 chr1 246025342 i_71 A . PASS END=246025411;SVTYPE=INS;SVINSLEN=246;SVINSSEQ=GTGGACAGCATCTATGTTCAGGAAGACAGATACAGCAAGTGGACAGCATCTAGGAAGGGAGATACAGGAAGTGGACAGCATCTAGGAAGGAGATACAGGAAGTGGACAGCATCTAGGAAGAGATACAGCAAGTGGACAGCATCTAGGTAAGGGAGAGATACAGCAAGTGGACAGCATCTAGGAAGACAGATACAGCAAGTGGACAGCATCTAGGAAGGAGCCATACGTAAAAGTGAAACAGCATTC TR:VR 68:5 27:0 chr1 55893367 d_18 T . PASS END=55893445;SVTYPE=DEL;SVLEN=-78 TR:VR 22:4 25:0 chr11 103113391 d_342 G . Too_small_size END=103113429;SVTYPE=DEL;SVLEN=-38 TR:VR 24:11 20:0 chr12 51070574 d_360 T . PASS END=51070875;SVTYPE=DEL;SVLEN=-301 TR:VR 38:3 19:0 chr13 22243517 r_237_0 G ]chr4:123339241]G . PASS SVTYPE=BND;MATEID=r_237_1 TR:VR 77:12 45:0 chr4 123339241 r_237_1 G G[chr13:22243517[ . PASS SVTYPE=BND;MATEID=r_237_0 TR:VR 77:12 45:0 chr14 68679566 d_458 A . PASS END=68679633;SVTYPE=DEL;SVLEN=-67 TR:VR 22:9 23:0 chr15 39414613 r_303 C . PASS END=39426280;SVTYPE=DUP;SVLEN=11667 TR:VR 31:3 25:0 chr17 61727670 r_387_0 G G]chr17:71159833] . Too_low_VAF SVTYPE=BND;MATEID=r_387_1 TR:VR 153:6 24:0 chr17 71159833 r_387_1 C C]chr17:61727670] . Too_low_VAF SVTYPE=BND;MATEID=r_387_0 TR:VR 153:6 24:0 chr4 165183961 r_618_0 T T]chr4:165466915] . PASS SVTYPE=BND;MATEID=r_618_1 TR:VR 91:18 41:0 chr4 165466915 r_618_1 A A]chr4:165183961] . PASS SVTYPE=BND;MATEID=r_618_0 TR:VR 91:18 41:0 chr6 149685352 r_713_0 T [chr6:149703072[C . PASS SVTYPE=BND;MATEID=r_713_1 TR:VR 68:7 33:0 chr6 149703072 r_713_1 C [chr6:149685352[C . PASS SVTYPE=BND;MATEID=r_713_0 TR:VR 68:7 33:0 chr7 11709328 d_1442 T . PASS END=11709392;SVTYPE=DEL;SVLEN=-64 TR:VR 46:8 19:0 chr8 121191500 r_777 A . Too_low_VAF END=121211890;SVTYPE=DUP;SVLEN=20390 TR:VR 197:8 33:0 chr9 30001526 d_1581 T . PASS END=30001746;SVTYPE=DEL;SVLEN=-220 TR:VR 29:7 15:0 chrX 104983432 i_1404 A . PASS END=104983432;SVTYPE=INS;SVINSLEN=120;SVINSSEQ=TATTATATTATTAGATTTATAATATTATATAATATTAGATACATAATATTATATAATATTATATTAAGATATATAATATTATATAATATTATAATTAAATACATAATATTATATAATATT TR:VR 40:8 18:0 chr1 189810522 r_68_0 T [chr9:6636258[CC . PASS SVTYPE=BND;MATEID=r_68_1;SVINSLEN=1;SVINSSEQ=C TR:VR 104:12 41:0 chr9 6636258 r_68_1 C [chr1:189810522[GC . PASS SVTYPE=BND;MATEID=r_68_0;SVINSLEN=1;SVINSSEQ=G TR:VR 104:12 41:0 chr12 53263569 r_204 A . PASS END=53273724;SVTYPE=DUP;SVLEN=10155 TR:VR 61:9 26:0 chr13 22429251 r_238_0 A A[chr4:123339272[ . PASS SVTYPE=BND;MATEID=r_238_1 TR:VR 75:9 41:0 chr4 123339272 r_238_1 A ]chr13:22429251]A . PASS SVTYPE=BND;MATEID=r_238_0 TR:VR 75:9 41:0 chr14 70766481 r_275 C . PASS END=70773792;SVTYPE=DUP;SVLEN=7311 TR:VR 39:5 18:0 chr15 45624225 r_304_0 C C[chr8:84952545[ . Too_low_VAF SVTYPE=BND;MATEID=r_304_1 TR:VR 120:3 33:0 chr8 84952545 r_304_1 T ]chr15:45624225]T . Too_low_VAF SVTYPE=BND;MATEID=r_304_0 TR:VR 120:3 33:0 chr17 61730752 r_388 G . Too_low_VAF END=61733820;SVTYPE=DUP;SVLEN=3068;SVINSLEN=32;SVINSSEQ=CTCTGGGCACCACTAGCTGACATTGCAGCCTT TR:VR 96:3 10:0 chr19 674411 r_422_0 T T]chr19:1260323] . PASS SVTYPE=BND;MATEID=r_422_1 TR:VR 51:5 30:0 chr19 1260323 r_422_1 G G]chr19:674411] . PASS SVTYPE=BND;MATEID=r_422_0 TR:VR 51:5 30:0 chr3 86005696 r_563 T . PASS END=86019689;SVTYPE=DUP;SVLEN=13993 TR:VR 46:6 28:0 chr6 1497545 d_1379 G . Too_small_size END=1497591;SVTYPE=DEL;SVLEN=-46 TR:VR 47:3 22:0 chr7 117146198 d_1467 G . PASS END=117146445;SVTYPE=DEL;SVLEN=-247 TR:VR 15:5 13:0 chr8 142971700 r_792 G . PASS END=142975073;SVTYPE=DUP;SVLEN=3373 TR:VR 98:18 20:0 chr9 31324071 d_1582 A . Too_small_size END=31324116;SVTYPE=DEL;SVLEN=-45 TR:VR 32:6 19:0 chr1 189810738 r_69_0 A A]chr3:142096629] . PASS SVTYPE=BND;MATEID=r_69_1 TR:VR 123:12 34:0 chr3 142096629 r_69_1 T T]chr1:189810738] . PASS SVTYPE=BND;MATEID=r_69_0 TR:VR 123:12 34:0 chr12 54195615 d_361 C . PASS END=54195905;SVTYPE=DEL;SVLEN=-290 TR:VR 33:10 23:0 chr14 71799177 d_459 A . PASS END=71799232;SVTYPE=DEL;SVLEN=-55 TR:VR 54:19 21:0 chr15 48442285 r_305 T . PASS END=48447612;SVTYPE=DUP;SVLEN=5327 TR:VR 37:9 20:0 chr2 152742755 r_485_0 A [chr6:9432050[A . PASS SVTYPE=BND;MATEID=r_485_1 TR:VR 68:11 33:0 chr6 9432050 r_485_1 A [chr2:152742755[A . PASS SVTYPE=BND;MATEID=r_485_0 TR:VR 68:11 33:0 chr3 176132641 r_580_0 G G]chr3:176142570] . PASS SVTYPE=BND;MATEID=r_580_1 TR:VR 51:9 26:0 chr3 176142570 r_580_1 G G]chr3:176132641] . PASS SVTYPE=BND;MATEID=r_580_0 TR:VR 51:9 26:0 chr6 149792952 r_714 G . PASS END=149826584;SVTYPE=DUP;SVLEN=33632 TR:VR 83:7 32:0 chr8 122531884 r_778 A . Too_low_VAF END=122552868;SVTYPE=DUP;SVLEN=20984;SVINSLEN=9;SVINSSEQ=TTAGATAGG TR:VR 180:6 36:0 chr1 192293586 d_202 C . Too_small_size END=192293625;SVTYPE=DEL;SVLEN=-39 TR:VR 80:9 15:0 chr1 6719767 d_12 C . Too_small_size END=6719803;SVTYPE=DEL;SVLEN=-36 TR:VR 37:16 21:0 chr11 105832198 d_344 A . Too_small_size END=105832238;SVTYPE=DEL;SVLEN=-40 TR:VR 24:7 19:0 chr12 54916852 r_205_0 T ]chr15:29795430]A . Too_low_VAF SVTYPE=BND;MATEID=r_205_1 TR:VR 61:3 36:0 chr15 29795430 r_205_1 A A[chr12:54916852[ . Too_low_VAF SVTYPE=BND;MATEID=r_205_0 TR:VR 61:3 36:0 chr13 25079709 d_396 T . PASS END=25079927;SVTYPE=DEL;SVLEN=-218 TR:VR 26:10 19:0 chr14 73565416 r_276 T . PASS END=73625028;SVTYPE=DUP;SVLEN=59612 TR:VR 83:10 37:0 chr17 27091849 r_359_0 T TC[chr2:131733396[ . PASS SVTYPE=BND;MATEID=r_359_1;SVINSLEN=1;SVINSSEQ=C TR:VR 96:5 42:0 chr2 131733396 r_359_1 T ]chr17:27091849]GT . PASS SVTYPE=BND;MATEID=r_359_0;SVINSLEN=1;SVINSSEQ=G TR:VR 96:5 42:0 chr17 61854574 r_389 G . PASS END=74323924;SVTYPE=DEL;SVLEN=-12469350 TR:VR 172:12 26:0 chr3 178656054 r_581 A . PASS END=178658157;SVTYPE=DUP;SVLEN=2103 TR:VR 31:6 24:0 chr3 86462343 r_564 T . PASS END=86552993;SVTYPE=DUP;SVLEN=90650 TR:VR 60:9 28:0 chr4 65943354 r_597_0 T ]chr5:24372189]C . PASS SVTYPE=BND;MATEID=r_597_1 TR:VR 64:5 29:0 chr5 24372189 r_597_1 C C[chr4:65943354[ . PASS SVTYPE=BND;MATEID=r_597_0 TR:VR 64:5 29:0 chr5 148176677 r_652 T . PASS END=148188774;SVTYPE=DUP;SVLEN=12097 TR:VR 53:7 23:0 chrX 107945344 r_828 T . PASS END=107961689;SVTYPE=DUP;SVLEN=16345 TR:VR 71:12 26:0 chrX 49673299 d_1738 G . Too_small_size END=49673340;SVTYPE=DEL;SVLEN=-41 TR:VR 41:10 16:0 chr1 199067812 d_203 C . PASS END=199073110;SVTYPE=DEL;SVLEN=-5298 TR:VR 87:11 18:0 chr1 67348817 r_24 A . PASS END=67355843;SVTYPE=DUP;SVLEN=7026 TR:VR 46:5 20:0 chr11 64237583 r_152 G . PASS END=64256631;SVTYPE=DUP;SVLEN=19048 TR:VR 65:22 29:0 chr12 57906607 d_362 C . PASS END=57906750;SVTYPE=DEL;SVLEN=-143 TR:VR 54:10 27:0 chr13 25361968 r_239 T . PASS END=25726916;SVTYPE=DUP;SVLEN=364948;SVINSLEN=3;SVINSSEQ=AAC TR:VR 67:10 38:0 chr14 74660867 r_277_0 T T[chr8:101027084[ . PASS SVTYPE=BND;MATEID=r_277_1 TR:VR 137:7 43:0 chr8 101027084 r_277_1 G ]chr14:74660867]G . PASS SVTYPE=BND;MATEID=r_277_0 TR:VR 137:7 43:0 chr15 56063839 d_643 C . PASS END=56063916;SVTYPE=DEL;SVLEN=-77 TR:VR 23:14 21:0 chr17 27289063 r_360_0 C [chr17:27292034[T . PASS SVTYPE=BND;MATEID=r_360_1 TR:VR 71:22 15:0 chr17 27292034 r_360_1 T [chr17:27289063[T . PASS SVTYPE=BND;MATEID=r_360_0 TR:VR 71:22 15:0 chr3 180958181 r_582_0 T ]chr8:56107051]GTGTCCCAGTTTGACTTTAGACTGCTAGTAGGTTCTTCA . PASS SVTYPE=BND;MATEID=r_582_1;SVINSLEN=38;SVINSSEQ=GTGTCCCAGTTTGACTTTAGACTGCTAGTAGGTTCTTC TR:VR 111:16 34:0 chr8 56107051 r_582_1 A AGAAGAACCTACTAGCAGTCTAAAGTCAAACTGGGACAC[chr3:180958181[ . PASS SVTYPE=BND;MATEID=r_582_0;SVINSLEN=38;SVINSSEQ=GAAGAACCTACTAGCAGTCTAAAGTCAAACTGGGACAC TR:VR 111:16 34:0 chr4 65943357 r_598_0 C C[chr5:24370657[ . PASS SVTYPE=BND;MATEID=r_598_1 TR:VR 70:5 36:0 chr5 24370657 r_598_1 T ]chr4:65943357]T . PASS SVTYPE=BND;MATEID=r_598_0 TR:VR 70:5 36:0 chr5 149061295 r_653 C . Too_low_VAF END=149243083;SVTYPE=DUP;SVLEN=181788;SVINSLEN=36;SVINSSEQ=CTCAAACCCGTGAGCTCAAGCTATCTGCCTGCCTCA TR:VR 85:3 37:0 chr6 32037533 d_1386 T . PASS END=32037583;SVTYPE=DEL;SVLEN=-50 TR:VR 24:10 21:0 chr7 1196132 i_1124 G . PASS END=1196133;SVTYPE=INS;SVINSLEN=1764;SVINSSEQ=GGACCACAGGGAGGCTGTGATGAAGGACAAGGGGCGGGTGGGGGGACACAGGGAGCCTGTGATGAAGGGGGGGGTGGGGGGACACAGGAGGCTGTGATGAAGGGGGGGTGGGGGGACACAGGAGCCTGTGATGAAGAGGGGCGGGTGGGGGGGACACAGGAGCCTGTGATGAAGGGGGGTGGGGGGACACAGGAGGCTGTGATGAAGAGGGGGGTGGGGGGGGGACACAGGAGGCTGTGATGAAGCGGGGGGTGGGGGGGACACAGGAGGCTGTGATGAAGGGGGGTGGGGGGGACACAGGAGGCTGTGATGAAGGGGGTGGGGGGGGACACAGGAGGCTGTGATGAAGGGGGGGTGGGGGGACACAGGAGCCTGTGATGAAGGGGGGGGTGGGGGGGACACAGGAGCCTGTGATGAAGAGGGGGTGGGGGACACAGGAGGCTGTGATGAAGGGGGGGTGGGGGGGACACAGGAGGCTGTGATGAAGGGGTGGGTGGGGGGGGACACAGGAGGCTGTGATGAAGGGGGGGTGGGGGGACACAGGAGGCTGTGATGAAGACACAGGGGGGTGGGGGGGACACAGGAGGCTGTGATGAAGAGGCGGGTGGGGGACACAGGAGGCTGTGATGAAGGGGCGGGTGGGGGGACACAGGAGGCTGTGATGAAGGGGGGGTGGGGGACACAGGAGCCGCATGAAGGTGGGGGGACACAGAGGCTGTGGAGCATGGCGGGTGGGGAACACAGGAGGCTGTGATGAAGGGGGGGGGGGGTGGGGGACACAGGAGGCTGTGATGAAGGGGGTGGGGGGGGACACAGGAGGCTGTGATGAAGGGGGGTGGGGGACACAGGAGCCTGTGATGAAGGGGGGGTGGGGGACACAGGAGCCTGTGATGAAGGGGGTGGGGGACACAGGATATCGCGTGACGCCACAAGGGGGATTATGAGGTCAGGATGAGCTGGGGCGGGGGATCATGATAACAGGATGAATACGGCGGGGAACTGGCGGATAACGACGAAGGGATGGCGGTGTGGGGATCACAGGATACCGTGATTACCGGCGAAGTGGGGCATCACTGCGATACCGTGATGAAGCTGGCTGGGGGGATCACTATATACCGTGACGAATGGGGCGGGGGATTATGATGTCGTGACGAAATATGGGCGGCGGGGGATCACGATACCGTGACGGTACGGCGGGGATCACCATGAGTCCGCAGACGAAGCCGGGGTGGGGGGATCAACAGATGTACCGTGACGAAATCGCGGCGGGGGATCACCATATGAGTCCGTGACGAATGGGGTGTAAAACCAATATGATACCGGACGCCGAAGGGGGCGGGGATCGCGATACCGCATCAGCTGTACGGTAAAATACAGGATACCGATTTAGGGGCTGGGTGGGGATCGGGCTATGATGTCGCGGATTTAGCCACGGCGGGGATCACTATGATGTCGCATGAAATATACGGCGGGGATCATTGCGATAACTGCGATTTAGCCGGCGGCGGGGACTACCATTATGATGTCGTGACGAATACCGGGGTGGGGATCACACGCGATACCGTGACGAGCCGGGGGTGGGGGACAATATGATATCGCGGACGAAGGCGGCGGTGAACACAGATATCGATGAAGATAAGGCGGGGGATCACAGGATACCGTGACTTAGTCGTGGGGCGGGGGCATCATGATGTACCGGTGACGAAGATGCGCAGGGGGCGGGGGATCACCGCGCTACCGTGACTTAGAGGGGGGTGGGGGGGA TR:VR 38:6 18:0 chr8 12569847 i_1162 A . PASS END=12569898;SVTYPE=INS;SVINSLEN=198;SVINSSEQ=CGTGAGCCACCGCGCCTGGCTAGTTAGTTATTTTCTAGATACAATGAGGGGTACAGGCATTGAGTAAATATACCCATTCCAAATGGGAGAAATTGGCCAAAACATAGGGGCTACAGGCCCCATGCAAGTCTAAAATCCAATGTGGCAGTCAATCACCAGAGGTAGAACCTGGGTATGTATGTATGTGTGTGTGTGTGT TR:VR 49:8 34:0 chrX 50007026 d_1739 A . PASS END=50007215;SVTYPE=DEL;SVLEN=-189;SVINSLEN=1;SVINSSEQ=T TR:VR 23:5 19:0 chrY 11326593 d_1801 A . Too_low_VAF END=11326953;SVTYPE=DEL;SVLEN=-360;SVINSLEN=23;SVINSSEQ=CAACCCCACCATAAGCAGAGCCT TR:VR 597:3 373:0 chr1 199557773 r_70 C . PASS END=199565097;SVTYPE=DUP;SVLEN=7324 TR:VR 93:9 16:0 chr1 246446425 i_75 T . Too_low_VAF END=246446425;SVTYPE=INS;SVINSLEN=52;SVINSSEQ=CAAAAATGAAACCACTATATTATCCAATAAATTCTGTGACCGAGAGAGATCC TR:VR 61:3 23:0 chr1 67601994 r_25_0 A [chr4:76629474[A . PASS SVTYPE=BND;MATEID=r_25_1 TR:VR 58:4 32:0 chr4 76629474 r_25_1 A [chr1:67601994[A . PASS SVTYPE=BND;MATEID=r_25_0 TR:VR 58:4 32:0 chr14 77571503 r_278_0 T [chr2:70050149[G . PASS SVTYPE=BND;MATEID=r_278_1 TR:VR 60:8 39:0 chr2 70050149 r_278_1 G [chr14:77571503[G . PASS SVTYPE=BND;MATEID=r_278_0 TR:VR 60:8 39:0 chr15 56594117 r_306 C . PASS END=56607544;SVTYPE=DUP;SVLEN=13427 TR:VR 47:10 26:0 chr17 27290088 r_361_0 A A]chr17:27292460] . PASS SVTYPE=BND;MATEID=r_361_1 TR:VR 72:7 14:0 chr17 27292460 r_361_1 G G]chr17:27290088] . PASS SVTYPE=BND;MATEID=r_361_0 TR:VR 72:7 14:0 chr17 63017764 d_788 C . PASS END=63017874;SVTYPE=DEL;SVLEN=-110 TR:VR 63:4 16:0 chr3 181207587 d_1226 A . PASS END=181207832;SVTYPE=DEL;SVLEN=-245 TR:VR 26:8 17:0 chr3 90067221 d_1208 T . Too_small_size END=90067257;SVTYPE=DEL;SVLEN=-36 TR:VR 41:17 20:0 chr4 66464159 r_599 A . PASS END=66476395;SVTYPE=DUP;SVLEN=12236 TR:VR 56:8 24:0 chr5 149766452 r_654_0 A A]chrX:51607039] . PASS SVTYPE=BND;MATEID=r_654_1 TR:VR 74:7 36:0 chrX 51607039 r_654_1 C C]chr5:149766452] . PASS SVTYPE=BND;MATEID=r_654_0 TR:VR 74:7 36:0 chr6 32489336 d_1387 T . PASS END=32489448;SVTYPE=DEL;SVLEN=-112 TR:VR 130:8 62:0 chr8 127553122 r_779 A . Too_low_VAF END=127563361;SVTYPE=DUP;SVLEN=10239 TR:VR 132:4 26:0 chr8 143204969 d_1566 C . Too_low_VAF END=143205107;SVTYPE=DEL;SVLEN=-138;SVINSLEN=24;SVINSSEQ=CTCTCTGTGATTTGACAGGAAGTG TR:VR 90:4 18:0 chr9 33188619 d_1583 T . PASS END=33188668;SVTYPE=DEL;SVLEN=-49 TR:VR 29:19 18:0 chrUn_KI270442v1 70087 i_1348 C . PASS END=70087;SVTYPE=INS;SVINSLEN=67;SVINSSEQ=ACTGGAATGGAAAAGTTATGGAATCGAAATGAATACAACAAGACAGAATGGAATGGAAAGGAAACAA TR:VR 151:12 106:0 chr1 200768562 i_45 T . Too_small_size END=200768562;SVTYPE=INS;SVINSLEN=48;SVINSSEQ=ACCACTTAGGAGGCTGTTGAAATAGCTGGAGGCCTGAACTAAGGTGCA TR:VR 73:21 24:0 chr1 67613816 r_26_0 C C]chr4:76642483] . PASS SVTYPE=BND;MATEID=r_26_1 TR:VR 70:7 40:0 chr4 76642483 r_26_1 A A]chr1:67613816] . PASS SVTYPE=BND;MATEID=r_26_0 TR:VR 70:7 40:0 chr10 14925239 r_96 A . PASS END=14927038;SVTYPE=DEL;SVLEN=-1799 TR:VR 50:9 27:0 chr11 116193080 r_178_0 C ]chr4:79165761]T . PASS SVTYPE=BND;MATEID=r_178_1 TR:VR 50:7 35:0 chr4 79165761 r_178_1 T T[chr11:116193080[ . PASS SVTYPE=BND;MATEID=r_178_0 TR:VR 50:7 35:0 chr11 65207776 r_154_0 G [chr17:42804156[A . PASS SVTYPE=BND;MATEID=r_154_1 TR:VR 68:7 38:0 chr17 42804156 r_154_1 A [chr11:65207776[A . PASS SVTYPE=BND;MATEID=r_154_0 TR:VR 68:7 38:0 chr13 27240245 r_240 A . PASS END=27307678;SVTYPE=DUP;SVLEN=67433 TR:VR 51:8 32:0 chr14 77571769 r_279_0 C C]chr2:70052621] . PASS SVTYPE=BND;MATEID=r_279_1 TR:VR 62:8 38:0 chr2 70052621 r_279_1 T T]chr14:77571769] . PASS SVTYPE=BND;MATEID=r_279_0 TR:VR 62:8 38:0 chr17 27317904 d_770 A . PASS END=27317919;SVTYPE=INS;SVINSLEN=113;SVINSSEQ=GCTGGTACTACAAGTGCGTGCCACCATGCCCAGCTAAATTTTTTGTATTTTTTTTGTAGAAGCAAGGTTTCACCATGTTGCTAAGGCTAATCTAGAACTCCTGGGCTCAAGCA TR:VR 72:16 23:0 chr17 63343182 r_391_0 A A]chr17:66486926] . PASS SVTYPE=BND;MATEID=r_391_1 TR:VR 144:23 38:0 chr17 66486926 r_391_1 C C]chr17:63343182] . PASS SVTYPE=BND;MATEID=r_391_0 TR:VR 144:23 38:0 chr18 13825281 i_517 T . PASS END=13825281;SVTYPE=INS;SVINSLEN=2519;SVINSSEQ=GATTCCTGTGACACCCATGCTGGAGTGCAGTGGCATGATCTTGGCAACCTCCTCCTCCTGGGTTCAAGTAATTCTCCTGCCTCAGTCTCCCGAGTAGCTGGGACTAAAGGTGCCTGCCACCATGCCCAGATAATTTTTGTATTTTAGGTAGAGACGGGGTTTCACCATATTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCGCCCACCCTGGCCTCCCAAAGTGTTGGGATTACAGGCGTGAGCCATTGTGCCCGGCCTGTACTATAGTTTTGCAAGATGTTACCACTGGGGGAAACTGGATGAATGGTATAGGGCAGCAGTTCCCAACCTTTTTGGCACCAGGGACCAGTATTGTGGAAGACAATTTTTCCATGGACCAGGAGATTGTGGGGATGGTTTCAGGATGAAACTTCTGCCTCAGATCAGGCATTAGATTATCATAAGGAGCACATAACCTAGATCCTTCACTTGCACAACTCACAATAGGGTTTACACACCTATGAGAATCTAATGCCACCGCTGATCTGACAGGAGGCGGAGTTCAGGCAGTAATGCTCACTCACCGGCTGCTCACCTTCTCTTGGGCAGCCAGGTTCCTAACAGGCTGTAGATCAATACCAGTCCACGACCCACGGGTTGGGAACCCCTGGTACAGGGAACTCCTTTGTTTTATTTCTTGTAACTGCGTGTTTATTTATAATTATCTCAAAATTATGAAGTTAAAAACAAATAATACAGGCCAGTTTTTTCAGTTTAGCCATTTTAATAGATGTGTAGTGACATCTCATTGTGGTTTTTAATTTGTGTAACTTGCACTTATTGGTTTTCTAAATATCTTCTTTGGTAAAGTGTCTTCAGATTTTATATCCACTTTTTTAATGATCATTTTCTTATTATTGAGTTTTGAGAGTTAAAAAATATATAATTTGAAAAGATCTTATCAAATATGTGTTTTGCAAATATTAGCTCAGCCTATGGCTTTTCATTTTCTAACTCAGTGTTTTTTAAAAAGAAGAAATTTTAATTTGATGCAGTTCAATTTATTGATTACTTATCTTTTGGATGACCCTTTTGGTATTATATCTAAGAACTCATTGTTTAACCCTAGGTTACAGAGATTTTATTCATACAAAGTGTTGGTAAAGATAGGAAAGAAATAAAACTGATACAATGCTGGTGGAAAGGTAAAATGTGACAACCTCATGGAAAATATTTTTGGAGTTTATAAAAATGTTAGCATATTCCTATTATATGACTTAATCATACCACTCCTCAGTATTTACCCAAGAGAAAGAAAGCTTGCAGGCACGCAAAGACTTGCATGTGTATACAATTTGTCAGAATCAAAATGGAGCCACTAATGTCAGGAAAATCCTGACATAGAGCCACGGAAGGCTATGAAGAGGGAGTTCTCACGTTTGTATGCCTGATAAAGAACAAGATTACAAAAACCACAACCTTGTACAAAGGCCATTGCAACCTTACAAAAAGAAAAAAATACTTCTGCAAAGACATTTGCCCAGCAACTGCCTGTCTAACCTGGGACTAGTGTCACCCTTCTTATTAATCCTTGTAGTTAAGGGTAATTATTTCAAAAACAATTATGTAATCCTCCTAGTTTTTTTCTTTAAAAAACTCTGTCTTTCTTTACCTCCCTGAATACACACATAATTTACTATAACATGTGTATTCCCATTGCAATGCTCTAGTCACAAATAAACACCATTTACTTTTTCAGAGAACTTCTCTCTGTTATTTAAATTGAGACGCATATGCTCACAGCAGCTTTATTTTTAATAGCCCGAAACTGGAAACAACTCAAATTTCCACCAAGAGGAGAATGAGTGTACAAATTGGGGTATATCCATAGAGTGATATACTACTAAACAATAAACAAGGATGAAATATTGATGCACACAACATGAATAAATCTCAAAATAATTATACTGAGTAAAAGAAGCCAGAAAACCTACACGTACATACATACAAGAGTAAATATTGCATGATTCCATGTATACAAAAATTCTAAAAGTGCAAACTAATCTATATTGACAGATGCAGATCATTGGTTGCATGGGAAGGGATATAGGGAAGGGTGAGAGAAAGATCATGAGGGAACAGGAAGGTGGTGGGTTCACTCATTATCTTGACTGTGGTGATAGTTTCACAGGTATATACGTATGTCAAACATATCAAATTGTACATGTTACATATGTGAAGTTTGTTTAATAAAGCTGTTAAAAAAATAGAGCCCTCTTGCTTCTCCCTGGGCTGTCAAAGCTGCTGCTAGGGGAAATGACAGAGCCCCTGCCTACTTCCCCAGAACCTTCTCTCTTACCAGCAAAAGTCATGAGCCACTGCAAGAGGGACAGAAAATACTCCCGCTTCCAAAGCCCAGAAAAAGATTCACTGCTTTGTAAGAGAGGGAAGATGCCAAGGTCAACTGCCCATGAGGGAGACCAAGAAACCTTTTTGGACACATTATCCAGCGCTGATGGGCAAGCTGGAGG TR:VR 34:9 19:0 chr2 158633865 r_486 C . PASS END=158644613;SVTYPE=DUP;SVLEN=10748 TR:VR 55:10 29:0 chr5 151706527 r_655 G . PASS END=151728342;SVTYPE=DEL;SVLEN=-21815 TR:VR 46:5 33:0 chr5 47128874 i_1022 C . PASS END=47128874;SVTYPE=INS;SVINSLEN=1546;SVINSSEQ=AGTGTTGAGAAGTGTCTGTTCATGTCCTTCACCCACTTTTTGATGGGGTTCTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGTGAAAATTTTCTCCCATTTTCTAGGTTGCTTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTACTTTTATTAGATCCCATTTGTCAGTTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACATGAAGTCTTTGCCCGTGCCTACGTCCTGAATGGTAATGCCTGGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAGTCTTTAATCCATCTTGAATTGATTTTTGTATAAGTGTAATTTATGCAGCCAAAAAACACATGAAAAAAAGCTCATCATCACTGGTCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAAAGTATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTGGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAAGATTATGAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCATTATTCACAATAGCAAAGTCTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAATCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTGTCACTCATAGGTGGGAATTGAACAATGAGGTCACATGGACACAGGAAGGGGAATATCACACTCTGTGGACTGTTGTGGGGTGGGGAGAGGGGGGAGGGATAGCATCAGGTTATAAACCTAATGCTAGATGACGAGTTAGTGGGTGCAGCACACCAGCATGGCTCATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATTTAAAAAAAAAAGAAAAGAGAAAAAAAAAGAGCAGTGTTGAAGCACTTTCAGTAGAATCTGCAAGTGGTCATTTGGAGCACTTTCTTGCCTATGGTGGAAAAAGAAATATCTTCACATAAAAACTAGACAGAAGAATTCCCAGAGAAATTCCTTTGTGATGTGTGTGTTCAATTCACAGAGTTGAACCTTTCTTTTATTAGAGCAGTTTTGAAACACTGCTTTTGTAAAATCTGCTTGTGGATATTTGGAGCTCTTTGAGGAAATCGTTGTAAACGGGATATTTTCCCATACAAACTAGACAGAGGCATTCTCAGAAAGTTCTTGTTTGATGTGTGCATTCCCCTCACTGAGTTGAAACTTTCTTTTGATAGAGTA TR:VR 116:6 51:0 chr7 123022704 d_1468 C . Too_small_size END=123022745;SVTYPE=DEL;SVLEN=-41 TR:VR 16:3 17:0 chr7 62878644 i_1142 C . PASS END=62878644;SVTYPE=INS;SVINSLEN=172;SVINSSEQ=TGGGAAAATTCTCCATGATGTGTGAATTCATCTCACAGAGTTAATCATTTCTGTATATTCAGTGGTTTGCAAACACTGTTTTGTCCATTCTGTGAATGGATATTTGGGAGCTCTTTATGGTCATTTGTGAAAAAGGGAATATCCCAGGTTAAAAACTAGAGGGAGGCTATTT TR:VR 29:5 19:0 chr8 128663504 r_780 C . Too_low_VAF END=128690208;SVTYPE=DUP;SVLEN=26704;SVINSLEN=7;SVINSSEQ=GTAAAGA TR:VR 201:9 29:0 chr9 35338768 d_1584 A . PASS END=35338816;SVTYPE=DEL;SVLEN=-48 TR:VR 25:5 19:0 chrX 114454149 d_1749 A . Too_small_size END=114454185;SVTYPE=DEL;SVLEN=-36;SVINSLEN=1;SVINSSEQ=A TR:VR 29:10 15:0 chrX 524594 r_820 T . PASS END=823256;SVTYPE=DUP;SVLEN=298662 TR:VR 40:3 36:0 chr1 68103063 d_20 C . PASS END=68103122;SVTYPE=DEL;SVLEN=-59 TR:VR 47:4 22:0 chr11 116560182 r_179 G . PASS END=117125634;SVTYPE=DUP;SVLEN=565452 TR:VR 53:11 50:0 chr11 65207963 r_155_0 A A]chr17:42812705] . PASS SVTYPE=BND;MATEID=r_155_1 TR:VR 63:7 36:0 chr17 42812705 r_155_1 A A]chr11:65207963] . PASS SVTYPE=BND;MATEID=r_155_0 TR:VR 63:7 36:0 chr14 81537378 r_280 T . PASS END=81728299;SVTYPE=DUP;SVLEN=190921 TR:VR 44:11 48:0 chr15 75710052 r_308 A . PASS END=75915884;SVTYPE=DUP;SVLEN=205832 TR:VR 55:7 36:0 chr17 27965324 r_362_0 G [chr8:124444387[T . Too_low_VAF SVTYPE=BND;MATEID=r_362_1 TR:VR 147:5 48:0 chr8 124444387 r_362_1 T [chr17:27965324[T . Too_low_VAF SVTYPE=BND;MATEID=r_362_0 TR:VR 147:5 48:0 chr17 63941120 d_789 G . Too_small_size END=63941156;SVTYPE=DEL;SVLEN=-36 TR:VR 25:3 16:0 chr21 15485951 r_528 C . PASS END=15491363;SVTYPE=DUP;SVLEN=5412 TR:VR 44:3 24:0 chr4 169113966 r_619 G . PASS END=183409150;SVTYPE=DUP;SVLEN=14295184 TR:VR 86:9 40:0 chr5 152060416 r_656 C . PASS END=152072980;SVTYPE=DUP;SVLEN=12564 TR:VR 65:6 29:0 chr6 151864911 r_715 G . PASS END=152076516;SVTYPE=DEL;SVLEN=-211605 TR:VR 70:10 41:0 chr8 128685117 r_781 T . Too_low_VAF END=128690244;SVTYPE=DUP;SVLEN=5127 TR:VR 140:3 18:0 chr8 8627146 r_741 C . PASS END=8638597;SVTYPE=DUP;SVLEN=11451 TR:VR 36:9 29:0 chr1 7144221 d_13 A . PASS END=7144272;SVTYPE=DEL;SVLEN=-51 TR:VR 41:16 22:0 chr11 116785986 r_180 G . PASS END=116819692;SVTYPE=DUP;SVLEN=33706 TR:VR 105:17 35:0 chr11 66628386 r_156 T . PASS END=66649419;SVTYPE=DUP;SVLEN=21033;SVINSLEN=3;SVINSSEQ=GTC TR:VR 76:16 20:0 chr12 130548918 d_375 A . PASS END=130549268;SVTYPE=DEL;SVLEN=-350 TR:VR 35:30 28:0 chr13 30178977 d_398 A . Too_small_size END=30179017;SVTYPE=DEL;SVLEN=-40 TR:VR 29:8 15:0 chr17 27977602 r_363_0 C C]chr17:27997990] . Too_low_VAF SVTYPE=BND;MATEID=r_363_1 TR:VR 64:3 30:0 chr17 27997990 r_363_1 T T]chr17:27977602] . Too_low_VAF SVTYPE=BND;MATEID=r_363_0 TR:VR 64:3 30:0 chr19 2928234 r_423 A . PASS END=2997950;SVTYPE=DUP;SVLEN=69716;SVINSLEN=5;SVINSSEQ=ATCTC TR:VR 61:4 30:0 chr21 21415339 r_529 T . PASS END=21438452;SVTYPE=DUP;SVLEN=23113 TR:VR 65:6 25:0 chr3 186086490 d_1227 T . PASS END=186086554;SVTYPE=DEL;SVLEN=-64 TR:VR 19:5 16:0 chr4 171304652 d_1297 G . Too_small_size END=171304697;SVTYPE=DEL;SVLEN=-45 TR:VR 42:11 18:0 chr6 151951672 r_716_0 G G[chr8:71301038[ . PASS SVTYPE=BND;MATEID=r_716_1 TR:VR 159:11 52:0 chr8 71301038 r_716_1 T ]chr6:151951672]T . PASS SVTYPE=BND;MATEID=r_716_0 TR:VR 159:11 52:0 chr8 86619350 d_1526 A . PASS END=86619470;SVTYPE=DEL;SVLEN=-120 TR:VR 104:7 24:0 chr9 36629514 r_798 A . PASS END=36642716;SVTYPE=DUP;SVLEN=13202 TR:VR 40:6 34:0 chr10 15544694 r_97 C . PASS END=15549321;SVTYPE=DUP;SVLEN=4627 TR:VR 52:5 22:0 chr11 116812508 r_181_0 T TTAAATATATTAAATATTTAAATATATTAAATATTTAAATCTTTTTGTCTTGCTGAGTTGTATGAGATATATATATATTTTTATATTTATATGTATTTATATCTATATTTATATATAAATATATATTATATATTTATATAATATATATTTATGTATTAT]chr11:116865196] . PASS SVTYPE=BND;MATEID=r_181_1;SVINSLEN=158;SVINSSEQ=TAAATATATTAAATATTTAAATATATTAAATATTTAAATCTTTTTGTCTTGCTGAGTTGTATGAGATATATATATATTTTTATATTTATATGTATTTATATCTATATTTATATATAAATATATATTATATATTTATATAATATATATTTATGTATTAT TR:VR 105:6 38:0 chr11 116865196 r_181_1 T TATAATACATAAATATATATTATATAAATATATAATATATATTTATATATAAATATAGATATAAATACATATAAATATAAAAATATATATATATCTCATACAACTCAGCAAGACAAAAAGATTTAAATATTTAATATATTTAAATATTTAATATATTTA]chr11:116812508] . PASS SVTYPE=BND;MATEID=r_181_0;SVINSLEN=158;SVINSSEQ=ATAATACATAAATATATATTATATAAATATATAATATATATTTATATATAAATATAGATATAAATACATATAAATATAAAAATATATATATATCTCATACAACTCAGCAAGACAAAAAGATTTAAATATTTAATATATTTAAATATTTAATATATTTA TR:VR 105:6 38:0 chr12 62290357 r_207 T . PASS END=62476844;SVTYPE=DUP;SVLEN=186487 TR:VR 106:7 33:0 chr14 18499607 i_276 A . PASS END=18499607;SVTYPE=INS;SVINSLEN=382;SVINSSEQ=TGGGATTCCAGAACACTGCTACGAATTCTGAATCTTTGTCCTTCACACAGGATTATGATACACTGCTGCTGGGTTCTGAGGGTTTTTACCTCACATAGGGTTCCAGAACACTGCTACGAATTCTGAATCTTTGTCCTTCACACAGGATTATGATACACTGCTGCTGGGTTCTGAGGGTTTTTACCTCATATAGGGTTCCAGAACACTGCTGCTGGGTTCTGAGTGTTTGTCCCCGACATAGGATTCCAGAACAGAGATGCTGGGTTCTGAGTGTTTGTCACTCACATGGAATTCCAAAATACTGATGTTGGGTTCGGAGTGTTTCTCCCTCACATACGAATCCAGAACACTGCTATGAGTTTCTGAATGTTTGTCCCAAACA TR:VR 29:10 8:0 chr15 86282745 r_309_0 G G[chr19:45680738[ . PASS SVTYPE=BND;MATEID=r_309_1 TR:VR 69:10 41:0 chr19 45680738 r_309_1 G ]chr15:86282745]G . PASS SVTYPE=BND;MATEID=r_309_0 TR:VR 69:10 41:0 chr17 9675978 d_759 G . PASS END=9676093;SVTYPE=DEL;SVLEN=-115 TR:VR 51:9 26:0 chr21 23820777 d_1138 T . PASS END=23820850;SVTYPE=DEL;SVLEN=-73 TR:VR 28:7 18:0 chr4 172856524 r_620 G . PASS END=172875397;SVTYPE=DUP;SVLEN=18873 TR:VR 91:13 23:0 chr5 152374074 i_1043 A . PASS END=152374100;SVTYPE=INS;SVINSLEN=162;SVINSSEQ=TGGAGACAGGACACATTAGCAGGGACAAGCTGTGTAAGGGATAAAAGTTGCTTCCCTCCTTTGTTCAGGTGTGCTCTTGCCATTGTTCCATCTGCGAGGAGCACCCTTTCTGCAAAAAGTAAAATTGGCTTGCTGAGAAAATTGTCTAAATGCTATTTTTTG TR:VR 41:11 20:0 chr6 152970984 d_1415 A . PASS END=152971309;SVTYPE=DEL;SVLEN=-325;SVINSLEN=9;SVINSSEQ=GCACTCCAG TR:VR 35:24 19:0 chr9 36964957 r_799_0 A [chrX:97482757[G . PASS SVTYPE=BND;MATEID=r_799_1 TR:VR 49:6 35:0 chrX 97482757 r_799_1 G [chr9:36964957[G . PASS SVTYPE=BND;MATEID=r_799_0 TR:VR 49:6 35:0 chrUn_KI270442v1 85826 d_1677 G . Too_low_VAF END=85906;SVTYPE=DEL;SVLEN=-80 TR:VR 240:3 134:1 chr11 116814294 r_182_0 C [chr4:79165603[G . Too_low_VAF SVTYPE=BND;MATEID=r_182_1 TR:VR 87:3 44:0 chr4 79165603 r_182_1 G [chr11:116814294[G . Too_low_VAF SVTYPE=BND;MATEID=r_182_0 TR:VR 87:3 44:0 chr12 62612492 d_364 C . PASS END=62612546;SVTYPE=DEL;SVLEN=-54 TR:VR 44:6 27:0 chr15 86282804 r_310_0 T ]chr19:45736639]G . PASS SVTYPE=BND;MATEID=r_310_1 TR:VR 66:11 40:0 chr19 45736639 r_310_1 G G[chr15:86282804[ . PASS SVTYPE=BND;MATEID=r_310_0 TR:VR 66:11 40:0 chr16 86487124 d_732 T . Too_small_size END=86487160;SVTYPE=DEL;SVLEN=-36 TR:VR 23:20 20:0 chr17 66181456 r_392_0 C [chr17:66487980[T . PASS SVTYPE=BND;MATEID=r_392_1 TR:VR 135:23 30:0 chr17 66487980 r_392_1 T [chr17:66181456[T . PASS SVTYPE=BND;MATEID=r_392_0 TR:VR 135:23 30:0 chr2 163660345 i_706 C . PASS END=163660345;SVTYPE=INS;SVINSLEN=66;SVINSSEQ=CTTCTCATTGATGGTATCTGATCTAATAGGTGGAGAAATGTGCTGAATTGTCACAGCATACATTTC TR:VR 30:11 17:0 chr21 26064978 r_530 A . PASS END=26086116;SVTYPE=DUP;SVLEN=21138 TR:VR 59:6 31:0 chr3 187403948 r_584 A . PASS END=187407016;SVTYPE=DEL;SVLEN=-3068;SVINSLEN=10;SVINSSEQ=AACCAGAGCA TR:VR 36:14 27:0 chr4 21977803 i_914 A . PASS END=21977812;SVTYPE=INS;SVINSLEN=50;SVINSSEQ=ACATAGCTGTTTCCCCAGGCTTTAGAGGCATGTAGCTGTTTTCCCCAGGC TR:VR 34:8 12:0 chr7 128650049 r_735 G . PASS END=128658350;SVTYPE=DUP;SVLEN=8301 TR:VR 43:7 31:0 chr7 65942353 d_1461 A . PASS END=65942432;SVTYPE=DEL;SVLEN=-79 TR:VR 22:5 19:0 chr8 86830456 d_1527 G . PASS END=86830917;SVTYPE=DEL;SVLEN=-461 TR:VR 84:5 12:0 chrX 120754946 d_1750 G . PASS END=120756214;SVTYPE=DEL;SVLEN=-1268 TR:VR 39:9 19:0 chr1 247116965 d_227 G . PASS END=247117137;SVTYPE=INS;SVINSLEN=258;SVINSSEQ=AGGGCGTGTCCCTGTGGGGGTGACAGCAAGGTCATCACGGGGAGGGGGCGTGTCCCTGTGGGGTGACAGCAAGGTCATCACGGGGAGGGGGCGTGTCCCTGTGGGCGGGTGACAGCAAGGTCATCACGGGGAGGGGCGTGTCCCTGTGGGGGGGTGACAGCAAGGTCATCACGGGGAGGGGCGTGTCCCTGTGGGGGGGTGACAGCAAGGTCATCACGGGGAGGGGGCGTGTCCCTGTGGGCGGGTGACAGCAAGGTC TR:VR 60:4 19:0 chr11 120346902 r_183 T . PASS END=120369787;SVTYPE=DUP;SVLEN=22885 TR:VR 37:6 25:0 chr11 72839048 r_158_0 T [chr7:46309251[C . Too_low_VAF SVTYPE=BND;MATEID=r_158_1 TR:VR 83:4 36:0 chr7 46309251 r_158_1 C [chr11:72839048[C . Too_low_VAF SVTYPE=BND;MATEID=r_158_0 TR:VR 83:4 36:0 chr12 66567933 d_365 T . Too_small_size END=66567976;SVTYPE=DEL;SVLEN=-43 TR:VR 57:16 16:0 chr15 88987383 r_311 A . PASS END=88991649;SVTYPE=DEL;SVLEN=-4266 TR:VR 19:14 20:0 chr17 66486435 r_393 T . PASS END=68470275;SVTYPE=DUP;SVLEN=1983840 TR:VR 169:23 36:0 chr2 24626717 r_441 T . PASS END=24641717;SVTYPE=DUP;SVLEN=15000;SVINSLEN=1;SVINSSEQ=G TR:VR 91:19 30:0 chr21 28368757 d_1139 G . PASS END=28368814;SVTYPE=DEL;SVLEN=-57 TR:VR 35:8 13:0 chr4 30985213 d_1241 T . Too_small_size END=30985254;SVTYPE=DEL;SVLEN=-41 TR:VR 48:21 9:0 chr7 129772439 r_736 A . PASS END=129786536;SVTYPE=DUP;SVLEN=14097 TR:VR 56:3 30:0 chr8 88866487 d_1528 T . Too_low_VAF END=88866603;SVTYPE=DEL;SVLEN=-116 TR:VR 112:4 18:0 chrX 124822619 d_1751 T . PASS END=124822668;SVTYPE=DEL;SVLEN=-49 TR:VR 32:6 22:0 chr1 204613828 r_71 T . Too_low_VAF END=204802394;SVTYPE=DUP;SVLEN=188566 TR:VR 134:3 44:0 chr1 78283954 d_24 T . PASS END=78284015;SVTYPE=DEL;SVLEN=-61 TR:VR 32:10 21:0 chr10 18945481 r_98_0 T [chr5:74877346[G . PASS SVTYPE=BND;MATEID=r_98_1 TR:VR 74:6 47:0 chr5 74877346 r_98_1 G [chr10:18945481[G . PASS SVTYPE=BND;MATEID=r_98_0 TR:VR 74:6 47:0 chr11 72848501 r_159_0 T T]chr7:46309470] . PASS SVTYPE=BND;MATEID=r_159_1 TR:VR 83:5 30:0 chr7 46309470 r_159_1 T T]chr11:72848501] . PASS SVTYPE=BND;MATEID=r_159_0 TR:VR 83:5 30:0 chr12 68762322 r_208_0 A [chr3:127041486[C . PASS SVTYPE=BND;MATEID=r_208_1 TR:VR 79:10 47:0 chr3 127041486 r_208_1 C [chr12:68762322[C . PASS SVTYPE=BND;MATEID=r_208_0 TR:VR 79:10 47:0 chr17_GL000205v2_random 12726 i_482 G . PASS END=12727;SVTYPE=INS;SVINSLEN=98;SVINSSEQ=GACAAACATTTAGAAACCAGCAGCAGTGTTGTGGAATCCTATGAGAGGCACAAACATTCAGACCTTAGTAGAGTTATTCTGGAATCCCATGTGAGGGA TR:VR 154:8 104:1 chr2 166366404 r_488 T . PASS END=166389888;SVTYPE=DUP;SVLEN=23484;SVINSLEN=13;SVINSSEQ=TCTGGTTCTTTAC TR:VR 62:22 25:0 chr2 26333431 r_442_0 A ]chr4:89723845]GCAA . PASS SVTYPE=BND;MATEID=r_442_1;SVINSLEN=3;SVINSSEQ=GCA TR:VR 83:5 35:0 chr4 89723845 r_442_1 A ATGC[chr2:26333431[ . PASS SVTYPE=BND;MATEID=r_442_0;SVINSLEN=3;SVINSSEQ=TGC TR:VR 83:5 35:0 chr21 28701914 d_1140 T . Too_small_size END=28701959;SVTYPE=DEL;SVLEN=-45 TR:VR 31:7 12:0 chr3 189628427 d_1229 G . PASS END=189630100;SVTYPE=DEL;SVLEN=-1673 TR:VR 24:10 25:0 chr3 91520473 d_1212 T . PASS END=91520580;SVTYPE=INS;SVINSLEN=107;SVINSSEQ=TAAAAGAAAGGTTATACTCTGCGAGTTGAATGCACACATCACAAATTAGTTTCTGAGAATGATTCTGTCTGGTTTTTCTATGAAGATATTTCCTTTTCTACCATAGG TR:VR 46:13 11:0 chr5 156776165 r_657 G . PASS END=156795859;SVTYPE=DUP;SVLEN=19694 TR:VR 70:11 28:0 chr5 50250385 d_1345 C . PASS END=50250454;SVTYPE=INS;SVINSLEN=69;SVINSSEQ=TGTTACCAAAATGCTCCATCAAAAGAAAGGTTCAACTCTGGGAGATGAATGCACACATCACAAAGGAGA TR:VR 34:3 21:0 chr8 129987563 r_783 T . PASS END=130052685;SVTYPE=DUP;SVLEN=65122 TR:VR 199:11 45:0 chr8 90867922 i_1223 A . PASS END=90867948;SVTYPE=INS;SVINSLEN=83;SVINSSEQ=ACCTAAAAATATTACTCTTTATCCCCCACCTTTCTTTGTAAAATGTTGCCATTAAGAACTTACCTGGGCCGGGCGCGGTGGCG TR:VR 101:7 24:0 chr1 20536608 r_12 C . PASS END=20568576;SVTYPE=DUP;SVLEN=31968 TR:VR 69:12 29:0 chr1 81391586 r_27_0 A AAAAAAAAAAAAAAAAAACTGCTCTATGAAGGGAAGGTAGAACTCTGTTAGTTGAATGCACACATCGCAAAGAAGTTTCTGAGAATTCTTCTCTCGAGTTTTATATGAAGAAATCCCGTTTCCAATGAAGGCCTCAAAAAAGTCC[chr3:90509005[ . Too_low_VAF SVTYPE=BND;MATEID=r_27_1;SVINSLEN=144;SVINSSEQ=AAAAAAAAAAAAAAAAACTGCTCTATGAAGGGAAGGTAGAACTCTGTTAGTTGAATGCACACATCGCAAAGAAGTTTCTGAGAATTCTTCTCTCGAGTTTTATATGAAGAAATCCCGTTTCCAATGAAGGCCTCAAAAAAGTCC TR:VR 148:4 62:1 chr3 90509005 r_27_1 A ]chr1:81391586]GGACTTTTTTGAGGCCTTCATTGGAAACGGGATTTCTTCATATAAAACTCGAGAGAAGAATTCTCAGAAACTTCTTTGCGATGTGTGCATTCAACTAACAGAGTTCTACCTTCCCTTCATAGAGCAGTTTTTTTTTTTTTTTTTA . Too_low_VAF SVTYPE=BND;MATEID=r_27_0;SVINSLEN=144;SVINSSEQ=GGACTTTTTTGAGGCCTTCATTGGAAACGGGATTTCTTCATATAAAACTCGAGAGAAGAATTCTCAGAAACTTCTTTGCGATGTGTGCATTCAACTAACAGAGTTCTACCTTCCCTTCATAGAGCAGTTTTTTTTTTTTTTTTT TR:VR 148:4 62:1 chr10 19056675 r_99_0 T [chr7:31934613[A . PASS SVTYPE=BND;MATEID=r_99_1 TR:VR 89:7 41:0 chr7 31934613 r_99_1 A [chr10:19056675[A . PASS SVTYPE=BND;MATEID=r_99_0 TR:VR 89:7 41:0 chr11 73870794 r_160 A . PASS END=73891325;SVTYPE=DUP;SVLEN=20531 TR:VR 69:16 33:0 chr14 94417322 r_282_0 G [chr8:36958222[A . PASS SVTYPE=BND;MATEID=r_282_1 TR:VR 105:56 40:0 chr8 36958222 r_282_1 A [chr14:94417322[A . PASS SVTYPE=BND;MATEID=r_282_0 TR:VR 105:56 40:0 chr2 26491138 d_914 G . PASS END=26491186;SVTYPE=DEL;SVLEN=-48 TR:VR 43:7 12:0 chr2 95230701 d_1016 T . Too_small_size END=95230736;SVTYPE=DEL;SVLEN=-35 TR:VR 43:8 25:0 chr3 193397643 r_585 T . PASS END=193404029;SVTYPE=DUP;SVLEN=6386 TR:VR 37:5 19:0 chr4 32715672 r_590_0 T ]chr7:126041689]G . Too_low_VAF SVTYPE=BND;MATEID=r_590_1 TR:VR 95:4 38:0 chr7 126041689 r_590_1 G G[chr4:32715672[ . Too_low_VAF SVTYPE=BND;MATEID=r_590_0 TR:VR 95:4 38:0 chr5 163015672 r_658_0 T [chr5:171364807[C . PASS SVTYPE=BND;MATEID=r_658_1 TR:VR 127:12 49:0 chr5 171364807 r_658_1 C [chr5:163015672[C . PASS SVTYPE=BND;MATEID=r_658_0 TR:VR 127:12 49:0 chr5 52464316 d_1346 A . Too_small_size END=52464354;SVTYPE=DEL;SVLEN=-38 TR:VR 37:6 20:0 chr6 32526032 r_687_0 T T]chr8:46312317] . Too_low_VAF SVTYPE=BND;MATEID=r_687_1 TR:VR 178:5 75:1 chr8 46312317 r_687_1 A A]chr6:32526032] . Too_low_VAF SVTYPE=BND;MATEID=r_687_0 TR:VR 178:5 75:1 chr7 13436236 d_1444 A . PASS END=13436668;SVTYPE=DEL;SVLEN=-432 TR:VR 39:5 22:0 chr7 66572198 r_727 T . PASS END=66591695;SVTYPE=DUP;SVLEN=19497 TR:VR 72:5 30:0 chr8 130527645 d_1547 T . Too_small_size END=130527691;SVTYPE=DEL;SVLEN=-46 TR:VR 88:37 14:0 chr8 92036635 r_761 T . PASS END=92040835;SVTYPE=DUP;SVLEN=4200 TR:VR 125:25 18:0 chrX 66325613 d_1740 A . PASS END=66325859;SVTYPE=DEL;SVLEN=-246 TR:VR 36:6 23:0 chr1 205542479 d_205 C . PASS END=205542654;SVTYPE=DEL;SVLEN=-175 TR:VR 64:20 20:0 chr11 74502301 d_335 T . PASS END=74502585;SVTYPE=DEL;SVLEN=-284;SVINSLEN=10;SVINSSEQ=GTCCATAGTA TR:VR 39:11 28:0 chr14 20381824 r_259 A . PASS END=20387276;SVTYPE=DUP;SVLEN=5452 TR:VR 47:9 27:0 chr14 94498829 r_283 A . Too_low_VAF END=94512450;SVTYPE=DUP;SVLEN=13621 TR:VR 117:5 18:0 chr18 20814971 d_839 T . PASS END=20815248;SVTYPE=DEL;SVLEN=-277;SVINSLEN=105;SVINSSEQ=ACCTGAAGATATTCCGGTTTCCAACGAAATCCTTAAAGCTCTCCAAATATCCACTTGCAGATTCTCCAAAAAGCGTCTTTCAAATCTGCTCTGTAATTAGAAAGG TR:VR 12:3 4:0 chr2 167139246 d_1030 T . Too_small_size END=167139281;SVTYPE=DEL;SVLEN=-35 TR:VR 38:4 19:0 chr2 26667081 r_443 C . PASS END=26671144;SVTYPE=DUP;SVLEN=4063 TR:VR 53:9 19:0 chr2 87654509 r_463_0 T [chr8:95950627[G . PASS SVTYPE=BND;MATEID=r_463_1 TR:VR 130:18 45:0 chr8 95950627 r_463_1 G [chr2:87654509[G . PASS SVTYPE=BND;MATEID=r_463_0 TR:VR 130:18 45:0 chr2 96452484 d_1017 T . PASS END=96452811;SVTYPE=DEL;SVLEN=-327 TR:VR 37:12 15:0 chr3 9346915 d_1188 C . PASS END=9347734;SVTYPE=DEL;SVLEN=-819;SVINSLEN=1;SVINSSEQ=A TR:VR 32:22 23:0 chr4 181418192 d_1299 C . PASS END=181419771;SVTYPE=DEL;SVLEN=-1579 TR:VR 54:16 19:0 chr4 33579084 d_1242 T . PASS END=33579136;SVTYPE=DEL;SVLEN=-52 TR:VR 42:19 22:0 chr5 163626489 r_659 C . PASS END=163633154;SVTYPE=DUP;SVLEN=6665 TR:VR 63:8 25:0 chr6 157310812 i_1096 G . PASS END=157310812;SVTYPE=INS;SVINSLEN=9001;SVINSSEQ=TGTGCCTACTTCACGGCCTCATCATAGTGTCCCAGTGTGTGCCTCACCTAGCCTCATCATAGTGCCCCAGTGTGCACTCACGTAGCCTCATCCTTAGTGTCCCAGTGTGCACTCACCTAGCCCTCATCATAGTGTCCCAGTGTGCACTCACCTAGCCTCATCATAGTGCGCCAGTGTGCACTCTTTCTAGCCTCATCATAGTGCCCCAGTGTGCACTCACCTGGCCTCATCATAGTGCCCCAGTGTGCACTCACCTGGCCTAATCATAGTGTCCCAGTGAGCACTCCTGGCCTAATCATAGTGTCCCAGTGTCCGCTTACCTAGCCTCATCCTTAGTGACCCAGTATCCGATCACCTAGATTCATCATAGTGCCCCAGTGTGTGCTCCACCCTAGCCTCATCACAGTGTCCCAGTGTGCACTCACCTAACCTCATCACAGTGCCCCAGTGTGCGCTCACCTAGCCTCATCATAGTGTCCCAGTGTACACACACCTGGCCTCATCATGGTGTCCCAGTGTGCGCTCACATAGCCTCATCAGAGGTGCCCCACAGTGTGCTCTCTTGAGCATCATCATAGGGTCCCAGTGTGCACTCACCCGGCCTCATCATAGGGTCCCAGTGTGCACTCACCAGGCAGCCCTCATCACAGTGTCCCAGTATGCGCTAACCTAGCCTCATCATAGTGCCCCAGTGTTGGCTCACCTAGCCTGATCATAGTCCCCCAGTGTGCACTCACATTGCCCCTCATCATACTGTCCCAGTGTGCACTCACCTGGCCTCATCATAGTGTCCCAGTGAGCACTCAACGGGCCTAATCATAGTGTCCCAGTACTCCGCTTACCTAGCCTCACCATAGTGGCCCAGTATCCGATCACCTACATTCATCATATTGTCCCAGTGTGCACTCACCTGGCCTCATCATAGTGCCCCAGTGTGTGATCATCTAGCCTCATCATAGTGTCCCAGTGTGCCCTCACCTAGCCTCATCATAGTATCCCAGTGTGCGCTCACCTGGCCTCATCCATAGTGTACCAGGTGTGCACTAACCCTAGCCTCATCATAGTGCCCCAGTGTGCGCTCACCTAGCCTCATCATAGTGTCCCAGTGTGCACTCACCTGGCCTCATCATAGTGTCCCAGTGGTCACTCACCTGGCCTCATCATAGTGCACGAGTGTGCGCTCACCTACCCTCATCCATACTGCCCCAGTGTGCTCTCACCCGTAGCCTCATCATAGTGTCTCAGTGTGGGCTCATCTAGCCTCCATCATAGGGTCCCAGTGTGCGCTCACCTGGCCTCATCATAGTGCGCCAGTGTGCGCTCATCAAGCCTCATCATAGTGTCTCAGTGTGCGCTCACCAGGCCTCATCACTGTGCCCGAATGGGCGCTCACCTGGCCTCATCATAGTGCCCAGTGTGCGCTCACCTACCCTCATCATAGTGGCCCAGTGAGCGCTCAGCTAGCCTCATTATAGTGTCCCAGTGTGTGCATTCAGCTAGCCTCATCATAGTGCCCAAGTGTCCGCTCACCTAGCCTCATCCTTACTGTCTCAGTGTGAGCTCACCCTGCCTCATCATAGTGTCCCAGTCTCTGCGCTCACCTAGCCTCATCCATAGTGCCCCCAGGGTGCACTCACCTAATATCATCAGAGTGTCCCAGTGTGCACTCACCTGGCCCTCATCATAGTATCCCAGAGTGCGCTCACGCCAGGCCTCATCATAGTGTCCCAGTGTGCGCTCACCGAACCCTCATCAGAGTGTCGCAGTGTGCGCTCACCTTACCTCATCATAGTGTCCCAGTGTGCGCTCGCCGGCCTCATCATGCAGTGTCCCAGTGTGCGCTCACCTAGCCTCATCAAAGTGTCCCAGTGTGCGCTCACCTGCCCTCCATCATAGTGCCCGAGTGTGCGCTCACCTAGCCTCATCATAGTGTCCCCAGTGTGCGCTCACCTAGCCTCAGCATAGTGTCCCTTTTATCCGCTCACCTAGCCTCATCAAAGTGCCCCAGTGTGCGCTCACCTAGCCTCATCACACTGCCCCAGTGTGCGCTCACCTAACCTCATCATAGTGTCCCATTGTGCGTTCACCTAGCCGCATCAGAGTGTCCCAGTGTGTGCTCACCCGGCCTCATCGCCATAGTGGCCCAGTGTACACTCACCTGGCCCCTCATTATACTGTCCCAGTGTGCACTCACCCGCACCTCATCTGTAGTGTCCCAGTGTGCACTCACCTAGCCTCATCATAGTGTCCCAGTGTGCACTCAGCTAGCCCTGATCATAGTGTCCCAGTGTGCACTCACCTAGCTAGCCTCATCATAGTGCCCCCAGGGTGCGCTCCAATCTGGCCTCATGATAGTGTCCGCAGTGTGCACTCGCCTAATCGTCATCATAGTGTCCCAGTGTGCAATCACCTAGCCTCATCATAGTGCGCCAGTGTCCGCTCACCTAGCCTCATCAAAGTGTCCCATTGTGTGCTCACCTAGCCTCCATCACAGTGCCCCAGTCGGCGCTCACCTAGCCTCATCATAGTGCCCCATTGTTCGCTCACCTAGCCTCATCATGAAGATTGTCCCAGTGGGCACTCACCTGGCCTCATAATAGTGTCCCAGTGTGCGCTCACCGTGCCTTCATCCATAGTGAACCAGTGTGCGCTCACCTAGCCTCATTATAGTGTCCCAGTGTGCGCTCACCTAGCCCCTCATCATAGTGTCACAGTGTGCACTCACCTAGACTCATCATAATGCCCCCAGTATCCGCTCACCTAGCCTCATCATAGTGTCCCAGTGAGCGCTCACCCGGCCTCATCATGGTGCCCCACTGTGCGCTCACCCGGCCTCATCCATAGTGTCCCACTGTGCGCTCACCTGGCCATATCATAGTGTCCCAGTAGCTGCGCTCACACTAGCACTCATCATAGTGCCCCAGTGTGCGCTCACCTGGCCTCATCATAGTGCCCCAGTATGCATTCACCTAGCCTCATCATAGTGTCCCCAGTGTGTGCACTCACCTAGCCTCATTATAGTGTCCCAGTGTGCTGGCTCACCCGACCTCATCATAGTGCTCCAGTGTGCACTCAGGTACCCTCATCATAGTGTCCCAGTGTGCACTCAGCCGGCCTCATCATAGTGTCCCAGTGTGCGCTCACCCAGCCTCGTCATAGTGCCCCAGTGTTCGCTCACCTGACCTCATCATGAGTGTCCCAGAGTGCCTCCACTTGGCCTCTACATCATAGATGTCCCAGTGGGCGCTCTGCCTGGCATCATCATAGTGTCCCAGTGTACGCTCACCTGGCCTCCATCATAGTGCCCCAGTGTGCGCTCACCCGGCCTCATCATAGTGCCCTCAGTGTGCGCTCATCTAGCCTCATCATAGTCTCCCAGTGTCCGCTCACCTAGCCTCATCATAGTATCCCAGTATGCACTCACCCGGCCTCACCATAGTGTCGCAGTGTGCATTCACCCGGCCTCATCATAGTGTCCCAGTGTGCGCTAACCTGAGCGTCATCATAGTGTCCCAGTGGTCTGCTCACATAGCCTCATCATAGTGCCCCAGTGTGCACTCACCTAGCCTCATCATAGTATCACAGTGTGCACTCACCTGGCCTCATCATAGTGTCTCAGTGTACACTCACCTGGCCTCATCATAGTGTCTCAGTGTGCTCTCACCTGGCCTCATCATAGTGTCCCAATGTCCGCTCACCTAGCCTGATCATAGTGCCCCAGTATCCGTTCACTTAGCCTCATCATAGTGCCCCAGTATCCGTTCACCTAGCCTCATCATAGTGTCCCAGTGTGCACTCACCTGGCCTCATCATAGTGTCCCAGTGTGCGCTAAACTAGTCTCATCATAGTTTCCCAGTGTGGGCTCACCTAGCCTCATCATAGTGCCCCACTGTCCACTCACCTAGCCTCATCATAGTGCCCCACTGTCCGCTCACCTAGCCTCATCATAGTGCCTGAGTTTGAACTCACTTAGGCTCATCATAGTGTCCCAGTGTGCGCTCACTGGCCGCATCATGGTGCCCCAGTGTGCACTCACCCAGCCTCATCATAGTGTCCCAGTGTGCACTCACCAGGCCTAATCATAATGCCCCAGTGTGCACTCCACCTAGCCTCATCATAGTGTCCCAGTGTGCGCTCACCTTGCGTCATCATAGTGTCCCAATGTGCGCTCACCCGGCCTCATCATAGTGTCCCAGTGTGCGCTCACCTAGCCTCATCATAGTGTCCCAGTGTGCGCTCACCTGGCCTCATCATAGTGCCCCAGTGTGCAGCTCACCTAGCCTCATCATAGTGTCCGATGTGCGCTCACCTAGCCTCATCATAGTGTCCCATTGTGCGTTCACCTAGCCTCATCATAGTGTCCCAGTGTGTGCTCACCCAGCCTCCATCATAGTGTCCCAGTGCGTGCACACCTAGCTTCATCATAGTATCCCAGTGTGTGACTCACCCGGCCTCATCATAGTGAATCAGTGTGCACTCTCCCGGCCTGATCATAGTGTCCAAGTGTGCACTCAACTAGCCTCACTGATAGTGTCCAAGTGTGCACTCACCTAGCCTCATCAGAGTGTCCCAGTGTCCGCTCACCCGGCCTCATCATAGTGCCCCAGTGTGCACTCTGACAGGCCTAATCATAACGCCCCAGTGTGCCTCCACCCTAGCCTCATCATAGTGTCCCAGTGTGCGCTCATCTTACCTCATCATAGTGCCCCAGTGTGCGCTCACCCGGCCTCATCATGAGTGCCCCACTATGCCCTCACCCCGGCCTCATGATAGTGTCCCAGTGTGCACTCACCTGGCCTGATCATAGTGTCCCAGTGTGCATTGACCCTAGCCTCATCATAGTGTCCCAGTGTGCGCTCACCTAGCCTCATCATAGTGTCCTTTTATCCGCTCACCTAGCCTCATCAAAGTGCCCCAGTGTGCGCTCAACTACCTCATCACTGGCCCCAGTATGCGCTCACCCTAACCTCATCATAGTGTCCCATTGTGCGTTCACCTAGCCTCATCAGAGTGTCCCAGAGTGTGCTCACCCAGCCTCATCATAGTACCTGGCCCAGTGTACACTCACCTGGCCTCATTATACTGTCCCAGTGTGCACTCACCCCGGCCTCATCCCTTAGTGTCCCAGTGTGCAGCTCACCTAGCCTCATCATAGTGTCCCAGTGTGCACTCAGCCTAGGCTCATCATGGTGTCCCAGTGTGCACTCACCTAGCCTCATCATAATGCCCCAGGGTGCGCTCATCGGGCCTCATGATAGTGTCGCAGTGTGCACTCACACGCCTCATCATAGTGTCCCAGTGTGCAATCACCTAGCCTCATCATAGTGCCCCAGTGTCCGCTCACCCTAGCCTCATCATAGTGCCCCAGTGTCCGCTCACCTAGCCTCGTCAAAGTGTCCCAGTGTGTGCTCACCTAGACTCATCACAGTGCCCCCAGTGTGCGGTAGCTCTAGCCTCATCATAGTGCCCCATTGTGCACCGCACCTAGCCTCATCATAGTGTCCCAGTGTGGGCTCACCCACATGGCCTCATAATAGTGTCCCAGTGTGCGCTCACCGTGCTTCATCATAGTGAACCAGTGTGTGCTCACCGTAGCCTCATTATAGTGTCCCAGTGTGCGCTCACCCGACCTCACTCCATAGTGTCGCCAGTGTGCACTCACCTAGGCTCATCATAATGCCCCAGTATAACGCTCACCTAGCCTCATCATAGTGTCCCAGTGTGCGCTCACCCGGCCTCATCATAGTGCCCCACTACGCGCTCATACCCGGACTCATCATCACATAGTGTCCCACTGTGCGCTCACCTGGCCACATCATAGTGCCCCAGTGTGCACTCACCTACCCTCAGCACTAGTGCCCCAGTGTACACTCAACCTGGCCTCATCCATAGTGCCCCAGTGAGCACTCACCTAGCCTCAGCATAGTGCCCCAGTGTGCCCTCAACTACCCTCAACATAGTGTGCCCCAGTGTGACACACCAGCCCCGTCATGAGTACCAGTGTTCCCTCACCTCAACTCATCATAGTGTCCTAGTGTCCGCTCACCTAGCCTCATCATAGTGTCCCAGTGTGCACTAATCCGGCCTCATCATAGTGTCCCAGTGTGCGCTCACCTAGCCCTCATCTTAGTGTCCCAGTGTGCACTCACCCGGAATTATCATAGTGCCTCAGTGTGCGCTCCATCTAGCCTCATCATGGTGTCCCAGTGTGCACTCACCTAGCCTCATCCATACTGCCCCAGTGTGCACTCACCCCTACCCAATCACTGTGTCCCAGTGTGTGCACTCACGGCGGAATTATCATAGTGTCCCAGTGTATCCCCCTAACCTAGCCTCATCACAGTGTCCCAGTGTGCACTCACATAGCCTCATCTATAGTGCCCCAGTGTGCACTCACCTAGCCTCACTCATATGGTACCCAGTGTGTGCTCACCTAGCCTCATCATAGTGCCCCATTGTGCACTCACCTAGCCTCATCATAGTGTACCAGTGTACACTCACCTGGCCTCATCACATGATGTCTCAGTGTGCTGCTAACATGGCCTCATCATAGTGTCCCAGTGTCTGATCACCTGGCACTGATCACAGAGTGCCCCAGTGTGCACTCACTTAACCTCATCATAGTGTCCCAGTATCAACTCTATACTAGCCTACATCATAGTGTCCCAGTGTGCACACCTAGCCTCATCATAGTGTCCCAGTGTGCGCTAAACTAGTCTCATCAGAGTTCCCAGTGTGGGCTCACCCTAGCCTCATCATAGTGCCCCAGTGTCCACACTCACATAGCCTCACCAAAAGTGTCTCCCACTGTGAAGCTCCACCTAGTCCTCATCATAGTGCCCCAGTGTGAACTCACTTAGCCTCCTCATAGGTTTAAACAGTGTGCGCTCACCCCACCCACGCATCATAGTGCCCCAGTGTGCACTCACCTAGCCTCATCATAGTGGTCCAGTGTGCACTCTCCAGGCTTCATCATAGTGCTCCAGTGTGCACTCACCTCAGCCTCATCATAGCTGCCCCAGTGTGCACTCACCTAGCCTCATCATGGTGTCCCACTGTGCGATCACCTAGCCTCATCATAGTGTCCGAGTGTGCGCTCACCTAGCCTCATCTTAGTGACTCAAGCAATCCTCTCTGCCTCAGCCTCATCAAAGTGCCCCAGTGTGCAGGCATGAGCCACTCATCCACCTGCCCCAGTGTACTCACTATCCTCATGGCAAAGTGTCCCAAAAACAAATCACCTACTCTCATCATAGGGTCCCAGTGTGTAATTTTAAAATTTAAATATAGTGCCCCAGTTAAAGCTCACTAGCCTCAACTAAGGACAGTGTGCACTCTGATGGTTTTTCATCATAGTTGAGGTGTGCGCTCCTGTGAGCCTCATCAGCTGTCCCATTGTGCGCTCACCTGGCCTACTATCACTAGTGCATCATGCGCTCACATAGCCTCATCAGAGGCCCCAGTAAAGGTCACCAATGTTCATTCTGCCAGTCCTATTTGAGATAACCTACCCTCCCACAAACCCAGTGCACAGGTCCACCAGACCTCATGCATACCCCCCATAAAGTTCTCACCATAACCTCAACATAGTGTCCCATTGTTTAGACCTAGCCTCAATGTAGTCTCCCAGTGTGGGCTCAAAAAGCCTCATCATAGTGCTAGAGTGTACAAATCACCTAAGCCTCAGAATCCTTCCAGTGTCAACACGTACTATAAATCATCATAGTGTCCCAGTGTAAAAGTCACCCTAGCCTCATCTTGTGTCCCAGTGTGCGCTCACCATAGCCTCATCATAGTGTCCTTTTGTGCACTTTGATAGTTAGGGATAGAGTCCCAGTGCTTACTACAAGAGTTCCTTAAATCATAGTACCCCAACTGCGCTCTCCAGCCTCATCATATCTGTCAGTGTGCACTCACCTAGCCTCATCATAGTGTCCCAGTGTGCACTCACCTGGGTCCTCATCATAGTGTCCCAGTGTGCGCTCACCTGGCCTCATCATAGTGTCCCAGTGTGCACTCACCTAGCCTCATCACAGTGCCCCAGTGTGTGCTCACCTGGCCTCATCATAGTGTCCCAGTGTACACTCACCTGGCCTCATCATAGTATCCCAGTGTGCAGCCCACCTAGCCTCATCATAGTGCCCCAGTGTGCGCTCACCCGGCCTCATCATAGTGCCCCAGTGTGCCCTCACCGAGCCTCATCATAGTGTCCCAGTGTTCGCTCACCCCGGCCTCGATCATAGTGTCCCAGTGTGCGCTCACCTAGCCTCATCATAGTGCCCCAGTGTGCACTCACCTAGCCTCATCATAGTGTCCCAGTGTGCGCTCACCTAGCCTCATCATAGTGTCCCAGTGTGCACTCACCCGGCCTCATCATAGTGTCCCAGTGTGCACTCACCCGGCCTCATCATAGTGTCCCAGTGTGCGCTCACCTAGCCTCATCATAGTGTCCCAGTGTGCACTCACCTAGCCTCATCATAGTGTCCCAGTGTGCACTCACCTAGCCTCATCATAGTGCCCCAGTGTGCACCTCACCTAGCCTCATCATAGTGTCCCAGTGTGCGCTCACCTAGCCTCATCATAGTGCCCCAGTGTGCGCTCACCTGGCCTCATCATAGTGCCCCAGTGTGCATTCACCTGGCCTCATCATAGTGTCCCAGTGTGCACTCACCTGGCCTAATCATAGTGTCCCAGTGTCCGCTTACCTAGCCTCATCATAGTGGCCCAGTGTGCGATCACCTGGCCTCATCATAGTGCCCCAGTGTGTGCTCACCTAGCCTCATCATAGTGTCCCAGTGTGCACTCACCTAGCCTCATCATAGTGCCCCAGTGTGCGCTCACCTAGCCTCATCATAGTGTCCCAGTGTGCACTCACCTGGCCTCATCATAGTGTCCCAGTGTGCGCTCACCTAGCCTCATCAGAGTGCCCCAGTGTGCGCTCACCCGGCCTCATCATAGTGTCCCAGTGTGCACTCACCCGGCCTCATCATAGTGTCCACT TR:VR 85:5 43:1 chr7 134908897 d_1470 G . PASS END=134908961;SVTYPE=DEL;SVLEN=-64 TR:VR 38:18 11:0 chrX 66588422 d_1741 C . Too_small_size END=66588461;SVTYPE=DEL;SVLEN=-39 TR:VR 31:4 22:0 chr1 207916311 d_206 T . PASS END=207916380;SVTYPE=DEL;SVLEN=-69 TR:VR 57:10 15:0 chr10 23790625 d_248 A . PASS END=23791680;SVTYPE=DEL;SVLEN=-1055;SVINSLEN=154;SVINSSEQ=TATATACATATATACATGTGCATATATACATATATACATGTGCATATATACATATATACATGTGCATATATACATATGTATATATACATATATACATATACATGTGCATATATACATATGTACATATGTATATATACATATGTATATGTACATA TR:VR 52:5 18:0 chr11 12984952 r_141 A . PASS END=12988686;SVTYPE=DUP;SVLEN=3734 TR:VR 21:4 20:0 chr12 69229463 r_209_0 A ACACATATAATATAT]chr3:127041650] . PASS SVTYPE=BND;MATEID=r_209_1;SVINSLEN=14;SVINSSEQ=CACATATAATATAT TR:VR 82:10 32:0 chr3 127041650 r_209_1 C CATATATTATATGTG]chr12:69229463] . PASS SVTYPE=BND;MATEID=r_209_0;SVINSLEN=14;SVINSSEQ=ATATATTATATGTG TR:VR 82:10 32:0 chr13 32985163 r_242 G . Too_low_VAF END=33322324;SVTYPE=DUP;SVLEN=337161;SVINSLEN=18;SVINSSEQ=GATGATGGATGGATACAC TR:VR 67:3 39:0 chr14 21183504 i_281 G . PASS END=21183504;SVTYPE=INS;SVINSLEN=193;SVINSSEQ=CATATACTCCATATATACATATGTGTGCATATACTCCATATATACATATGTGTGCATATACTCCATATATATACATATGTGTGCATATACTCCCATATATACATATGTGTGCATATACTCCATATATACATATGTGTGCATATACTCCATATATACATATGTGTGCATATACTCCATATATACATATGTGTAC TR:VR 44:4 32:0 chr14 94519670 d_463 G . PASS END=94519667;SVTYPE=INS;SVINSLEN=147;SVINSSEQ=TATTGATAATAACTGGGGCGGTGGTAGTCATGGTGGTGATTATAGTTATGGTGATGACAGTGGTGGCGATGGAGAGGCTGGTGATGGTGGTGCTGGTGATGGTGATGACAGAGCTGGTGGTGGTGACAGTGGTGATAATAGTTGTGG TR:VR 90:7 13:0 chr15 93068143 d_647 A . Too_small_size END=93068183;SVTYPE=DEL;SVLEN=-40 TR:VR 37:7 26:0 chr17 6780342 r_351_0 G [chr17:73332673[A . Too_low_VAF SVTYPE=BND;MATEID=r_351_1 TR:VR 106:4 50:0 chr17 73332673 r_351_1 A [chr17:6780342[A . Too_low_VAF SVTYPE=BND;MATEID=r_351_0 TR:VR 106:4 50:0 chr19 31567533 r_429_0 A A[chr21:19340923[ . PASS SVTYPE=BND;MATEID=r_429_1 TR:VR 73:9 46:0 chr21 19340923 r_429_1 T ]chr19:31567533]T . PASS SVTYPE=BND;MATEID=r_429_0 TR:VR 73:9 46:0 chr2 27219267 r_444 T . PASS END=27938519;SVTYPE=DUP;SVLEN=719252 TR:VR 111:30 46:0 chr2 89789122 d_927 T . Too_low_VAF END=89791493;SVTYPE=DEL;SVLEN=-2371;SVINSLEN=37;SVINSSEQ=CCATTCAATGATTCCATTCTGTTCCATTTGATGTTGT TR:VR 87:3 55:1 chr21 36270558 d_1141 A . PASS END=36270613;SVTYPE=DEL;SVLEN=-55 TR:VR 35:4 24:0 chr3 100132467 r_567 A . PASS END=187516127;SVTYPE=DEL;SVLEN=-87383660 TR:VR 60:10 45:0 chr5 55399868 r_640 A . PASS END=55413698;SVTYPE=DUP;SVLEN=13830 TR:VR 53:4 30:0 chr7 136047977 r_737 T . PASS END=136085483;SVTYPE=DUP;SVLEN=37506 TR:VR 69:8 40:0 chr7 67180407 r_728_0 T [chr7:72632500[A . Too_low_VAF SVTYPE=BND;MATEID=r_728_1 TR:VR 71:3 43:1 chr7 72632500 r_728_1 A [chr7:67180407[A . Too_low_VAF SVTYPE=BND;MATEID=r_728_0 TR:VR 71:3 43:1 chr8 130897963 i_1234 C . PASS END=130897963;SVTYPE=INS;SVINSLEN=277;SVINSSEQ=ATACATACACATATACATACACACCACACACACATACACATACACACCACACACATACATACACACCACACACACATACACATACACACCACACACATACATACACACCACACACACACATATACATACACACCACACACACATATATACACACAACAAACACACCACACATACTTACACATATACATACACACCACACACACATATATACACACTACACACACACACCACACCACACATACATATACATATACACACATATACATACACACCATAC TR:VR 100:6 24:0 chr8 43242042 i_1197 A . Too_low_VAF END=43242042;SVTYPE=INS;SVINSLEN=4115;SVINSSEQ=CATATTACATACTGTACCCAAAATATCAAACTAGACGAAATACATATTATATACTGTACCTAAAATATCAAAGTACACATAATACATATTACATACTGTACCTAAAATATCAAAGTACACCAAATACATATTACATACTGTACCTAAAATATCAAAGTTCACCAAATACATATTTTATACTGTACCTAAAATATCAAAGTACAACAAATACATATTACATACTGTACCTAAAATATCAAATACACCAAATACATATTACATACTGTACCTAAAATATCAAAGTACACCAAATACATATTATATACTGTACATAAAATATCAAAGTATGCCAAAAACATATATACTGTACATAAAATATGAAAATTTACCCCAAATACATATTATATACTGTACATAAAACATCAAAAAGTACACCAAATACATATTATATACTGTACATAAAATATCACAAAGTACGCCAAATACATATTTTCTACTGTACATAAAATATCAAAAAGTACACCAAATATATATTATATAGTGTACATAAAATATCACAAAGAACACCAAATATATATTATATAATGTACATGAAATATCAAAAAGTACACCAAATATATATTATATACTGTACATCAAATATCAAAAAGTACACTAAATATATATTATATACTGTACATCAAATATCAAAAAGTACACCAAATACATATCATATACTGTACATCAAAAATCAAATAGCACACCAAATACATATTATGTACTGTACACCAAATATCAAATAGTACATCAAATACATAGTATGTACTGTACATCAAATATCAAATAGTACACCAAATATATATTATATACTGTACACAAAATATCAAAAAGTACACCAAATATATATTATATACTGTACATTAAATATCAAAATGTACACCAAATATATATTATATACTGTACATAAAAATCAAAGTATACAAAATACATATTTTATACTGTACATAAAATATCAAAGTACACAAAATAAATGTTATATACTGTTTATAAAATATCAAAGTACACCAAACACATATTTTACACTGTACATAAAATATCAAAGTACACCAAATACATATTATACACTGTACATAAAATATGAAAGTACACCAAATACATATTATATACTGTACATAAAATATCAAAGTACACCAAATACATATTATATACTGTACATAAAATATCAAAGTACACAAAATACATATTATATACTGTACATAACATATCAAAGTACATGAAATATATATTACATACTGTACATAAAATATCAAAGTACACGAAATATATATTATATGCTGTACATAAGATATCAAAGTACACCAAATATATACTGTACATAAAATATCAAAGTACACCAGGTACATATTATTTACTGTACATAAAATATCAAAGTATACCAGATACATATTATATACTGTACATAATATATCAAAGTACCCCAGATACATATTATATATTGAACATAAAATATCAACATATACCAGATACATATTATTTACTGTACATAATATATCAAAGTACACCAAATTCATATTATATACTGTACATAAAATATGAATGTACACCAAATACATATTATATAATGTACAAAAAATATCAAAGTACAGCAAATACATATTTTATACTGCACATAAAATATCAAAATTACACCAAATACATATTATATACTGTACATAAAATATCAAAAAGTACACCAAATATATTAAATACTGTACATAAAATATCAAAGTACACCAAATACATATTATATACTGTATATAAAATATCAAAATACAGCAAATACATATTATATACTGCACCTAAAATATCAAAAAGCACACCAAATACATATTATATACTGTACATAAAATATCAAAAAGTACACCAAATATATATTATATAATGTACATAAAATATCAAAAAAGTACACCAAATATATATTATATACTGTACATAAAATATCAAAGTACACCAAATGTATATTACATACTGTACATTAAATATCAAAAAGTACTCCAGATATATATTATATACTGTACATAAAATATCAAAGTATACAAAATACATATTATATACTGTACATAAAATAAGAAAGTACACAAAATACATATTATATACTGTACATAAAATATCAAAGTACACAAAATACATATTATATACTGTACATAAAATATCAAAGTACACAGAATACATATTATATACTGTACATAAAATATCAAATTACACAAAATATATATTATATACTGTACATAAAATATCAAAGTACACAAAATATATATTATATACTGTACTTAAAATATAAATGCAAACAAAATACATATTATATACTGTAAATAAATATCAAAGTACACCAAATACATATTATGTACTGTACATAAAATATCAAAGTACACAAAATACATACTATATACTGTACATAAAATATCAAAGTACACCAAATACATATTATATTCTGTACATAAAATATCAAAGTACACCAAATATATATTATATTCTGTACATAAAATATCAAAGTACTCAGACTACATATTATATACTGTACATAAAATATCAAACTACACCAAATACATATTATATACTGTACATAAAATATCAAACTACACCAAATACCTATTATATACTGTACATGAAATATCAAAGTACACAAAATACATATTATATACTGTACATAACATATCAAAGTACATGAAATATATATTATATACTATACATAAAATATCAAAGTATACGAAATATATATTATATACTGTACATAAAATATCAAAGTACACCAAATATGTATTTTATACTGTACATAAAATATCAAAGTCCACCAGGTACATATTATTTACTGTACATAATATATCAAAGTACAGCGGATACATATTTTTTACTGTACATAAAATATCAAAGTATACCAGATACATATTATATACTGTACATAATATATCAAAGTACACCAGATACATATTATATACTGTACATAAAATATCAAAGTACACAAGATACATATTATTTACTGTACATAATGTATCAAAGTACATCAAATACATATTATATACTGTACATAAAATATCAAAGTACACCAAATACATGTTATATAGTGTACATAAAATATCAAAGTACTCCAAATACTTATTATATACTGAATATAAAATATCAAAGTACAGCAAATACATATTATATACTGTACATAAATTATCAAAGTACAGCAAATACATATTATATACTGTACATAAAATATCAAAAATACACCAAATATATATTATATACTGTACATAAAATATCAAAGTACACCAAATACATATTATATACTCTACATAAAATATCAAAGTACAGCAAATATATATTATATACTGCACATAAAATATCAAAAAGTACAGCAAATACAGATTATATACTGTACATAAAATACCAAAAAGTACACCAAATATATATTATATACTGTACATTAAATATCAAAAAGTACAACAAATATATATTATATAATGTACATAAAATATCAAATTGTACAAAATACATATTATATACTGTTCATAAAATATCAAAGTACCCATAATACATATTATATACTGTATATAAAATATCAAAGTACACAAAGTACATATTATATAGTGTACATAAATTATGAAAGTACACAAATTACATATTATATACTGTACATAAAATATCAAAGTACACAAAATATATATTATAGACTGTACATAAAATATCAAACTACACACAATATATATTATAGATTGTACATAAAATATCAAAGTACACAAAATACATATTATATACTTTAAAAAAATATCAAAGTACACAAAATACATATTATATACTGTACATAAAATATCAAAGTACACAAAATACATATTATATACTGTACATAAAATATCAAAGTACACAAAATATATATTATATACTGTACATAAAATATCAAAATACACGAAATACGAATTATATACTGTACATAAAATATCAAAGTATGCAAAATACATATTATATGCTGTACATAAAATATCAAAGTGCACCAAATACATATTATATACTGTACATAAAATATCAAAGTACACAAAATATATATTATATACTGTACATAAAATATCAAAGCACTCAAAATACATATTGTATACTGTACTTAAAATATCAAAGTAAACCAAATATATATTATATAC TR:VR 345:3 129:0 chr8 96344984 d_1529 C . PASS END=96345145;SVTYPE=DEL;SVLEN=-161 TR:VR 77:7 20:0 chrX 68320697 d_1742 C . Too_small_size END=68320738;SVTYPE=DEL;SVLEN=-41 TR:VR 32:10 18:0 chr10 26470000 r_101 G . PASS END=26481692;SVTYPE=DUP;SVLEN=11692;SVINSLEN=4;SVINSSEQ=ATAT TR:VR 89:21 23:0 chr11 76355982 r_161_0 G ]chr16:9650552]A . PASS SVTYPE=BND;MATEID=r_161_1 TR:VR 86:11 31:0 chr16 9650552 r_161_1 A A[chr11:76355982[ . PASS SVTYPE=BND;MATEID=r_161_0 TR:VR 86:11 31:0 chr12 69240070 r_210_0 T ]chr6:122674867]T . PASS SVTYPE=BND;MATEID=r_210_1 TR:VR 78:8 43:0 chr6 122674867 r_210_1 T T[chr12:69240070[ . PASS SVTYPE=BND;MATEID=r_210_0 TR:VR 78:8 43:0 chr14 21402184 d_434 C . PASS END=21402710;SVTYPE=DEL;SVLEN=-526 TR:VR 39:18 20:0 chr15 96190336 d_648 C . PASS END=96190384;SVTYPE=DEL;SVLEN=-48 TR:VR 39:26 22:0 chr17 67992960 d_793 G . Too_small_size END=67993003;SVTYPE=DEL;SVLEN=-43 TR:VR 89:10 18:0 chr2 28140239 r_445_0 C ]chr5:164119597]T . PASS SVTYPE=BND;MATEID=r_445_1 TR:VR 101:7 47:0 chr5 164119597 r_445_1 T T[chr2:28140239[ . PASS SVTYPE=BND;MATEID=r_445_0 TR:VR 101:7 47:0 chr7 139991211 r_738 A . PASS END=140015108;SVTYPE=DUP;SVLEN=23897 TR:VR 59:10 45:0 chr8 96728888 r_762 T . Too_low_VAF END=97297351;SVTYPE=DUP;SVLEN=568463 TR:VR 210:7 27:0 chr9 6350271 d_1578 A . PASS END=6351364;SVTYPE=DEL;SVLEN=-1093 TR:VR 14:4 17:0 chrX 129883673 d_1753 T . PASS END=129885760;SVTYPE=DEL;SVLEN=-2087 TR:VR 27:5 24:0 chr1 143259878 d_185 T . Too_low_VAF END=143260002;SVTYPE=DEL;SVLEN=-124 TR:VR 335:7 132:1 chr11 76365851 r_162_0 C C[chr16:9650419[ . PASS SVTYPE=BND;MATEID=r_162_1 TR:VR 93:10 33:0 chr16 9650419 r_162_1 T ]chr11:76365851]T . PASS SVTYPE=BND;MATEID=r_162_0 TR:VR 93:10 33:0 chr12 13198819 r_190 A . PASS END=13214409;SVTYPE=DUP;SVLEN=15590 TR:VR 56:3 25:0 chr13 35639677 r_243_0 A ]chr6:9451698]C . PASS SVTYPE=BND;MATEID=r_243_1 TR:VR 68:9 38:0 chr6 9451698 r_243_1 C C[chr13:35639677[ . PASS SVTYPE=BND;MATEID=r_243_0 TR:VR 68:9 38:0 chr14 23793559 r_260 A . PASS END=23798452;SVTYPE=DUP;SVLEN=4893 TR:VR 39:5 17:0 chr15 98270740 r_312 A . PASS END=98283150;SVTYPE=DUP;SVLEN=12410 TR:VR 57:4 25:0 chr17 315856 i_421 T . PASS END=315856;SVTYPE=INS;SVINSLEN=187;SVINSSEQ=AGTCCCTGTGTTCCACCTCCATTGACCTGTAGTCCCTGTGTCCCCACCTCCATTGACCTGTAGTCTCTGTGACCTCCCACCTACATTGACCTGTAGTCCCTGTGACCCCACCTCCATTGACCTGTAGTCTCTGTGCTCCACCTCCATTGACCTGTAGTCCCTGTGACTCCACCTCCACTGACCTGCA TR:VR 56:3 28:0 chr2 169624879 r_489_0 C [chr8:81323298[T . Too_low_VAF SVTYPE=BND;MATEID=r_489_1 TR:VR 133:6 33:0 chr8 81323298 r_489_1 T [chr2:169624879[T . Too_low_VAF SVTYPE=BND;MATEID=r_489_0 TR:VR 133:6 33:0 chr2 28883567 r_446_0 A A]chr5:172060155] . PASS SVTYPE=BND;MATEID=r_446_1 TR:VR 103:26 38:0 chr5 172060155 r_446_1 C C]chr2:28883567] . PASS SVTYPE=BND;MATEID=r_446_0 TR:VR 103:26 38:0 chr3 101019432 d_1214 T . Too_small_size END=101019467;SVTYPE=DEL;SVLEN=-35 TR:VR 43:13 19:0 chr3 96786757 r_565_0 T ]chr4:130234065]A . PASS SVTYPE=BND;MATEID=r_565_1 TR:VR 74:6 35:0 chr4 130234065 r_565_1 A A[chr3:96786757[ . PASS SVTYPE=BND;MATEID=r_565_0 TR:VR 74:6 35:0 chr4 183596461 d_1302 C . PASS END=183596657;SVTYPE=DEL;SVLEN=-196 TR:VR 29:8 24:0 chr4 35590139 r_591 T . PASS END=35609940;SVTYPE=DUP;SVLEN=19801 TR:VR 46:3 29:0 chr6 32587397 r_688_0 A [chr8:58198565[AAAAAAAAGAAAAGGAAT . Too_low_VAF SVTYPE=BND;MATEID=r_688_1;SVINSLEN=17;SVINSSEQ=AAAAAAAAGAAAAGGAA TR:VR 162:4 53:0 chr8 58198565 r_688_1 T [chr6:32587397[TTCCTTTTCTTTTTTTTT . Too_low_VAF SVTYPE=BND;MATEID=r_688_0;SVINSLEN=17;SVINSSEQ=TTCCTTTTCTTTTTTTT TR:VR 162:4 53:0 chr8 96947127 r_763 T . Too_low_VAF END=98150490;SVTYPE=DUP;SVLEN=1203363 TR:VR 195:6 39:0 chr1 143259878 d_186 T . Too_low_VAF END=143260338;SVTYPE=DEL;SVLEN=-460 TR:VR 337:6 133:0 chr12 69240386 r_212_0 T T]chr13:104801892] . PASS SVTYPE=BND;MATEID=r_212_1 TR:VR 83:8 41:0 chr13 104801892 r_212_1 A A]chr12:69240386] . PASS SVTYPE=BND;MATEID=r_212_0 TR:VR 83:8 41:0 chr14_GL000225v1_random 56552 d_507 T . Too_low_VAF END=56717;SVTYPE=DEL;SVLEN=-165;SVINSLEN=30;SVINSSEQ=ACGTCACAATAACCCCAGTAGGTGGAGCCT TR:VR 616:5 491:1 chr15 98576385 d_649 T . PASS END=98576520;SVTYPE=DEL;SVLEN=-135 TR:VR 49:33 25:0 chr17 68003212 d_795 C . Too_low_VAF END=68003353;SVTYPE=DEL;SVLEN=-141 TR:VR 98:4 23:0 chr3 96823665 r_566_0 T T[chrX:51607441[ . PASS SVTYPE=BND;MATEID=r_566_1 TR:VR 81:6 38:0 chrX 51607441 r_566_1 T ]chr3:96823665]T . PASS SVTYPE=BND;MATEID=r_566_0 TR:VR 81:6 38:0 chr5 59412994 r_641 G . PASS END=59456081;SVTYPE=DUP;SVLEN=43087 TR:VR 74:9 27:0 chrX 71005166 d_1743 G . PASS END=71005226;SVTYPE=DEL;SVLEN=-60 TR:VR 27:7 14:0 chr1 247598492 r_89 A . Too_low_VAF END=247640162;SVTYPE=DUP;SVLEN=41670;SVINSLEN=39;SVINSSEQ=GTTTGGAAAAGTCCAACAGGCTGGACTTTGGAAAAAGTC TR:VR 137:6 39:0 chr1 85363406 d_25 T . Too_small_size END=85363448;SVTYPE=DEL;SVLEN=-42 TR:VR 39:30 24:0 chr11 14463062 d_313 C . PASS END=14463152;SVTYPE=DEL;SVLEN=-90 TR:VR 39:11 13:0 chr11 76994438 r_163 A . PASS END=77002668;SVTYPE=DUP;SVLEN=8230 TR:VR 47:4 24:0 chr13 37807809 d_403 G . Too_small_size END=37807853;SVTYPE=DEL;SVLEN=-44 TR:VR 22:5 22:0 chr14 26540141 d_435 T . PASS END=26540701;SVTYPE=DEL;SVLEN=-560 TR:VR 39:5 15:0 chr14 94684119 r_284_0 G G[chr21:8219514[ . Too_low_VAF SVTYPE=BND;MATEID=r_284_1 TR:VR 559:8 529:0 chr21 8219514 r_284_1 T ]chr14:94684119]T . Too_low_VAF SVTYPE=BND;MATEID=r_284_0 TR:VR 559:8 529:0 chr15 99721219 r_313_0 A ]chr2:194783906]A . PASS SVTYPE=BND;MATEID=r_313_1 TR:VR 84:10 36:0 chr2 194783906 r_313_1 A A[chr15:99721219[ . PASS SVTYPE=BND;MATEID=r_313_0 TR:VR 84:10 36:0 chr17 68004965 i_449 G . Too_low_VAF END=68004965;SVTYPE=INS;SVINSLEN=85;SVINSSEQ=AGAGGCCCGGCACAGTGGCTCATGCCTGTAATGCTAGCACTTTGGGAGGCCAAGGTGGGTGGATCACTTGAGGCCAGGAGTTCAA TR:VR 97:3 20:0 chr4 185075163 r_621 A . PASS END=185471191;SVTYPE=DUP;SVLEN=396028;SVINSLEN=1;SVINSSEQ=T TR:VR 60:8 42:0 chr4 37102228 i_916 T . PASS END=37102280;SVTYPE=DEL;SVLEN=-52 TR:VR 55:7 18:0 chr6 158200403 d_1418 T . PASS END=158205739;SVTYPE=DEL;SVLEN=-5336 TR:VR 60:8 21:0 chr8 99305303 r_764 T . PASS END=99309684;SVTYPE=DUP;SVLEN=4381 TR:VR 116:34 22:0 chr9 69271891 d_1586 T . PASS END=69271953;SVTYPE=DEL;SVLEN=-62 TR:VR 18:3 19:0 chr11 77587559 i_183 T . PASS END=77587559;SVTYPE=INS;SVINSLEN=356;SVINSSEQ=AACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAGCTTAGAGTATAATAAAAAAAAAAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 41:3 19:0 chr12 71266617 d_368 C . PASS END=71266729;SVTYPE=DEL;SVLEN=-112 TR:VR 48:18 18:0 chr13 41350716 i_256 G . Too_small_size END=41350716;SVTYPE=INS;SVINSLEN=42;SVINSSEQ=CTCAAGCGATTCTCCTGCCTTAGCCTCCCAAGTAGCTGGGAC TR:VR 33:8 18:0 chr14 29913053 r_261 T . PASS END=75620882;SVTYPE=DUP;SVLEN=45707829 TR:VR 68:9 48:0 chr15 99721440 r_314_0 G G[chr22:35047457[ . PASS SVTYPE=BND;MATEID=r_314_1 TR:VR 73:10 39:0 chr22 35047457 r_314_1 A ]chr15:99721440]A . PASS SVTYPE=BND;MATEID=r_314_0 TR:VR 73:10 39:0 chr17 68005095 d_796 G . Too_low_VAF END=68005220;SVTYPE=INS;SVINSLEN=183;SVINSSEQ=TTTGAAACCAGCCTAAGCAACATGGCAAAATCCCATCTCTATTAATTAAAAAAAAAAGAAGAAGAAGAAGAAGAGGGGAAGGAGAACGGAAGGAAGATCGGCCGGGCGCAGTGGCTCACGCCTGTAATGCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCACCTGAGGTCAGGAGTTTGAGA TR:VR 103:3 21:0 chr19 33942625 d_865 G . PASS END=33942700;SVTYPE=DEL;SVLEN=-75 TR:VR 40:18 19:0 chr2 29565462 r_447 A . PASS END=29567653;SVTYPE=DUP;SVLEN=2191 TR:VR 37:8 22:0 chr20 14943323 r_513 A . PASS END=14949346;SVTYPE=DUP;SVLEN=6023 TR:VR 55:3 23:0 chr4 38490415 i_917 A . PASS END=38490415;SVTYPE=INS;SVINSLEN=200;SVINSSEQ=AGTGCCTGCTGCTCTAGTGTAAACGTGGACGTTCACTTAAGAAGTCAGGCTGTCTAGAGGATGAACGCTGATCAGACAGGATGGAATAATTAGGACAGAGAGCTCTGACAGTGCTTACCAGCTGGGACAGTCAGAGGCTGTTTGCTCCCCAGTCCCAAGGCGAACAGAGGCTCCTTGTCTGGAAGGAGCCAGCAGGGAGA TR:VR 28:9 17:0 chr5 60043649 d_1348 G . PASS END=60043846;SVTYPE=DEL;SVLEN=-197 TR:VR 35:5 27:0 chr9 100048981 d_1592 A . PASS END=100049214;SVTYPE=DEL;SVLEN=-233;SVINSLEN=10;SVINSSEQ=CATTTATGTT TR:VR 23:5 14:0 chr9 725885 r_793 A . PASS END=1027035;SVTYPE=DUP;SVLEN=301150 TR:VR 32:4 56:0 chr11 77770551 r_164 A . Too_low_VAF END=78665375;SVTYPE=DUP;SVLEN=894824 TR:VR 103:3 27:0 chr14 95247931 r_285 C . PASS END=95281759;SVTYPE=DUP;SVLEN=33828 TR:VR 72:16 38:0 chr15 99867996 d_650 T . Too_small_size END=99868040;SVTYPE=DEL;SVLEN=-44 TR:VR 30:5 16:0 chr17 35001032 r_364 G . PASS END=36130863;SVTYPE=DUP;SVLEN=1129831 TR:VR 72:11 41:0 chr17 6801335 r_352_0 C C]chr17:73332649] . PASS SVTYPE=BND;MATEID=r_352_1 TR:VR 109:12 48:0 chr17 73332649 r_352_1 G G]chr17:6801335] . PASS SVTYPE=BND;MATEID=r_352_0 TR:VR 109:12 48:0 chr18 27963569 r_419 A . PASS END=28145156;SVTYPE=DEL;SVLEN=-181587;SVINSLEN=1;SVINSSEQ=C TR:VR 58:10 43:0 chr4 39168999 r_592_0 T [chrX:53412924[T . Too_low_VAF SVTYPE=BND;MATEID=r_592_1 TR:VR 68:3 27:0 chrX 53412924 r_592_1 T [chr4:39168999[T . Too_low_VAF SVTYPE=BND;MATEID=r_592_0 TR:VR 68:3 27:0 chr6 159638496 r_717 C . PASS END=159643507;SVTYPE=DUP;SVLEN=5011 TR:VR 55:5 25:0 chr7 142460085 r_739 T . PASS END=142476580;SVTYPE=DUP;SVLEN=16495 TR:VR 52:5 28:0 chr8 43643101 d_1503 G . PASS END=43643119;SVTYPE=INS;SVINSLEN=99;SVINSSEQ=ATGTGTGGATTCATCTCACAGAGTGAAACCATACTTTTGATTCAACAGGTTAGAAACCCTCTTCTTATAGAATCTGTGAAAGGACTTCAGGACCCCATT TR:VR 81:6 23:0 chr9 10160016 d_1579 T . PASS END=10160095;SVTYPE=DEL;SVLEN=-79 TR:VR 15:10 17:0 chrX 135747572 r_830 T . PASS END=135748588;SVTYPE=DEL;SVLEN=-1016;SVINSLEN=1;SVINSSEQ=G TR:VR 32:6 23:0 chrX 86910660 d_1744 A . PASS END=86910753;SVTYPE=DEL;SVLEN=-93 TR:VR 35:10 17:0 chr1 212087544 d_209 T . PASS END=212089535;SVTYPE=DEL;SVLEN=-1991 TR:VR 77:12 24:0 chr11 78267769 r_165_0 A ]chr8:144513266]G . PASS SVTYPE=BND;MATEID=r_165_1 TR:VR 137:9 41:0 chr8 144513266 r_165_1 G G[chr11:78267769[ . PASS SVTYPE=BND;MATEID=r_165_0 TR:VR 137:9 41:0 chr16 89704830 d_737 A . Too_small_size END=89704867;SVTYPE=DEL;SVLEN=-37 TR:VR 43:9 22:0 chr20 31161759 i_758 G . PASS END=31161759;SVTYPE=INS;SVINSLEN=136;SVINSSEQ=AACGGAATGGAATTGAATGGAATGGAATGGAATGGACCCTAATGGAATGGAATGGAATGGGATCGAATGGAATGGAATGGAATGGAATGGATTGGAATGGAATTGCACGGAATGGAATGGAATGGAATGGTATCAA TR:VR 39:3 11:0 chr4 102794089 d_1282 A . PASS END=102794211;SVTYPE=DEL;SVLEN=-122 TR:VR 37:6 17:0 chr4 39184543 r_593_0 T T]chrX:53413105] . PASS SVTYPE=BND;MATEID=r_593_1 TR:VR 71:4 25:0 chrX 53413105 r_593_1 C C]chr4:39184543] . PASS SVTYPE=BND;MATEID=r_593_0 TR:VR 71:4 25:0 chr4 89990508 r_601_0 A [chr7:35863223[A . PASS SVTYPE=BND;MATEID=r_601_1 TR:VR 74:7 42:0 chr7 35863223 r_601_1 A [chr4:89990508[A . PASS SVTYPE=BND;MATEID=r_601_0 TR:VR 74:7 42:0 chr5 6555996 d_1330 G . PASS END=6556736;SVTYPE=DEL;SVLEN=-740;SVINSLEN=1;SVINSSEQ=A TR:VR 38:10 18:0 chr1 145103823 d_190 C . PASS END=145103872;SVTYPE=DEL;SVLEN=-49 TR:VR 43:7 9:0 chr1 90533753 r_28_0 T ]chr13:112962096]C . PASS SVTYPE=BND;MATEID=r_28_1 TR:VR 53:6 43:0 chr13 112962096 r_28_1 C C[chr1:90533753[ . PASS SVTYPE=BND;MATEID=r_28_0 TR:VR 53:6 43:0 chr10 45454522 r_115 G . PASS END=46557651;SVTYPE=DUP;SVLEN=1103129;SVINSLEN=23;SVINSSEQ=AAAGGAGGTCAGGGAACCGGACA TR:VR 99:10 66:0 chr11 78268039 r_166_0 T T[chr8:144480591[ . PASS SVTYPE=BND;MATEID=r_166_1 TR:VR 138:9 37:0 chr8 144480591 r_166_1 A ]chr11:78268039]A . PASS SVTYPE=BND;MATEID=r_166_0 TR:VR 138:9 37:0 chr13 49866932 d_404 A . Too_small_size END=49866977;SVTYPE=DEL;SVLEN=-45 TR:VR 26:8 16:0 chr14 98174994 r_286_0 C ]chr6:142493392]CTCC . PASS SVTYPE=BND;MATEID=r_286_1;SVINSLEN=3;SVINSSEQ=CTC TR:VR 66:11 51:0 chr6 142493392 r_286_1 C CGAG[chr14:98174994[ . PASS SVTYPE=BND;MATEID=r_286_0;SVINSLEN=3;SVINSSEQ=GAG TR:VR 66:11 51:0 chr17 68431787 r_394 C . PASS END=68439948;SVTYPE=DUP;SVLEN=8161 TR:VR 118:6 33:0 chr18 30578793 d_842 T . PASS END=30578844;SVTYPE=DEL;SVLEN=-51 TR:VR 34:11 25:0 chr2 100482331 r_467 C . PASS END=100495011;SVTYPE=DUP;SVLEN=12680 TR:VR 69:7 26:0 chr2 31262238 r_448 A . Too_low_VAF END=32065062;SVTYPE=DUP;SVLEN=802824;SVINSLEN=1;SVINSSEQ=G TR:VR 67:3 39:0 chr20 17785961 d_1059 C . Too_small_size END=17786000;SVTYPE=DEL;SVLEN=-39 TR:VR 38:8 23:0 chr20 31357693 r_516_0 G [chr8:13549962[T . Too_low_VAF SVTYPE=BND;MATEID=r_516_1 TR:VR 68:3 39:0 chr8 13549962 r_516_1 T [chr20:31357693[T . Too_low_VAF SVTYPE=BND;MATEID=r_516_0 TR:VR 68:3 39:0 chr4 104896346 d_1283 C . PASS END=104896412;SVTYPE=DEL;SVLEN=-66 TR:VR 20:5 24:0 chr4 39862495 r_594_0 T T]chr4:39878087] . PASS SVTYPE=BND;MATEID=r_594_1 TR:VR 81:5 23:0 chr4 39878087 r_594_1 T T]chr4:39862495] . PASS SVTYPE=BND;MATEID=r_594_0 TR:VR 81:5 23:0 chr5 171229026 r_660_0 T [chr7:66055099[G . PASS SVTYPE=BND;MATEID=r_660_1 TR:VR 97:13 37:0 chr7 66055099 r_660_1 G [chr5:171229026[G . PASS SVTYPE=BND;MATEID=r_660_0 TR:VR 97:13 37:0 chr5 65911997 r_642_0 C C]chr5:159467665] . PASS SVTYPE=BND;MATEID=r_642_1 TR:VR 75:11 41:0 chr5 159467665 r_642_1 A A]chr5:65911997] . PASS SVTYPE=BND;MATEID=r_642_0 TR:VR 75:11 41:0 chr7 14508584 d_1445 C . Too_small_size END=14508629;SVTYPE=DEL;SVLEN=-45 TR:VR 38:9 17:0 chr7 77114068 r_729 A . PASS END=77143033;SVTYPE=DUP;SVLEN=28965 TR:VR 66:11 27:0 chr9 76956787 r_804 A . PASS END=77333544;SVTYPE=DUP;SVLEN=376757 TR:VR 51:6 31:0 chrX 137290168 d_1754 A . PASS END=137290219;SVTYPE=DEL;SVLEN=-51 TR:VR 29:14 21:0 chr1 212512646 r_74_0 A [chr13:83606501[A . PASS SVTYPE=BND;MATEID=r_74_1 TR:VR 120:15 34:0 chr13 83606501 r_74_1 A [chr1:212512646[A . PASS SVTYPE=BND;MATEID=r_74_0 TR:VR 120:15 34:0 chr1 90548646 r_29_0 T T[chr13:112961824[ . PASS SVTYPE=BND;MATEID=r_29_1 TR:VR 56:9 41:0 chr13 112961824 r_29_1 C ]chr1:90548646]C . PASS SVTYPE=BND;MATEID=r_29_0 TR:VR 56:9 41:0 chr11 17633374 d_315 A . PASS END=17633551;SVTYPE=DEL;SVLEN=-177 TR:VR 29:19 17:0 chr17 37838829 r_365 A . PASS END=38209700;SVTYPE=DUP;SVLEN=370871;SVINSLEN=24;SVINSSEQ=CTCTATCAAGATAAGACACTAAAT TR:VR 36:3 30:0 chr2 172545288 r_491 A . PASS END=172571049;SVTYPE=DUP;SVLEN=25761 TR:VR 68:6 41:0 chr2 31324171 d_915 T . PASS END=31324283;SVTYPE=DEL;SVLEN=-112 TR:VR 43:9 22:0 chr4 105579724 d_1284 A . PASS END=105579774;SVTYPE=DEL;SVLEN=-50 TR:VR 19:10 26:0 chr5 171246341 r_661_0 C C[chr7:66054681[ . PASS SVTYPE=BND;MATEID=r_661_1 TR:VR 89:12 30:0 chr7 66054681 r_661_1 A ]chr5:171246341]A . PASS SVTYPE=BND;MATEID=r_661_0 TR:VR 89:12 30:0 chr5 65912009 r_643_0 T [chr5:159467664[T . PASS SVTYPE=BND;MATEID=r_643_1 TR:VR 75:24 41:0 chr5 159467664 r_643_1 T [chr5:65912009[T . PASS SVTYPE=BND;MATEID=r_643_0 TR:VR 75:24 41:0 chr7 151520338 d_1472 G . PASS END=151520423;SVTYPE=DEL;SVLEN=-85 TR:VR 34:6 23:0 chr7 77877334 r_730 G . PASS END=77897371;SVTYPE=DUP;SVLEN=20037 TR:VR 71:18 31:0 chrX 139807707 r_831 T . PASS END=139816645;SVTYPE=DUP;SVLEN=8938 TR:VR 50:8 32:0 chr11 81400171 r_167 C . PASS END=81401266;SVTYPE=DUP;SVLEN=1095 TR:VR 61:28 22:0 chr12 132474244 d_381 A . PASS END=132474405;SVTYPE=DEL;SVLEN=-161 TR:VR 31:7 24:0 chr17 68479919 r_395_0 G G]chr17:71239355] . Too_low_VAF SVTYPE=BND;MATEID=r_395_1 TR:VR 145:6 49:0 chr17 71239355 r_395_1 C C]chr17:68479919] . Too_low_VAF SVTYPE=BND;MATEID=r_395_0 TR:VR 145:6 49:0 chr18 3747747 r_415_0 T [chr4:146087508[C . PASS SVTYPE=BND;MATEID=r_415_1 TR:VR 87:20 30:0 chr4 146087508 r_415_1 C [chr18:3747747[C . PASS SVTYPE=BND;MATEID=r_415_0 TR:VR 87:20 30:0 chr2 177759765 r_492_0 G ]chr8:80720886]C . PASS SVTYPE=BND;MATEID=r_492_1 TR:VR 137:8 34:0 chr8 80720886 r_492_1 C C[chr2:177759765[ . PASS SVTYPE=BND;MATEID=r_492_0 TR:VR 137:8 34:0 chr20 18585686 i_728 G . PASS END=18585686;SVTYPE=INS;SVINSLEN=93;SVINSSEQ=CAACCTTTTTTTTTTTTTTTTTTTTTGAGAAGGAGTCTCAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGTGTAATCTCGGCTCACCAC TR:VR 72:17 21:0 chr4 106944807 d_1285 A . Too_small_size END=106944847;SVTYPE=DEL;SVLEN=-40 TR:VR 38:6 21:0 chr5 172807003 r_662 A . PASS END=172815017;SVTYPE=DUP;SVLEN=8014 TR:VR 40:3 17:0 chr7 80154424 r_731 T . PASS END=123885044;SVTYPE=DEL;SVLEN=-43730620 TR:VR 83:9 33:0 chr8 136956026 r_785_0 C C]chr9:65420683] . Too_low_VAF SVTYPE=BND;MATEID=r_785_1 TR:VR 151:3 47:0 chr9 65420683 r_785_1 G G]chr8:136956026] . Too_low_VAF SVTYPE=BND;MATEID=r_785_0 TR:VR 151:3 47:0 chr1 213243071 r_76_0 C C]chr13:83606609] . Too_low_VAF SVTYPE=BND;MATEID=r_76_1 TR:VR 120:5 33:0 chr13 83606609 r_76_1 T T]chr1:213243071] . Too_low_VAF SVTYPE=BND;MATEID=r_76_0 TR:VR 120:5 33:0 chr1 93619749 r_31_0 T T[chr5:81356805[ . PASS SVTYPE=BND;MATEID=r_31_1 TR:VR 57:4 47:0 chr5 81356805 r_31_1 T ]chr1:93619749]T . PASS SVTYPE=BND;MATEID=r_31_0 TR:VR 57:4 47:0 chr11 22859197 r_142 T . PASS END=22884964;SVTYPE=DUP;SVLEN=25767;SVINSLEN=12;SVINSSEQ=TTATAAATTATA TR:VR 47:3 37:0 chr12 81658609 r_213 A . PASS END=81738672;SVTYPE=DUP;SVLEN=80063 TR:VR 116:11 35:0 chr13 54266320 d_407 A . PASS END=54266548;SVTYPE=DEL;SVLEN=-228 TR:VR 31:4 24:0 chr14 34569922 r_262_0 G G]chr3:38982360] . PASS SVTYPE=BND;MATEID=r_262_1 TR:VR 75:6 47:0 chr3 38982360 r_262_1 T T]chr14:34569922] . PASS SVTYPE=BND;MATEID=r_262_0 TR:VR 75:6 47:0 chr14 98653092 r_288 A . PASS END=98660332;SVTYPE=DUP;SVLEN=7240;SVINSLEN=16;SVINSSEQ=GAGTTATCATGAGATC TR:VR 36:5 33:0 chr16 10408127 r_325 A . PASS END=10428087;SVTYPE=DUP;SVLEN=19960;SVINSLEN=30;SVINSSEQ=TTTCTTTCTTTCTTTCTTTCTTTCTTTCTT TR:VR 77:5 31:0 chr17 38448535 r_366_0 T T]chr17:40405512] . PASS SVTYPE=BND;MATEID=r_366_1 TR:VR 55:23 41:0 chr17 40405512 r_366_1 T T]chr17:38448535] . PASS SVTYPE=BND;MATEID=r_366_0 TR:VR 55:23 41:0 chr17 68483285 r_396 A . PASS END=69508769;SVTYPE=DUP;SVLEN=1025484 TR:VR 145:9 45:0 chr2 101935885 r_468_0 G [chr4:111778384[T . PASS SVTYPE=BND;MATEID=r_468_1 TR:VR 95:8 25:0 chr4 111778384 r_468_1 T [chr2:101935885[T . PASS SVTYPE=BND;MATEID=r_468_0 TR:VR 95:8 25:0 chr2 177759945 r_493_0 C C[chr7:16178550[ . PASS SVTYPE=BND;MATEID=r_493_1 TR:VR 68:8 29:0 chr7 16178550 r_493_1 A ]chr2:177759945]A . PASS SVTYPE=BND;MATEID=r_493_0 TR:VR 68:8 29:0 chr4 11140056 d_1236 T . Too_small_size END=11140091;SVTYPE=DEL;SVLEN=-35 TR:VR 36:15 26:0 chr4 186424905 r_622_0 A [chr4:186446818[T . PASS SVTYPE=BND;MATEID=r_622_1 TR:VR 78:6 27:0 chr4 186446818 r_622_1 T [chr4:186424905[T . PASS SVTYPE=BND;MATEID=r_622_0 TR:VR 78:6 27:0 chr4 93651580 d_1280 A . Too_small_size END=93651622;SVTYPE=DEL;SVLEN=-42 TR:VR 35:9 23:0 chr5 176033350 r_663_0 T ]chr7:152416673]G . Too_low_VAF SVTYPE=BND;MATEID=r_663_1 TR:VR 177:4 135:0 chr7 152416673 r_663_1 G G[chr5:176033350[ . Too_low_VAF SVTYPE=BND;MATEID=r_663_0 TR:VR 177:4 135:0 chr5 70145504 r_644_0 A [chr8:102581658[G . PASS SVTYPE=BND;MATEID=r_644_1 TR:VR 135:7 32:0 chr8 102581658 r_644_1 G [chr5:70145504[G . PASS SVTYPE=BND;MATEID=r_644_0 TR:VR 135:7 32:0 chr6 160441630 r_718 G . PASS END=160447381;SVTYPE=DUP;SVLEN=5751 TR:VR 59:10 14:0 chr6 37103460 r_689 A . PASS END=37326648;SVTYPE=DUP;SVLEN=223188;SVINSLEN=4;SVINSSEQ=GAGC TR:VR 71:4 43:0 chr7 82363735 r_732 T . PASS END=82384910;SVTYPE=DUP;SVLEN=21175 TR:VR 47:10 25:0 chr9 109228913 r_810 A . PASS END=109239162;SVTYPE=DUP;SVLEN=10249 TR:VR 44:3 16:0 chr9 85462326 r_806 C . PASS END=86385789;SVTYPE=DUP;SVLEN=923463;SVINSLEN=8;SVINSSEQ=TGCTCAAA TR:VR 64:7 43:0 chr1 213791563 d_210 T . Too_small_size END=213791608;SVTYPE=DEL;SVLEN=-45 TR:VR 87:7 19:0 chr1 95631330 i_21 A . PASS END=95631330;SVTYPE=INS;SVINSLEN=544;SVINSSEQ=TTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTCTTAATGATTGCCATTCTAACCGGTGTGAGATGATATCTCATAGTGGTTTATT TR:VR 25:5 22:0 chr10 55471486 i_134 T . PASS END=55471486;SVTYPE=INS;SVINSLEN=66;SVINSSEQ=TTTCATTATATTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATTTTGAATTCT TR:VR 34:10 15:0 chr12 85750560 r_214_0 T T[chr7:103623359[ . PASS SVTYPE=BND;MATEID=r_214_1 TR:VR 58:7 30:0 chr7 103623359 r_214_1 A ]chr12:85750560]A . PASS SVTYPE=BND;MATEID=r_214_0 TR:VR 58:7 30:0 chr13 55349574 d_408 A . PASS END=55349631;SVTYPE=DEL;SVLEN=-57 TR:VR 32:9 17:0 chr14 34786597 d_439 T . PASS END=34786880;SVTYPE=DEL;SVLEN=-283;SVINSLEN=3;SVINSSEQ=AAA TR:VR 38:3 23:0 chr14_KI270723v1_random 19961 r_298_0 C CCTCCGGTAAAGCTGAACACTATCTGTTCCTGAGGTATCAGGT]chr14_KI270724v1_random:16865] . PASS SVTYPE=BND;MATEID=r_298_1;SVINSLEN=42;SVINSSEQ=CTCCGGTAAAGCTGAACACTATCTGTTCCTGAGGTATCAGGT TR:VR 53:5 37:0 chr14_KI270724v1_random 16865 r_298_1 G GACCTGATACCTCAGGAACAGATAGTGTTCAGCTTTACCGGAG]chr14_KI270723v1_random:19961] . PASS SVTYPE=BND;MATEID=r_298_0;SVINSLEN=42;SVINSSEQ=ACCTGATACCTCAGGAACAGATAGTGTTCAGCTTTACCGGAG TR:VR 53:5 37:0 chr16 89941218 d_741 T . PASS END=89941442;SVTYPE=DEL;SVLEN=-224 TR:VR 43:12 12:0 chr17 38860605 r_367_0 A ]chr8:91016722]T . PASS SVTYPE=BND;MATEID=r_367_1 TR:VR 127:14 53:0 chr8 91016722 r_367_1 T T[chr17:38860605[ . PASS SVTYPE=BND;MATEID=r_367_0 TR:VR 127:14 53:0 chr17 68487644 r_397_0 C C]chr17:73004336] . PASS SVTYPE=BND;MATEID=r_397_1 TR:VR 125:9 36:0 chr17 73004336 r_397_1 C C]chr17:68487644] . PASS SVTYPE=BND;MATEID=r_397_0 TR:VR 125:9 36:0 chr18 45279832 d_844 G . PASS END=45281546;SVTYPE=DEL;SVLEN=-1714 TR:VR 38:5 19:0 chr2 103171189 r_469 G . PASS END=103209506;SVTYPE=DUP;SVLEN=38317;SVINSLEN=18;SVINSSEQ=TGCTACATTTTAGGAGAC TR:VR 98:7 37:0 chr4 113078049 r_605 T . PASS END=113083420;SVTYPE=DUP;SVLEN=5371 TR:VR 35:9 36:0 chr4 97919203 r_602 T . PASS END=97921104;SVTYPE=DUP;SVLEN=1901 TR:VR 44:4 22:0 chr5 70160467 r_645_0 A A]chr8:102581926] . Too_low_VAF SVTYPE=BND;MATEID=r_645_1 TR:VR 147:3 40:0 chr8 102581926 r_645_1 A A]chr5:70160467] . Too_low_VAF SVTYPE=BND;MATEID=r_645_0 TR:VR 147:3 40:0 chr7 82948940 r_733 A . PASS END=82969791;SVTYPE=DUP;SVLEN=20851 TR:VR 48:9 19:0 chr9 114636785 d_1593 G . PASS END=114636869;SVTYPE=DEL;SVLEN=-84 TR:VR 29:4 21:0 chrX 142650756 d_1755 G . PASS END=142651217;SVTYPE=DEL;SVLEN=-461 TR:VR 34:11 21:0 chr1 150879896 d_192 C . Too_small_size END=150879931;SVTYPE=DEL;SVLEN=-35 TR:VR 45:6 19:0 chr1 214542074 r_77 C . Too_low_VAF END=214591176;SVTYPE=DUP;SVLEN=49102 TR:VR 160:4 36:0 chr1 96440217 r_32 C . PASS END=97074574;SVTYPE=DUP;SVLEN=634357 TR:VR 78:18 28:0 chr12 89140574 r_215_0 A [chr3:139781377[A . PASS SVTYPE=BND;MATEID=r_215_1 TR:VR 94:21 40:0 chr3 139781377 r_215_1 A [chr12:89140574[A . PASS SVTYPE=BND;MATEID=r_215_0 TR:VR 94:21 40:0 chr13 55422289 r_244 C . PASS END=55424147;SVTYPE=DUP;SVLEN=1858 TR:VR 44:6 23:0 chr15 100069966 r_315_0 A A]chr17:69951905] . PASS SVTYPE=BND;MATEID=r_315_1 TR:VR 108:8 33:0 chr17 69951905 r_315_1 T T]chr15:100069966] . PASS SVTYPE=BND;MATEID=r_315_0 TR:VR 108:8 33:0 chr16 11345740 r_326 C . PASS END=11358598;SVTYPE=DUP;SVLEN=12858 TR:VR 68:10 22:0 chr17 39598811 r_368 C . PASS END=39616615;SVTYPE=DUP;SVLEN=17804 TR:VR 69:4 25:0 chr17 69465345 d_797 A . PASS END=69465413;SVTYPE=DEL;SVLEN=-68 TR:VR 49:15 17:0 chr2 103305248 r_470_0 G GTGTAAAGCTC]chr4:111778368] . PASS SVTYPE=BND;MATEID=r_470_1;SVINSLEN=10;SVINSSEQ=TGTAAAGCTC TR:VR 87:10 36:0 chr4 111778368 r_470_1 T TGAGCTTTACA]chr2:103305248] . PASS SVTYPE=BND;MATEID=r_470_0;SVINSLEN=10;SVINSSEQ=GAGCTTTACA TR:VR 87:10 36:0 chr20 1913937 i_724 A . PASS END=1913937;SVTYPE=INS;SVINSLEN=152;SVINSSEQ=TGGCAAGGTGGGCGGATCACAAGGTCAGGAGATCGAGACAATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAAAATACACACACACAAAAAATACACCACGCCAGGTGTGGTGGTGGGCGCCTGTAATCCCAGCTACT TR:VR 42:3 30:0 chr20 33687648 r_517 G . PASS END=33724620;SVTYPE=DUP;SVLEN=36972 TR:VR 110:21 31:0 chr4 115600796 d_1286 C . PASS END=115600849;SVTYPE=DEL;SVLEN=-53 TR:VR 26:18 25:0 chr4 98119733 r_603 C . PASS END=98383361;SVTYPE=DEL;SVLEN=-263628 TR:VR 57:9 44:0 chr5 177537617 r_664 C . PASS END=177551485;SVTYPE=DUP;SVLEN=13868 TR:VR 55:17 25:0 chr5 73592129 i_1026 C . PASS END=73592173;SVTYPE=INS;SVINSLEN=86;SVINSSEQ=CAGGAGGGTACCTATCCTTCTCCTCTTTACCTCTATGAAATAAACTTTTTTGGCTTGACATATGAGTGAGAACATGCAATATGTTT TR:VR 47:3 20:0 chr6 163140262 d_1420 A . Too_small_size END=163140305;SVTYPE=DEL;SVLEN=-43 TR:VR 42:10 19:0 chr8 138743185 d_1556 G . Too_low_VAF;Too_small_size END=138743169;SVTYPE=INS;SVINSLEN=47;SVINSSEQ=ATGATGGTGATGGTGTAGTTGATGAGGGTGATGGTGGTAGTGATTGT TR:VR 91:3 19:0 chr9 118096755 d_1594 G . PASS END=118096829;SVTYPE=DEL;SVLEN=-74 TR:VR 34:22 26:0 chr9 86765574 r_807 T . PASS END=86772061;SVTYPE=DUP;SVLEN=6487 TR:VR 37:4 23:0 chrX 9080718 d_1732 T . PASS END=9081087;SVTYPE=DEL;SVLEN=-369 TR:VR 20:3 29:0 chr1 215719637 r_78_0 A ]chr7:103628142]A . PASS SVTYPE=BND;MATEID=r_78_1 TR:VR 96:7 39:0 chr7 103628142 r_78_1 A A[chr1:215719637[ . PASS SVTYPE=BND;MATEID=r_78_0 TR:VR 96:7 39:0 chr10 102236071 r_131 A . PASS END=102242917;SVTYPE=DUP;SVLEN=6846 TR:VR 43:7 30:0 chr12 89140759 r_216_0 A A]chr3:139786487] . PASS SVTYPE=BND;MATEID=r_216_1 TR:VR 98:21 44:0 chr3 139786487 r_216_1 T T]chr12:89140759] . PASS SVTYPE=BND;MATEID=r_216_0 TR:VR 98:21 44:0 chr13 56871859 d_409 G . PASS END=56872024;SVTYPE=DEL;SVLEN=-165 TR:VR 26:7 14:0 chr15 100101858 r_316 T . PASS END=100107049;SVTYPE=DUP;SVLEN=5191 TR:VR 49:3 20:0 chr16 1186002 i_384 T . PASS END=1186002;SVTYPE=INS;SVINSLEN=1055;SVINSSEQ=AGACGGCGTGCGTAGGGGCCGGAGGGCGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGTCGGCGGCGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCAGGTGAGTAGACGGCGTGCGTCGGGGCCGGAGGCGGGGTACGTGGGGGGCGGGTGAGTAGACGGCATGTGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCAGGTGGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGCGGGGTACGTGGGGGGCGGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGGCGGGGGGTGTGTACGGGGCGGGTGAGTAGACGGTCAGCGTGCGTAGGGGCCGGAGGCGGGGTACGGGGGCGGGTGAGTAGACGGTCGGCGTGCATAGGGGCCGGAGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGTCAGCGTGCGTAGGGGCCGGAGGCGGGGTACGTGGGGGGCGGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGCGTGGTGTGTACGGGGCGGGTGAGTAGGACGGTCGGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGCGGGGTACGTGGGGGGGCGGGTGAGTAGACGGCGTGCGTAGGGGCCGGAGGCGGGGGTGTACGGGGGCGGGTGAGTAGACGGTCGGCGTGCATAGGGGCCGAAGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGCGTAGGGGCCAGAGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCAGGTGAGTAGACGGCGTGCATAGGGGCCGGAGGCGGGGGTGTGTATGGGGCGGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGGGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGCGTAGGGGCCGGAGGCGGGGGTGTGTGTACGGGGCAGGCGGGGTGTGTACGGGGCAGGGA TR:VR 47:3 23:0 chr17 69488499 r_398 A . PASS END=72817186;SVTYPE=DUP;SVLEN=3328687 TR:VR 112:8 36:0 chr18 4859002 r_416_0 G G]chr18:51457000] . PASS SVTYPE=BND;MATEID=r_416_1 TR:VR 67:7 37:0 chr18 51457000 r_416_1 C C]chr18:4859002] . PASS SVTYPE=BND;MATEID=r_416_0 TR:VR 67:7 37:0 chr20 3504770 d_1052 T . Too_small_size END=3504814;SVTYPE=DEL;SVLEN=-44 TR:VR 47:25 17:0 chr4 120337375 d_1287 T . PASS END=120337434;SVTYPE=DEL;SVLEN=-59 TR:VR 23:9 24:0 chr4 99756306 r_604 T . PASS END=99768880;SVTYPE=DUP;SVLEN=12574 TR:VR 52:3 22:0 chr6 163329337 i_1105 C . PASS END=163329337;SVTYPE=INS;SVINSLEN=89;SVINSSEQ=CCTCCCCCACTCCCCAGCCAGTCATCCCTCCTCCCAACTCCCCTGCAGCCCAGAATCCCTCCCCAACTCCCCCATGCAGCCAGAATCCC TR:VR 39:3 27:0 chr6 43623510 r_691 C . PASS END=43645059;SVTYPE=DUP;SVLEN=21549 TR:VR 53:4 20:0 chr7 83649024 d_1463 A . Too_small_size END=83649062;SVTYPE=DEL;SVLEN=-38 TR:VR 23:8 28:0 chr8 47416864 d_1507 G . PASS END=47418064;SVTYPE=DEL;SVLEN=-1200 TR:VR 103:52 20:0 chr9 120100594 r_811 A . PASS END=120151634;SVTYPE=DUP;SVLEN=51040 TR:VR 94:5 45:0 chr9 91093697 d_1589 C . Too_small_size END=91093735;SVTYPE=DEL;SVLEN=-38 TR:VR 25:14 19:0 chr1 215719831 r_79_0 G G[chr12:85750374[ . PASS SVTYPE=BND;MATEID=r_79_1 TR:VR 118:7 42:0 chr12 85750374 r_79_1 A ]chr1:215719831]A . PASS SVTYPE=BND;MATEID=r_79_0 TR:VR 118:7 42:0 chr10 102632162 r_132 G . PASS END=102655522;SVTYPE=DUP;SVLEN=23360;SVINSLEN=1;SVINSSEQ=A TR:VR 59:4 29:0 chr10 60490277 r_116_0 T ]chr13:106900091]T . PASS SVTYPE=BND;MATEID=r_116_1 TR:VR 54:6 33:0 chr13 106900091 r_116_1 T T[chr10:60490277[ . PASS SVTYPE=BND;MATEID=r_116_0 TR:VR 54:6 33:0 chr11 83133353 r_170_0 C CTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCGCCGCCCCGTCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGTGACCCCATCTGGGAGGTGAGGAGCGTCTCTGCCCG]chr3:33716085] . PASS SVTYPE=BND;MATEID=r_170_1;SVINSLEN=191;SVINSSEQ=TGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCGCCGCCCCGTCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGTGACCCCATCTGGGAGGTGAGGAGCGTCTCTGCCCG TR:VR 101:34 42:0 chr3 33716085 r_170_1 T TCGGGCAGAGACGCTCCTCACCTCCCAGATGGGGTCACGGCCGGGCAGAGGCGCTCCTCACATCCCAGACGGGGCGGCGGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGTGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCAGACTGGGCA]chr11:83133353] . PASS SVTYPE=BND;MATEID=r_170_0;SVINSLEN=191;SVINSSEQ=CGGGCAGAGACGCTCCTCACCTCCCAGATGGGGTCACGGCCGGGCAGAGGCGCTCCTCACATCCCAGACGGGGCGGCGGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGTGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCAGACTGGGCA TR:VR 101:34 42:0 chr12 89140766 r_217 A . PASS END=89141553;SVTYPE=DUP;SVLEN=787 TR:VR 76:8 25:0 chr13 59997286 r_245 A . PASS END=60006033;SVTYPE=DUP;SVLEN=8747 TR:VR 39:6 25:0 chr15 100390939 r_317_0 T ]chr4:180957136]AAAAGACAAAATTGACAAATGGGAC . PASS SVTYPE=BND;MATEID=r_317_1;SVINSLEN=24;SVINSSEQ=AAAAGACAAAATTGACAAATGGGA TR:VR 68:8 48:1 chr4 180957136 r_317_1 C CTCCCATTTGTCAATTTTGTCTTTT[chr15:100390939[ . PASS SVTYPE=BND;MATEID=r_317_0;SVINSLEN=24;SVINSSEQ=TCCCATTTGTCAATTTTGTCTTTT TR:VR 68:8 48:1 chr16 1248677 r_320 G . PASS END=1364222;SVTYPE=DUP;SVLEN=115545 TR:VR 92:6 43:0 chr16 90198375 d_743 T . PASS END=90199539;SVTYPE=DEL;SVLEN=-1164;SVINSLEN=77;SVINSSEQ=CTGTGATATTGGGAGTGTATAGTTGTCATTGTGACAAACCCTTTGCTGTCTCATCATCTCATCATTATTTGTTTACA TR:VR 35:3 36:0 chr17 69669729 r_399_0 G [chr17:73005277[C . Too_low_VAF SVTYPE=BND;MATEID=r_399_1 TR:VR 138:3 39:0 chr17 73005277 r_399_1 C [chr17:69669729[C . Too_low_VAF SVTYPE=BND;MATEID=r_399_0 TR:VR 138:3 39:0 chr18 4932984 d_834 C . Too_small_size END=4933021;SVTYPE=DEL;SVLEN=-37 TR:VR 36:10 9:0 chr2 106844256 r_471_0 A ]chr8:13550124]C . PASS SVTYPE=BND;MATEID=r_471_1 TR:VR 80:4 35:0 chr8 13550124 r_471_1 C C[chr2:106844256[ . PASS SVTYPE=BND;MATEID=r_471_0 TR:VR 80:4 35:0 chr2 181231807 d_1034 G . PASS END=181231899;SVTYPE=DEL;SVLEN=-92 TR:VR 37:17 15:0 chr20 3703709 d_1053 A . PASS END=3703771;SVTYPE=DEL;SVLEN=-62 TR:VR 43:25 16:0 chr3 10940 d_1181 C . Too_low_VAF END=11123;SVTYPE=INS;SVINSLEN=278;SVINSSEQ=TAACCCAACCTCAACCCTGGCCCAACCTGACCCAACCCTGGCGGGCTGCCTAACCTCAACCCTGGCCTGGCCTAACCCAACCCTGGCCTGGCCTGGCCTGAGCCCCTAACCCTAACCCTGGCCTGGCCTGGCCCCTGGCCCTGGCCCTGGCACCGGCCTGGCCCTGGCCCTGGCCTGGCCTGCCCCGCCCGGCCTAGGCCTGGCCTGGCCTGGCCGGCGCCGGCCTGGCCTGAGCCTGGCCTGGCTGGCGCTGGCGCTGGCCCTGGCTGGCCTGGCCT TR:VR 325:3 245:0 chr4 18811582 d_1240 G . PASS END=18811650;SVTYPE=DEL;SVLEN=-68 TR:VR 33:6 20:0 chr5 74725030 r_646 T . PASS END=74740571;SVTYPE=DUP;SVLEN=15541 TR:VR 59:4 34:0 chr6 16336327 r_676_0 A ]chr8:97113854]C . PASS SVTYPE=BND;MATEID=r_676_1 TR:VR 188:12 29:0 chr8 97113854 r_676_1 C C[chr6:16336327[ . PASS SVTYPE=BND;MATEID=r_676_0 TR:VR 188:12 29:0 chr6 44074550 r_692 G . PASS END=44075732;SVTYPE=DUP;SVLEN=1182 TR:VR 28:3 28:0 chr7 156685751 d_1476 T . Too_small_size END=156685797;SVTYPE=DEL;SVLEN=-46 TR:VR 20:18 19:0 chr7 86330992 d_1464 A . Too_small_size END=86331036;SVTYPE=DEL;SVLEN=-44 TR:VR 22:4 19:0 chr8 139406515 r_786 A . PASS END=139408114;SVTYPE=DUP;SVLEN=1599 TR:VR 106:7 15:0 chr8 47476889 r_747 A . Too_low_VAF END=47577473;SVTYPE=DUP;SVLEN=100584 TR:VR 155:6 37:0 chr9 121250625 r_812 C . PASS END=121306105;SVTYPE=DUP;SVLEN=55480 TR:VR 97:25 50:0 chr9 92503734 r_808 T . PASS END=92522014;SVTYPE=DUP;SVLEN=18280 TR:VR 45:3 23:0 chrX 98357749 i_1403 C . PASS END=98357781;SVTYPE=INS;SVINSLEN=61;SVINSSEQ=AAAGGAAAGACAGTTTTTAAATAGAGAAAACTAGAATTATTTGATGGAGTACTACTGCTAC TR:VR 34:20 19:0 chr1 153289255 d_193 G . Too_small_size END=153289295;SVTYPE=DEL;SVLEN=-40 TR:VR 35:5 20:0 chr1 215934795 r_80 A . Too_low_VAF END=215942887;SVTYPE=DUP;SVLEN=8092 TR:VR 99:3 13:0 chr11 84624024 r_171 G . PASS END=84641489;SVTYPE=DUP;SVLEN=17465 TR:VR 70:10 24:0 chr12 9018422 r_188 A . PASS END=9035181;SVTYPE=DUP;SVLEN=16759;SVINSLEN=4;SVINSSEQ=TAAG TR:VR 67:10 28:0 chr15 100390956 r_318_0 A AT[chr4:180955682[ . PASS SVTYPE=BND;MATEID=r_318_1;SVINSLEN=1;SVINSSEQ=T TR:VR 68:5 47:0 chr4 180955682 r_318_1 T ]chr15:100390956]AT . PASS SVTYPE=BND;MATEID=r_318_0;SVINSLEN=1;SVINSSEQ=A TR:VR 68:5 47:0 chr16 9483323 r_324 G . PASS END=9511905;SVTYPE=DUP;SVLEN=28582 TR:VR 64:10 34:0 chr17 4183825 r_348 C . PASS END=4186894;SVTYPE=DUP;SVLEN=3069 TR:VR 44:5 20:0 chr17 69672185 r_400 A . Too_low_VAF END=73160601;SVTYPE=DEL;SVLEN=-3488416 TR:VR 121:3 46:0 chr18 5128145 r_417_0 A A]chr6:32530478] . Too_low_VAF SVTYPE=BND;MATEID=r_417_1 TR:VR 109:3 69:0 chr6 32530478 r_417_1 T T]chr18:5128145] . Too_low_VAF SVTYPE=BND;MATEID=r_417_0 TR:VR 109:3 69:0 chr19 37022042 i_583 A . PASS END=37022042;SVTYPE=INS;SVINSLEN=73;SVINSSEQ=TTATTACTAATTTTCTTATGTGTGATTATATGACACTTTGAGTAAACAGGAAATTGTTTTTGGGGAGAAAATT TR:VR 38:16 16:0 chr2 106844480 r_472_0 A A]chr20:31391332] . Too_low_VAF SVTYPE=BND;MATEID=r_472_1 TR:VR 102:4 31:0 chr20 31391332 r_472_1 C C]chr2:106844480] . Too_low_VAF SVTYPE=BND;MATEID=r_472_0 TR:VR 102:4 31:0 chr2 183415324 r_494 A . PASS END=183420684;SVTYPE=DUP;SVLEN=5360 TR:VR 51:4 26:0 chr3 20003014 d_1189 C . PASS END=20003456;SVTYPE=DEL;SVLEN=-442 TR:VR 35:3 15:0 chr5 74877333 r_647_0 A A]chr5:74894720] . PASS SVTYPE=BND;MATEID=r_647_1 TR:VR 59:4 38:0 chr5 74894720 r_647_1 G G]chr5:74877333] . PASS SVTYPE=BND;MATEID=r_647_0 TR:VR 59:4 38:0 chr6 16336647 r_677_0 A A[chr8:97052676[ . PASS SVTYPE=BND;MATEID=r_677_1 TR:VR 164:12 45:0 chr8 97052676 r_677_1 C ]chr6:16336647]C . PASS SVTYPE=BND;MATEID=r_677_0 TR:VR 164:12 45:0 chr7 87249957 d_1465 G . PASS END=87250089;SVTYPE=DEL;SVLEN=-132 TR:VR 25:8 19:0 chr9 92894172 r_809 G . PASS END=92915351;SVTYPE=DUP;SVLEN=21179 TR:VR 49:3 37:0 chr1 215995159 r_81 A . PASS END=216005589;SVTYPE=DUP;SVLEN=10430 TR:VR 111:21 31:0 chr10 110667743 d_299 C . PASS END=110668019;SVTYPE=DEL;SVLEN=-276 TR:VR 34:6 21:0 chr11 86049750 r_172 A . PASS END=86470516;SVTYPE=DUP;SVLEN=420766 TR:VR 86:15 38:0 chr12 93588647 r_218 C . PASS END=93755693;SVTYPE=DUP;SVLEN=167046 TR:VR 87:8 33:0 chr13 61359466 r_246_0 A [chr15:77449907[C . PASS SVTYPE=BND;MATEID=r_246_1 TR:VR 73:4 38:0 chr15 77449907 r_246_1 C [chr13:61359466[C . PASS SVTYPE=BND;MATEID=r_246_0 TR:VR 73:4 38:0 chr17 10325975 r_354 C . PASS END=10347757;SVTYPE=DUP;SVLEN=21782;SVINSLEN=2;SVINSSEQ=AA TR:VR 67:11 31:0 chr17 72523121 r_401_0 C [chr17:72995356[C . PASS SVTYPE=BND;MATEID=r_401_1 TR:VR 118:9 33:0 chr17 72995356 r_401_1 C [chr17:72523121[C . PASS SVTYPE=BND;MATEID=r_401_0 TR:VR 118:9 33:0 chr18 53165342 i_527 C . Too_small_size END=53165342;SVTYPE=INS;SVINSLEN=48;SVINSSEQ=TGACATGGAGGATTCCTTTTAGAATTCATGGTATATTACATTTTTGAT TR:VR 21:6 18:0 chr20 43740309 d_1097 T . PASS END=43740513;SVTYPE=DEL;SVLEN=-204 TR:VR 34:10 17:0 chr22 12500291 i_818 A . PASS END=12500291;SVTYPE=INS;SVINSLEN=344;SVINSSEQ=CTCTTTTTATACCATCGGCAAATGGACATTTGGGGCGCTTTTGGGCCTATGTTAGAAAAGGAAATATCTTCACATGCAATCTAGACGGAAGCATTCTGAGAAATTTCTTTATGATGTGTGCGTTCATCTCACAAAGCTGAACATTTATTTTGATTGAGCACTTTGGAAACACTCTTTTTGTAGAATCCACAAGTGGACAATTTGGAGTGCTTTGCAGCCTTTGGTAGAAATTGAAATATCTTCAACTAAAATCTACACAAAAGCAATCTGAGAAGCTTCTTTGTGATATGTGCATTCACCTCAAAGAGATAAACCTTTCTTTTGATTGAGCAGTTTTGAAACTC TR:VR 99:7 56:0 chr5 100396246 r_650 T . PASS END=100404050;SVTYPE=DUP;SVLEN=7804 TR:VR 17:3 24:0 chr5 77629408 d_1350 A . PASS END=77629470;SVTYPE=DEL;SVLEN=-62 TR:VR 27:10 8:0 chr6 163885332 r_719_0 T [chr7:67592304[TCAA . PASS SVTYPE=BND;MATEID=r_719_1;SVINSLEN=3;SVINSSEQ=TCA TR:VR 91:7 45:0 chr7 67592304 r_719_1 A [chr6:163885332[TGAA . PASS SVTYPE=BND;MATEID=r_719_0;SVINSLEN=3;SVINSSEQ=TGA TR:VR 91:7 45:0 chr6 49883359 r_693 G . PASS END=49893165;SVTYPE=DUP;SVLEN=9806 TR:VR 63:6 28:0 chr9 124139588 d_1595 G . PASS END=124139665;SVTYPE=DEL;SVLEN=-77 TR:VR 37:18 20:0 chr9 94029364 d_1590 C . PASS END=94029582;SVTYPE=DEL;SVLEN=-218 TR:VR 36:4 21:0 chr1 216489080 i_52 T . PASS END=216489098;SVTYPE=INS;SVINSLEN=215;SVINSSEQ=ATCCACTTGCAGACTTTACAAACAGAGTGTTTCCTAACTGCTCTATGAAAAGAAAAGTTAAACTCTGTGAGTTGAACGCACACATCACAAAGGAGTTTCTGAGAATCATTCTGTCTAGTTTTTATACGAAGATATTTCCTTTTCTACCATTGACCTCAAAGCGGCTGAAATCTCCACTTGCAAATTCCACAAAAAGAGTGTTTCAAGTCTGCTCT TR:VR 73:8 20:0 chr11 86208047 d_339 T . Too_small_size END=86208088;SVTYPE=DEL;SVLEN=-41 TR:VR 60:5 23:0 chr13 61359734 r_247_0 T T]chr15:77464787] . PASS SVTYPE=BND;MATEID=r_247_1 TR:VR 60:4 39:0 chr15 77464787 r_247_1 C C]chr13:61359734] . PASS SVTYPE=BND;MATEID=r_247_0 TR:VR 60:4 39:0 chr16 13994241 r_327 C . PASS END=14061815;SVTYPE=DUP;SVLEN=67574 TR:VR 91:13 38:0 chr17 72656689 r_402_0 G [chr17:73172102[TAAT . Too_low_VAF SVTYPE=BND;MATEID=r_402_1;SVINSLEN=3;SVINSSEQ=TAA TR:VR 103:5 40:0 chr17 73172102 r_402_1 T [chr17:72656689[TTAT . Too_low_VAF SVTYPE=BND;MATEID=r_402_0;SVINSLEN=3;SVINSSEQ=TTA TR:VR 103:5 40:0 chr18 54149603 d_845 G . Too_small_size END=54149641;SVTYPE=DEL;SVLEN=-38 TR:VR 24:15 13:0 chr19 3720743 r_424 C . PASS END=3729474;SVTYPE=DUP;SVLEN=8731;SVINSLEN=2;SVINSSEQ=CA TR:VR 34:3 27:0 chr2 185900253 d_1035 T . Too_small_size END=185900297;SVTYPE=DEL;SVLEN=-44 TR:VR 35:5 22:0 chr20 44116822 r_518 C . PASS END=56741856;SVTYPE=DUP;SVLEN=12625034 TR:VR 72:7 38:0 chr3 2500851 r_544 G . PASS END=2841753;SVTYPE=DEL;SVLEN=-340902 TR:VR 69:5 34:0 chr6 163885786 r_720_0 A A]chr7:67612943] . PASS SVTYPE=BND;MATEID=r_720_1 TR:VR 97:7 37:0 chr7 67612943 r_720_1 T T]chr6:163885786] . PASS SVTYPE=BND;MATEID=r_720_0 TR:VR 97:7 37:0 chr6 51190418 d_1391 T . PASS END=51190537;SVTYPE=DEL;SVLEN=-119 TR:VR 36:11 13:0 chr8 140769543 r_788_0 A [chr8:140771671[A . PASS SVTYPE=BND;MATEID=r_788_1 TR:VR 123:10 22:0 chr8 140771671 r_788_1 A [chr8:140769543[A . PASS SVTYPE=BND;MATEID=r_788_0 TR:VR 123:10 22:0 chr8 51227487 d_1508 G . Too_small_size END=51227533;SVTYPE=DEL;SVLEN=-46 TR:VR 72:7 23:0 chr9 129442927 r_814_0 C C[chrX:72733184[ . PASS SVTYPE=BND;MATEID=r_814_1 TR:VR 85:7 44:0 chrX 72733184 r_814_1 G ]chr9:129442927]G . PASS SVTYPE=BND;MATEID=r_814_0 TR:VR 85:7 44:0 chr9 95235794 i_1290 A . PASS END=95235823;SVTYPE=INS;SVINSLEN=96;SVINSSEQ=CAAGAGTGAAACTCCACCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAACAAGGGGCACATGGGGGGCAGGGACATCCAGGAGCAGTA TR:VR 30:17 19:0 chr1 156409503 r_53 T . Too_low_VAF END=221105101;SVTYPE=DUP;SVLEN=64695598 TR:VR 118:4 33:0 chr1 217893917 d_211 C . PASS END=217893995;SVTYPE=DEL;SVLEN=-78;SVINSLEN=1;SVINSSEQ=A TR:VR 75:6 19:0 chr10 68647210 d_290 A . PASS END=68647258;SVTYPE=DEL;SVLEN=-48 TR:VR 30:9 23:0 chr11 86932721 r_173_0 C C]chr2:14902886] . PASS SVTYPE=BND;MATEID=r_173_1 TR:VR 88:11 37:0 chr2 14902886 r_173_1 G G]chr11:86932721] . PASS SVTYPE=BND;MATEID=r_173_0 TR:VR 88:11 37:0 chr12 13658626 d_353 A . PASS END=13658679;SVTYPE=DEL;SVLEN=-53 TR:VR 40:17 26:0 chr12 95441859 r_219 T . PASS END=95461352;SVTYPE=DUP;SVLEN=19493 TR:VR 74:5 33:0 chr17 73005926 i_452 G . Too_small_size END=73005929;SVTYPE=INS;SVINSLEN=45;SVINSSEQ=AGTGACAGAGTGAGACTCTGCTTCTAAAAAAAAAAAAAAAAAAAA TR:VR 72:5 18:0 chr17_GL000205v2_random 7312 i_479 A . Too_low_VAF END=7313;SVTYPE=INS;SVINSLEN=98;SVINSSEQ=CAAACATTCGGACCCCAGATGTAGTGTTTTCGAATACTATGTGTAGGACAAACATTCAAACAACGGCGGGAGAATTATGGAATTCTATGTTTCGGACA TR:VR 151:4 96:0 chr20 44808086 r_519 A . PASS END=44829888;SVTYPE=DUP;SVLEN=21802;SVINSLEN=21;SVINSSEQ=ATATATATAATACCTAAGAAC TR:VR 78:7 34:0 chr3 111541620 d_1215 G . PASS END=111541710;SVTYPE=DEL;SVLEN=-90 TR:VR 31:4 24:0 chr3 28622927 d_1191 T . Too_small_size END=28622964;SVTYPE=DEL;SVLEN=-37 TR:VR 40:6 22:0 chr4 123498682 i_939 C . PASS END=123498682;SVTYPE=INS;SVINSLEN=201;SVINSSEQ=CAAAAGATAGATATAGAGAGATAGATATATCTCCAAAAGATAGATATAGAGAGATAGATATATCTCCAAAAGATAGATATAGAGATAGATAGATATATCTCCAAAAAAGATAGATATAGAGAGATAGATATATCTCCAAAAGATAGATATAGAGAGATAGATATATCTCAAAAGATAGATATAGAGAGATAGATATATCTC TR:VR 44:3 17:0 chr6 55726260 d_1392 C . PASS END=55726351;SVTYPE=DEL;SVLEN=-91 TR:VR 30:18 25:0 chr8 140770906 r_789_0 A AT]chr8:140781194] . PASS SVTYPE=BND;MATEID=r_789_1;SVINSLEN=1;SVINSSEQ=T TR:VR 144:9 25:0 chr8 140781194 r_789_1 T TA]chr8:140770906] . PASS SVTYPE=BND;MATEID=r_789_0;SVINSLEN=1;SVINSSEQ=A TR:VR 144:9 25:0 chr8 53349153 d_1509 C . Too_low_VAF;Too_small_size END=53349189;SVTYPE=DEL;SVLEN=-36 TR:VR 90:3 24:0 chr9 129632786 d_1596 A . PASS END=129632838;SVTYPE=DEL;SVLEN=-52 TR:VR 35:6 13:0 chr9 98533494 d_1591 C . Too_small_size END=98533540;SVTYPE=DEL;SVLEN=-46 TR:VR 29:9 16:0 chrX 144980663 d_1761 T . PASS END=144981001;SVTYPE=DEL;SVLEN=-338 TR:VR 31:7 20:0 chr1 156447914 r_54 A . Too_low_VAF END=221104921;SVTYPE=DEL;SVLEN=-64657007;SVINSLEN=3;SVINSSEQ=GAT TR:VR 134:5 42:0 chr10 27993761 d_256 G . PASS END=27994195;SVTYPE=DEL;SVLEN=-434 TR:VR 59:3 18:0 chr10 69060715 r_118_0 G ]chr17:77120538]A . PASS SVTYPE=BND;MATEID=r_118_1 TR:VR 108:7 37:0 chr17 77120538 r_118_1 A A[chr10:69060715[ . PASS SVTYPE=BND;MATEID=r_118_0 TR:VR 108:7 37:0 chr11 32556057 r_144_0 T ]chr19:8200946]C . PASS SVTYPE=BND;MATEID=r_144_1 TR:VR 49:6 37:0 chr19 8200946 r_144_1 C C[chr11:32556057[ . PASS SVTYPE=BND;MATEID=r_144_0 TR:VR 49:6 37:0 chr11 89846564 r_174_0 T [chr17:73413377[T . Too_low_VAF SVTYPE=BND;MATEID=r_174_1 TR:VR 105:4 40:0 chr17 73413377 r_174_1 T [chr11:89846564[T . Too_low_VAF SVTYPE=BND;MATEID=r_174_0 TR:VR 105:4 40:0 chr12 14089844 d_354 A . PASS END=14089987;SVTYPE=DEL;SVLEN=-143 TR:VR 32:7 13:0 chr13 62726187 d_411 C . Too_small_size END=62726230;SVTYPE=DEL;SVLEN=-43 TR:VR 33:18 14:0 chr14_GL000225v1_random 102535 d_579 T . Too_low_VAF END=102603;SVTYPE=DEL;SVLEN=-68 TR:VR 599:7 495:1 chr16 1727111 r_321 G . PASS END=1732307;SVTYPE=DUP;SVLEN=5196;SVINSLEN=12;SVINSSEQ=GTGTGGAGGGTC TR:VR 59:4 28:0 chr17 4458991 r_349_0 C [chr9:122789928[TTGATTCCCCTCTTGATTG . PASS SVTYPE=BND;MATEID=r_349_1;SVINSLEN=18;SVINSSEQ=TTGATTCCCCTCTTGATT TR:VR 74:6 42:0 chr9 122789928 r_349_1 G [chr17:4458991[AATCAAGAGGGGAATCAAG . PASS SVTYPE=BND;MATEID=r_349_0;SVINSLEN=18;SVINSSEQ=AATCAAGAGGGGAATCAA TR:VR 74:6 42:0 chr19 39812090 r_430 A . PASS END=39815921;SVTYPE=DUP;SVLEN=3831 TR:VR 41:5 18:0 chr2 36519798 r_449 A . PASS END=36524282;SVTYPE=DUP;SVLEN=4484 TR:VR 46:5 20:0 chr20 45999389 r_520_0 A [chr4:17793860[A . PASS SVTYPE=BND;MATEID=r_520_1 TR:VR 87:13 42:0 chr4 17793860 r_520_1 A [chr20:45999389[A . PASS SVTYPE=BND;MATEID=r_520_0 TR:VR 87:13 42:0 chr3 33536716 r_547 G . Too_low_VAF END=33549718;SVTYPE=DUP;SVLEN=13002;SVINSLEN=1;SVINSSEQ=C TR:VR 97:3 28:0 chr5 180924392 r_665 C . PASS END=180941897;SVTYPE=DUP;SVLEN=17505 TR:VR 61:18 35:0 chr5 79183314 d_1352 A . PASS END=79183972;SVTYPE=DEL;SVLEN=-658 TR:VR 24:3 20:0 chr7 97755436 d_1466 A . PASS END=97755520;SVTYPE=DEL;SVLEN=-84 TR:VR 26:16 24:0 chr8 56095539 r_748_0 A [chr8:56099979[G . PASS SVTYPE=BND;MATEID=r_748_1 TR:VR 91:12 21:0 chr8 56099979 r_748_1 G [chr8:56095539[G . PASS SVTYPE=BND;MATEID=r_748_0 TR:VR 91:12 21:0 chr1 157208483 d_194 G . PASS END=157208530;SVTYPE=DEL;SVLEN=-47 TR:VR 51:11 19:0 chr10 29064809 r_103_0 C [chr10:29082102[T . PASS SVTYPE=BND;MATEID=r_103_1 TR:VR 115:7 34:0 chr10 29082102 r_103_1 T [chr10:29064809[T . PASS SVTYPE=BND;MATEID=r_103_0 TR:VR 115:7 34:0 chr10 69060878 r_119_0 A A[chr17:77105861[ . PASS SVTYPE=BND;MATEID=r_119_1 TR:VR 110:7 34:0 chr17 77105861 r_119_1 A ]chr10:69060878]A . PASS SVTYPE=BND;MATEID=r_119_0 TR:VR 110:7 34:0 chr11 35591191 i_170 T . PASS END=35591191;SVTYPE=INS;SVINSLEN=100;SVINSSEQ=ATCTATCTATCTATCTATCTATCTATCTATCTGTTCTAATACTATCTCTTATAATGTACTTGCTAAAAATGCATCCCTAAAAACATGGAGCTTTCTACAA TR:VR 45:14 18:0 chr11 89846770 r_175_0 A A]chr17:73749769] . PASS SVTYPE=BND;MATEID=r_175_1 TR:VR 98:5 43:0 chr17 73749769 r_175_1 G G]chr11:89846770] . PASS SVTYPE=BND;MATEID=r_175_0 TR:VR 98:5 43:0 chr12 14466425 d_355 G . Too_small_size END=14466464;SVTYPE=DEL;SVLEN=-39 TR:VR 36:17 19:0 chr12 95842555 r_220_0 A ACC[chr13:52123840[ . PASS SVTYPE=BND;MATEID=r_220_1;SVINSLEN=2;SVINSSEQ=CC TR:VR 84:5 43:1 chr13 52123840 r_220_1 A ]chr12:95842555]GGA . PASS SVTYPE=BND;MATEID=r_220_0;SVINSLEN=2;SVINSSEQ=GG TR:VR 84:5 43:1 chr13 64228811 d_412 A . PASS END=64228869;SVTYPE=DEL;SVLEN=-58;SVINSLEN=1;SVINSSEQ=A TR:VR 27:14 22:0 chr2 111183962 r_473_0 C CCTTTCACCTTTCAACTTT[chr9:113745212[ . PASS SVTYPE=BND;MATEID=r_473_1;SVINSLEN=18;SVINSSEQ=CTTTCACCTTTCAACTTT TR:VR 51:7 46:0 chr9 113745212 r_473_1 C ]chr2:111183962]AAAGTTGAAAGGTGAAAGC . PASS SVTYPE=BND;MATEID=r_473_0;SVINSLEN=18;SVINSSEQ=AAAGTTGAAAGGTGAAAG TR:VR 51:7 46:0 chr20 45999628 r_521_0 C C]chr4:17810480] . PASS SVTYPE=BND;MATEID=r_521_1 TR:VR 85:13 40:0 chr4 17810480 r_521_1 T T]chr20:45999628] . PASS SVTYPE=BND;MATEID=r_521_0 TR:VR 85:13 40:0 chr3 113774261 d_1216 A . PASS END=113775270;SVTYPE=DEL;SVLEN=-1009;SVINSLEN=1;SVINSSEQ=A TR:VR 41:8 25:0 chr3 36071701 d_1192 A . PASS END=36072982;SVTYPE=DEL;SVLEN=-1281 TR:VR 38:6 21:0 chr4 188868735 i_962 T . Too_small_size END=188868735;SVTYPE=INS;SVINSLEN=48;SVINSSEQ=CTCTAGCTCTCGCTGTGTGCCCTCCATAATTCCTCCTGCCACCACTCT TR:VR 37:5 25:0 chr5 82615738 d_1353 G . Too_small_size END=82615780;SVTYPE=DEL;SVLEN=-42 TR:VR 26:10 16:0 chr9 131950904 i_1295 T . PASS END=131950927;SVTYPE=INS;SVINSLEN=908;SVINSSEQ=AACTGTGAGAAATAAAATGTCTGTTGCTGATAAGCGACCCAATCTATGGAATTTTGTTATGGCAGTCTGAAAAGACTAAGACAGTGGTCATTTGTCACAGCAATGATAGAAGACTCATATACCACCCACTGACTTGACTCATTATGAGCATATGCCACTAACGGGTTCATGGTGACAGGGCCATTTGCACACCAAGGGGAAATTCCCTGCCCTGCCCTACGGATTCCAGGTCTAGGCATGTGATTCACACTTAGGACAGCAAGGCACCAGCTCCTTCCTCACACCTCCCTAGCACAGCATTCTCACCGTCATCCCTGCAAGTTTGAGCTGTGGACTCAGACACCTGCATTTGAGCTCCTTCCCGGCCACTTATCAAGAGATAATCACAGATAAGAATAAAAACATATGGCCGTTGTAGAGATTAAATAAGCGATCATGTAAAGTGCTTTCCCCAGTGCCTGGCATGTTCATAGATGCTCGACAAACATGAGATTTTAGTGTAATAATAGTTTGACCGTATACCATCTTAGGACATTTCAATTTAGATGATTTAGGGGAGAGGAGCCCACAGTTTAACTGGGAGAAATTTCATTCTGAAGATAAGTGGGAAAAGGAGAAGTGGTAATTATTTTCTAAGTGGATCAGTATGGAGAAATGAGCTTTCTGGAAAACCAGGCAGCTGGAGGCTGGATGACTGCTGAGGGATGCCTGGTCACTGCTCCAGATTTTTTTCTCAGGATGAGACTATAAAGAAGCTGACTTTGAGTTCTGTTCAAGGACTTCGACAGCCCAGTGTTTGTAAGTATTTCCTTAATTGGAAAAGCATTATGATTTGAGTAGATAGTGTTAGAAGGGAGCGGTAAGCCGGAGTGAGGAAGTAAGTAGTCGGTGGCTGAGCCGAAGCTCCT TR:VR 44:3 16:0 chr1 158882772 r_55 C . PASS END=158890534;SVTYPE=DEL;SVLEN=-7762 TR:VR 49:5 29:0 chr1 220467287 r_82 T . Too_low_VAF END=220477302;SVTYPE=DUP;SVLEN=10015 TR:VR 112:3 25:0 chr1 25557617 r_13 T . PASS END=25674541;SVTYPE=DUP;SVLEN=116924 TR:VR 66:9 40:0 chr10 29094387 r_104_0 G G]chr10:29147030] . PASS SVTYPE=BND;MATEID=r_104_1 TR:VR 117:10 33:0 chr10 29147030 r_104_1 A A]chr10:29094387] . PASS SVTYPE=BND;MATEID=r_104_0 TR:VR 117:10 33:0 chr10 69575570 r_120_0 T T[chr14:69641017[ . Too_low_VAF SVTYPE=BND;MATEID=r_120_1 TR:VR 68:3 42:0 chr14 69641017 r_120_1 C ]chr10:69575570]C . Too_low_VAF SVTYPE=BND;MATEID=r_120_0 TR:VR 68:3 42:0 chr11 92874054 r_176_0 T T]chr2:67163321] . PASS SVTYPE=BND;MATEID=r_176_1 TR:VR 61:10 39:0 chr2 67163321 r_176_1 C C]chr11:92874054] . PASS SVTYPE=BND;MATEID=r_176_0 TR:VR 61:10 39:0 chr12 98820003 r_221 T . PASS END=98975387;SVTYPE=DEL;SVLEN=-155384;SVINSLEN=4;SVINSSEQ=TTTC TR:VR 102:8 48:0 chr16 19605881 d_658 T . Too_small_size END=19605918;SVTYPE=DEL;SVLEN=-37 TR:VR 38:17 21:0 chr17 73732162 d_798 A . PASS END=73732298;SVTYPE=DEL;SVLEN=-136 TR:VR 66:7 21:0 chr2 18840978 d_912 T . Too_small_size END=18841013;SVTYPE=DEL;SVLEN=-35 TR:VR 55:29 17:0 chr20 462501 d_1051 C . PASS END=462553;SVTYPE=DEL;SVLEN=-52 TR:VR 35:11 30:0 chr5 105786212 i_1030 C . PASS END=105786212;SVTYPE=INS;SVINSLEN=243;SVINSSEQ=GCTTTCTTCTAGTCCTTCTAATCCTGAAAATAAAAAAAAAAGAATACATAAACCAGAACCTAAGATATGTTGTTCTATTTATCTCTATTGCAGTACAATAGATTGAGACCCTATCTGGGAAAAGAAAGAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGACTGGGAATGATCTAGATGATAAGATGTATTTTTCCAAGACTCATAAAAACAATTGG TR:VR 25:17 25:0 chr6 166272102 i_1107 C . PASS END=166272102;SVTYPE=INS;SVINSLEN=129;SVINSSEQ=AAAGGGCCTTGATCCCCTGGTACAGCCTGCCGGACGGGAAAACCGCTACTGTTTGTAAAGAACGTGCTGTTTACACAGCATTTTCCCTTTGCAGCCTCCAGCTAGCAGCCTCCATCTGACCCAAAACAA TR:VR 42:19 19:0 chr8 100000600 d_1530 T . Too_low_VAF END=100001136;SVTYPE=DEL;SVLEN=-536 TR:VR 84:4 15:0 chr9 132200896 d_1597 G . PASS END=132201105;SVTYPE=DEL;SVLEN=-209 TR:VR 29:3 13:0 chr1 221824583 r_83 G . Too_low_VAF END=221837698;SVTYPE=DUP;SVLEN=13115;SVINSLEN=5;SVINSSEQ=TTTAA TR:VR 92:3 32:0 chr1 25672653 r_14_0 T T]chr16:53656334] . Too_low_VAF SVTYPE=BND;MATEID=r_14_1 TR:VR 89:3 37:0 chr16 53656334 r_14_1 C C]chr1:25672653] . Too_low_VAF SVTYPE=BND;MATEID=r_14_0 TR:VR 89:3 37:0 chr10 29350543 i_122 C . PASS END=29350543;SVTYPE=INS;SVINSLEN=68;SVINSSEQ=GATATTCACACAATGGAATACAGGTTGAGTATCCCTTATCCAAGTGCTTGGGACCAGAAATGTTTCAG TR:VR 52:9 21:0 chr12 16009235 r_192 G . PASS END=16042521;SVTYPE=DUP;SVLEN=33286 TR:VR 92:13 37:0 chr12 99744974 d_370 A . PASS END=99745022;SVTYPE=DEL;SVLEN=-48 TR:VR 46:20 12:0 chr13 69621723 r_248 T . PASS END=70528000;SVTYPE=DUP;SVLEN=906277;SVINSLEN=2;SVINSSEQ=TA TR:VR 80:14 35:0 chr16 21166475 d_659 C . PASS END=21172206;SVTYPE=DEL;SVLEN=-5731 TR:VR 52:10 25:0 chr17 45583235 r_369_0 A [chr9:107775291[G . Too_low_VAF SVTYPE=BND;MATEID=r_369_1 TR:VR 112:4 52:1 chr9 107775291 r_369_1 G [chr17:45583235[G . Too_low_VAF SVTYPE=BND;MATEID=r_369_0 TR:VR 112:4 52:1 chr17 74525241 r_403 C . PASS END=74538179;SVTYPE=DUP;SVLEN=12938 TR:VR 117:8 29:0 chr2 113208945 r_474 G . PASS END=114069868;SVTYPE=DUP;SVLEN=860923 TR:VR 79:9 38:0 chr2 194783713 r_497_0 G ]chr22:35075383]A . PASS SVTYPE=BND;MATEID=r_497_1 TR:VR 63:10 36:0 chr22 35075383 r_497_1 A A[chr2:194783713[ . PASS SVTYPE=BND;MATEID=r_497_0 TR:VR 63:10 36:0 chr20 46604518 d_1098 A . Too_small_size END=46604553;SVTYPE=DEL;SVLEN=-35 TR:VR 28:5 12:0 chr3 39251724 r_548_0 G ]chr4:107139064]G . PASS SVTYPE=BND;MATEID=r_548_1 TR:VR 54:5 38:0 chr4 107139064 r_548_1 G G[chr3:39251724[ . PASS SVTYPE=BND;MATEID=r_548_0 TR:VR 54:5 38:0 chr4 130233744 r_607_0 C ]chrX:51607654]A . PASS SVTYPE=BND;MATEID=r_607_1 TR:VR 77:6 34:0 chrX 51607654 r_607_1 A A[chr4:130233744[ . PASS SVTYPE=BND;MATEID=r_607_0 TR:VR 77:6 34:0 chr4 188975119 i_963 A . PASS END=188975119;SVTYPE=INS;SVINSLEN=258;SVINSSEQ=TGATGTCCCTACAGGGCGGGGAGTGAAGCCCCTACAGGGCGGGGAATGATGTCCCCACAGGGCGGGGAGTGATGTCCCCACAGGGCGGGGAATGATGTCCCTACAGGGCGGGGAGTGATGTCCCCACAGGGGGGGGAGTGATGTCCCCACAGGGCGGGGGGAATGATGTCCCTACAGGCGAGGGAATGATGTCCCCACAGGGGGGGGAATGATGTCCCTACAGAATGCGGGGAGTGATGTCCCCACAGGGCGGGGAGT TR:VR 42:12 20:0 chr5 85328640 d_1354 C . PASS END=85328792;SVTYPE=DEL;SVLEN=-152 TR:VR 39:14 16:0 chr8 25202629 d_1491 C . Too_small_size END=25202668;SVTYPE=DEL;SVLEN=-39 TR:VR 31:9 18:0 chrY 56839819 d_1824 G . Too_low_VAF END=56842080;SVTYPE=DEL;SVLEN=-2261;SVINSLEN=9;SVINSSEQ=CTGCTTTGT TR:VR 385:3 237:0 chr1 222936116 d_212 A . PASS END=222937063;SVTYPE=DEL;SVLEN=-947 TR:VR 63:8 19:0 chr10 114689885 d_302 G . PASS END=114690277;SVTYPE=DEL;SVLEN=-392 TR:VR 38:5 22:0 chr11 99819283 r_177_0 C ]chr13:49061825]C . PASS SVTYPE=BND;MATEID=r_177_1 TR:VR 76:7 53:1 chr13 49061825 r_177_1 C C[chr11:99819283[ . PASS SVTYPE=BND;MATEID=r_177_0 TR:VR 76:7 53:1 chr12 19265633 r_193 A . PASS END=19280004;SVTYPE=DUP;SVLEN=14371;SVINSLEN=1;SVINSSEQ=T TR:VR 58:12 28:0 chr16 2164122 d_654 T . PASS END=2164182;SVTYPE=DEL;SVLEN=-60 TR:VR 47:9 13:0 chr17 45583245 r_370_0 C C]chr9:107778302] . Too_low_VAF SVTYPE=BND;MATEID=r_370_1 TR:VR 113:5 53:1 chr9 107778302 r_370_1 A A]chr17:45583245] . Too_low_VAF SVTYPE=BND;MATEID=r_370_0 TR:VR 113:5 53:1 chr17 74648222 r_404 G . PASS END=74657446;SVTYPE=DUP;SVLEN=9224 TR:VR 117:8 26:0 chr19 40861630 d_871 G . PASS END=40861818;SVTYPE=DEL;SVLEN=-188 TR:VR 43:10 25:0 chr2 203190691 r_498_0 G ]chr7:140621439]C . Too_low_VAF SVTYPE=BND;MATEID=r_498_1 TR:VR 71:3 48:0 chr7 140621439 r_498_1 C C[chr2:203190691[ . Too_low_VAF SVTYPE=BND;MATEID=r_498_0 TR:VR 71:3 48:0 chr20 48622504 d_1099 A . Too_small_size END=48622544;SVTYPE=DEL;SVLEN=-40 TR:VR 51:35 18:0 chr3 39259923 r_549_0 T T[chr4:107138890[ . PASS SVTYPE=BND;MATEID=r_549_1 TR:VR 63:6 35:0 chr4 107138890 r_549_1 A ]chr3:39259923]A . PASS SVTYPE=BND;MATEID=r_549_0 TR:VR 63:6 35:0 chr4 131208816 i_941 C . PASS END=131208816;SVTYPE=INS;SVINSLEN=54;SVINSSEQ=ATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTTA TR:VR 27:11 20:0 chr4 188975232 i_964 A . Too_small_size END=188975232;SVTYPE=INS;SVINSLEN=23;SVINSSEQ=GTGATGTCCCCACAGGGGGGGGA TR:VR 42:6 20:0 chrX 153970700 r_833 C . PASS END=153978950;SVTYPE=DUP;SVLEN=8250 TR:VR 52:5 25:0