Version: Vancouver Short Read Analysis Package 4.0.16-dev.interval Version: Initializing class SeparateReads $Revision: 3125 $ Version: Initializing class Generic_AlignRead_Iterator $Revision: 3118 $ Version: Initializing class BedIterator $Revision: 2933 $ Version: Initializing class Log_Buffer $Revision: 2530 $ Info: 1000000 lines processed. Info: 2000000 lines processed. Info: Found 2809588 records. Version: Initializing class FileOut $Revision: 2530 $ Info: chr15.part.interval.gz 122660 Info: chr14.part.interval.gz 104291 Info: chr13.part.interval.gz 113815 Info: chr17_random.part.interval.gz 445 Info: chr12.part.interval.gz 114113 Info: chr11.part.interval.gz 215575 Info: chrY_random.part.interval.gz 5595 Info: chr10.part.interval.gz 142542 Info: chr4_random.part.interval.gz 160 Info: chrUn_random.part.interval.gz 4144 Info: chrY.part.interval.gz 425 Info: chrX.part.interval.gz 45122 Info: chrX_random.part.interval.gz 202 Info: chr3_random.part.interval.gz 8 Info: chrM.part.interval.gz 187 Info: chr1_random.part.interval.gz 927 Info: chr9_random.part.interval.gz 495 Info: chr13_random.part.interval.gz 252 Info: chr7_random.part.interval.gz 39 Info: chr9.part.interval.gz 161824 Info: chr8.part.interval.gz 155146 Info: chr8_random.part.interval.gz 558 Info: chr7.part.interval.gz 176613 Info: chr6.part.interval.gz 139808 Info: chr5.part.interval.gz 193425 Info: chr4.part.interval.gz 206376 Info: chr3.part.interval.gz 118648 Info: chr2.part.interval.gz 221687 Info: chr1.part.interval.gz 168646 Info: chr5_random.part.interval.gz 41 Info: chr19.part.interval.gz 82374 Info: chr18.part.interval.gz 85058 Info: chr17.part.interval.gz 137922 Info: chr16.part.interval.gz 90465