lib_LIBRARIES = libRNA.a

libRNA_a_SOURCES = dist_vars.c fold_vars.c part_func.c read_epars.c\
	treedist.c energy_par.c inverse.c ProfileDist.c RNAstruct.c utils.c\
	fold.c naview.c PS_dot.c stringdist.c params.c subopt.c list.c \
        Lfold.c cofold.c part_func_co.c ProfileAln.c duplex.c alifold.c \
	alipfold.c aln_util.c LPfold.c part_func_up.c ribo.c findpath.c MEA.c

libRNA_a_CFLAGS = $(AM_CFLAGS) @FPIC@

noinst_HEADERS = intloops.h list.h

EXTRA_DIST = circfold.inc alicircfold.inc

INCLUDES = -I$(srcdir)/../H