ELF>`8@@S~ [@ǃ@dH%@HHHt )ڃ~[1[NÐAWAVAUATUSHh"H$ D$X!ED$\!ED$`!E$d!$h!iD$l!E;D$x!ED$p!E1ED$t!1E$H!E1t$At$|!A[$!A/$@!D$,F$T!D$$D!$!$!z$!DH$!H8HH+H$==MtLH!E1H}-Htm1,t[HHcH WHEHc҈ t/:Nt'HHc׈ NGHH @HuH=AHT$@H$HH;D$(tHD$(H$9D$,HÉ}HD$ ElD|$ExH$HD$HT$ Ht$1Ialirna.pIalirna.gEL$!fDŽ$!sL$!Ƅ$!H=H=H|$H|$ H$Ht%1H|@HHHuHh"1[]A\A]A^A_Hl$!DH$!H!$D$,H$ E0HH$ E0HD$p!$ E1Eɉ"H$ 1D$t!IEH$ HD$x!ED$l!EƋ$h!aȋ$d!$H 4D$`!ED$\!H$ EHH$HD$H=¾1\$, H=H;fH|$ HD$0HHH=DEH|$0HT$,Ht$ H$yE=H333333?H'EH?HHuA3H$!H=H1HD$H=D$Ht$ 1 DEH$!Ialifold.L$!DŽ$!outHHXT$(Hlj1HHT$ H1IalidotL.fDŽ$!psƄ$!L$!; HD$8B D$8H |$8HcH<Ht$8HŅ^D$<E1ABDuADBDuADBDu 1@DŽ@"HHuL$(H$E1IJcTuHHTI<JcTuAHHTI $ >   I : ;  : ;I8 &I : ; : ; I8 I !I/  : ; I8  : ; .: ; ' I@: ; I4: ; I U4: ; I.: ;' I : ;I: ;I4: ;I4: ;I  .? : ; ' I@: ; I4: ; I 4: ; I 4: ; I!4: ; I " U#1UX Y$1%41&41'41 (!I/)4: ; I*4: ; I? < +4: ; I? < 18intii.s. b##### #(#0#8#@#H#P#X#`!#h#b#p'b#t)p#x-F#.T#/#3#<{#E#F#G#H#I-#Kb#M#y  # # b#  ~  4 'i(b#j)b#p*4#+.i/b#j/b#mfe/b#p04# hue04#sat04#1FBiCM#jDM#E b   b  ' (s# )s# *s# +s# ,b# -#( .s#0 /b#8 0s#@ 1b#H 2#P 3s#X 44#` 5#h 6s#p 7#x 8# 9s# :b# ;s# <# =# >s# ?b# @s# Ab# B# Cs# Db# Es# Fb# Gs# Hb# Is# J# K# Ls# M# N# Os# Pb# Q# Rs# S# T# Us# V# W# Xs# Y# Z# [s# \b# ]s# _M# `M# aM# bM# cM# dM# eM# fM# gM# hM# iM# jM# kM# lM# mM# nM# oM# pM# qM# rM# sM# tM# uM# w# xM#bc!bpos$ h hplh hbcpi ijbnjbsjbajbbjbzjbk ob ubvb; b R 'b'b'(y))))c)*R ~*R ~ *R +bi+b+bsym+br+b+b+b+bmis,bpf,b ,b -4 . . .!AS/b Z0b 1s " kTpl߶ s cp #$" $ $ "@ %. &9 &C &M &W &a %k 'u & b O s (   y    [   b      6)%  **** b* b* 6b* ;b* @b* Gb* Pb+csv Zb* ]b* ^*0* o* * * b* *  ./../H/usr/include/usr/include/bits/usr/lib/gcc/x86_64-redhat-linux/4.1.2/includepair_mat.hRNALalifold.cdata_structures.hRNALalifold_cmdl.hstdio.hlibio.htypes.hstddef.hfold.hfold_vars.halifold.h !c# Jv  ty YK\2*) z>2iOOjK;= fY9wˑY;=;gI=1wJ tKsKIYkYSxXo<!2f!~<zsɝyasfvdh,Z>Ārrv,h:vlfw<b[gM e#&W/Y;=iLh>$%gI=0K}.W=K;/J,jKoJXot }XYrcan't open %s no sequences found%s %s scaling factor %f %swalifold output %s Input aligned sequences in clustalw formatAlignment length < window size: setting L=%d can't open %s skipping output %d sequence; length of alignment %d ?@@_ACGUTXKIx OG< BBB B(A0A8GEzRx OG44 BBB B(A0A8GEwOw+U+0TP7AQAAPHNPPRwRTwTVwVXw XYw(YZw0Zaw8aZ wPUPT}D^G + Z ED^G + Z \D\1\^\G\ + \%2VDV1V^VGV + VQT$TD'^G + Z ``U``Q`lP|QPQ-0P2;VV^VGzV+ X VCXXZ s]D]^]G] + ]^X_D_^_G_ + _8F^QA^D^^  ^ Z ^P0S^SGSDSS9 SK Z SDuG + Z  S0:SSPSd  S+ Z S;VVz VX Z VD DL ?]] ]=\\ \R f Rf h QRf R  R5 main,Z >CN?A`+ Z h  Gd d + Z h  7d K Z   h 7\U Z   h d   zsw  h d   size_tunchangedncn_seq_IO_save_endnoLP_given_IO_write_basenoClosingGU_helppartfunc_givenfull_help_given_locksequencesargvcutoff_givenRNALalifold_args_infoparamFile_argistty_IO_save_basenonstandardsversion_help_chaindetailed_help_helpribosum_file_arg_cur_columneos_debug_modesfactFILElong intnoTetra_flagpfScale_givenncomppfScale_orig_IO_markermainshort unsigned intdangles_helpcutofffull_help_helpenergyhelp_helpsigned char_IO_FILEcsv_givenunsigned charplistargs_info_sbufnfactor_givenparamFile_helpcharspan_orig_IO_lock_t$Id: RNALalifold.c,v 1.1 2007/06/23 09:52:29 ivo Exp $detailed_help_givennfactor_argspan_givendangles_argreal_enencode_chardangles_origdangles_given_IO_read_ptrdouble__res_posstdinnsp_arg_markerspartfunc_argcutoff_origtemp_givennoGUcfactor_helpmfe_strucGNU C 4.1.2 20080704 (Red Hat 4.1.2-48)long unsigned intns_bases/projects/remc_bigdata/TCGA/RNA/ViennaRNA-2.0.0/Progs_flags2ribosum_file_givenenergyModel_arg_IO_read_baseparamFile_given_unused2RNALalifold.ccutoff_argdanglesribonoClosingGU_givencfactor_argpartfunc_help_old_offsetnfactor_helpenergyModel_helpno_closingGUdo_backtrackRibosumFilercsidaliaslong long int_IO_write_endenergyModel_origcode_IO_buf_basestring_nextunsigned intParamFile__pad1__pad2__pad3__pad4__pad5alioutnc_factmis_flag_flagsBP_pairnoGU_flagribosum_scoring_giveninputs_nummake_color_pinfo2cutoff_helpcsv_flagnsp_givenfranz_offsetpairnoClosingGU_flaglong long unsigned intpf_scalepfScale_helplength__off_tribosum_file_helpstructurepartfunc_origversion_givennfactor_origcsv_help_IO_backup_base_shortbuftemperatureunchangedcvargcffname__off64_tenergy_settemp_arg_IO_buf_endLaw_and_OrdernoGU_givenstderrshort intnoGU_helptetra_loopnoLP_helphelp_given_vtable_offsetfnameribosum_file_origclust_filespan_helpcpairnoLP_flagpfScale_argnamesbase_pairnoTetra_helpcfactor_givenmin_en_IO_read_endnsp_origmis_giventemp_help_filenonsp_helpspan_argfloatstdoutrtypemaxdistenergyModel_given_IO_write_ptrnoLonelyPairsbondTmis_helptemp_origribosum_scoring_helpgfnameinputscfactor_origparamFile_origribosum_scoring_flagcv_factnoTetra_givenGCC: (GNU) 4.1.2 20080704 (Red Hat 4.1.2-48).symtab.strtab.shstrtab.rela.text.data.bss.debug_abbrev.rela.debug_info.rela.debug_line.rodata.str1.1.rodata.str1.8.rodata.cst8.tdata.rela.debug_frame.rela.eh_frame.debug_loc.rela.debug_pubnames.rela.debug_aranges.debug_ranges.debug_str.comment.note.GNU-stack @Z I & , 1 $D 5?hT@UPka2Wp2  xk`H h l0 % +Pl+0hl0 , 0@.7. E7E7?P 0GO     )  1 7 = C ITjqP v  '.AKW^hmt '.BYRNALalifold.cencode_charLaw_and_OrderBP_pair.LC16.LC17.LC18.LC20energy_set_GLOBAL_OFFSET_TABLE_strchrmaindo_backtrackdanglesriboRNALalifold_cmdline_parserfopenRNALalifold_cmdline_parser_freeread_parameter_filespacenonstandardsstdoutfilenoisattyread_clustalstdinfclosestrlenupdate_fold_paramseos_debugconsens_misprintfbase_pairfreefflushRibosumFilecsv__strdupnc_factcv_factno_closingGUnoGUnoLonelyPairstetra_looptemperatureconsensusstderrfprintfnrerrorprint_tty_input_seq_strpf_scalealiLfoldputcharfwrite__ctype_toupper_locPS_color_dot_plot_turnRNALalifold_cmdline_parser_print_helpexit$ ,c m!"#M  $%"")&<'F(h(((()*+,- .%/<'F0Z1t2 $345)65555G7Q"g89"7:;9%9;<X=t>!?@AB 0 C D*-/*6+E-P UEf9F)6 55G;:/B4 >COBT +dCs >z3H  A$ C CI SCo'JI     K 5   L' M. B; `B CQ '  Z  Q% ) . 9 y@ G }N U \  j 6q +|  y $ 1  h    1 8  , ; J Y h w    n  =  p  - 4# ;3 BC IS %c  3 m       5  < K y y T T   $ 2 @ N \ )j ox  x  O ` *    `  _# Z2 A cP _ ?n }     ( w   @  " 1 @ O ^ m |  T  :  k z  R 3 ! m0 2? uN `] ]l {  Q  L  *   &  B  / > &M \ k z    O  8  n   v# v  Z   x P Z   |     ) . E8 @= #G L V @c h w  L   v $  z      [  % 0 ; F +_ o dy L @   G   P l     ]     $ J -  A J    o     ! >+ 8 E R _ Fl 5y 5    =       ( W  < @P 8 P