ELF>3@@fDAWAVAUIQ?ATIUSHL$aE1E1D$0D$8D$<9~eHcILA8-uA@4<<>HH1HHH=HHt<*tu<>uHĨ1[]A\A]A^A_ÿ1RH=D$4D$D$4D$IuAH LHu  LHu LHu LHuE9HcM,MLHD$8E9HcI<1XD$0AxIxf:1D$0 E9wHcM4LHD$<AxE9HcI<1E9H$HcI<:u:CHxHHH1HHxAĉDIEE~KHǍCHHtHH9t&HHDT$8Eu $ >   I : ;  : ;I8 &I : ; : ; I8 I !I/  : ; I8 .: ;' @ .? : ; ' I@: ; I4: ; I4: ; I 4: ; I4: ; I 4: ; I 4: ; I4: ; I? < 8intiih. b##### #(#0#8#@#H#P#X#`!#h#b#p'b#t)p#x-F#.T#/#3#<{#E#F#G#H#I-#Kb#M#n ?  # # b#z  s  ib#jb#wV#b"b"V$$%%&\&&~'(c(i)b)bl)bsym)br)b**kT++pf,b,b-b.b@-@-1A-A-]B-B-C-C-G-G-U-U-5--hbbpl l   3r  (   (  b b b b bjb b!bH /usr/lib/gcc/x86_64-redhat-linux/4.1.2/include../H/usr/include/usr/include/bitsRNAfold.cstddef.hfold_vars.hstdio.hlibio.htypes.h ~nx:2)X;S4<LX8JvY9wّY;=;gI=wJ t@si!7f<rjwUK&m na&!ƭ<=u:>us=~XHYH\M!Nu;YC .׼΃W1suhY/d,ޟ[ɻm~uYe=u<u<;=g.gKG`v&~_eu@ usage: RNAfold [-p[0]] [-C] [-T temp] [-4] [-d[2|3]] [-noGU] [-noCloseGU] [-noLP] [-e e_set] [-P paramfile] [-nsp pairs] [-S scale] [-noconv] [-circ] warning, depending on the origin of the circular sequence, some structures may be missed when using -noLP Try rotating your sequence a few times Input constraints using the following notation:< : base i is paired with a base j : base i is paired with a base j>imatching brackets ( ): base i pairs base j Input string (upper or lower case); @ to quit minimum free energy = %6.2f kcal/mol INFO: structure too long, not doing xy_plot Currently no partition function for circular RNAs. Please implement it! free energy of ensemble = %6.2f kcal/mol frequency of mfe structure in ensemble %g; %lf%d-noGU-noCloseGU-noLP-nsp-noconv-circ| : paired with another base. : no constraint at allx : base must not pair%s%s >%12s%sconstraints missing length = %d %s %s (%6.2f) scaling factor %f [%6.2f] ensemble diversity %-6.2f@fffffq@%zr?@@x  <j BBB L(D0C8GzRx  44j BBB L(D0C8Gwww"w "&w(&)w0)0w80z wpUpVUVUVGRV[V0U:DUDVUV.U.TVTnUn}V}UVUVUVU U V V V Vp z VKTK\TTTT\[\+T:e\\ \ \p z \VGRV[VBHPHOQOV V V p VPQSgSV][]] ] ] p ]X^[^^ ^ ^ p ^N^^ ^ ^p z ^Q]XV][:]:X]X]GXGT]TnXn}]}X]Xv] X ] X ] X ] X ]p u Xu z ]&TTVSP5S55U55Q5APQxQPQS[SSPS S Sp z ST\[\\ \ \ p \XXpzPPPPPP5PPP~~ ~ ~ p ~~~ ~ ~ p ~~~ ~ ~ p ~EWW  V V e e  # # P P z ^~z ~~~~ ~ ~ p ~f~z ~n~z ~S[SS Si z S SV S ( SA P SKmain,z _shortbuf_IO_lock_tstderrsfact$Id: RNAfold.c,v 1.18 2005/10/30 20:07:12 ivo Exp $_IO_buf_endcstrucgfname_IO_write_endunsigned int_flagslinebondT_markersshort intdangles_posRNAfold.c_IO_write_baselong long unsigned intpf_scaleParamFile_offset_fileno__pad3bondsize_t_vtable_offsetnonstandards_IO_read_baseenergy_set_IO_save_endenergystring__resultargvtemperature/projects/remc_bigdata/miR/ViennaRNA-1.6.1/Progs__s1_lenchar_modeno_closingGU_IO_read_ptrtetra_loopscale2_IO_markerlong long int__s2_lennoGU_IO_save_baseisttystdout_IO_backup_basens_bases__pad1__pad2__pad4__pad5fname__s1base_pairfold_constraineddo_backtrackunsigned charGNU C 4.1.2 20080704 (Red Hat 4.1.2-48)_IO_read_endlong intlengthnoLonelyPairsusage_locklong unsigned int_old_offsetstdin_IO_FILEfloatargcrcsidnoconv_sbuf_IO_write_ptrffname__off_tcircsigned charshort unsigned intscale1maindouble_chainmin_enstructure_flags2_cur_column_next_unused2_IO_buf_base__off64_tGCC: (GNU) 4.1.2 20080704 (Red Hat 4.1.2-48).symtab.strtab.shstrtab.rela.text.data.bss.debug_abbrev.rela.debug_info.rela.debug_line.rodata.str1.8.rodata.str1.1.rodata.cst8.rodata.cst16.rela.rodata.rela.debug_frame.rela.eh_frame.debug_loc.rela.debug_pubnames.rela.debug_aranges.debug_str.comment.note.GNU-stack @z D& i ,, 1, ]D ?S0U.LPba2p2bph`hh0L. ig.08i00.2.22 ; B     @)) % + 1 7 =Ej JW_ft #*>GNUaen{RNAfold.cusagescale2scale1.LC38.LC29.LC30.LC31.LC32nrerrormaindo_backtrackdanglessscanfnoLonelyPairsread_parameter_filespacenonstandardsstdoutfilenoisattystdinget_lineputsfreeprintffold_constrainedstderrfwritenoGUno_closingGUenergy_settetra_looptemperaturestrlen__ctype_toupper_loccircfoldfflushstrcpyPS_rna_plotexppf_scaleinit_pf_foldstrncpypf_foldputcharfree_pf_arraysbase_pairfree_arraysfoldmean_bp_distPS_dot_plotfprintfenergy_of_struct 5  !"#$%=%T%q%%&'()* !+,%)**\ a+f @k p ~w-)'(. @+ 1+ N+ g+ p+ + +/, 10@ Q1_ p2~ "  # 3  !7 < C!V4. + 5 !.66$; K!S,[6h$o.78 -!  +-2&79]::;7 FS5[c<=>?@'<, 6-<NASB`,t&y9,, -/ H0C$CD C EV ` -l Cq ,~ - ) * ? F - :M GW x\ k p - - / H   I  G AS /b g 0  z  % ) . 9 @ G N ~U \ j q u|    9    ?  ` p ! V0 %? @N X] l {   '  #    Y ` ( g8 nH X t     Z       ) B0  8@ Q \dz l q H{  |  l      b  u n i    P y w+ 0 :  R  _  d en s s }   e       3  S  } :K   Yj & 6x>G R bjs ~         {) s6> P  M "  @ 3 9     * M7 D 2Q ^ q ~   T (08@HPX`hpx}c (08@HPX`hpx:  4 8 8