ELF>s@@AVIAUAATAUSH~` D9tSHt^@BtuH5L1AuL D9uDDAuf[]A\A]A^H=L@H=LDH=Lj[]A\A]L A^fDAWHHH5AVAUATUSHH8H$HH$HH$HH$HH$HH$HH$H$$ f$$HI7H=HH=LH=L.HHX$HHLH H9uH=LH=L.HHX$HHLH XH9uH=LHHPdL HjdHHLHH9uL9t*HHH5HH81H=LHHPdL HjdHHLHH9uL9tHH=LHHPdL HjdHHLH/H9uL9tHfH=LHHPdL HjdHHLHH9uL9tHH=L H=L#HHHLHkH9uH=L H=L#HHHLH H9uH=LH=L#HHHLHH9uH=LH=L#HHHLHQH9uH=LE1L-H$HD$IńHT$LE1JTHT$HT$H5L11JLHT$H<+LHHduIHdIuII IuH=LE0L-IńHD$LE1JDHD$HD$HT$H5L1JL1H|LH#HduIHdIuII IuH=LHH$ HDŽ$H$H”H$H$HD$HDŽ$L|H$H$H$HD$E1H$LlH$H5ML11A LH<+LH0HduIHdIuH$H$H$oH$H$H$H=LHHDŽ$HH$H$HT$HDŽ$L|H$H$H$HT$E1H$LlH$H5ML11A LH<+LHHduIHdIuH$H$H$oH$H$H$H=LHHDŽ$HTZH$HD$H$HDŽ$HTH$HT$(H$HD$H$HD$pHTH$HT$ HD$xHT$pH$E1Ll$xD|fDH$LL$ H5ImPDL1LEDHT$(HLHH9uIIdIuHD$pHD$xH|$plH$H$ H$H$H$ NH$H=LHHD$`HTZHD$hHD$HT$`HD$PHTHD$hHT$8HD$XHD$HT$PHD$@HTHD$XHT$0HD$HHT$@H$E1Ll$HD|H$LL$0H5ImPDL1LEDHT$8HLH`H9uIIdIuHD$@HD$HH|$@sHD$PHD$X H|$P1HD$`HD$h NH|$`H=L 1I$I$I$H=L H=L H=L H=LH=L ZH=L H=L8H=L'HH5LDHDHH1HH5LPH1H=LL-HH=ILeHIH)HHHH9s!AMH5HL1HLH=L 1IL%HH=ILmIHH9v"AL$H5HL1HLH=LH8L[]A\A]A^A_fAWAAVAUATUSHHH|$;HD$8Lt$ E1D$HD$H=HI(H5LHHt>H5HHHUtHPHHu1Z:D$!:D$":D$#utD$ $ > I!I/   I  : ; : ;I8 &I : ; : ; I8  : ; ( ( .: ; ' @: ; I: ; I4: ; I.? : ;' @: ;I4: ;I4: ;I4: ;I   .: ;' : ;I.: ; ' I@4: ; I 4: ; I !4: ; I "4: ; I#1UX Y $1% U&41' U(4: ; I).: ;' @*4: ;I+.: ;' I , -4: ;I. /.? : ; ' @041 14121X Y 34: ; I44: ; I? < 5!8intiib. .  b# # # # # #( #0 #8 #@ #H #P #X #` !#h #b#p 'b#t )p#x -F# .T# /# 3# <{# E# F# G# H# I-# Kb# M# ?   # # b# 'SSHHPBILMMIMMHMMM DE5 DE3   MLTLTRITENINApAbnlbfpGibbGcb~ibkb ibkb7i"bk"bai)bk)biEbkEblEbiObkOblOb p1Ybp2YbiYbjYbIp1ebp2ebiebjebp1qbp2qbiqbjqbkqbp1~bp2~bi~bj~bk~b-cp1cp2arrAbib pbposb ppbrb!b" buf# $%&& 'I(-(-%((b(-(-((b(-(-((b)I 87Y i9b*cp:Y bI ) !  *cp"*i#b*j#b*k#b*l#b*m#b b )    *cp *ib*jb*kb b   cpibjb b l  cpib bl  Acp۟ ! ibcp͟! b +.,} ----.--b, ----.--b, ----.--b,% ----.--b,] ----.--b, ----.--b, ----.--b,----.--b,=----.--b,u----.--b,----.--b,----.--b,----.--b,U----.--b,----.--b,----.--b,----.--b,5----.--b,m----.--b,----.--b,----.--b,----.--b,M----.--b.----.--bHcpI-Jbocpp-q ibrbbuf<ibrbbufb]cp^-_brbibjbkblb,mbnb.mbnb/BA"C!C(D.rEb(Eb#_' a$9 #y%&0#z%&&&1N1Z1g1s21 {%&&%&/2qx&0#r%&&&&&&&&63 fp=G !>@ 4444'b4 {4 {b4444 4 4 4 ,b4444b4`4`b4 4! b4#4$4(b4)b4*b4.b4/I 42b44b546b547494:Z /usr/include/usr/include/bits/usr/lib/gcc/x86_64-redhat-linux/4.1.2/include./../Hread_epars.cstdio.hlibio.htypes.hstddef.henergy_par.h 1+?Yx Xyd, 1o#beYY;=j+[+[/~<WX~X/~<WX~X/~<WXt/<WXX'['['[']77n*7nGm$ :m$ I$ I <lY7$',3"s={z.^;=fg;=i-~ 7m.0WKK=??YwYCfbJ.kytJ <tJ XtZFoa\0gefx,]<MV x$bjU zeXU oiM]TjVo~3o%|=(ZXugggggggggggggggggggg}f<;=g#GY;1HY;vIZ}t=j<9 g}Du+ <;=g?GuK=uZU"}J!]yJ(}~XJ}f}O4}JO4}JH}JA{J> ;A;> INF -INf DEF%6dNPCGGCGUUGAUUA @wcan't open file %s ## RNAfold parameter file # stack_energies # stack_enthalpies # mismatch_hairpin # mismatch_interior # mismatch_multi # mismatch_enthalpies # dangle5 # dangle3 # dangle5_enthalpies # dangle3_enthalpies # int11_energies /* %2s..%2s */ # int11_enthalpies # int21_energies /* %2s.%c..%2s */ # int21_enthalpies # int22_energies /* %2s.%c%c..%2s */ # int22_enthalpies # hairpin # bulge # internal_loop # ML_params %6d %6d %6d %6d # Tetraloops %.6s %4d # Triloops %.5s %4d #END @ACGU/**/can't extrapolate first valueDEFINFNST%d%15s%n rd_dangle: %s rd_loop: %s rd_stacks: %s r File %s is inproper. ## RNAfold parameter file# %31sstack_enthalpiesstack_energieshairpinbulgeinternal_loopmismatch_hairpinmismatch_interiormismatch_multimismatch_enthalpiesint11_energiesint11_enthalpiesint21_energiesint21_enthalpiesint22_energiesint22_enthalpiesdangle5dangle3dangle5_enthalpiesdangle3_enthalpiesML_paramsNINIOTetraloopsTriloopsENDrd_MLparams: %s rd_F_ninio: %s %6s %d%5s %d%f/* CG GC GU UG AU UA @ */ /* @ A C G U */ /* F = cu*n_unpaired + cc + ci*loop_degree (+TermAU) */ /* cu cc ci TerminalAU */ # NINIO /* Ninio = MIN(max, m*|n1-n2| */ /* m max */ %3d %4d unexpected end of file in get_array1unclosed comment in parameter filerd_int22: in field int22[%d][%d][%d][%d][%d] %s rd_int21: in field int21[%d][%d][%d] %s rd_int11: in field int11[%d][%d] %s rd_mismatch: in field mismatch[%d] %s read_parameter_file: can't open file %s using default parameters instead. Missing header line in file. May be this file has incorrect format. Use INTERRUPT-key to stop. Unknown field identifier in `%s' WARNING: stacking energies not symmetric WARNING: stacking enthalpies not symmetric WARNING: int11 energies not symmetric WARNING: int11 enthalpies not symmetric WARNING: int22 energies not symmetric WARNING: int22 enthalpies not symmetric: %d %d %d %d %d %d ?x 4BGE D(A0<W BWB B(A0A8J<BEB B(A0A8D$]ADF <BOB B(A0A8Dp<BHI B(A0A8D@,BHH A(D0$\AFH =D$ZAFH < BIB B(A0D8GzRx ,BGE D(A04LW BWB B(A0A8J4BEB B(A0A8D]ADF 4BOB B(A0A8Dp4BHI B(A0A8D@$LBHH A(D0t\AFH =DZAFH 4 BIB B(A0D8Gw w ww w(w0USUSUT~]~T]TQ\\R^R^Tw)w)+w+-w -.w(./w0/9w89gwU&S,SP`^`gUprwrwwwywy{w {|w(|}w0}w8!wpU!pT_T_!_\\!\VVV PZZP] ]!]SSS!SPV!V01w15w5;w;w 0;U;gVhV;OPRrPrQwwww w(w0w8wUPP|P[Ln[[Z5nZZm_n_i]n]eVnVwwww w(w0w8]wUP9P9SY._/]_*]/]]&V/]V`bwbjwjrwrsw sww(ww0`UwPPXh]]wVVwwwLw U P/P/BR$V%LVPTwTwP^UarPrQwwww UVVPPQwwww w(w0 w8  !wUV4VvVV !V+.P.HSHOPOrSrr~|S\S~~SP((PPQPr;^H\^a^^ ^ ^ !^rS4SSr\VvVV !Vr^4;^H\^^ ^ ^ !^rSdSSrV4\VV !V9IPPQ~^ Q 7^7:Q:=]WjQj]XQ$hX2X5[1[~[~?SY_$P_PnYny_y_5Y5U~UX_[R[Z]Uv]vUU5]55Z5XUX_11_1kUkZZ_XZ_YS5^Y^z^1]^]Y_^Y_5]T]T5zSS]T^]^pTp]SS?Mwrite_parameter_fileread_parameter_file, ! !!  B B U2e7NU2e7N4PdPd4psv|7U2eN7U2eNgettypelastcheck_symmetrydangle5_37_shortbuf_IO_lock_t/projects/remc_bigdata/miR/ViennaRNA-1.8.5/libstderr_IO_buf_endtempstacksUNKNOWNlooprd_int21_IO_write_endunsigned intrtempint22_flagsINT11lineint21_37_markersdisplay_arrayINT22_Hshort intMAX_NINIOint22_HMISCINT11_HF_ninio37rd_loopint21INT21INT22bulge37_posstdoutmismatchM37floatrd_Tetra_loopoutfpchangedrd_danglelong long unsigned inthairpin37_offsetrd_niniord_MLparams_fileno__pad2pnamessize_tdangle3_H_vtable_offsetint21_H_IO_read_base_IO_save_endTriloop_E37TETRA_ENERGY37dangle3_37DE5_Hbnames__s1_lenQUITchar_mode_IO_write_base_IO_read_ptridenttypeparset$Id: read_epars.c,v 1.10 2004/12/10 16:32:35 ivo Exp $read_parameter_fileML_intern37get_array1_IO_markerTetraloopslong long int__s2_len_IO_save_baserd_int22HELPdanglesize_IO_backup_base__pad1__pad3__pad4__pad5stack37fnamemismatchH37__result__s1DE3_Hrd_int11dangle5_Hrd_stacksread_epars.cDUMPunsigned charvaluesGNU C 4.1.2 20080704 (Red Hat 4.1.2-48)_IO_read_endint11long intint22_37ML_BASE37rd_miscINT21_Hinternal_loop37TerminalAUwrite_parameter_file_locklong unsigned int_old_offsetmism_Hstdin_IO_FILEignore_commentint11_37rcsidrd_Tri_loopML_closing37mismatchMM_H_sbuf_IO_write_ptrlxc37rd_mismatchmismatchI37__off_tsigned charshort unsigned intDuplexInitdoubleTriloops_chainFILE_flags2_cur_columnenthalpies_next_unused2_IO_buf_baseint11_H__off64_tGCC: (GNU) 4.1.2 20080704 (Red Hat 4.1.2-48).symtab.strtab.shstrtab.rela.text.data.bss.debug_abbrev.rela.debug_info.rela.debug_line.rodata.str1.1.rodata.str1.8.rodata.cst8.rela.debug_frame.rela.eh_frame.debug_loc.rela.debug_pubnames.rela.debug_aranges.debug_ranges.debug_str.comment.note.GNU-stack @ !8&L!,P!1P!D$?(&U;^Pa22@qp2DHHX  K MvgCg00 hP0Yl/?AH >L @^ e A+  B  d A  C% , E DW ^ w E  F  G  H  I   $ + 2 J? H O Ka h o v  L  M  N/8OJPQ#R4RER~SRTTTTUUU*UIVS WXYZn u[x \5 <]OY ^+ 2_>Hn u` ab $8cK Rddlxefghij0kGl^munopqrstu-vDw[xryz{  |7 K _ f}sz ~!1 =GS Z gl   E U e u     3 Z as  a  .   a l  ! 2 C T h y c   ! % ) <. 9 @ G \N U P\ j ;q H|   r     (  }  - < rK :Z bi $x        '   r# 3 yC S c ws  1     V   #( z3 ; A mp  W    " B _ H   Q     ] % f3 S [cgk p {     ]^<D7fnaI,fI N V      2 =pE!M a\ a ]k Jx   ^     0  &  d" 1- 2 = NV_ dj 1u}  ' d 1'    0  o V+ D d Hl t | a   5 ~   F |  ! ) ]1  6 <A c P  ^  l  z ;  `  q 5   e  & 0- 5 L=  B L 1 Z T g  4 P      .    d    , : K dW 1d p  d 1   d 1   d 1  + d7 1D P c do 1|   d 1   d 1    d 1$ 0 C dO 1\ h { d 1   d 1   d 1  # d/ 1< H [ dg 1t   d 1   d 1   d 1 ( ; dG 1T ` s d 1   d 1   d 1   d' 14 @ O d[ 1h t     ~ t A WV w    ! f      ( ; m@ S h  o x      d   &" + :$BM6Ub `z p      ^O ? U  @   #, 8A nH U [b ko *    N g <  b  - : LG T       D ' M4 A N  [ *h wu o  =  1  T X p 0 < @| `  P    Pp0P`xP